View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12868_low_21 (Length: 280)

Name: NF12868_low_21
Description: NF12868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12868_low_21
NF12868_low_21
[»] chr3 (54 HSPs)
chr3 (1-132)||(3362541-3362672)
chr3 (1-130)||(39282938-39283067)
chr3 (2-133)||(37203355-37203486)
chr3 (2-132)||(37157995-37158125)
chr3 (1-130)||(22445826-22445955)
chr3 (1-134)||(22622475-22622608)
chr3 (1-134)||(40552016-40552149)
chr3 (1-129)||(42505837-42505965)
chr3 (14-129)||(20373025-20373140)
chr3 (1-131)||(4015745-4015875)
chr3 (1-131)||(26941020-26941150)
chr3 (1-131)||(48355227-48355357)
chr3 (1-129)||(47481808-47481937)
chr3 (1-134)||(53228909-53229042)
chr3 (1-125)||(54506093-54506218)
chr3 (1-127)||(11357145-11357271)
chr3 (1-135)||(46297518-46297652)
chr3 (1-133)||(36012425-36012558)
chr3 (1-131)||(21009561-21009692)
chr3 (1-124)||(1089979-1090102)
chr3 (1-131)||(21193893-21194023)
chr3 (1-131)||(33378545-33378675)
chr3 (1-132)||(29099632-29099764)
chr3 (1-134)||(14586437-14586570)
chr3 (1-134)||(52040679-52040812)
chr3 (1-116)||(24707890-24708005)
chr3 (1-128)||(33698439-33698566)
chr3 (1-131)||(43975652-43975782)
chr3 (1-113)||(44186295-44186407)
chr3 (1-117)||(44891783-44891899)
chr3 (1-132)||(40936259-40936390)
chr3 (1-127)||(4761412-4761538)
chr3 (1-125)||(7327246-7327372)
chr3 (1-132)||(25580025-25580156)
chr3 (1-131)||(51212537-51212661)
chr3 (19-133)||(11356916-11357030)
chr3 (1-97)||(22451254-22451350)
chr3 (1-131)||(2008218-2008355)
chr3 (1-131)||(24488721-24488852)
chr3 (1-99)||(3654991-3655092)
chr3 (1-131)||(32373756-32373885)
chr3 (7-122)||(27480127-27480242)
chr3 (1-62)||(46994490-46994551)
chr3 (1-96)||(50475097-50475199)
chr3 (45-131)||(35844577-35844663)
chr3 (1-135)||(38591984-38592105)
chr3 (13-132)||(11467115-11467227)
chr3 (1-68)||(34133221-34133288)
chr3 (3-91)||(29164097-29164178)
chr3 (1-46)||(54828546-54828591)
chr3 (81-130)||(34133324-34133373)
chr3 (84-126)||(23165291-23165333)
chr3 (84-125)||(18271873-18271914)
chr3 (1-30)||(45174792-45174821)
[»] chr5 (56 HSPs)
chr5 (5-131)||(43254154-43254280)
chr5 (1-130)||(12910650-12910779)
chr5 (1-132)||(38527986-38528117)
chr5 (1-133)||(35511230-35511362)
chr5 (1-131)||(31705362-31705492)
chr5 (3-132)||(2888194-2888323)
chr5 (1-133)||(22255477-22255609)
chr5 (1-133)||(24886382-24886514)
chr5 (4-133)||(25889668-25889797)
chr5 (1-130)||(31786397-31786526)
chr5 (1-136)||(27330599-27330734)
chr5 (1-119)||(699445-699563)
chr5 (1-134)||(5830187-5830320)
chr5 (1-131)||(17157781-17157911)
chr5 (1-131)||(22981088-22981218)
chr5 (1-127)||(25669871-25669997)
chr5 (1-134)||(19120154-19120287)
chr5 (1-130)||(39573106-39573235)
chr5 (1-132)||(43308409-43308540)
chr5 (1-131)||(42343016-42343146)
chr5 (4-133)||(22019921-22020050)
chr5 (7-131)||(8437266-8437390)
chr5 (1-125)||(22973838-22973962)
chr5 (1-133)||(40133680-40133812)
chr5 (1-119)||(15992302-15992420)
chr5 (1-130)||(9200519-9200648)
chr5 (1-114)||(35504660-35504773)
chr5 (1-131)||(33908528-33908657)
chr5 (1-134)||(14409088-14409221)
chr5 (1-138)||(36867057-36867194)
chr5 (1-129)||(5837850-5837978)
chr5 (23-131)||(23115980-23116088)
chr5 (1-133)||(28416299-28416431)
chr5 (1-133)||(35934191-35934323)
chr5 (1-120)||(8741646-8741765)
chr5 (1-139)||(32563435-32563573)
chr5 (1-117)||(7208628-7208744)
chr5 (1-113)||(7693516-7693628)
chr5 (7-133)||(23954550-23954669)
chr5 (1-131)||(8467021-8467151)
chr5 (1-131)||(25500676-25500806)
chr5 (1-91)||(35826276-35826366)
chr5 (1-127)||(36860719-36860845)
chr5 (4-131)||(15724786-15724913)
chr5 (1-131)||(27318238-27318369)
chr5 (4-132)||(26269107-26269235)
chr5 (1-129)||(13956116-13956242)
chr5 (1-91)||(30969114-30969204)
chr5 (1-133)||(1428921-1429042)
chr5 (14-108)||(14919312-14919405)
chr5 (81-133)||(34853843-34853895)
chr5 (4-74)||(21088576-21088643)
chr5 (84-124)||(12080405-12080445)
chr5 (88-131)||(11898197-11898240)
chr5 (84-127)||(22616827-22616870)
chr5 (84-129)||(21321087-21321132)
[»] chr1 (56 HSPs)
chr1 (1-137)||(23999638-23999775)
chr1 (1-132)||(32267325-32267456)
chr1 (1-133)||(10923018-10923150)
chr1 (1-131)||(2960039-2960169)
chr1 (1-131)||(10181762-10181892)
chr1 (1-131)||(34012137-34012267)
chr1 (1-131)||(19899523-19899654)
chr1 (1-138)||(37451576-37451713)
chr1 (1-125)||(27563666-27563790)
chr1 (1-137)||(30254714-30254850)
chr1 (1-128)||(9902812-9902939)
chr1 (1-132)||(32216346-32216477)
chr1 (1-131)||(46931700-46931831)
chr1 (1-134)||(11742120-11742253)
chr1 (1-133)||(15383224-15383357)
chr1 (1-133)||(14758323-14758455)
chr1 (1-132)||(48353833-48353964)
chr1 (157-262)||(10562283-10562388)
chr1 (1-125)||(27763071-27763196)
chr1 (1-110)||(28564559-28564668)
chr1 (1-136)||(4330572-4330707)
chr1 (1-131)||(8222419-8222549)
chr1 (1-131)||(27532737-27532866)
chr1 (1-130)||(39393675-39393804)
chr1 (1-129)||(15168387-15168515)
chr1 (1-133)||(27266954-27267085)
chr1 (1-131)||(47682249-47682379)
chr1 (1-125)||(38823505-38823629)
chr1 (9-131)||(15752328-15752450)
chr1 (1-131)||(16415937-16416067)
chr1 (1-127)||(21289891-21290017)
chr1 (1-98)||(27227273-27227370)
chr1 (1-137)||(1547562-1547698)
chr1 (1-133)||(3535214-3535346)
chr1 (1-108)||(51129150-51129255)
chr1 (1-131)||(22171002-22171132)
chr1 (1-134)||(47279480-47279614)
chr1 (1-110)||(28769944-28770053)
chr1 (1-137)||(7078812-7078948)
chr1 (1-132)||(31962907-31963039)
chr1 (8-123)||(42721334-42721448)
chr1 (1-72)||(3309444-3309515)
chr1 (1-87)||(25160923-25161010)
chr1 (1-133)||(1359689-1359820)
chr1 (1-99)||(238300-238398)
chr1 (1-86)||(30326751-30326837)
chr1 (1-108)||(31621326-31621434)
chr1 (3-91)||(41926449-41926537)
chr1 (20-133)||(33725364-33725478)
chr1 (37-133)||(48620916-48621012)
chr1 (1-126)||(40885104-40885230)
chr1 (1-86)||(37618705-37618786)
chr1 (1-72)||(18422942-18423006)
chr1 (66-132)||(38759846-38759912)
chr1 (84-126)||(42663232-42663274)
chr1 (84-132)||(47555092-47555140)
[»] chr4 (50 HSPs)
chr4 (1-133)||(36493473-36493605)
chr4 (1-133)||(34361275-34361408)
chr4 (1-133)||(25184408-25184540)
chr4 (1-131)||(6864330-6864460)
chr4 (1-131)||(19089239-19089369)
chr4 (1-130)||(3042914-3043043)
chr4 (1-133)||(37663525-37663657)
chr4 (1-131)||(19440434-19440564)
chr4 (1-134)||(26896382-26896516)
chr4 (3-129)||(46887946-46888072)
chr4 (1-130)||(37775953-37776082)
chr4 (1-132)||(32912364-32912496)
chr4 (1-133)||(33816300-33816432)
chr4 (1-128)||(7703804-7703931)
chr4 (1-132)||(29583985-29584116)
chr4 (4-131)||(49376265-49376392)
chr4 (1-131)||(30002427-30002557)
chr4 (1-133)||(17272259-17272391)
chr4 (1-133)||(23431850-23431982)
chr4 (1-132)||(47254035-47254166)
chr4 (1-131)||(879334-879464)
chr4 (1-131)||(25700842-25700972)
chr4 (1-130)||(9139524-9139653)
chr4 (1-134)||(23761366-23761499)
chr4 (1-138)||(39400303-39400440)
chr4 (7-131)||(28002772-28002896)
chr4 (1-129)||(50765015-50765143)
chr4 (1-132)||(4205279-4205410)
chr4 (1-131)||(32579741-32579871)
chr4 (4-125)||(32592382-32592503)
chr4 (1-133)||(37288023-37288156)
chr4 (1-125)||(46883905-46884030)
chr4 (1-132)||(42200025-42200156)
chr4 (4-108)||(50697540-50697644)
chr4 (1-116)||(1815596-1815710)
chr4 (1-131)||(4598277-4598407)
chr4 (1-103)||(35025381-35025482)
chr4 (1-133)||(17168008-17168140)
chr4 (1-133)||(17173585-17173717)
chr4 (4-116)||(33341696-33341808)
chr4 (1-133)||(35020815-35020951)
chr4 (1-103)||(7152018-7152120)
chr4 (1-131)||(55240891-55241021)
chr4 (12-132)||(38012568-38012688)
chr4 (1-91)||(55477717-55477807)
chr4 (1-129)||(27396911-27397037)
chr4 (1-89)||(34947923-34948011)
chr4 (9-131)||(5047752-5047874)
chr4 (1-128)||(4934001-4934129)
chr4 (84-133)||(47073059-47073108)
[»] chr2 (41 HSPs)
chr2 (2-130)||(43648024-43648152)
chr2 (1-137)||(33660149-33660285)
chr2 (1-131)||(35959187-35959317)
chr2 (1-131)||(41961135-41961265)
chr2 (1-132)||(26357872-26358003)
chr2 (8-131)||(29241923-29242046)
chr2 (1-134)||(11366155-11366289)
chr2 (1-131)||(19289101-19289231)
chr2 (7-132)||(31862153-31862278)
chr2 (1-133)||(2325154-2325286)
chr2 (4-138)||(18494052-18494186)
chr2 (1-131)||(19424420-19424550)
chr2 (1-132)||(4167217-4167348)
chr2 (1-133)||(4763926-4764059)
chr2 (1-126)||(33709015-33709140)
chr2 (1-133)||(7006715-7006846)
chr2 (1-133)||(19500693-19500823)
chr2 (3-129)||(3177236-3177362)
chr2 (1-134)||(41465796-41465929)
chr2 (1-132)||(27349730-27349856)
chr2 (1-117)||(31570526-31570642)
chr2 (1-108)||(5881824-5881931)
chr2 (1-107)||(37906005-37906112)
chr2 (1-108)||(43770649-43770756)
chr2 (5-128)||(39167150-39167273)
chr2 (16-129)||(44913977-44914090)
chr2 (1-125)||(13711754-13711878)
chr2 (4-129)||(41051083-41051205)
chr2 (9-130)||(33902317-33902439)
chr2 (44-133)||(45328028-45328116)
chr2 (1-91)||(33550801-33550895)
chr2 (1-103)||(18257344-18257446)
chr2 (1-58)||(4478660-4478717)
chr2 (7-91)||(41463408-41463492)
chr2 (1-59)||(4263926-4263984)
chr2 (1-45)||(19314142-19314186)
chr2 (66-134)||(36642296-36642364)
chr2 (35-79)||(17053961-17054005)
chr2 (35-79)||(17071602-17071646)
chr2 (1-42)||(44286244-44286285)
chr2 (88-136)||(27138682-27138730)
[»] chr8 (44 HSPs)
chr8 (1-132)||(1149397-1149528)
chr8 (1-132)||(16446640-16446771)
chr8 (1-134)||(43643358-43643491)
chr8 (1-133)||(34895256-34895388)
chr8 (1-133)||(35859228-35859360)
chr8 (1-132)||(37970284-37970415)
chr8 (1-133)||(5299710-5299842)
chr8 (1-136)||(4132447-4132582)
chr8 (1-131)||(7890723-7890853)
chr8 (1-129)||(23854200-23854327)
chr8 (1-119)||(8803594-8803713)
chr8 (8-130)||(41362723-41362845)
chr8 (1-128)||(466126-466253)
chr8 (1-131)||(38644272-38644402)
chr8 (1-133)||(11727318-11727451)
chr8 (1-117)||(44869791-44869907)
chr8 (1-131)||(16223157-16223290)
chr8 (1-132)||(33198096-33198227)
chr8 (1-134)||(1953751-1953884)
chr8 (1-126)||(18259373-18259498)
chr8 (1-125)||(12587876-12588000)
chr8 (1-117)||(35459491-35459607)
chr8 (7-130)||(31933653-31933776)
chr8 (1-131)||(1205221-1205351)
chr8 (1-99)||(6098311-6098409)
chr8 (9-128)||(34951826-34951945)
chr8 (1-132)||(30654348-30654479)
chr8 (1-131)||(33906506-33906634)
chr8 (1-131)||(10554970-10555100)
chr8 (1-91)||(24823200-24823290)
chr8 (1-99)||(27082636-27082734)
chr8 (1-133)||(36694730-36694862)
chr8 (1-125)||(39098891-39099015)
chr8 (1-111)||(40862713-40862824)
chr8 (7-132)||(43025974-43026100)
chr8 (1-61)||(1149756-1149816)
chr8 (6-112)||(12876409-12876515)
chr8 (1-68)||(9864442-9864509)
chr8 (59-133)||(13307931-13308005)
chr8 (84-134)||(30650896-30650946)
chr8 (60-133)||(41910822-41910895)
chr8 (81-130)||(9864545-9864594)
chr8 (84-126)||(5018564-5018606)
chr8 (84-129)||(34686112-34686156)
[»] chr7 (48 HSPs)
chr7 (1-131)||(17842345-17842475)
chr7 (1-131)||(37110144-37110274)
chr7 (1-133)||(30055797-30055929)
chr7 (1-129)||(24212011-24212140)
chr7 (1-134)||(31520499-31520632)
