View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12866_high_2 (Length: 321)

Name: NF12866_high_2
Description: NF12866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12866_high_2
NF12866_high_2
[»] chr8 (36 HSPs)
chr8 (237-321)||(13367009-13367093)
chr8 (221-306)||(2421236-2421321)
chr8 (237-321)||(35943981-35944065)
chr8 (235-303)||(20308696-20308764)
chr8 (235-303)||(21095329-21095397)
chr8 (237-320)||(36070252-36070335)
chr8 (237-303)||(8095437-8095503)
chr8 (221-295)||(19913591-19913665)
chr8 (240-302)||(16363774-16363836)
chr8 (237-302)||(44606231-44606296)
chr8 (237-301)||(37324647-37324711)
chr8 (246-321)||(7486150-7486225)
chr8 (241-304)||(8395085-8395148)
chr8 (246-304)||(44103264-44103322)
chr8 (249-306)||(39220767-39220824)
chr8 (249-309)||(36756149-36756209)
chr8 (246-306)||(36938769-36938829)
chr8 (244-303)||(31871486-31871545)
chr8 (246-321)||(37276211-37276286)
chr8 (246-321)||(39546645-39546720)
chr8 (255-306)||(45194571-45194622)
chr8 (250-320)||(117122-117192)
chr8 (237-306)||(24069405-24069474)
chr8 (271-320)||(37274961-37275010)
chr8 (238-303)||(37472494-37472559)
chr8 (246-294)||(21961923-21961971)
chr8 (277-321)||(31625383-31625427)
chr8 (281-321)||(38591010-38591050)
chr8 (271-306)||(36940026-36940061)
chr8 (277-315)||(1570205-1570243)
chr8 (118-179)||(8395210-8395272)
chr8 (221-294)||(39515299-39515372)
chr8 (246-294)||(10052204-10052252)
chr8 (246-294)||(13363546-13363594)
chr8 (246-294)||(21670164-21670212)
chr8 (277-321)||(41867915-41867959)
[»] scaffold0122 (1 HSPs)
scaffold0122 (221-320)||(16019-16118)
[»] chr2 (28 HSPs)
chr2 (237-321)||(14509282-14509366)
chr2 (241-302)||(28109832-28109893)
chr2 (237-309)||(4829550-4829622)
chr2 (238-302)||(7490155-7490219)
chr2 (237-301)||(25570829-25570893)
chr2 (237-306)||(7037054-7037123)
chr2 (237-306)||(10367327-10367396)
chr2 (237-306)||(12959664-12959733)
chr2 (221-293)||(35799613-35799685)
chr2 (237-295)||(11575445-11575503)
chr2 (237-303)||(37868999-37869065)
chr2 (118-179)||(42249623-42249685)
chr2 (241-297)||(8537109-8537165)
chr2 (237-297)||(15850618-15850678)
chr2 (247-309)||(32614470-32614532)
chr2 (242-304)||(42249746-42249808)
chr2 (246-294)||(14714592-14714640)
chr2 (246-321)||(23177747-23177822)
chr2 (246-321)||(23589004-23589079)
chr2 (246-293)||(26205114-26205161)
chr2 (118-173)||(37868878-37868934)
chr2 (246-301)||(3532287-3532342)
chr2 (271-309)||(1624969-1625007)
chr2 (246-304)||(7983663-7983721)
chr2 (118-179)||(35799728-35799789)
chr2 (246-303)||(12852977-12853034)
chr2 (277-321)||(2581876-2581920)
chr2 (246-294)||(4512206-4512254)
[»] chr6 (21 HSPs)
chr6 (237-303)||(14328733-14328799)
chr6 (237-303)||(14421743-14421809)
chr6 (237-303)||(293599-293665)
chr6 (241-303)||(9927696-9927758)
chr6 (236-302)||(31738455-31738521)
chr6 (224-321)||(27440121-27440218)
chr6 (118-178)||(16268757-16268818)
chr6 (237-300)||(2130877-2130940)
chr6 (118-179)||(9927821-9927883)
chr6 (119-179)||(293481-293542)
chr6 (246-306)||(18139455-18139515)
chr6 (118-168)||(31738590-31738641)
chr6 (275-309)||(8411171-8411205)
chr6 (240-306)||(22298692-22298758)
chr6 (241-302)||(16268633-16268694)
chr6 (277-321)||(8412315-8412359)
chr6 (271-318)||(33807765-33807812)
chr6 (221-291)||(12773173-12773243)
chr6 (271-321)||(22299896-22299946)
chr6 (118-155)||(22298840-22298877)
chr6 (271-320)||(27438864-27438913)
[»] chr5 (25 HSPs)
chr5 (221-304)||(38471379-38471462)
chr5 (221-321)||(2167458-2167557)
chr5 (237-303)||(5383033-5383099)
chr5 (238-306)||(40058106-40058174)
chr5 (237-302)||(12830897-12830962)
chr5 (237-302)||(12862877-12862942)
chr5 (238-306)||(19525248-19525316)
chr5 (118-179)||(38471505-38471567)
chr5 (221-321)||(42510187-42510287)
chr5 (221-304)||(223316-223399)
chr5 (244-306)||(22819483-22819545)
chr5 (221-303)||(32734222-32734304)
chr5 (237-306)||(12933839-12933908)
chr5 (237-309)||(12947997-12948069)
chr5 (271-321)||(15613578-15613628)
chr5 (237-306)||(15856621-15856690)
chr5 (246-306)||(41906366-41906426)
chr5 (248-303)||(26912308-26912363)
chr5 (118-168)||(32734357-32734408)
chr5 (271-306)||(42979536-42979571)
chr5 (275-317)||(8762397-8762439)
chr5 (271-304)||(5384339-5384372)
chr5 (251-304)||(5977046-5977099)
chr5 (277-318)||(15614959-15615000)
chr5 (275-303)||(10084689-10084717)
[»] chr7 (31 HSPs)
chr7 (237-321)||(46458672-46458756)
chr7 (236-320)||(27899172-27899256)
chr7 (118-179)||(131838-131900)
chr7 (241-306)||(26406213-26406278)
chr7 (251-303)||(43930410-43930462)
chr7 (244-309)||(13286960-13287025)
chr7 (238-295)||(25154896-25154953)
chr7 (241-304)||(131962-132025)
chr7 (235-304)||(24872080-24872149)
chr7 (246-303)||(38406109-38406166)
chr7 (237-297)||(35484269-35484329)
chr7 (248-306)||(4857289-4857347)
chr7 (237-303)||(10256214-10256280)
chr7 (246-306)||(14109039-14109099)
chr7 (246-306)||(14418996-14419056)
chr7 (241-304)||(33459506-33459569)
chr7 (249-306)||(49162325-49162382)
chr7 (246-306)||(44113517-44113577)
chr7 (277-321)||(46674933-46674977)
chr7 (246-293)||(24495019-24495066)
chr7 (221-280)||(28325186-28325245)
chr7 (275-309)||(22744831-22744865)
chr7 (118-179)||(33459382-33459444)
chr7 (275-321)||(35127883-35127929)
chr7 (271-321)||(47163226-47163276)
chr7 (277-321)||(19279611-19279655)
chr7 (277-309)||(22060548-22060580)
chr7 (277-321)||(22061794-22061838)
chr7 (277-321)||(22746319-22746363)
chr7 (277-321)||(36702949-36702993)
chr7 (271-303)||(43936133-43936165)
[»] chr1 (35 HSPs)
chr1 (237-321)||(21277067-21277151)
chr1 (237-303)||(51726803-51726869)
chr1 (237-321)||(14169692-14169776)
chr1 (118-179)||(38281047-38281109)
chr1 (237-304)||(8092688-8092755)
chr1 (235-306)||(36509899-36509970)
chr1 (236-297)||(45570415-45570476)
chr1 (221-309)||(13930618-13930706)
chr1 (221-321)||(19466148-19466248)
chr1 (229-304)||(2972959-2973034)
chr1 (246-321)||(49141464-49141539)
chr1 (244-304)||(26802033-26802093)
chr1 (246-310)||(52742944-52743008)
chr1 (246-309)||(9415709-9415772)
chr1 (246-321)||(26056115-26056190)
chr1 (246-304)||(9633865-9633923)
chr1 (240-306)||(13642519-13642585)
chr1 (122-178)||(2972852-2972909)
chr1 (260-321)||(22167852-22167913)
chr1 (243-288)||(38280939-38280984)
chr1 (246-294)||(37624538-37624586)
chr1 (240-304)||(40109451-40109515)
chr1 (277-309)||(47136686-47136718)
chr1 (256-303)||(14071181-14071228)
chr1 (271-321)||(13641330-13641380)
chr1 (248-302)||(24517584-24517638)
chr1 (264-306)||(40811283-40811325)
chr1 (246-292)||(51218934-51218980)
chr1 (277-306)||(3979312-3979341)
chr1 (118-155)||(13642400-13642437)
chr1 (247-303)||(14764320-14764376)
chr1 (277-321)||(14765093-14765137)
chr1 (277-309)||(25787163-25787195)
chr1 (246-294)||(27689383-27689431)
chr1 (277-321)||(47411447-47411491)
[»] chr3 (27 HSPs)
chr3 (237-303)||(23559910-23559976)
chr3 (248-306)||(25583202-25583260)
chr3 (237-303)||(35174341-35174407)
chr3 (237-302)||(12062343-12062408)
chr3 (221-303)||(48867373-48867455)
chr3 (241-304)||(26798869-26798932)
chr3 (118-179)||(26798744-26798806)
chr3 (118-179)||(48867273-48867335)
chr3 (246-294)||(17350070-17350118)
chr3 (249-321)||(53808391-53808463)
chr3 (239-321)||(51400288-51400370)
chr3 (237-306)||(21128013-21128082)
chr3 (277-321)||(2124102-2124146)
chr3 (271-319)||(7820465-7820513)
chr3 (246-306)||(11219518-11219578)
chr3 (246-294)||(39133117-39133165)
chr3 (255-302)||(8371312-8371359)
chr3 (271-306)||(47855331-47855366)
chr3 (275-321)||(10987650-10987696)
chr3 (271-321)||(29537135-29537185)
chr3 (248-294)||(32979188-32979234)
chr3 (118-179)||(49333196-49333258)
chr3 (271-304)||(47854577-47854610)
chr3 (246-294)||(7483493-7483541)
chr3 (221-273)||(40364443-40364495)
chr3 (277-321)||(41387432-41387476)
chr3 (277-317)||(43103295-43103335)
[»] scaffold0003 (2 HSPs)
scaffold0003 (224-321)||(47143-47240)
scaffold0003 (271-320)||(48449-48498)
[»] chr4 (45 HSPs)
chr4 (224-303)||(17319133-17319212)
chr4 (237-303)||(6140319-6140385)
chr4 (221-303)||(11114923-11115005)
chr4 (237-303)||(50530594-50530660)
chr4 (237-306)||(28102164-28102233)
chr4 (245-321)||(15787025-15787101)
chr4 (221-321)||(34438479-34438579)
chr4 (246-321)||(86876-86951)
chr4 (237-304)||(31712465-31712532)
chr4 (229-279)||(40144651-40144701)
chr4 (118-179)||(48207558-48207620)
chr4 (242-304)||(48207681-48207743)
chr4 (244-309)||(17494212-17494277)
chr4 (132-179)||(11114833-11114880)
chr4 (241-303)||(38370373-38370436)
chr4 (221-304)||(38555219-38555302)
chr4 (252-321)||(11094599-11094668)
chr4 (237-306)||(29663730-29663799)
chr4 (250-303)||(39592261-39592314)
chr4 (271-321)||(15446663-15446713)
chr4 (118-179)||(17319259-17319321)
chr4 (122-179)||(40144754-40144812)
chr4 (252-321)||(35787869-35787938)
chr4 (240-301)||(41349487-41349548)
chr4 (249-306)||(44159173-44159230)
chr4 (277-321)||(26788595-26788639)
chr4 (277-321)||(33377363-33377407)
chr4 (277-309)||(44128333-44128365)
chr4 (248-320)||(44302794-44302866)
chr4 (118-168)||(6140199-6140250)
chr4 (271-321)||(15787495-15787545)
chr4 (271-321)||(33376291-33376341)
chr4 (118-179)||(50530718-50530780)
chr4 (239-321)||(52660175-52660257)
chr4 (221-303)||(56296284-56296366)
chr4 (237-302)||(3533567-3533632)
chr4 (272-321)||(34439654-34439703)
chr4 (237-306)||(38418976-38419045)
chr4 (237-306)||(43419334-43419403)
chr4 (237-306)||(56000375-56000444)
chr4 (277-321)||(5687248-5687292)
chr4 (277-321)||(38417626-38417670)
chr4 (251-303)||(41401677-41401729)
chr4 (246-306)||(47668565-47668625)
chr4 (277-309)||(55953851-55953883)
[»] scaffold0178 (2 HSPs)
scaffold0178 (238-304)||(1301-1367)
scaffold0178 (118-179)||(1424-1486)
[»] scaffold1974 (1 HSPs)
scaffold1974 (246-321)||(596-671)
[»] scaffold1878 (1 HSPs)
scaffold1878 (246-321)||(603-678)
[»] scaffold0290 (1 HSPs)
scaffold0290 (246-321)||(9446-9521)
[»] scaffold2127 (1 HSPs)
scaffold2127 (277-309)||(514-546)
[»] scaffold0015 (1 HSPs)
scaffold0015 (246-294)||(207766-207814)
[»] scaffold0007 (1 HSPs)
scaffold0007 (275-309)||(145866-145900)
[»] scaffold0098 (1 HSPs)
scaffold0098 (246-303)||(40999-41056)
[»] scaffold0051 (1 HSPs)
scaffold0051 (271-303)||(22218-22250)


Alignment Details
Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 13367009 - 13367093
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||    
T  13367009 ctataaagttggttcaccttagacatttaaggttaaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggac 13367093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 221 - 306
Target Start/End: Original strand, 2421236 - 2421321
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| |||||||||    
T  2421236 gtctatgatggaccatctataaagttggttcaccttagacatttaaggttaaaaactaacaaagaggaccaaaataataaacggca 2421321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 35944065 - 35943981
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||  ||||||||||    
T  35944065 ctataaagttggttcaccttagacatttaaagttaaaaactaacggagatgaccaaaatagtaaactgcataagatttatgggac 35943981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 20308764 - 20308696
Alignment:
Q  235 atctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  20308764 atctataaagttggttcaccttagacatttaaggttaaaaattaatggaaatgaccaaaatagtaaacg 20308696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 21095397 - 21095329
Alignment:
Q  235 atctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  21095397 atctataaagttggttcaccttagacatttaaggttaaaaattaatggaaatgaccaaaatagtaaacg 21095329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 237 - 320
Target Start/End: Complemental strand, 36070335 - 36070252
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| ||||||||||||||||||||||| ||  |||||||||    
T  36070335 ctataaagttggttcaccttagacatttaaggtcaaagactaacggggaggaccaaaatagtaaacggcagaagatttatggga 36070252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 8095503 - 8095437
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  8095503 ctataaagttggttcaccttagacatttaagattaaaaactaacggaaaggaccaaaatagtaaacg 8095437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 19913665 - 19913591
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaat 295  Q
    ||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  19913665 gtctatggtggaccatctataaagttggttcaccttagaaatttaaggttaaaaactaacggagaggaccaaaat 19913591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 16363774 - 16363836
Alignment:
Q  240 taaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  16363774 taaagttggttcaccttagacatttaaagttaataactaacggagaggaccaaaatagtaaac 16363836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 302
Target Start/End: Complemental strand, 44606296 - 44606231
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| |||||    
T  44606296 ctataaagttggttcaccttagacatttaaggttaaaaactaatggagaggatcaaaataataaac 44606231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 37324647 - 37324711
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaa 301  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||||    
T  37324647 ctataaagttggttcaccttagacatttaaagtgaaaaattaacggagagaaacaaaatagtaaa 37324711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 7486225 - 7486150
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| ||| ||  ||||||||||    
T  7486225 tggttcactttagacatttgatgttaaaaactaacggagaggaccaaaatagtaaacagcaaaagatttatgggac 7486150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 8395148 - 8395085
Alignment:
Q  241 aaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||||  |||  |||||||||||||||| ||||||||||||||||||| ||||||||    
T  8395148 aaagttggttcattttaaccatttaaggttaaaaactaacggagaggaccaaaatggtaaacgg 8395085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 44103264 - 44103322
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||| || ||||||    
T  44103264 tggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaagaggaaacgg 44103322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 39220824 - 39220767
Alignment:
Q  249 ttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||||||||||||||| |||| ||||  || ||||||||||||||||    
T  39220824 ttcaccttagacatttaaggttaaaaactaacagagataacgaaaatagtaaacggca 39220767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 309
Target Start/End: Complemental strand, 36756209 - 36756149
Alignment:
Q  249 ttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataa 309  Q
    ||||||||||| |||| | |||||||| ||||||||| ||||||||||||||||| |||||    
T  36756209 ttcaccttagaaatttgatgttaaaaactaacggagatgaccaaaatagtaaacgacataa 36756149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 36938829 - 36938769
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||| ||||| |||| | ||||||||||||| |||| ||||||||||||||||||||    
T  36938829 tggttcactttagatatttgatgttaaaaattaacagagaagaccaaaatagtaaacggca 36938769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 31871545 - 31871486
Alignment:
Q  244 gttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||| |||||||||| |||||||||||||| |||| || |||||||||||| ||||||    
T  31871545 gttggtccaccttagacgtttaaggttaaaaactaacagaaaggaccaaaataataaacg 31871486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 37276211 - 37276286
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||| ||| | |||||||| |||| ||||||||||| ||| ||||||||| ||  ||||||||||    
T  37276211 tggttcaccttagacttttgatgttaaaaactaacagagaggaccaatataataaacggcaaaagatttatgggac 37276286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 39546645 - 39546720
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||| |||| |||||| | |||||||| ||||||||| ||||||||  |||||||||||||  ||||||||||    
T  39546645 tggttcatcttaaacatttgatgttaaaaactaacggagatgaccaaaacggtaaacggcataatatttatgggac 39546720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 45194622 - 45194571
Alignment:
Q  255 ttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||||||||| |||||||||| ||||| || |||||||||||||||||    
T  45194622 ttagacatttaaggctaaaaattaatggagatgatcaaaatagtaaacggca 45194571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 117192 - 117122
Alignment:
Q  250 tcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||||||||||| | |||||||| |||||||||||||||||| | |||||| || ||  |||||||||    
T  117192 tcaccttagacatttgatgttaaaaactaacggagaggaccaaaacaataaacgacagaagatttatggga 117122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 24069405 - 24069474
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||| |||||| |||||||||||||||  ||||||||   ||||| ||||||||||| ||||||||||    
T  24069405 ctataatgttggtccaccttagacatttagtgttaaaaacagacggaaaggaccaaaatggtaaacggca 24069474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 37275010 - 37274961
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||| |||||||||||||||||||||||||||||| ||  |||||||||    
T  37275010 aaaaactaacggagaggaccaaaatagtaaacggcagaagatttatggga 37274961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 37472559 - 37472494
Alignment:
Q  238 tataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||| |||||   |||||||||||||||||||| || ||| ||||||||||| |||||||    
T  37472559 tataaagttgtttcacaacagacatttaaggttaaaaataaatggaaaggaccaaaatggtaaacg 37472494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 21961971 - 21961923
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||    
T  21961971 tggttcacctaagacatttgatgttaaaaactaacggagaggaccaaaa 21961923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 31625383 - 31625427
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||    
T  31625383 taacggagaggaccaaaatagtaaacggcaaaagatttatgggac 31625427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 38591010 - 38591050
Alignment:
Q  281 ggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  38591010 ggagaggaccaaaatagtaaacggcataagatttatgggac 38591050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 36940026 - 36940061
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||| ||||||||||||||||||||    
T  36940026 aaaaattaacggagatgaccaaaatagtaaacggca 36940061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 1570205 - 1570243
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaacttta 315  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  1570205 taacggagatgaccaaaatagtaaacggcataaaattta 1570243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 8395272 - 8395210
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaataga-tcctccatgatccaacaatcttcattt 179  Q
    ||||||||||||||||||  ||||||||| ||||| |||||||||||| ||| || |||||||    
T  8395272 ttaggtggttgtggttcaccataagctacgatagattcctccatgatcaaacgattttcattt 8395210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 39515372 - 39515299
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    ||||||||| ||| | |||||| |||||| |||||||||||||||  |||||||||  ||||| | ||||||||    
T  39515372 gtctatgatggaccacctataatgttggtccaccttagacatttagtgttaaaaatagacggaaatgaccaaaa 39515299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 10052252 - 10052204
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    ||||||| ||||||||||||| |||||||| ||| ||||| ||||||||    
T  10052252 tggttcatcttagacatttaatgttaaaaactaaaggagatgaccaaaa 10052204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 13363546 - 13363594
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    |||||||| ||||||||||   |||||||| ||||||||||||||||||    
T  13363546 tggttcactttagacatttggtgttaaaaactaacggagaggaccaaaa 13363594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 21670212 - 21670164
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    |||||||||||||| |||| | |||||||| ||||||||| ||||||||    
T  21670212 tggttcaccttagatatttgatgttaaaaactaacggagaagaccaaaa 21670164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 41867915 - 41867959
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||| ||||||  |||||||||||| ||||||||||    
T  41867915 taacggagaggactaaaataaaaaacggcataaaatttatgggac 41867959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 221 - 320
Target Start/End: Complemental strand, 16118 - 16019
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||| | ||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||    
T  16118 gtctatggtggaccatctataaagttggttcatcttagacatttaaggttaaaaactaacggagaggactaaaatagtaaacggcataaggtttatggga 16019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 14509366 - 14509282
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||    
T  14509366 ctataaagttggtttaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgacagaagatttatgggac 14509282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 28109832 - 28109893
Alignment:
Q  241 aaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  28109832 aaagttggttcaccttagacatttaaggttaaaaaataacggagaggaccaaaatggtaaac 28109893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 4829622 - 4829550