chr7 (1-128)||(9355590-9355717)
chr7 (1-132)||(37703258-37703389)
chr7 (1-131)||(7335063-7335193)
chr7 (1-134)||(18797597-18797730)
chr7 (1-125)||(31578831-31578955)
chr7 (1-133)||(37704452-37704584)
chr7 (1-131)||(35353378-35353508)
chr7 (2-131)||(6546790-6546919)
chr7 (1-130)||(27284014-27284145)
chr7 (1-128)||(44411304-44411431)
chr7 (1-131)||(29173792-29173922)
chr7 (1-116)||(46480905-46481020)
chr7 (1-131)||(12390410-12390540)
chr7 (1-133)||(26587851-26587983)
chr7 (19-131)||(38258867-38258979)
chr7 (1-131)||(15612520-15612650)
chr7 (1-109)||(37347291-37347399)
chr7 (1-132)||(4583189-4583320)
chr7 (1-132)||(8861555-8861686)
chr7 (1-132)||(26980576-26980707)
chr7 (1-131)||(10358975-10359105)
chr7 (1-130)||(32432722-32432851)
chr7 (4-128)||(23111465-23111589)
chr7 (1-131)||(41764839-41764969)
chr7 (1-122)||(10481875-10481996)
chr7 (1-86)||(11071473-11071558)
chr7 (159-260)||(45936575-45936676)
chr7 (1-119)||(15672532-15672650)
chr7 (1-99)||(22687501-22687599)
chr7 (1-131)||(48928058-48928188)
chr7 (1-116)||(32820830-32820944)
chr7 (1-91)||(25691345-25691435)
chr7 (1-131)||(5657241-5657372)
chr7 (1-91)||(43925365-43925455)
chr7 (1-62)||(12166013-12166074)
chr7 (1-101)||(34361967-34362069)
chr7 (14-132)||(21991914-21992028)
chr7 (8-103)||(32592996-32593090)
chr7 (3-134)||(44598938-44599069)
chr7 (1-37)||(33688117-33688153)
chr7 (84-127)||(4902657-4902700)
chr7 (66-133)||(33688051-33688118)
chr7 (57-131)||(12166215-12166289)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-134)||(8182-8315)
[»] chr6 (17 HSPs)
chr6 (1-131)||(20768377-20768507)
chr6 (1-131)||(6090941-6091071)
chr6 (1-133)||(3879696-3879828)
chr6 (3-130)||(1946131-1946260)
chr6 (1-132)||(5627686-5627818)
chr6 (1-129)||(7054533-7054662)
chr6 (1-132)||(4318574-4318711)
chr6 (1-126)||(33892776-33892901)
chr6 (1-119)||(8513523-8513634)
chr6 (1-110)||(33619125-33619237)
chr6 (1-131)||(7234791-7234924)
chr6 (1-91)||(21016917-21017007)
chr6 (1-118)||(29182459-29182573)
chr6 (1-96)||(6089198-6089286)
chr6 (32-87)||(33724062-33724117)
chr6 (84-133)||(6613655-6613704)
chr6 (84-131)||(21016726-21016773)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-133)||(145773-145906)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-133)||(44251-44383)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-133)||(154404-154536)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-130)||(12204-12332)
[»] scaffold0002 (4 HSPs)
scaffold0002 (1-131)||(408191-408319)
scaffold0002 (1-119)||(93873-93990)
scaffold0002 (1-91)||(423-513)
scaffold0002 (81-136)||(692-747)
[»] scaffold0008 (1 HSPs)
scaffold0008 (36-131)||(267606-267701)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-51)||(101010-101058)
[»] scaffold0262 (1 HSPs)
scaffold0262 (88-125)||(11378-11415)


Alignment Details
Target: chr3 (Bit Score: 124; Significance: 8e-64; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 3362541 - 3362672
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3362541 tgcaagcattactggatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaag 3362640  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||||||||||||||||||||||||||||    
T  3362641 tcaatttcctgactgcaccatagaagctccct 3362672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39282938 - 39283067
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  39282938 tgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaag 39283037  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    ||| ||||||||||||||| ||||||||||    
T  39283038 tcagtttcctgactgcaccgtagaagctcc 39283067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 37203355 - 37203486
Alignment:
Q  2 gcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagt 101  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  37203355 gcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagt 37203454  T
Q  102 caatttcctgactgcaccatagaagctccctt 133  Q
    || ||||||||||||||| |||||||||||||    
T  37203455 cagtttcctgactgcaccgtagaagctccctt 37203486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 37157995 - 37158125
Alignment:
Q  2 gcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagt 101  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  37157995 gcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagt 37158094  T
Q  102 caatttcctgactgcaccatagaagctccct 132  Q
    || ||||||||||||||| ||||||||||||    
T  37158095 cagtttcctgactgcaccgtagaagctccct 37158125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 22445955 - 22445826
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  22445955 tgcaagtattactggatgaattactattgatcattaatcagtaatcaacaatttaaatatgaatcaaacattaagatcataattaacttttccaaaaaag 22445856  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    ||| |||||||||||||| |||||||||||    
T  22445855 tcagtttcctgactgcactatagaagctcc 22445826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 22622608 - 22622475
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||     
T  22622608 tgcaagcattactagatgaattactattgatcattaatcagtaatcaactatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaa 22622509  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| ||||||||||||||| || |||||||||||    
T  22622508 tcagtttcctgactgcaccgtaaaagctccctta 22622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40552149 - 40552016
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  40552149 tgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaag 40552050  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| ||||| ||||||||| ||||||||||||||    
T  40552049 tcagtttccagactgcaccgtagaagctccctta 40552016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 42505965 - 42505837
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||  ||||||||    
T  42505965 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaag 42505866  T
Q  101 tcaatttcctgactgcaccatagaagctc 129  Q
    ||||||||||||||||||| |||||||||    
T  42505865 tcaatttcctgactgcaccgtagaagctc 42505837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 20373140 - 20373025
Alignment:
Q  14 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgac 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  20373140 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgac 20373041  T
Q  114 tgcaccatagaagctc 129  Q
    ||||||||||||||||    
T  20373040 tgcaccatagaagctc 20373025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4015745 - 4015875
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  4015745 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 4015844  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| |||||||||| |||||||||||    
T  4015845 tcagtttcatgactgcaccgtagaagctccc 4015875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 26941150 - 26941020
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||    
T  26941150 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagcgttaaaatcaaaattaactttttcaaaaaag 26941051  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| ||||||||||| |||||||||||    
T  26941050 tcagttttctgactgcaccgtagaagctccc 26941020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 48355227 - 48355357
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  48355227 tgcaagtattactagatgaattattattgatcattaatcagtaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaag 48355326  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||||| ||||||||||||||||||||    
T  48355327 tcaatttcctaactgcaccatagaagctccc 48355357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 47481808 - 47481937
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  47481808 tgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 47481907  T
Q  100 gtcaatttcctgactgcaccatagaagctc 129  Q
     ||||||||||||||| ||| |||||||||    
T  47481908 atcaatttcctgactgtaccgtagaagctc 47481937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 53229042 - 53228909
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||     
T  53229042 tgcaagcattactagatgaattagtattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaaa 53228943  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| || |||||||||||| ||||||||||||||    
T  53228942 tcagttgcctgactgcaccgtagaagctccctta 53228909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 54506093 - 54506218
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  54506093 tgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 54506192  T
Q  100 gtcaatttcctgactgcaccatagaa 125  Q
     ||||||||||||||||||| |||||    
T  54506193 atcaatttcctgactgcaccgtagaa 54506218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 11357271 - 11357145
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  11357271 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaag 11357172  T
Q  101 tcaatttcctgactgcaccatagaagc 127  Q
    ||| ||  ||||||||| | |||||||    
T  11357171 tcagttgtctgactgcatcgtagaagc 11357145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 46297652 - 46297518
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||    
T  46297652 tgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaag 46297553  T
Q  101 tcaatttcctgactgcaccatagaagctcccttat 135  Q
    ||| |||  |||||||||| |||||||||||||||    
T  46297552 tcagttttttgactgcaccgtagaagctcccttat 46297518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 36012425 - 36012558
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataa-ttaacttttccaaaaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || ||||||||| |||||||    
T  36012425 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaattaaaatttaactttttcaaaaaa 36012524  T
Q  100 gtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||| |||| |||||||||| |||||||||||||    
T  36012525 gtcagtttcatgactgcaccgtagaagctccctt 36012558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 21009692 - 21009561
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||  ||||||    
T  21009692 tgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaatttttttaaaaaa 21009593  T
Q  100 gtcaatttcctgactgcaccatagaagctccc 131  Q
    |||| ||||||||||||||| ||||| |||||    
T  21009592 gtcagtttcctgactgcaccgtagaaactccc 21009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 1089979 - 1090102
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||    
T  1089979 tgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaag 1090078  T
Q  101 tcaatttcctgactgcaccataga 124  Q
    ||| |||||||||| |||| ||||    
T  1090079 tcagtttcctgactacaccgtaga 1090102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21193893 - 21194023
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  21193893 tgcaaccattactaaatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 21193992  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| |||||||||| |||||||||||    
T  21193993 tcagtttcatgactgcaccgtagaagctccc 21194023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 33378675 - 33378545
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || | |||||| |||| ||||||||    
T  33378675 tgcaaacattactagatgaattactattgatcattaatcaataatcaacgatttaaaaatgaatcaaacattaagattaaaattaattttttcaaaaaag 33378576  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||||||||||||||| |||||||||||    
T  33378575 tcagtttcctgactgcaccgtagaagctccc 33378545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 29099632 - 29099764
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaac-ttttccaaaaaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||| ||||| ||||||    
T  29099632 tgcaagcattactagatgaattaccattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaatattaaaattaactttttcaaaaaaa 29099731  T
Q  100 gtcaatttcctgactgcaccatagaagctccct 132  Q
    |||| |||| |||||||||| ||||||||||||    
T  29099732 gtcagtttcatgactgcaccgtagaagctccct 29099764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 14586570 - 14586437
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||| |||| ||||||||    
T  14586570 tgcaagcattactagataaattactactgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaattttttcaaaaaag 14586471  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| ||||  || |||||||||||||||||||||    
T  14586470 tcagtttcacgagtgcaccatagaagctccctta 14586437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 52040812 - 52040679
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  52040812 tgcaaacattactagatgaatgattattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaag 52040713  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| ||   |||||||| | ||||||||||||||    
T  52040712 tcagttgtatgactgcagcgtagaagctccctta 52040679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24708005 - 24707890
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||     
T  24708005 tgcaagcattattagataaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaa 24707906  T
Q  101 tcaatttcctgactgc 116  Q
    ||||||| ||||||||    
T  24707905 tcaattttctgactgc 24707890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 33698439 - 33698566
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| || | ||||||||||| ||||||||    
T  33698439 tgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatcagtcattaagattaaaattaactttttcaaaaaag 33698538  T
Q  101 tcaatttcctgactgcaccatagaagct 128  Q
    ||| |||| | | |||||| ||||||||    
T  33698539 tcagtttcataaatgcaccgtagaagct 33698566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 43975782 - 43975652
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||  ||||| |||| ||||| ||    
T  43975782 tgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaagattaattttttcaaaagag 43975683  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| ||||||||||| ||||| |||||    
T  43975682 tcagttttctgactgcaccgtagaaactccc 43975652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44186407 - 44186295
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||| ||| | |||||     
T  44186407 tgcaagcattactagataaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacattttcgaaaaaa 44186308  T
Q  101 tcaatttcctgac 113  Q
    |||||||| ||||    
T  44186307 tcaatttcatgac 44186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44891783 - 44891899
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || | |||||||||||  |||||||    
T  44891783 tgcaagcattactagatgaattactgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaacttttttaaaaaag 44891882  T
Q  101 tcaatttcctgactgca 117  Q
    ||| |||  ||||||||    
T  44891883 tcagtttgatgactgca 44891899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 40936259 - 40936390
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||   ||||||||||| ||||||||    
T  40936259 tgcaagcattactagataaattactattgatcattaatcggtaatcaacaatttaaaaataaatcaatcattaagattgaaattaactttttcaaaaaag 40936358  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    |||||||  || | ||||| ||||||||||||    
T  40936359 tcaatttgatgtccgcaccgtagaagctccct 40936390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4761538 - 4761412
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||| ||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||  |||||||    
T  4761538 tgcaaacattaccagatgaattactattaatcattaatcagaaatcaacaatttgaaaatgaatcaaacattaaaatcaaaattaactttttaaaaaaag 4761439  T
Q  101 tcaatttcctgactgcaccatagaagc 127  Q
    | | |||| ||| ||||| ||||||||    
T  4761438 taactttcttgaatgcactatagaagc 4761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 7327372 - 7327246
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaac--ttttccaaaaa 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| || | |||||||  ||||  |||||    
T  7327372 tgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaacttttttaaaaaaa 7327273  T
Q  99 agtcaatttcctgactgcaccatagaa 125  Q
    |||||||||| | |||||||| |||||    
T  7327272 agtcaatttcataactgcaccgtagaa 7327246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 25580025 - 25580156
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||| || |  ||||||||||  |||||||    
T  25580025 tgcaagcattactagatgaattactattgatcattaatccgcaatcaacaatttaaaaatgaaccaatcattaagattaagattaacttttttaaaaaag 25580124  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||||  ||||||||  ||||| ||||||    
T  25580125 tcaatttcaagactgcactgtagaaactccct 25580156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 51212661 - 51212537
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||      ||||| |||| ||||||||||| |||||| |    
T  51212661 tgcaagcattactagatgaattactattgatcattaattaaaaatcaacaatttaaaaatgaa------attaagatcaaaattaactttttcaaaaatg 51212568  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| |||||||||||||||||||||||    
T  51212567 tcagttttctgactgcaccatagaagctccc 51212537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 11357030 - 11356916
Alignment:
Q  19 aattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcac 118  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||| ||  ||||||||||    
T  11357030 aattactattcatcattaattagtaatcaacaatttaaaaatgaatccaacattaagatcaaaattaactttttcaaaaaagtcagttgtctgactgcac 11356931  T
Q  119 catagaagctccctt 133  Q
    | |||| ||||||||    
T  11356930 cgtagatgctccctt 11356916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22451254 - 22451350
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaa 97  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||| |||| ||||||||||| |||||    
T  22451254 tgcaagcattactagatgaattattattgatcattaatcagcaatcaaaaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaa 22451350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2008218 - 2008355
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaat-------caacaatttaaaaatgaatcaaacattaaaatcataattaacttttcc 93  Q
    |||||||||||||||||||| || |||||||||||||||||||||       ||||||||||||||||||||||||||||| || | ||||||||||| |    
T  2008218 tgcaagcattactagatgaaataatattgatcattaatcagtaatcattaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttc 2008317  T
Q  94 aaaaaagtcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||||| |||| ||| |||||| || ||||||||    
T  2008318 aaaaaagtcagtttcatgattgcaccgtaaaagctccc 2008355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 24488852 - 24488721
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaa-aaaa 99  Q
    |||||||||||||||||| ||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||| || | |||||||||||  || ||||    
T  24488852 tgcaagcattactagatgcattactattaatcatgaatcaataatcaataatttaaaaatgaatcaaacattaatattaaaattaactttttaaataaaa 24488753  T
Q  100 gtcaatttcctgactgcaccatagaagctccc 131  Q
    ||||||||||| | | || | |||||||||||    
T  24488752 gtcaatttcctcattacatcgtagaagctccc 24488721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3655092 - 3654991
Alignment:
Q  1 tgcaagcattactagat--gaattactattgatcattaatcagtaatcaacaatttaaaaat-gaatcaaacattaaaatcataattaacttttccaaaa 97  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||| |||||    
T  3655092 tgcaagcattactagatatgaattactattgattattaatcagtaatcaacaatttaaaaataaaatcaaacattaaaatcaaaattaacattttcaaaa 3654993  T
Q  98 aa 99  Q
    ||    
T  3654992 aa 3654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 32373756 - 32373885
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  | || ||| || | ||||||||||| |||||||     
T  32373756 tgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaattt-aaaatgaattcatcaataagattaaaattaactttttcaaaaaat 32373854  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||||  ||||| ||| |||||||||||    
T  32373855 tcagtttcacgactgtaccgtagaagctccc 32373885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 27480242 - 27480127
Alignment:
Q  7 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatt 106  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||| |||||||| | || |||||  ||||  |||||| ||||||    
T  27480242 cattactagatgaattactattgattattaatcagcgatcaacaatttaaaaatgaatcgaacattaagaacaaaattatatttttaaaaaaaatcaatt 27480143  T
Q  107 tcctgactgcaccata 122  Q
    ||||  ||||||||||    
T  27480142 tcctccctgcaccata 27480127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46994551 - 46994490
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46994551 tgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatga 46994490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 50475097 - 50475199
Alignment:
Q  1 tgcaagcattactagatgaattactattgatca-------ttaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttcc 93  Q
    ||||||||||||||||||||||| |||||||||       ||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| |    
T  50475097 tgcaagcattactagatgaattagtattgatcattaatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaaatttttc 50475196  T
Q  94 aaa 96  Q
    |||    
T  50475197 aaa 50475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 35844577 - 35844663
Alignment:
Q  45 tcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||||||||| | |||||||| || ||||||||    
T  35844577 tcaacaatttaaaaataaatcaaacattaaaattaaaattaactttttcaaaaaagtcaatttcataactgcaccgtaaaagctccc 35844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 38591984 - 38592105
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||| ||||||||    
T  38591984 tgcaagcattattaaacaaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaa-------------aattaactttttcaaaaaag 38592070  T
Q  101 tcaatttcctgactgcaccatagaagctcccttat 135  Q
    |||||||| | |||||||| | |||||||||||||    
T  38592071 tcaatttcttaactgcaccgttgaagctcccttat 38592105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 11467115 - 11467227
Alignment:
Q  13 tagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctga 112  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||| |||||| |  | ||||||||||| ||||||||||| |||  |||    