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataa 309  Q
    |||||||||||||| |||||||| ||||||||||||| | |||| |||||||||||||||||||||| |||||    
T  4829622 ctataaagttggtttaccttagatatttaaggttaaacactaacagagaggaccaaaatagtaaacgacataa 4829550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 7490155 - 7490219
Alignment:
Q  238 tataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  7490155 tataaagtttgttcaccttagacatttaaggttaaaaactaacggataagaccaaaatagtaaac 7490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 25570829 - 25570893
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaa 301  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||    
T  25570829 ctataaagttggttcaccttagacatttaagtttaaaaactaacggaaaggactaaaatagtaaa 25570893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 7037123 - 7037054
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||| ||||||||||    
T  7037123 ctataaagttgattcaccttagatatttaaggttaaaaataaacggaaatgaccaaaatggtaaacggca 7037054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 10367396 - 10367327
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||  ||||||||||    
T  10367396 ctataaagttggttcaccttagacatttaaggttaaaaacaaacggagacgactaaaaaggtaaacggca 10367327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 12959664 - 12959733
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||||||||||||||||||||||||| |  ||||||||||| |||||  ||||||||||    
T  12959664 ctataaagttggttcaccttagacatttaaggttaaagacaaacggagaggatcaaaaaggtaaacggca 12959733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 35799685 - 35799613
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaa 293  Q
    ||||||| ||||| |  |||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  35799685 gtctatggtagaccacttataaagttgattcaccttagacatttaaggttaaaagctaacggagaggaccaaa 35799613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 11575445 - 11575503
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaat 295  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||    
T  11575445 ctataaagttgattcaccttagacatttaaggttaaaaacaaacggaaaggaccaaaat 11575503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 37868999 - 37869065
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||| ||||||||  |||||||    
T  37868999 ctataaagttggctcaccttagacatttaaggttaaaaacaaacggagaagaccaaaaaggtaaacg 37869065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 42249623 - 42249685
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaataga-tcctccatgatccaacaatcttcattt 179  Q
    |||||||||||| |||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  42249623 ttaggtggttgttgttcattataagctacaatagattcctccgtgatccaacaatcttcattt 42249685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 8537165 - 8537109
Alignment:
Q  241 aaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatag 297  Q
    ||||||||| || |||||||||||||||||||||| ||||||||| |||||||||||    
T  8537165 aaagttggtacatcttagacatttaaggttaaaaactaacggagatgaccaaaatag 8537109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 15850618 - 15850678
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatag 297  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||| || ||||||||||||    
T  15850618 ctataatgttggttcaccttagacatttagggttaaaaactaacgaagtggaccaaaatag 15850678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 32614532 - 32614470
Alignment:
Q  247 ggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataa 309  Q
    |||||||||||||||| ||||||||||||  |||||||||||| ||||| ||||||| |||||    
T  32614532 ggttcaccttagacatataaggttaaaaacaaacggagaggactaaaatggtaaacgacataa 32614470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 42249746 - 42249808
Alignment:
Q  242 aagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    |||||||||||||||||||||||||||||||||| |||| |||  ||||| ||| ||||||||    
T  42249746 aagttggttcaccttagacatttaaggttaaaaaataacagaggagaccacaattgtaaacgg 42249808  T

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Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 14714640 - 14714592
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  14714640 tggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaa 14714592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 23177822 - 23177747
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||| ||||||  ||| | |||||||| ||||||||||||||||||| |||||||||| ||  ||||||||||    
T  23177822 tggttcatcttagattttttatgttaaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggac 23177747  T

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Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 23589079 - 23589004
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||| ||||||  ||| | |||||||| ||||||||||||||||||| |||||||||| ||  ||||||||||    
T  23589079 tggttcatcttagattttttatgttaaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggac 23589004  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 26205161 - 26205114
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaa 293  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||    
T  26205161 tggttcaccttagacatttgatgttaaaaactaacggagaggaccaaa 26205114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 37868878 - 37868934
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaacaatct 173  Q
    ||||||| ||||| ||||| |||||||||||||||| ||| ||||||||||||||||    
T  37868878 ttaggtgtttgtgattcattataagctacaatagatcccttcatgatccaacaatct 37868934  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 3532342 - 3532287
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaa 301  Q
    |||||||||||| |||||||| ||||||||| ||| |||| ||| |||||||||||    
T  3532342 tggttcaccttaaacatttaatgttaaaaatcaacagagatgactaaaatagtaaa 3532287  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 1624969 - 1625007
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataa 309  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  1624969 aaaaattaacggagaagaccaaaatagtaaatggcataa 1625007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 7983663 - 7983721
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||||||||||| | |||||||||| ||| | ||||| |||| |||||||||    
T  7983663 tggttcaccttagacatttgatgttaaaaattgacgaaaaggactaaaacagtaaacgg 7983721  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 35799789 - 35799728
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagatcc-tccatgatccaacaatcttcattt 179  Q
    |||||||||||||||| || |||| ||||||| ||||| ||||||||||||||||||| ||||    
T  35799789 ttaggtggttgtggtttattataaactacaat-gatccctccatgatccaacaatcttaattt 35799728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 12853034 - 12852977
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||  ||| | |||||||  ||||||||| |||||||||||||||||    
T  12853034 tggttcaccttagatttttgatgttaaaatctaacggagatgaccaaaatagtaaacg 12852977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 2581920 - 2581876
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||| |||||||||||| |||  ||||||||||    
T  2581920 taacggagaggaccaagatagtaaacggcgtaagatttatgggac 2581876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 4512254 - 4512206
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    |||||||||||||| |||| | |||||||| ||| ||||||||||||||    
T  4512254 tggttcaccttagatatttgatgttaaaaactaatggagaggaccaaaa 4512206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 14328733 - 14328799
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14328733 ctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacg 14328799  T

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Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 14421743 - 14421809
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14421743 ctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacg 14421809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 293599 - 293665
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  293599 ctataaagttggttcaccttagacatttaaggttaaaaataaacggagaggaccaaaatggtaaacg 293665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 9927758 - 9927696
Alignment:
Q  241 aaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9927758 aaagttggttcatcttagacatttaaggttaaaaattaacggagatgaccaaaatagtaaacg 9927696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 31738521 - 31738455
Alignment:
Q  236 tctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  31738521 tctataaagttggttcacattagacatttaaggttaaaaactaacggagaggaccaaaatggtaaac 31738455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 224 - 321
Target Start/End: Original strand, 27440121 - 27440218
Alignment:
Q  224 tatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||| ||||| | ||| ||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||  ||||||||||    
T  27440121 tatggtagaccacctacaaagttaattcaccttagacatttaaagttaaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggac 27440218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 16268818 - 16268757
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaacaatcttcatt 178  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  16268818 ttaggtggttgtggttcattataagctaaaatagatccctccatgatccaacaatcttcatt 16268757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 2130940 - 2130877
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaa 300  Q
    |||||||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||    
T  2130940 ctataaaggtggttcaccttagatatttaaggttaaatactaagggagaggaccaaaatagtaa 2130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 9927883 - 9927821
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaacaatcttcattt 179  Q
    |||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  9927883 ttaggtggttgtagttcattatatgctacaatagatacctccatgatccaacaatcttcattt 9927821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 293481 - 293542
Alignment:
Q  119 taggtggttgtggttcatgataagctacaatagatc-ctccatgatccaacaatcttcattt 179  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||| |||||    
T  293481 taggtgtttgtggttcattataagctacaatagatctctccatgatccaacgatctccattt 293542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 18139455 - 18139515
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||||||| | |||||||| ||| |||||||||||||| | |||||||||    
T  18139455 tggttcaccttagacatttgatgttaaaaactaatggagaggaccaaaacaataaacggca 18139515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 31738641 - 31738590