T  11467115 tagatgaattactattgatcattaat-------caacaatttaaaaatgaatcaatcattaagaataaaattaactttttcaaaaaagtcagtttgatga 11467207  T
Q  113 ctgcaccatagaagctccct 132  Q
    ||||||| ||||||||||||    
T  11467208 ctgcaccgtagaagctccct 11467227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34133221 - 34133288
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaa 68  Q
    |||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||    
T  34133221 tgcaagcattactagatgaattactagtaatcatgaatcggtaatcaacaatttaaaaatgaatcaaa 34133288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 29164097 - 29164178
Alignment:
Q  3 caagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||| || | |||||||||||    
T  29164097 caagcattactagatgaattactattgatcat-------taatcaacaatttaaaaataaatcaaacattaagattaaaattaactttt 29164178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 54828591 - 54828546
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatc 46  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  54828591 tgcaagcattactagataaattactattgatcattaatcagtaatc 54828546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 34133324 - 34133373
Alignment:
Q  81 aattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctcc 130  Q
    ||||||||||| ||||||||||| |||||| |||||||| ||||||||||    
T  34133324 aattaactttttcaaaaaagtcagtttcctaactgcaccttagaagctcc 34133373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 23165333 - 23165291
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaag 126  Q
    |||||||| |||||||||||||||| |||||||||| ||||||    
T  23165333 taactttttcaaaaaagtcaatttcatgactgcaccgtagaag 23165291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 18271914 - 18271873
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaa 125  Q
    ||||||||  ||||||||||||||| ||||||||||||||||    
T  18271914 taacttttttaaaaaagtcaatttcttgactgcaccatagaa 18271873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 45174792 - 45174821
Alignment:
Q  1 tgcaagcattactagatgaattactattga 30  Q
    ||||||||||||||||||||||||||||||    
T  45174792 tgcaagcattactagatgaattactattga 45174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 7e-61; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 43254154 - 43254280
Alignment:
Q  5 agcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  43254154 agcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtcaa 43254253  T
Q  105 tttcctgactgcaccatagaagctccc 131  Q
    |||||||||||||||||||||||||||    
T  43254254 tttcctgactgcaccatagaagctccc 43254280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12910650 - 12910779
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12910650 tgcaagcattactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaag 12910749  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    ||| ||||||||||||||||||||||||||    
T  12910750 tcagtttcctgactgcaccatagaagctcc 12910779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 38528117 - 38527986
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||     
T  38528117 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaa 38528018  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| ||||||||||||||| ||||||||||||    
T  38528017 tcagtttcctgactgcaccgtagaagctccct 38527986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 35511362 - 35511230
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  35511362 tgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaag 35511263  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| ||||||||||||||| |||||||||||||    
T  35511262 tcagtttcctgactgcaccgtagaagctccctt 35511230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 31705492 - 31705362
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  31705492 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttcaaaaaag 31705393  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||| |||||||||| ||||| |||||    
T  31705392 tcaatttcttgactgcaccgtagaatctccc 31705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 2888323 - 2888194
Alignment:
Q  3 caagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  2888323 caagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtc 2888224  T
Q  103 aatttcctgactgcaccatagaagctccct 132  Q
    ||||| ||||||||||| ||||||| ||||    
T  2888223 aattttctgactgcaccgtagaagccccct 2888194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 22255477 - 22255609
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  22255477 tgcaagccttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttaaaaaaag 22255576  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| ||||||||||| ||| |||||||||||||    
T  22255577 tcagtttcctgactgtaccgtagaagctccctt 22255609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 24886382 - 24886514
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  24886382 tgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaag 24886481  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| ||||||||||||| ||||||||||    
T  24886482 tcagtttcttgactgcaccataaaagctccctt 24886514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 25889668 - 25889797
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||| ||||||||    
T  25889668 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaacttttccagaaaagtca 25889767  T
Q  104 atttcctgactgcaccatagaagctccctt 133  Q
     ||||||||||||| | |||||||||||||    
T  25889768 gtttcctgactgcatcgtagaagctccctt 25889797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 31786526 - 31786397
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  31786526 tgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaatatcaaaattaactttttcaaaaaag 31786427  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    ||| |||||||| |||||||||||| ||||    
T  31786426 tcagtttcctgattgcaccatagaatctcc 31786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 27330599 - 27330734
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || | ||||||||||| |||| |||    
T  27330599 tgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaactttttcaaacaag 27330698  T
Q  101 tcaatttcctgactgcaccatagaagctcccttatt 136  Q
    |||||||| |||||||||| ||||||||||||||||    
T  27330699 tcaatttcatgactgcaccgtagaagctcccttatt 27330734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 699445 - 699563
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  699445 tgcaagcattactagatgaattactattgattattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaag 699544  T
Q  101 tcaatttcctgactgcacc 119  Q
    ||| |||||||||||||||    
T  699545 tcagtttcctgactgcacc 699563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 5830187 - 5830320
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg-aatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||     
T  5830187 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaacttttcc-aaaat 5830285  T
Q  100 gtcaatttcctgactgcaccatagaagctccctta 134  Q
    |||||||| ||||||||||| |||||||| |||||    
T  5830286 gtcaattttctgactgcaccgtagaagcttcctta 5830320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17157911 - 17157781
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||| ||||||||    
T  17157911 tgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaacttgactttttcaaaaaag 17157812  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||| |||||| ||| |||||||||||    
T  17157811 tcaatttcttgactgtaccgtagaagctccc 17157781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22981088 - 22981218
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||   ||||||    
T  22981088 tgcaatcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttttaaaaag 22981187  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||||||||||||||||||||||||||    
T  22981188 tcagtttcctgactgcaccatagaagctccc 22981218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25669871 - 25669997
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||     
T  25669871 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaa 25669970  T
Q  101 tcaatttcctgactgcaccatagaagc 127  Q
    ||| |||| |||||||||| |||||||    
T  25669971 tcagtttcatgactgcaccgtagaagc 25669997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 19120154 - 19120287
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | ||||||||||| ||||||||    
T  19120154 tgcaagcattactagatgaattactattgatcattaatcagtgatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaag 19120253  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| |||| |||||||||| ||||||||||||||    
T  19120254 tcagtttcatgactgcaccttagaagctccctta 19120287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39573106 - 39573235
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  39573106 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 39573205  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    ||| |||| | |||||||| ||||||||||    
T  39573206 tcagtttcataactgcaccgtagaagctcc 39573235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43308540 - 43308409
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||| ||||||||||| ||||||||    
T  43308540 tgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaacgaatcaaatactaaaatcaaaattaactttttcaaaaaag 43308441  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| |||||| |||||||||| ||||||||||    
T  43308440 tcagtttcctaactgcaccattgaagctccct 43308409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 42343016 - 42343146
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| || |||||    
T  42343016 tgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaag 42343115  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| |||||||||| |||||||||||    
T  42343116 tcagtttcatgactgcaccgtagaagctccc 42343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 22019921 - 22020050
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||||||||| |||||||||||    
T  22019921 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagattaaaattaactttttcaaaaaagtca 22020020  T
Q  104 atttcctgactgcaccatagaagctccctt 133  Q
     |||| |||||||||| |||||| ||||||    
T  22020021 gtttcatgactgcaccgtagaagttccctt 22020050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 8437266 - 8437390
Alignment:
Q  7 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||| ||    
T  8437266 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaatattaaaatcaaaattaactttttcaaaaaagtcagtt 8437365  T
Q  107 tcctgactgcaccatagaagctccc 131  Q
    ||||||||||| | |||| ||||||    
T  8437366 tcctgactgcatcgtagatgctccc 8437390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 22973962 - 22973838
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||  ||||||     
T  22973962 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttaaaaaaaa 22973863  T
Q  101 tcaatttcctgactgcaccatagaa 125  Q
    ||| ||| |||||||||||||||||    
T  22973862 tcagttttctgactgcaccatagaa 22973838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 40133680 - 40133812
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| || | ||||||||||| ||||||||    
T  40133680 tgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaag 40133779  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||||||| ||||||||||| |||||||||||||    
T  40133780 tcaattttctgactgcaccgtagaagctccctt 40133812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 15992420 - 15992302
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  15992420 tgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 15992321  T
Q  101 tcaatttcctgactgcacc 119  Q
    ||| |||| ||||||||||    
T  15992320 tcagtttcatgactgcacc 15992302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 9200519 - 9200648
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| | |||||| |||| |||||||     
T  9200519 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaaatttaaaattaaaattaattttttcaaaaaaa 9200618  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    ||| |||| |||||||||| ||||||||||    
T  9200619 tcagtttcatgactgcaccgtagaagctcc 9200648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35504660 - 35504773
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  35504660 tgcaagtattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattgactttttcaaaaaag 35504759  T
Q  101 tcaatttcctgact 114  Q
    |||||||| |||||    
T  35504760 tcaatttcttgact 35504773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 33908528 - 33908657
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  33908528 tgcaagcattactagat-aattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaag 33908626  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| || |||||||| |||| ||||||    
T  33908627 tcagttttctaactgcaccgtagatgctccc 33908657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 14409221 - 14409088
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | |||||| |||| |||||||     
T  14409221 tgcaaacattactaaatgaattactattgatcattattcagcaatcaacaatttaaaaatgaatcgaacattaaaattaaaattaaatttttcaaaaaaa 14409122  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| ||||||||||||||| ||||||||||||||    
T  14409121 tcagtttcctgactgcaccgtagaagctccctta 14409088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 36867057 - 36867194
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| || | |||||||||||  |||||||    
T  36867057 tgcaaacattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaacttttttaaaaaag 36867156  T
Q  101 tcaatttcctgactgcaccatagaagctcccttattaa 138  Q
    ||||||| ||||||||||| |||||||||||| |||||    
T  36867157 tcaattttctgactgcaccgtagaagctccctaattaa 36867194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 5837850 - 5837978
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||| ||| ||||||||    
T  5837850 tgcaagcattactagatgaattactgttgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaaaattaaaattaaccttttcaaaaaag 5837949  T
Q  101 tcaatttcctgactgcaccatagaagctc 129  Q
    ||| |||  ||||||||||| ||||||||    
T  5837950 tcagtttgatgactgcaccagagaagctc 5837978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 23116088 - 23115980
Alignment:
Q  23 actattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccata 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||| ||    
T  23116088 actattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcattttcctgacttcaccgta 23115989  T
Q  123 gaagctccc 131  Q
    ||| |||||    
T  23115988 gaaactccc 23115980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 28416431 - 28416299
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| || | ||||||||||| ||||||||    
T  28416431 tgcaagcattacttgatgaattactattgatcattaatcaacaatcaacaatttaaaaaagaatcaaacattaagattaaaattaactttttcaaaaaag 28416332  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    |||  ||| |||||||||| |||||||||||||    
T  28416331 tcagcttcatgactgcaccgtagaagctccctt 28416299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 35934191 - 35934323
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||     
T  35934191 tgcaagcattactagttgaattattattgatcattaatcagtaatcaacaatttaaaaatgattcaaacattaaaattaaaattaactttttcaaaaaaa 35934290  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| | |||||||| ||||| |||||||    
T  35934291 tcagtttcataactgcaccgtagaaactccctt 35934323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8741765 - 8741646
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  8741765 tgcaagcatcactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 8741666  T
Q  101 tcaatttcctgactgcacca 120  Q
    ||  |||| |||||||||||    
T  8741665 tctgtttcatgactgcacca 8741646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 32563435 - 32563573
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| |||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  32563435 tgcaagaattactagataaattattattgatcattaatcagcaattaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaag 32563534  T
Q  101 tcaatttcctgactgcaccatagaagctcccttattaac 139  Q
    ||| |||| | |||||||| ||||||||| ||| |||||    
T  32563535 tcagtttcataactgcaccgtagaagctctcttcttaac 32563573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7208744 - 7208628
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||  |||||||    
T  7208744 tgcaagtattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttaaaaaaag 7208645  T
Q  101 tcaatttcctgactgca 117  Q
    ||| |||| | ||||||    
T  7208644 tcagtttcttaactgca 7208628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7693516 - 7693628
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||  | |||||    
T  7693516 tgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttagaaaag 7693615  T
Q  101 tcaatttcctgac 113  Q
    ||| |||| ||||    
T  7693616 tcagtttcatgac 7693628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 23954669 - 23954550
Alignment:
Q  7 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatt 106  Q
    ||||||| ||||||||||||||||||||||||||       ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||    
T  23954669 cattacttgatgaattactattgatcattaatca-------acaatttaaaaatgaattaaacattaagatcataattaactttttcaaaaaagtcagtt 23954577  T
Q  107 tcctgactgcaccatagaagctccctt 133  Q
    |||||||||||||||||||||||||||    
T  23954576 tcctgactgcaccatagaagctccctt 23954550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8467021 - 8467151
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  | |||||||||||  ||||||     
T  8467021 tgcaagcattactagatgaattactattgatcattaattagtaatcaacagtttaaaaatgaatcaaacattaaaaataaaattaactttttaaaaaaaa 8467120  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||  ||| |||||||||||| |||||    
T  8467121 tcagtttaatgattgcaccatagaaactccc 8467151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25500806 - 25500676
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| | ||| || | ||||||||||| |||||||     
T  25500806 tgcaagcattactagatgaaatactgttgatcattaatcagtaattaacaatttaaaaatgaatcaaatactaagattaaaattaactttttcaaaaaaa 25500707  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| |||||||||| |||||||||||    
T  25500706 tcagtttcatgactgcaccgtagaagctccc 25500676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35826366 - 35826276
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  35826366 tgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 35826276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 36860719 - 36860845
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||||| |||||| || | |||||||||||  |||||||    
T  36860719 tgcaagcattactaaatgaattactattaatcatgaattagtaatcaacaatttaaaaatgaatcaagcattaagattaaaattaacttttttaaaaaag 36860818  T
Q  101 tcaatttcctgactgcaccatagaagc 127  Q
    ||||||| ||||||||||| |||||||    
T  36860819 tcaattttctgactgcaccgtagaagc 36860845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 15724786 - 15724913
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | | ||||||||||| ||||||| | |    
T  15724786 aagcattactagatgaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaagttaaaattaactttttcaaaaaaatta 15724885  T
Q  104 atttcctgactgcaccatagaagctccc 131  Q
     |||| ||||| |||| || ||||||||    
T  15724886 gtttcatgacttcaccttaaaagctccc 15724913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 27318369 - 27318238
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattt-aaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||| |||||||| |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| || | |||||||||||  ||||||    
T  27318369 tgcaaacattactatatgaattactattgatcattaatcaaaaatcaacaattttaaaaatgaatcaaacattaagattaaaattaacttttttaaaaaa 27318270  T
Q  100 gtcaatttcctgactgcaccatagaagctccc 131  Q
    |||| ||| ||||||||||||||||| |||||    
T  27318269 gtcagttttctgactgcaccatagaaactccc 27318238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 26269107 - 26269235
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| || | ||||||||||| || ||||||||    
T  26269107 aagcaatactagataaattactactgatcattaatcagtaatcaacaatttaaaaatgaaccaatcattaagattaaaattaactttttcataaaagtca 26269206  T
Q  104 atttcctgactgcaccatagaagctccct 132  Q
     |||| |||||||||| ||||| ||||||    
T  26269207 gtttcatgactgcaccgtagaaactccct 26269235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 13956242 - 13956116
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |   |||||||||||||||| ||||||| ||| |||||||     
T  13956242 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattt--aactttttcaaacattaaaatcaaaattaacattttcaaaaaaa 13956145  T
Q  101 tcaatttcctgactgcaccatagaagctc 129  Q
    |||  || ||||||||||| |||||||||    
T  13956144 tcagctttctgactgcaccgtagaagctc 13956116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30969204 - 30969114
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  30969204 tgcaagtattactagatgagttactattaatcattaatcagtaatccacaatttaaaaatgaatcaaacattaaaattaaaattaactttt 30969114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 1429042 - 1428921
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaat---caacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaa 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||              | | ||||||||||||||||||||||    
T  1429042 tgcaagcattactagatgaattactattgatcattaatcagtaatattcaacaatttaaa--------------tgatatcataattaacttttccaaaa 1428957  T
Q  98 aagtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||| |||| ||| ||||||||||||||||||||    
T  1428956 aagtcagtttcatgagtgcaccatagaagctccctt 1428921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 14919405 - 14919312
Alignment:
Q  14 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttc 108  Q
    ||||||||||| |||||||||||||||| |||| | ||||||||||||||||||||||||| |||| |||||| |||| ||||||||||| ||||    