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagatc-ctccatgatccaac 168  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||    
T  31738641 ttaggtgtttgtggttcattataagctacaatagatctctccatgatccaac 31738590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 8411205 - 8411171
Alignment:
Q  275 attaacggagaggaccaaaatagtaaacggcataa 309  Q
    |||||||||||||||||||||||||||||||||||    
T  8411205 attaacggagaggaccaaaatagtaaacggcataa 8411171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 22298758 - 22298692
Alignment:
Q  240 taaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||| || ||||||||||||||||||||||||| |||||||   |||||||||  |||||||||    
T  22298758 taaagttcgtccaccttagacatttaaggttaaaaactaacggaagagaccaaaattataaacggca 22298692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 302
Target Start/End: Complemental strand, 16268694 - 16268633
Alignment:
Q  241 aaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    ||||||||||||| |||||||||||||||||| || ||||  ||||||||| | ||||||||    
T  16268694 aaagttggttcacgttagacatttaaggttaataactaactaagaggaccacattagtaaac 16268633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 8412315 - 8412359
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||    
T  8412315 taacggagaggaccaaaatagtaaacggcacaagatttatgggac 8412359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 318
Target Start/End: Complemental strand, 33807812 - 33807765
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatgg 318  Q
    ||||||||||||||||||||||||  |||||||||| ||| |||||||    
T  33807812 aaaaattaacggagaggaccaaaacggtaaacggcagaaaatttatgg 33807765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 12773243 - 12773173
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggacca 291  Q
    ||||||| | |||| |||| || |||| | ||||||||||||||||||||||||| | ||||| |||||||    
T  12773243 gtctatggtggacagtctacaatgttgatccaccttagacatttaaggttaaaaactgacggaaaggacca 12773173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 22299896 - 22299946
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||| ||||||||| |||||||||||||||||||| ||  ||||||||||    
T  22299896 aaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggac 22299946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 22298877 - 22298840
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagatcc 155  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  22298877 ttaggttgttgtggttcattataagctacaatagatcc 22298840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 27438913 - 27438864
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||||||||||| |||||||| ||||||||||| ||  |||||||||    
T  27438913 aaaaattaacggagatgaccaaaagagtaaacggcagaatatttatggga 27438864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 38471462 - 38471379
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  38471462 gtctatggtagaccacctataaagttggttcaccttaaacatttaaggttaaaaattaacagagagaaccaaaatagtaaacgg 38471379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 2167458 - 2167557
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||||||| ||  |||||||||    
T  2167458 gtctatggtggaccatctataaagttggttcaccttagacatttaaggttaaaaactaacagaga-gaccaaaataataaacggcagaagatttatggga 2167556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 5383099 - 5383033
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  5383099 ctataaagttgattcaccttagacatttaaggttaaaaactaacggagaggatcaaaatagtaaacg 5383033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 40058174 - 40058106
Alignment:
Q  238 tataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||    
T  40058174 tataaagttggttcaccttagacatttaagattaaaaactaacggagatgaccaaaatggtaaacggca 40058106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 12830897 - 12830962
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  12830897 ctataatgttggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaac 12830962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 12862877 - 12862942
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  12862877 ctataatgttggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaac 12862942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 19525248 - 19525316
Alignment:
Q  238 tataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||| ||||||||||    
T  19525248 tataaagttggttcaccatagaaatttaaggttaaaaacaaacggagaggaccaaaatggtaaacggca 19525316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 38471567 - 38471505
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaacaatcttcattt 179  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  38471567 ttaggtggttgtggttcattataagctacaatagatccctctatgatccaacaatcttcattt 38471505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 42510287 - 42510187
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||| | ||| ||| |||| ||| || |||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||  |||||||||    
T  42510287 gtctatggtggactatcaataatgttagtgcaccatagacatttgaggttaaaaactaacggagagaaccaaaatagtaaacggcagaagatttatggga 42510188  T
Q  321 c 321  Q
    |    
T  42510187 c 42510187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 223399 - 223316
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||| ||||| | ||| ||||||||||||||||||||||||||| ||||||| ||| ||| ||||||| | ||||||||||    
T  223399 gtctatggtagaccacctacaaagttggttcaccttagacatttaagattaaaaactaatggaaaggaccacattagtaaacgg 223316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 22819483 - 22819545
Alignment:
Q  244 gttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||||||||||| || || ||||||||| ||||||||| ||||||||||||||||||||    
T  22819483 gttggttcaccttagatatatagggttaaaaactaacggagatgaccaaaatagtaaacggca 22819545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 32734304 - 32734222
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||| | ||| |||||| ||| | |||||||||||| ||||||| ||||||| ||||||| | |||||||||||||||||    
T  32734304 gtctatggtggactatctattaaggttgttcaccttagatatttaagattaaaaactaacggaaatgaccaaaatagtaaacg 32734222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 12933908 - 12933839
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||| |||| | |||| |||||||||||||||| |||||| |||||| |||| ||||||||||    
T  12933908 ctataaagttgattcatcatagatatttaaggttaaaaataaacggaaaggaccgaaatggtaaacggca 12933839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 12948069 - 12947997
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataa 309  Q
    ||||||||||| |||| | |||| |||||||||||||||| |||||| |||||| |||| ||||||| |||||    
T  12948069 ctataaagttgattcatcatagatatttaaggttaaaaataaacggaaaggaccgaaatggtaaacgacataa 12947997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 15613628 - 15613578
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||||||||||||||||||||| | ||  ||||||||||    
T  15613628 aaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggac 15613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 15856690 - 15856621
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||| |||||| ||||||||||||||| |||||||||  |||| | | ||||||||| ||||||||||    
T  15856690 ctataatgttggtccaccttagacatttagggttaaaaacaaacgaaaatgaccaaaatggtaaacggca 15856621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 41906366 - 41906426
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||||||||| ||||| ||||||||| ||||| || ||||||||||||  |||||||    
T  41906366 tggttcaccttagatatttatggttaaaaactaacgaagtggaccaaaataggtaacggca 41906426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 303
Target Start/End: Original strand, 26912308 - 26912363
Alignment:
Q  248 gttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||| ||||||||||||||||||||| |||| ||| |||||| ||| |||||||    
T  26912308 gttcacattagacatttaaggttaaaaaataacagaggggaccacaattgtaaacg 26912363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 32734408 - 32734357
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaac 168  Q
    ||||||| |||||||| || |||||||||||||||| |||||||||||||||    
T  32734408 ttaggtgtttgtggtttattataagctacaatagatccctccatgatccaac 32734357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 42979571 - 42979536
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||| |||||||||||||||||||||||||||||    
T  42979571 aaaaatcaacggagaggaccaaaatagtaaacggca 42979536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 8762397 - 8762439
Alignment:
Q  275 attaacggagaggaccaaaatagtaaacggcataaactttatg 317  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||    
T  8762397 attaacggagaggactaaaatagtaaacgacataaaatttatg 8762439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 304
Target Start/End: Original strand, 5384339 - 5384372
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||| ||||||||||||||||||||||||||||    
T  5384339 aaaaactaacggagaggaccaaaatagtaaacgg 5384372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 5977046 - 5977099
Alignment:
Q  251 caccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||||||||| ||||||| |||| || ||||||| | ||||||||||    
T  5977046 caccttagacatttaagattaaaaactaacagaaaggaccacattagtaaacgg 5977099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 15614959 - 15615000
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgg 318  Q
    |||| ||||||||||||||||||||||||| ||| |||||||    
T  15614959 taacagagaggaccaaaatagtaaacggcagaaaatttatgg 15615000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 303
Target Start/End: Complemental strand, 10084717 - 10084689
Alignment:
Q  275 attaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||||||||||||||||||||    
T  10084717 attaacggagaggaccaaaatagtaaacg 10084689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 46458672 - 46458756
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||| | ||  ||||||||||    
T  46458672 ctataaagttggttcaccttagacatttaaggttaaaaacaaacggagaggaccaaaatggtaaacggaagaagatttatgggac 46458756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 320
Target Start/End: Original strand, 27899172 - 27899256
Alignment:
Q  236 tctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||| || ||  |||||||||    
T  27899172 tctataaagttggttcaccttagatatttaaggttaaaaactaacggataagaccaaaatagtaaacgacaaaagatttatggga 27899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 131838 - 131900