T  14919405 agatgaattac-attgatcattaatcagaaatctaaaatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaagtcagtttc 14919312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 34853895 - 34853843
Alignment:
Q  81 aattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctt 133  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  34853895 aattaacttttccaaaaaagtcagtttcccgactgcaccatagaagctccctt 34853843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 21088643 - 21088576
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa 74  Q
    ||||||||||||||||||||||||| ||||| ||| | ||||   ||||||||||||||||||||||||||    
T  21088643 aagcattactagatgaattactattaatcatgaataaataat---caatttaaaaatgaatcaaacattaa 21088576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 12080445 - 12080405
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccataga 124  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  12080445 taactttttcaaaaaagtcaatttcctgactacaccataga 12080405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 11898197 - 11898240
Alignment:
Q  88 ttttccaaaaaagtcaatttcctgactgcaccatagaagctccc 131  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||    
T  11898197 tttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 11898240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 22616827 - 22616870
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaagc 127  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||    
T  22616827 taacttttccaaaaaaatcagttttctgactgcaccatagaagc 22616870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 21321087 - 21321132
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaagctc 129  Q
    |||||||| ||||||||||| ||| ||| |||||||||||||||||    
T  21321087 taactttttcaaaaaagtcagttttctggctgcaccatagaagctc 21321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 7e-58; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 23999638 - 23999775
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||     
T  23999638 tgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaag 23999737  T
Q  100 gtcaatttcctgactgcaccatagaagctcccttatta 137  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23999738 gtcaatttcctgactgcaccatagaagctcccttatta 23999775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 32267325 - 32267456
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||    
T  32267325 tgcaagcattactagatgaattactattgaacattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattttttcaaaaaag 32267424  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||||||||||||||| ||||||||||||    
T  32267425 tcaatttcctgactgcaccgtagaagctccct 32267456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 10923018 - 10923150
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||    
T  10923018 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaagag 10923117  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| ||| |||||||||||||||||||||||||    
T  10923118 tcagttttctgactgcaccatagaagctccctt 10923150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2960039 - 2960169
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||     
T  2960039 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaa 2960138  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||||||||||||||| |||||| ||||    
T  2960139 tcagtttcctgactgcaccgtagaagatccc 2960169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10181892 - 10181762
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10181892 tgcaagcattactagatgaattactattgaacattaatcaacaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaag 10181793  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    | | |||||||||||||||||||||||||||    
T  10181792 ttagtttcctgactgcaccatagaagctccc 10181762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 34012267 - 34012137
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  34012267 tgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaag 34012168  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||||||||||||||| |||||||||||    
T  34012167 tcagtttcctgactgcaccgtagaagctccc 34012137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19899654 - 19899523
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19899654 tgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttccaaaaaa 19899555  T
Q  100 gtcaatttcctgactgcaccatagaagctccc 131  Q
    |||| |||||| |||||||  |||||||||||    
T  19899554 gtcagtttcctaactgcactgtagaagctccc 19899523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 37451576 - 37451713
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  37451576 tgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttcaaaaaag 37451675  T
Q  101 tcaatttcctgactgcaccatagaagctcccttattaa 138  Q
    |||||||| | |||||||| ||||| ||||||| ||||    
T  37451676 tcaatttcttcactgcaccgtagaatctcccttcttaa 37451713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 27563790 - 27563666
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||     
T  27563790 tgcaagtattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaaagaatcaaacattaagatcataattaacttttccaaaaaaa 27563691  T
Q  101 tcaatttcctgactgcaccatagaa 125  Q
    ||| |||||||||||||||||||||    
T  27563690 tcagtttcctgactgcaccatagaa 27563666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 30254714 - 30254850
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  30254714 tgcaagcattactagatgaattactattgattattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaag 30254813  T
Q  101 tcaatttcctgactgcaccatagaagctcccttatta 137  Q
    ||| ||||||||||||||| ||||| |||| ||||||    
T  30254814 tcagtttcctgactgcaccgtagaaactcctttatta 30254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 9902939 - 9902812
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  9902939 tgcaagcactactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaactttttcaaaaaag 9902840  T
Q  101 tcaatttcctgactgcaccatagaagct 128  Q
    |||| ||| |||||||||| ||||||||    
T  9902839 tcaaattcttgactgcaccgtagaagct 9902812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 32216346 - 32216477
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||    
T  32216346 tgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaag 32216445  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| ||| ||||||||||| ||||||||||||    
T  32216446 tcagttttctgactgcaccgtagaagctccct 32216477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 46931700 - 46931831
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  46931700 tgcaagcattactagatgaatatattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 46931799  T
Q  100 gtcaatttcctgactgcaccatagaagctccc 131  Q
    |||| |||||| |||||||| |||||||||||    
T  46931800 gtcagtttccttactgcaccgtagaagctccc 46931831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11742253 - 11742120
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||     
T  11742253 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaa 11742154  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| |||| ||||||| |||||||| ||||||||    
T  11742153 tcagtttcatgactgcgccatagaaactccctta 11742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 15383224 - 15383357
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg-aatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  15383224 tgcaagcattactagatgaattactattgattattaatcagcaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactttttcaaaaaa 15383323  T
Q  100 gtcaatttcctgactgcaccatagaagctccctt 133  Q
     ||||||||||||||| ||| |||||||||||||    
T  15383324 atcaatttcctgactgaaccgtagaagctccctt 15383357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 14758323 - 14758455
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||    
T  14758323 tgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaag 14758422  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| |||||||||| |||||||||||||    
T  14758423 tcagtttcgtgactgcaccgtagaagctccctt 14758455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 48353833 - 48353964
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||     
T  48353833 tgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaa 48353932  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| |||| |||||||||| ||||||||||||    
T  48353933 tcagtttcatgactgcaccgtagaagctccct 48353964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 157 - 262
Target Start/End: Original strand, 10562283 - 10562388
Alignment:
Q  157 tgttgttaacttcaggcagatatgagcaagaattttccagtaccttatacaagcacaacatacatgtgtatcttgggaagtattcaatgtgtgttcattg 256  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  10562283 tgttgttaacctcaggcagatatgagcaagaattttccagtaccttatacaagcacagcatacatgtgtatcttgggaagtattcagtgtgtgttcattg 10562382  T
Q  257 ccttat 262  Q
    ||||||    
T  10562383 ccttat 10562388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 27763196 - 27763071
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||     
T  27763196 tgcaagcattactagataaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaat 27763097  T
Q  100 gtcaatttcctgactgcaccatagaa 125  Q
    |||||||||||||||| ||| |||||    
T  27763096 gtcaatttcctgactgtaccgtagaa 27763071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28564668 - 28564559
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  28564668 tgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaag 28564569  T
Q  101 tcaatttcct 110  Q
    ||||||||||    
T  28564568 tcaatttcct 28564559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 4330572 - 4330707
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||||||||     
T  4330572 tgcaagcattactagatgaattacaattgatcattaatcagtaatcaacaatataaaaatgaatcaaacattaagatcaaaattaatttttccaaaaaaa 4330671  T
Q  101 tcaatttcctgactgcaccatagaagctcccttatt 136  Q
    ||| ||  ||||||||||| |||||||| |||||||    
T  4330672 tcagttgtctgactgcaccgtagaagcttccttatt 4330707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8222419 - 8222549
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaa-tcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  8222419 tgcaagcattactagatgaatta-tattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactttttcaaaaaa 8222517  T
Q  100 gtcaatttcctgactgcaccatagaagctccc 131  Q
    |||| ||| ||||||| ||| |||||||||||    
T  8222518 gtcagttttctgactgtaccgtagaagctccc 8222549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 27532866 - 27532737
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || | ||||||||||| |||||||     
T  27532866 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaa-ttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaa 27532768  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| |||||||||| |||||||||||    
T  27532767 tcagtttcatgactgcaccgtagaagctccc 27532737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39393675 - 39393804
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||  |||||||    
T  39393675 tgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaataaaacattaaaattaaaattaacttttttaaaaaag 39393774  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    |||||||| |||||||  | ||||||||||    
T  39393775 tcaatttcatgactgccgcgtagaagctcc 39393804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 15168387 - 15168515
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||     
T  15168387 tgcaagcattattagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaaa 15168486  T
Q  101 tcaatttcctgactgcaccatagaagctc 129  Q
    ||| |||||| |||||||| |||||||||    
T  15168487 tcagtttcctaactgcaccgtagaagctc 15168515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 27267085 - 27266954
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||||||| |||||    
T  27267085 tgcaagcattactagatgaattactattgataattaatcaataatcaataatttaaaaatgaattaaacattaagatcaaaattaacttttcca-aaaag 27266987  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||||||| ||||||||||||||| ||||    
T  27266986 tcagtttcctgaatgcaccatagaagcttcctt 27266954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 47682379 - 47682249
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| || | ||||||||| | ||||||||    
T  47682379 tgcaagcattactaaatgaattactattgatcattaatcagtaattaacaatttaaaaaagaattaaacattaagattaaaattaacttgttcaaaaaag 47682280  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| |||||||||||||||||||||||    
T  47682279 tcagtttactgactgcaccatagaagctccc 47682249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 38823505 - 38823629
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || | |||||||||||  |||||||    
T  38823505 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaacaaatattaagattaaaattaacttttttaaaaaag 38823604  T
Q  101 tcaatttcctgactgcaccatagaa 125  Q
    ||| |||| |||||||||| |||||    
T  38823605 tcagtttcatgactgcaccgtagaa 38823629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 15752328 - 15752450
Alignment:
Q  9 ttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||   ||||| |||||||     
T  15752328 ttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttttaaaaaatcaatttt 15752427  T
Q  109 ctgactgcaccatagaagctccc 131  Q
    ||||||||||| |||||||||||    
T  15752428 ctgactgcaccgtagaagctccc 15752450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16415937 - 16416067
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||    
T  16415937 tgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttctaaaaaag 16416036  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    | | ||   ||||||| || |||||||||||    
T  16416037 ttagttatttgactgcgccgtagaagctccc 16416067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21289891 - 21290017
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||    
T  21289891 tgcaaacattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttctaaaaaag 21289990  T
Q  101 tcaatttcctgactgcaccatagaagc 127  Q
    ||| |||  | ||||||||||| ||||    
T  21289991 tcagttttttaactgcaccatataagc 21290017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 27227370 - 27227273
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  27227370 tgcaagcattactagatgaattactattgatcattaatcagtaatcaaccatttaaaaatgaattaaacattaatatcaaaattaacttttccaaaaa 27227273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 1547562 - 1547698
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| |||| ||||||||    
T  1547562 tgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaattttttcaaaaaag 1547661  T
Q  101 tcaatttcctgactgcaccatagaagctcccttatta 137  Q
    ||| |||| | | || ||| ||||| |||||| ||||    
T  1547662 tcagtttcataattgtaccgtagaaactccctaatta 1547698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 3535214 - 3535346
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| || | || ||||||||  ||||||     
T  3535214 tgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcaaacattaagattaaaactaactttttaaaaaaaa 3535313  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| ||||| |||| |||||||||||||    
T  3535314 tcagtttcatgactacaccgtagaagctccctt 3535346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 51129150 - 51129255
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||| ||||||||    
T  51129150 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagtattaaaat--aaattaactttttcaaaaaag 51129247  T
Q  101 tcaatttc 108  Q
    ||||||||    
T  51129248 tcaatttc 51129255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22171002 - 22171132
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||     
T  22171002 tgcaaacattattagataaattactattgatcattaattagtaatcaacaatttaaaaataaatcaaacattaaaatcaaaattaactttttcaaaaaaa 22171101  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| || | |||||| |||||||||||    
T  22171102 tcagttttctaattgcaccgtagaagctccc 22171132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 47279480 - 47279614
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaac-ttttccaaaaaa 99  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||| ||||| ||||||    
T  47279480 tgcaaacattattagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaa 47279579  T
Q  100 gtcaatttcctgactgcaccatagaagctccctta 134  Q
     ||| |||  |||||||||| ||||||||||||||    
T  47279580 atcagttttatgactgcaccgtagaagctccctta 47279614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28769944 - 28770053
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||     
T  28769944 tgcaaacattgctagatgaattactattgatcattaattaataatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaa 28770043  T
Q  101 tcaatttcct 110  Q
    ||||||||||    
T  28770044 tcaatttcct 28770053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 7078948 - 7078812
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || | ||||||||||| |||||||     
T  7078948 tgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaaa 7078849  T
Q  101 tcaatttcctgactgcaccatagaagctcccttatta 137  Q
    ||| |||| |||||| ||| || || ||||| |||||    
T  7078848 tcagtttcatgactgtaccgtaaaaactcccatatta 7078812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 31962907 - 31963039
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattt-aaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||| ||||||||||||| || | ||||||||||| |||||||    
T  31962907 tgcaagcattattagatgaactactattgatcattaatcggtaatcaacaattttaaaaataaatcaaacattaagattaaaattaactttttcaaaaaa 31963006  T
Q  100 gtcaatttcctgactgcaccatagaagctccct 132  Q
    |||| |||| | |||||||| ||||||||||||    
T  31963007 gtcagtttcataactgcaccgtagaagctccct 31963039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 42721334 - 42721448
Alignment:
Q  8 attactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaattt 107  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  42721334 attactagattaattactattgatcattaatgagtaatcaataatttaaaaatgaatcaaacattaaaatcataattaacttttttaaaaaa-tcaattt 42721432  T
Q  108 cctgactgcaccatag 123  Q
     |||||| ||| ||||    
T  42721433 tctgacttcactatag 42721448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3309444 - 3309515
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3309444 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 3309515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25160923 - 25161010
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg-aatcaaacattaaaatcataattaac 87  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  25160923 tgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaac 25161010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 1359820 - 1359689
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||   ||||   || |||    
T  1359820 tgcaagcattactggatgaattactatcgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatca-aattttttttttttaacaag 1359722  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| ||| ||||||||||| |||||| ||||||    
T  1359721 tcagttttctgactgcaccgtagaagatccctt 1359689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 238398 - 238300
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| || | ||| ||||||| |||||||    
T  238398 tgcaagcattactagatgaattactattaatcatgaatcagtaatccacaatttaaaaatgaatcaaacattaagattaaaatcaactttttcaaaaaa 238300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30326837 - 30326751
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg-aatcaaacattaaaatcataattaa 86  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  30326837 tgcaagcattactagatgaattactattgatcatcaatcagtaatcaacaatttaaaaatgaaatcaaatattaaaatcaaaattaa 30326751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31621434 - 31621326
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattta-aaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||| |||||||| |||| ||||||||||| |||||||    
T  31621434 tgcaagcattagtagatgaactactattgatcattaatcatcaatcaacaatttaaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaa 31621335  T
Q  100 gtcaatttc 108  Q
    |||| ||||    
T  31621334 gtcagtttc 31621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 41926449 - 41926537
Alignment:
Q  3 caagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    |||||||||||||||||||||||||||||||||||| | |||||||  |||||||| ||||||||||||||||||||||||||| ||||    
T  41926449 caagcattactagatgaattactattgatcattaattaataatcaatgatttaaaattgaatcaaacattaaaatcataattaattttt 41926537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 33725478 - 33725364
Alignment:
Q  20 attactattgatcattaatcagtaatcaacaatttaaaaa-tgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcac 118  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||| |||||||| |||| ||| ||||||| ||||||| ||| |||||||||||||     
T  33725478 attactattgatcattaatcagcaatcaacaattaaaaaaatgaatcgaacattaagatcaaaataaactttttcaaaaaaatcagtttcctgactgcaa 33725379  T
Q  119 catagaagctccctt 133  Q
    | || ||||||||||    
T  33725378 cgtataagctccctt 33725364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 48620916 - 48621012
Alignment:
Q  37 atcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||| ||||||||||||| ||||||||||||||||||| || | ||||||||||| || |||||||| |||| |||||||||| |||||||||||||    
T  48620916 atcattaatcaacaattttaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcagtttcatgactgcaccgtagaagctccctt 48621012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 40885104 - 40885230
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataa-ttaacttttccaaaaaa 99  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||| |||| ||||||||||| || |||||  | | || ||||| |||  ||||||    
T  40885104 tgcaaacattactagatgaattactattgatcattaattagcaatcaataattcaaaaatgaatcgaatattaaggttaaaagttaacatttttaaaaaa 40885203  T
Q  100 gtcaatttcctgactgcaccatagaag 126  Q
    |||||||| || | |||||||||||||    
T  40885204 gtcaattttctaattgcaccatagaag 40885230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37618786 - 37618705