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagatc-ctccatgatccaacaatcttcattt 179  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  131838 ttaggtggttgtggttcattataagctacaatagatctctccatgatccaacaatcttcattt 131900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 26406278 - 26406213
Alignment:
Q  241 aaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||  |||||||||    
T  26406278 aaagttggttcaccttagacatttaaggttaaaaaataacggagatgaccaaaatgttaaacggca 26406213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 43930462 - 43930410
Alignment:
Q  251 caccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43930462 caccttagacatttaaggttaaaaattaacagagaggaccaaaatagtaaacg 43930410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 13286960 - 13287025
Alignment:
Q  244 gttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataa 309  Q
    |||| |||| |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  13286960 gttgtttcatcttagacatttaaggttaaaaactaacgaagaggaccaaaatagtaaacagcataa 13287025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 25154896 - 25154953
Alignment:
Q  238 tataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaat 295  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  25154896 tataaagttggttcaccttagacatttaaggttaaaaacaaacggagatgaccaaaat 25154953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 304
Target Start/End: Original strand, 131962 - 132025
Alignment:
Q  241 aaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| || || | ||||||||||    
T  131962 aaagttggttcaccttagacatttaaggttaaaaactaacggagatgatcacattagtaaacgg 132025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 24872149 - 24872080
Alignment:
Q  235 atctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||||| |||||| ||||||||||||||||||||  |||||| |||| |||||| ||||||||    
T  24872149 atctataaagttgattcaccatagacatttaaggttaaaaacaaacggaaaggatcaaaatggtaaacgg 24872080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 38406166 - 38406109
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||||    
T  38406166 tggttcaccttagacatttgatgttaaaaattaacggaaaggaccaaaacagtaaacg 38406109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 35484269 - 35484329
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatag 297  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||| || ||||||||||||    
T  35484269 ctataatgttggttcaccttagacatttagggttaaaaactaacgaagtggaccaaaatag 35484329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 4857347 - 4857289
Alignment:
Q  248 gttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||||| | |||||||| ||||||||||||| |||| |||||||||||    
T  4857347 gttcaccttagacatttgatgttaaaaactaacggagaggactaaaacagtaaacggca 4857289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 10256280 - 10256214
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||||||||||||||| |||||||||||||||||   || | |||||||||| ||||||    
T  10256280 ctataaagttggttcaccttagacttttaaggttaaaaattactagaaatgaccaaaatactaaacg 10256214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 14109039 - 14109099
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||  ||||||||||    
T  14109039 tggttcaccttagacatttgatgttaaaaactaacggagaggactaaaacggtaaacggca 14109099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 14418996 - 14419056
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||  ||||||||||    
T  14418996 tggttcaccttagacatttgatgttaaaaactaacggagaggactaaaacggtaaacggca 14419056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 304
Target Start/End: Original strand, 33459506 - 33459569
Alignment:
Q  241 aaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||||||||||||| ||||||||||||| |||| || | ||||| | ||||||||||    
T  33459506 aaagttggttcaccttagacagttaaggttaaaaactaacagaaaagaccacattagtaaacgg 33459569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 49162382 - 49162325
Alignment:
Q  249 ttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||| |||||| ||||||||||||||| ||||| || |||||||||||| ||||||||    
T  49162382 ttcatcttagatatttaaggttaaaaactaacgaagtggaccaaaataggaaacggca 49162325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 44113577 - 44113517
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||||||||| ||||| ||||||||| ||||| || ||||||||||||  |||||||    
T  44113577 tggttcaccttagatatttatggttaaaaactaacgaagtggaccaaaataggtaacggca 44113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 46674933 - 46674977
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||    
T  46674933 taacggagaggaccaaaatagtaaacggcaaaagatttatgggac 46674977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 24495019 - 24495066
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaa 293  Q
    |||||||| |||||||||| | |||||||| |||||||||||||||||    
T  24495019 tggttcactttagacatttgatgttaaaaactaacggagaggaccaaa 24495066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 28325245 - 28325186
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaac 280  Q
    ||||||| ||||| | ||| ||||||||| ||||||||||||||||| ||||||| ||||    
T  28325245 gtctatggtagaccacctacaaagttggtccaccttagacatttaagattaaaaactaac 28325186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 22744865 - 22744831
Alignment:
Q  275 attaacggagaggaccaaaatagtaaacggcataa 309  Q
    ||||||||||| |||||||||||||||||||||||    
T  22744865 attaacggagaagaccaaaatagtaaacggcataa 22744831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 33459382 - 33459444
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagatc-ctccatgatccaacaatcttcattt 179  Q
    |||||||||||||||| || ||||| || |||||||| ||| |||||||||||||||| ||||    
T  33459382 ttaggtggttgtggtttattataagttaaaatagatctctctatgatccaacaatcttaattt 33459444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 35127929 - 35127883
Alignment:
Q  275 attaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||| ||| |||||||||||||||||||||||  ||||||||||    
T  35127929 attaacgaagatgaccaaaatagtaaacggcataagatttatgggac 35127883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 47163276 - 47163226
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||| |||||||||||||||||||||||||||| | ||  ||||||||||    
T  47163276 aaaaactaacggagaggaccaaaatagtaaacggaaaaagatttatgggac 47163226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 19279611 - 19279655
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||| ||||||||||||||||||| || ||| ||||||||||    
T  19279611 taacggaaaggaccaaaatagtaaacgacaaaaaatttatgggac 19279655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 22060580 - 22060548
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataa 309  Q
    ||||||||| |||||||||||||||||||||||    
T  22060580 taacggagatgaccaaaatagtaaacggcataa 22060548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 22061794 - 22061838
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||| ||| |||||||||||||||||||  ||||||||||    
T  22061794 taacggagaagactaaaatagtaaacggcataagatttatgggac 22061838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 22746319 - 22746363
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||| ||||||||||||||||| ||  ||||||||||    
T  22746319 taacggagaggatcaaaatagtaaacggcacaagatttatgggac 22746363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 36702949 - 36702993
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||| |||||||||||||||||||||| ||  ||||||||||    
T  36702949 taacggaaaggaccaaaatagtaaacggcagaatatttatgggac 36702993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 303
Target Start/End: Original strand, 43936133 - 43936165
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||| |||||||||||||||||||||||||||    
T  43936133 aaaaactaacggagaggaccaaaatagtaaacg 43936165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 9e-24; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 21277151 - 21277067
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||| ||  ||||||||||    
T  21277151 ctataaagttggttcaccttagacatttaaggtcaaaaactaatggagaggatcaaaatagtaaacggcagaagatttatgggac 21277067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 51726803 - 51726869
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  51726803 ctataaagttggttcaccttagacatttaaggttaaaaactaacggtgaggactaaaatagtaaacg 51726869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 14169776 - 14169692
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||||||||| || ||  ||||||||||    
T  14169776 ctataaagttggttcaccttagacatttaaggttaaaaactaacagataagaccaaaatagtaaacgacaaaagatttatgggac 14169692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 38281109 - 38281047
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaacaatcttcattt 179  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  38281109 ttaggtggttgtggttcattataatctacaatagatccctccatgatccaacaatcttcattt 38281047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 304
Target Start/End: Complemental strand, 8092755 - 8092688
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||| |||||||||  |||||||||    
T  8092755 ctataaagttggttcaccttagatatttaaggttaaatactaacggaaaggaccaaatcagtaaacgg 8092688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 36509970 - 36509899
Alignment:
Q  235 atctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||| ||| || |||| ||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  36509970 atctataatgttagtccaccatagacatttgaggttaaaaactaacggagagaaccaaaatagtaaacggca 36509899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 45570476 - 45570415
Alignment:
Q  236 tctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatag 297  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||  || ||||||||||||    
T  45570476 tctataatgttggttcaccttagacatttagggttaaaaattaacaaagtggaccaaaatag 45570415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 13930618 - 13930706
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataa 309  Q
    ||||||| ||||| |  |||||||||| |||||  ||||||||||||||||||||  |||||| ||||||||||| ||||||| |||||    
T  13930618 gtctatggtagaccacatataaagttgtttcacaatagacatttaaggttaaaaacaaacggaaaggaccaaaatggtaaacgacataa 13930706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 19466148 - 19466248
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||| | ||| |||||||| ||| || |||| ||||||||| |||||||||| |||||||||| |||| ||||||||||| || ||  |||||||||    
T  19466148 gtctatggtggactatctataatgttagtccaccatagacatttgaggttaaaaactaacggagagaaccacaatagtaaacgacagaagatttatggga 19466247  T
Q  321 c 321  Q
    |    
T  19466248 c 19466248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 2972959 - 2973034
Alignment:
Q  229 tagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||| ||||| ||||||||| |||||||||||||||| |||||||| |||| || ||||||| | ||||||||||    
T  2972959 tagaccatctacaaagttggtacaccttagacatttaaagttaaaaactaacagaaaggaccacactagtaaacgg 2973034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 49141464 - 49141539
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||||||| | |||||||| ||||||||| ||| ||||| |||||||||| |||  |||||||||    
T  49141464 tggttcaccttagacatttgatgttaaaaactaacggagatgactaaaatggtaaacggcagaaaaattatgggac 49141539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 26802093 - 26802033
Alignment:
Q  244 gttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    |||||||||||||||||||||||| ||||||| |||| || ||||||| | ||||||||||    
T  26802093 gttggttcaccttagacatttaagattaaaaagtaacagaaaggaccatattagtaaacgg 26802033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 52742944 - 52743008
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaa 310  Q
    |||||||||||| |||||| | |||||||| ||||||||||||||| || |||||||| ||||||    
T  52742944 tggttcaccttaaacatttgatgttaaaaactaacggagaggaccataacagtaaacgacataaa 52743008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 9415772 - 9415709
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataa 309  Q
    |||||||||||||| ||||| ||||||||| ||||| || ||||||||||||  ||||||||||    
T  9415772 tggttcaccttagatatttatggttaaaaactaacgaagtggaccaaaataggtaacggcataa 9415709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 26056115 - 26056190
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||| |||||| ||| | |||||||  ||||||||||||||||||||||||||| || ||  ||||||||||    
T  26056115 tggttcactttagacttttgatgttaaaatctaacggagaggaccaaaatagtaaacgacaaaagatttatgggac 26056190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 9633923 - 9633865
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||||||||||| | |||||||| |||||||||||| |||||  ||||||||    
T  9633923 tggttcaccttagacatttgatgttaaaaactaacggagaggatcaaaactgtaaacgg 9633865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 13642519 - 13642585
Alignment:
Q  240 taaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||| || ||||||||||||||||||||||||| |||||||   |||||||||  |||||||||    
T  13642519 taaagttcgtccaccttagacatttaaggttaaaaactaacggaagagaccaaaattataaacggca 13642585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 2972852 - 2972909
Alignment:
Q  122 gtggttgtggttcatgataagctacaataga-tcctccatgatccaacaatcttcatt 178  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| ||||||||||||||||    
T  2972852 gtggttgtggttcattataaactacaatagattcctctatggtccaacaatcttcatt 2972909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 22167913 - 22167852
Alignment:
Q  260 catttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||| |||| ||||| ||||||||| ||||||||| ||  ||||||||||    
T  22167913 catttaaggttaaaaactaacagagagaaccaaaataataaacggcagaagatttatgggac 22167852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 38280984 - 38280939
Alignment:
Q  243 agttggttcaccttagacatttaaggttaaaaattaacggagagga 288  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||    
T  38280984 agttggttcaccttagacatttaaagttaaaaactgacggagagga 38280939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 37624538 - 37624586
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    |||||||| |||||||||| | |||||||| ||||||||||||||||||    
T  37624538 tggttcactttagacatttgatgttaaaaactaacggagaggaccaaaa 37624586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 40109515 - 40109451
Alignment:
Q  240 taaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    |||||||  ||||||||||||||||||| ||||||| |||| || ||||||| | ||||||||||    
T  40109515 taaagttacttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaacgg 40109451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 47136686 - 47136718
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataa 309  Q
    |||||||||||||||||||||||||||||||||    
T  47136686 taacggagaggaccaaaatagtaaacggcataa 47136718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 14071181 - 14071228
Alignment:
Q  256 tagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||    
T  14071181 tagacatttaaggttaaaaacaaacggaaaggaccaaaatggtaaacg 14071228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 13641380 - 13641330
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||| ||||||||| |||||||||||||||||||| ||  ||||||||||    
T  13641380 aaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggac 13641330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 24517584 - 24517638
Alignment:
Q  248 gttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    |||||||||||||||||||| ||||||| |||| || ||||||| | ||||||||    
T  24517584 gttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaac 24517638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 40811325 - 40811283
Alignment:
Q  264 taaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||||||| ||||||||| |||||||||| |||||||||    
T  40811325 taaggttaaaaactaacggagatgaccaaaataataaacggca 40811283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 51218934 - 51218980
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaa 292  Q
    |||||||| |||||||||| | |||||||| ||||||||||||||||    
T  51218934 tggttcactttagacatttgatgttaaaaactaacggagaggaccaa 51218980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 306
Target Start/End: Original strand, 3979312 - 3979341
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||||||||||||||||||    
T  3979312 taacggagaggaccaaaatagtaaacggca 3979341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 13642400 - 13642437
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagatcc 155  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  13642400 ttaggttgttgtggttcattataagctacaatagatcc 13642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 14764376 - 14764320
Alignment:
Q  247 ggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||| |||||||| |||||||| |||| |||| ||| |||| ||||||||    
T  14764376 ggttcaccttaaacatttaatgttaaaaactaacagagatgactaaaacagtaaacg 14764320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 14765093 - 14765137
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||| ||||||||||| ||| ||| ||||||||||    
T  14765093 taacggagaggaccgaaatagtaaactgcaaaaaatttatgggac 14765137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 25787163 - 25787195
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataa 309  Q
    ||||||||||||||||||||||||| |||||||    
T  25787163 taacggagaggaccaaaatagtaaatggcataa 25787195  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 27689431 - 27689383
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    |||||||| ||||||||||   |||||||| ||||||||||||||||||    
T  27689431 tggttcactttagacatttggtgttaaaaactaacggagaggaccaaaa 27689383  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 47411447 - 47411491
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||| | ||||||||||||||||||||  ||||||||||    
T  47411447 taacggagagaatcaaaatagtaaacggcataagatttatgggac 47411491  T

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Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 23559976 - 23559910
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  23559976 ctataaagttggttcatcttagacaattaaggttaaaaactaacggagaggaccaaaatagtaaacg 23559910  T

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Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 25583260 - 25583202
Alignment:
Q  248 gttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25583260 gttcgccttagacatttaaggttaaaaattaacagagaggaccaaaatagtaaacggca 25583202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 35174341 - 35174407
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || | |||||||||||||||||    
T  35174341 ctataaagttggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaatagtaaacg 35174407  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 12062343 - 12062408
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  12062343 ctataaagttggttcaccttagacatttaaggttaaaaactaatggaaatgaccaaaatagtaaac 12062408  T

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Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 48867373 - 48867455
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||| ||||| | ||| ||||||||||||||||||||||||||||||||||| |||| || ||||||| | |||||||||    
T  48867373 gtctatggtagaccacctacaaagttggttcaccttagacatttaaggttaaaaactaacagaaaggaccacattagtaaacg 48867455  T

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Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 304
Target Start/End: Original strand, 26798869 - 26798932
Alignment:
Q  241 aaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||| | |||  |||||||||||||||| ||||||||||||||||||| ||||||||    
T  26798869 aaagttggttcgctttaaccatttaaggttaaaaactaacggagaggaccaaaatggtaaacgg 26798932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 26798744 - 26798806
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaataga-tcctccatgatccaacaatcttcattt 179  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||| |||||| |||||||    
T  26798744 ttaggtggttgtggttcaccataagctacaatagattcctccatgatcaaacaattttcattt 26798806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 48867273 - 48867335
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaataga-tcctccatgatccaacaatcttcattt 179  Q
    |||||||||||||||| || |||||||||||||||  |||||||||| |||||||||||||||    
T  48867273 ttaggtggttgtggtttattataagctacaatagacccctccatgattcaacaatcttcattt 48867335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 17350070 - 17350118
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  17350070 tggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaa 17350118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 53808463 - 53808391
Alignment:
Q  249 ttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||| |||| | |||||||| ||| ||||| ||||||||||||||||| |||||  ||||||||||    
T  53808463 ttcaccttagaaatttgatgttaaaaactaatggagatgaccaaaatagtaaacgacataagatttatgggac 53808391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 51400370 - 51400288
Alignment:
Q  239 ataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||| ||| ||||||| |||||||||| ||||||||  |||||| ||||||||||| ||| |||||  ||| ||||||||||    
T  51400370 ataaaattgattcacctaagacatttaatgttaaaaacaaacggaaaggaccaaaatggtatacggctgaaaatttatgggac 51400288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 21128082 - 21128013
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||| |||||| ||||||||||||||| |||||||||   ||||| | ||||||||| ||||||||||    
T  21128082 ctataatgttggtccaccttagacatttagggttaaaaacagacggaaatgaccaaaatggtaaacggca 21128013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 2124146 - 2124102
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||    
T  2124146 taacggagatgaccaaaatagtaaacggcataagatttatgggac 2124102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 7820513 - 7820465
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatggg 319  Q
    ||||| |||||||||||||||||| |||||||| |||||| ||||||||    
T  7820513 aaaaactaacggagaggaccaaaacagtaaacgacataaaatttatggg 7820465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 11219578 - 11219518
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||||||  ||| | |||||||  ||||||||| ||||||||||||||||||||    
T  11219578 tggttcaccttagaattttgatgttaaaatctaacggagatgaccaaaatagtaaacggca 11219518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 39133165 - 39133117
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    ||||||||||||||||||| | |||||||| |||| |||||||||||||    
T  39133165 tggttcaccttagacatttgatgttaaaaactaacagagaggaccaaaa 39133117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 8371359 - 8371312
Alignment:
Q  255 ttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    ||||| |||| | |||||||| ||||||||||||||||||||||||||    
T  8371359 ttagatatttgatgttaaaaactaacggagaggaccaaaatagtaaac 8371312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 47855331 - 47855366
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||| ||||||||||||||||||||||||||||||    
T  47855331 aaaaaataacggagaggaccaaaatagtaaacggca 47855366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 10987650 - 10987696
Alignment:
Q  275 attaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||| |||||||||||||||  |||||||||||| ||||||||||    
T  10987650 attaacagagaggaccaaaataaaaaacggcataaaatttatgggac 10987696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 29537135 - 29537185
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||| ||||||||||||||||||| |||||||||| ||  ||||||||||    
T  29537135 aaaaactaacggagaggaccaaaattgtaaacggcagaagatttatgggac 29537185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 32979234 - 32979188
Alignment:
Q  248 gttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    ||||||||||| | ||||| |||||||| ||||||||||||||||||    
T  32979234 gttcaccttagtcttttaatgttaaaaactaacggagaggaccaaaa 32979188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 49333258 - 49333196
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaataga-tcctccatgatccaacaatcttcattt 179  Q
    ||||||| ||||| ||||| ||||||||||||||| |||| ||||||||||| |||| |||||    
T  49333258 ttaggtgtttgtgcttcattataagctacaatagactccttcatgatccaacgatctacattt 49333196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 304
Target Start/End: Complemental strand, 47854610 - 47854577
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||| ||||||||||||||||||||||||||||    
T  47854610 aaaaactaacggagaggaccaaaatagtaaacgg 47854577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 7483493 - 7483541
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    |||||||||||||| |||| | |||||||| ||||||||| ||||||||    
T  7483493 tggttcaccttagatatttgatgttaaaaactaacggagatgaccaaaa 7483541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 40364495 - 40364443
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaa 273  Q
    ||||||| | ||| |||||||| ||||||||||| ||||||||| ||||||||    
T  40364495 gtctatggtggactatctataatgttggttcaccatagacattttaggttaaa 40364443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 41387432 - 41387476
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||||||||||||||||  |||  ||||||||||    
T  41387432 taacggagaggaccaaaatagtaaacggtgtaaggtttatgggac 41387476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 43103295 - 43103335
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatg 317  Q
    ||||||| |||||||||||||||||||||| ||| ||||||    
T  43103295 taacggaaaggaccaaaatagtaaacggcagaaaatttatg 43103335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 224 - 321
Target Start/End: Complemental strand, 47240 - 47143
Alignment:
Q  224 tatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||| ||||| | ||| ||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||  ||||||||||    
T  47240 tatggtagaccacctacaaagttaattcaccttagacatttaaagttaaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggac 47143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 48449 - 48498
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||||||||||| |||||||| ||||||||||| ||  |||||||||    
T  48449 aaaaattaacggagatgaccaaaagagtaaacggcagaatatttatggga 48498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 17319212 - 17319133
Alignment:
Q  224 tatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||| | |||  |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||    
T  17319212 tatgatagaccacctaagaagttggttcaccttagacatttaaggttaaaaactaacggtgaagaccaaaatagtaaacg 17319133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 6140319 - 6140385
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||||||||||||    
T  6140319 ctataaagttggttcaccttagatatttaaggttaaaaactaacggaaatgaccaaaatagtaaacg 6140385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 11114923 - 11115005
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||| ||||| | ||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  11114923 gtctatggtagaccacctacaaagttggttcagcttagacatttaaggttaaaaactaacggagaggtccaaaatggtaaacg 11115005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 50530660 - 50530594
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || | |||||||||||||||||    
T  50530660 ctataaagttggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaatagtaaacg 50530594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 28102233 - 28102164
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||    
T  28102233 ctataaagttgattcaccttagacatttaaggttaaaaataaacggaaatgaccaaaatggtaaacggca 28102164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 15787101 - 15787025
Alignment:
Q  245 ttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || |||  ||||||||| |||  |||||||||    
T  15787101 ttggtgcaccttagacatttaaggttaaaaattaacggagaggatcataatgataaacggcagaaaagttatgggac 15787025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 34438579 - 34438479
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||| | ||| |||||||| ||| || |||| ||||||||| |||||||||| |||| ||||| ||||||||||||||||||| ||  |||||||||    
T  34438579 gtctatggtggactatctataatgttagtccaccatagacatttgaggttaaaaactaacagagagaaccaaaatagtaaacggcagaagatttatggga 34438480  T
Q  321 c 321  Q
    |    
T  34438479 c 34438479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 86951 - 86876
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||||||| | |||||||| ||||||||| |||||||| ||||||||||| ||  ||||||||||    
T  86951 tggttcaccttagacatttgatgttaaaaactaacggagaagaccaaaacagtaaacggcagaatatttatgggac 86876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 31712465 - 31712532
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||| ||||||||    
T  31712465 ctataaagttgattcaccttagatatttaaggttaaaaataaacggaaatgaccaaaatggtaaacgg 31712532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 40144701 - 40144651
Alignment:
Q  229 tagacaatctataaagttggttcaccttagacatttaaggttaaaaattaa 279  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  40144701 tagactatctataaagttggttcaccttaaacatttaaggttaaaaattaa 40144651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 48207558 - 48207620
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaacaatcttcattt 179  Q
    |||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  48207558 ttaggtggttgttgttcattataagctacaatagatccctccgtgatccaacaatcttcattt 48207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 48207681 - 48207743
Alignment:
Q  242 aagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |||||| ||| ||||||||    
T  48207681 aagttggttcaccttagacatttaaggttaaaaaataacagaggggaccacaattgtaaacgg 48207743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 17494277 - 17494212
Alignment:
Q  244 gttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataa 309  Q
    |||| ||||| ||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||    
T  17494277 gttgtttcacgttagacatttaaggttaaaaagtaacggagataaccaatatagtaaacggcataa 17494212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 11114833 - 11114880
Alignment:
Q  132 ttcatgataagctacaatagatcctccatgatccaacaatcttcattt 179  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  11114833 ttcattataagctacaatagaccctccatgatccaacaatcttcattt 11114880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 38370436 - 38370373
Alignment:
Q  241 aaagttggttcaccttagacattt-aaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  38370436 aaagttggttcaccttagtcattttaaggttaaaaactaacggagatgaccaaaatggtaaacg 38370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 38555219 - 38555302
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    ||||||| ||||| | ||| ||||||||||||||||||||||||||| ||||||| ||||||| | |||||   ||||||||||    
T  38555219 gtctatggtagaccacctacaaagttggttcaccttagacatttaagattaaaaactaacggaaatgaccacgttagtaaacgg 38555302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 11094668 - 11094599
Alignment:
Q  252 accttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||| | |||||||| ||||| |||||||||||| ||||||||||| ||| ||||| ||||    
T  11094668 accttagacatttgatgttaaaaactaacgaagaggaccaaaacagtaaacggcagaaaatttataggac 11094599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 29663799 - 29663730
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||| ||||||||||||||||||||||| ||||||| | |||||| | || |||||| ||||||||||    
T  29663799 ctataatgttggttcaccttagacatttaatgttaaaattaaacggaaaagatcaaaatggtaaacggca 29663730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 39592261 - 39592314
Alignment:
Q  250 tcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||    
T  39592261 tcaccttagacatttgatgttaaaaattaacggagagaaccaaaacagtaaacg 39592314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 15446663 - 15446713
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||| |||||||||||||||||||||||||||| | ||| ||||||||||    
T  15446663 aaaaactaacggagaggaccaaaatagtaaacggtagaaaatttatgggac 15446713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 17319321 - 17319259
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagatcc-tccatgatccaacaatcttcattt 179  Q
    ||||||| |||| |||||| |||||||| |||||| || ||||||||||||||||||||||||    
T  17319321 ttaggtgattgtagttcattataagctagaatagacccctccatgatccaacaatcttcattt 17319259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 40144812 - 40144754
Alignment:
Q  122 gtggttgtggttcatgataagctacaatagatc-ctccatgatccaacaatcttcattt 179  Q
    |||||||||||| || ||||||||||||||||| ||| || ||||||||||||||||||    
T  40144812 gtggttgtggtttattataagctacaatagatctctctataatccaacaatcttcattt 40144754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 35787938 - 35787869
Alignment:
Q  252 accttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||| | |||||||| ||||||||||||||||||  ||||||| || ||  ||||||||||    
T  35787938 accttagacatttgatgttaaaaactaacggagaggaccaaaacggtaaacgacagaagatttatgggac 35787869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 41349487 - 41349548
Alignment:
Q  240 taaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaa 301  Q
    ||||||| |||||||||||||||||||| ||||||| |||| || ||||||| | |||||||    
T  41349487 taaagttagttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaa 41349548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 44159230 - 44159173
Alignment:
Q  249 ttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||||||||| ||||| | ||||||| ||||||||| |||||||||| |||||||||    
T  44159230 ttcaccttagatatttaggattaaaaactaacggagatgaccaaaataataaacggca 44159173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 26788639 - 26788595
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||    
T  26788639 taacggagaggaccaaaatagtaaacggcagaagatttatgggac 26788595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 33377363 - 33377407
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||    
T  33377363 taacggagaggaccaaaatagtaaacggcagaagatttatgggac 33377407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 44128333 - 44128365
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataa 309  Q
    |||||||||||||||||||||||||||||||||    
T  44128333 taacggagaggaccaaaatagtaaacggcataa 44128365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 44302866 - 44302794
Alignment:
Q  248 gttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatggga 320  Q
    ||||||||||| | ||||| |||||||| |||||||||||||||||| ||  || |||| ||| |||||||||    
T  44302866 gttcaccttagtcttttaatgttaaaaactaacggagaggaccaaaagaggtaatggcagaaaatttatggga 44302794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 6140199 - 6140250
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaac 168  Q
    ||||||| |||||||| || |||||||||||||||| |||||||||||||||    
T  6140199 ttaggtgtttgtggtttattataagctacaatagatccctccatgatccaac 6140250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 15787495 - 15787545
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||| ||||||||||||||| |||||||||| |||  |||||||||    
T  15787495 aaaaattaatggagaggaccaaaatggtaaacggcaaaaaagttatgggac 15787545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 33376341 - 33376291
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||||||| ||||||||||||| || ||  ||||||||||    
T  33376341 aaaaattaacggagaggactaaaatagtaaacgacagaagatttatgggac 33376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 50530780 - 50530718
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaacaatcttcattt 179  Q
    ||||||| |||||||| || |||| ||||||||||| |||||||||||||||| ||| |||||    
T  50530780 ttaggtgtttgtggtttattataaactacaatagatccctccatgatccaacagtctccattt 50530718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 52660175 - 52660257
Alignment:
Q  239 ataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||| ||| ||||||| |||||||||||||||||||  ||| || | || |||||| |||||||||| ||  ||||||||||    
T  52660175 ataaaattgattcacctaagacatttaaggttaaaaacaaacagaaatgatcaaaatggtaaacggcagaagatttatgggac 52660257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 56296366 - 56296284
Alignment:
Q  221 gtctatgatagacaatctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||| ||||| | |||| | |||||| ||||||||||||||| |||||||||  |||||| |  |||||||| |||||||    
T  56296366 gtctatggtagaccacctatgatgttggtccaccttagacatttagggttaaaaacaaacggaaattaccaaaatggtaaacg 56296284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 3533567 - 3533632
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac 302  Q
    |||||| ||||||  ||||||||||||||  |||||||| | ||||| ||||||||||| ||||||    
T  3533567 ctataatgttggtcgaccttagacatttagtgttaaaaactgacggaaaggaccaaaatggtaaac 3533632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 34439654 - 34439703
Alignment:
Q  272 aaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||| ||||||||| |||||||||||||||||||| ||  ||||||||||    
T  34439654 aaaactaacggagatgaccaaaatagtaaacggcagaagatttatgggac 34439703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 38418976 - 38419045
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||||  ||||||| |||| || ||||| |||||||| ||||||||| ||| |||| |||||||||||    
T  38418976 ctataaatatggttcatcttaaacgtttaatgttaaaaactaacggagatgactaaaacagtaaacggca 38419045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 43419334 - 43419403
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||| |||||||||||||| ||||||| ||||||||| ||||| |   |||||||||||  |||||||    
T  43419334 ctataatgttggttcaccttatacatttatggttaaaaactaacgaaatagaccaaaataggtaacggca 43419403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 56000444 - 56000375
Alignment:
Q  237 ctataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    |||||| |||||| |||||||||||||||  |||||||| | | ||| | ||||||||| ||||||||||    
T  56000444 ctataatgttggtccaccttagacatttagtgttaaaaactgatggaaaagaccaaaatggtaaacggca 56000375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 5687292 - 5687248
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||| |||||||||||||||||||| ||  ||||||||||    
T  5687292 taacggagatgaccaaaatagtaaacggcaaaagatttatgggac 5687248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 38417670 - 38417626
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    |||||||||||||| |||||||||||| |||||  ||||||||||    
T  38417670 taacggagaggaccgaaatagtaaacgacataagatttatgggac 38417626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 41401677 - 41401729
Alignment:
Q  251 caccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    |||||||||||||| | |||||||||||| |||||||| |||||  |||||||    
T  41401677 caccttagacatttgatgttaaaaattaatggagaggatcaaaacggtaaacg 41401729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 47668565 - 47668625
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggca 306  Q
    ||||| |||||||| |||| | |||||||| |||| ||||||||||||| | |||||||||    
T  47668565 tggtttaccttagatatttgatgttaaaaactaacagagaggaccaaaacaataaacggca 47668625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 55953851 - 55953883
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataa 309  Q
    |||||| ||||||||||||||||||||||||||    
T  55953851 taacggggaggaccaaaatagtaaacggcataa 55953883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 1367 - 1301
Alignment:
Q  238 tataaagttggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacgg 304  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  1367 tataaagttggttcaccttaaacatttaaggttaaaaaataacggagaggaccacaattgtaaacgg 1301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 1486 - 1424
Alignment:
Q  118 ttaggtggttgtggttcatgataagctacaatagat-cctccatgatccaacaatcttcattt 179  Q
    |||||||||||| |||||| |||||||||||||||| ||||| ||||  ||||||||||||||    
T  1486 ttaggtggttgttgttcattataagctacaatagatccctccgtgattgaacaatcttcattt 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 596 - 671
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||  ||| | |||||||| ||||||||| ||||||||| |||||||||| ||  ||||||||||    
T  596 tggttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggac 671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 678 - 603
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||  ||| | |||||||| ||||||||| ||||||||| |||||||||| ||  ||||||||||    
T  678 tggttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggac 603  T

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Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 9446 - 9521
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacggcataaactttatgggac 321  Q
    ||||||||||||||  ||| | |||||||| ||||||||| ||||||||| |||||||||| ||  ||||||||||    
T  9446 tggttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggac 9521  T

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Target: scaffold2127 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 514 - 546
Alignment:
Q  277 taacggagaggaccaaaatagtaaacggcataa 309  Q
    |||||||||||||||||||||||||||||||||    
T  514 taacggagaggaccaaaatagtaaacggcataa 546  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 207766 - 207814
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaa 294  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||    
T  207766 tggttcacctaagacatttgatgttaaaaactaacggagaggaccaaaa 207814  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 145866 - 145900
Alignment:
Q  275 attaacggagaggaccaaaatagtaaacggcataa 309  Q
    ||||||||||| |||||||||||||||||||||||    
T  145866 attaacggagatgaccaaaatagtaaacggcataa 145900  T

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Target: scaffold0098 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 41056 - 40999
Alignment:
Q  246 tggttcaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||||||| | |||||||| |||| ||||| || |||| ||||||||    
T  41056 tggttcaccttagacatttgatgttaaaaactaacagagagaactaaaacagtaaacg 40999  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 303
Target Start/End: Complemental strand, 22250 - 22218
Alignment:
Q  271 aaaaattaacggagaggaccaaaatagtaaacg 303  Q
    ||||||||||||||| |||||||||||||||||    
T  22250 aaaaattaacggagatgaccaaaatagtaaacg 22218  T

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