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa 86  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||    | |||||||||||||||| ||||||    
T  37618786 tgcaagcattactagatgaattagtattgaccattaatcaataatcaacaatttaaa----attcaaacattaaaatcaaaattaa 37618705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18422942 - 18423006
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 72  Q
    |||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  18422942 tgcaagcattgctagatgaattactattgatcat-------taatcaacaatttaaaaatgaatcaaacatt 18423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 38759846 - 38759912
Alignment:
Q  66 aaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||||| |||| ||||||||||| ||||||||||| ||   |||||||||||||||||||||||    
T  38759846 aaacattaagatcaaaattaactttttcaaaaaagtcagttaattgactgcaccatagaagctccct 38759912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 42663274 - 42663232
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaag 126  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  42663274 taactttttcaaaaaagtcaatttcgtgactgcaccatagaag 42663232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 47555092 - 47555140
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaagctccct 132  Q
    |||||||| ||||||||||| |||||| |||||||| ||||||| ||||    
T  47555092 taactttttcaaaaaagtcagtttcctaactgcaccgtagaagccccct 47555140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 36493605 - 36493473
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  36493605 tgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaag 36493506  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||||||||||||||||||||||||||||||    
T  36493505 tcaatttcctgactgcaccatagaagctccctt 36493473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 34361408 - 34361275
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  34361408 tgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 34361309  T
Q  100 gtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||| ||||||||||||||| |||||||||||||    
T  34361308 gtcagtttcctgactgcaccgtagaagctccctt 34361275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 25184408 - 25184540
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  25184408 tgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaag 25184507  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| ||| |||||||||||||||||||||||||    
T  25184508 tcagttttctgactgcaccatagaagctccctt 25184540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 6864330 - 6864460
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  6864330 tgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaag 6864429  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| ||||||||||| |||||||||||    
T  6864430 tcagttttctgactgcaccgtagaagctccc 6864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19089369 - 19089239
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||  ||||||||    
T  19089369 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaag 19089270  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||||||||||||||||||| |||||||||||    
T  19089269 tcaatttcctgactgcaccgtagaagctccc 19089239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 3042914 - 3043043
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  3042914 tgcaagcattactagatgaattagtattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaag 3043013  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    |||||||| |||||||||| ||||||||||    
T  3043014 tcaatttcttgactgcaccgtagaagctcc 3043043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 37663657 - 37663525
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||   |||||||    
T  37663657 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttattaaaaaag 37663558  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||||||||||||||| ||| |||||||||||||    
T  37663557 tcaatttcctgactgtaccgtagaagctccctt 37663525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19440564 - 19440434
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||  |||||||    
T  19440564 tgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaattaatcaaacattaagatcaaaattaacttttttaaaaaag 19440465  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||||||||||||||| |||||||||||    
T  19440464 tcagtttcctgactgcaccgtagaagctccc 19440434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 26896382 - 26896516
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||    
T  26896382 tgcaaacattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcgaacattaaaatcaaaattaacttttttaaaaaa 26896481  T
Q  100 gtcaatttcctgactgcaccatagaagctccctta 134  Q
    |||||||||||||||||||| |||||| |||||||    
T  26896482 gtcaatttcctgactgcaccgtagaagttccctta 26896516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 46888072 - 46887946
Alignment:
Q  3 caagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtc 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  46888072 caagcattactagatgaattactattgatcattaatcactaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaactttttcaaaaaagtc 46887973  T
Q  103 aatttcctgactgcaccatagaagctc 129  Q
    | |||||||| |||||| |||||||||    
T  46887972 agtttcctgattgcaccgtagaagctc 46887946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 37775953 - 37776082
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||  |||||||    
T  37775953 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattgaaattaacttttttaaaaaag 37776052  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    |||||||| |||||||||| ||||||||||    
T  37776053 tcaatttcatgactgcaccgtagaagctcc 37776082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 32912496 - 32912364
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||| |||||||    
T  32912496 tgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatgaattttttcaaaaaa 32912397  T
Q  100 gtcaatttcctgactgcaccatagaagctccct 132  Q
    |||| ||||||||||||||| || |||||||||    
T  32912396 gtcagtttcctgactgcaccgtaaaagctccct 32912364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 33816432 - 33816300
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||    
T  33816432 tgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaag 33816333  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| ||||||||||||| | |||||||||||||    
T  33816332 tcagtttcctgactgcatcgtagaagctccctt 33816300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7703804 - 7703931
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  7703804 tgcaagcattactagatgaattactatttatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 7703903  T
Q  101 tcaatttcctgactgcaccatagaagct 128  Q
    ||| |||| |||||||||| ||||||||    
T  7703904 tcagtttcatgactgcaccgtagaagct 7703931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 29584116 - 29583985
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || | ||||||||||| |||| |||    
T  29584116 tgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaactttttcaaacaag 29584017  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    |||||||| |||||||||| ||||||||||||    
T  29584016 tcaatttcatgactgcaccgtagaagctccct 29583985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 49376265 - 49376392
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||    
T  49376265 aagcattactaaatgaattactattgatcattaatcagtaatcaagaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaagtca 49376364  T
Q  104 atttcctgactgcaccatagaagctccc 131  Q
     ||||||||||||||| |||||||||||    
T  49376365 gtttcctgactgcaccgtagaagctccc 49376392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 30002557 - 30002427
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || | ||||||||||| || |||||    
T  30002557 tgcaagcattactagatgaattactattgatcattaatcagtaataaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaag 30002458  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||| | |||||||| |||||||||||    
T  30002457 tcaatttcataactgcaccgtagaagctccc 30002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 17272259 - 17272391
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| || | ||||||||||| |||| |||    
T  17272259 tgcaagcattactagatgaattactattgatcattaatcggtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaactttttcaaataag 17272358  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||||| |||||||||| |||||||||||||    
T  17272359 tcaatttcatgactgcaccgtagaagctccctt 17272391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 23431850 - 23431982
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||    
T  23431850 tgcaagcattagtagatgaattactattgatcattaattagtaatcaacaatttaaaaatgcatcaaacattaaaattaaaattaactttttcaaaaaag 23431949  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| |||||||||  |||||||||||||    
T  23431950 tcagtttcatgactgcactgtagaagctccctt 23431982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 47254035 - 47254166
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||| ||||||||    
T  47254035 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaag 47254134  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| |||  ||||| |||| ||||||||||||    
T  47254135 tcagtttgatgactccaccgtagaagctccct 47254166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 879464 - 879334
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||   ||||||    
T  879464 tgcaagcattactagatgaattattattgatcattaataagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttttaaaaag 879365  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| |||||| ||||||||||||||||    
T  879364 tcagttttctgactacaccatagaagctccc 879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25700972 - 25700842
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  25700972 tgcaagcattgttagatgaattactattgatcattaatcaataatgtacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaag 25700873  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||||| |||||||| ||||| |||||    
T  25700872 tcaatttcctaactgcaccgtagaaactccc 25700842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 9139524 - 9139653
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| |  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9139524 tgcaagcattactagacgaattactattgatcattaatcaataatcta--atttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaag 9139621  T
Q  101 tcaatttcctgactg--caccatagaagctcc 130  Q
    ||| |||||| ||||  |||||||||||||||    
T  9139622 tcagtttcctcactgcacaccatagaagctcc 9139653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23761366 - 23761499
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  23761366 tgcaagcattactagatgaattattattgatcattaatcagtaatcaataatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 23761465  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| |||| ||||| ||||  | |||||||||||    
T  23761466 tcagtttcatgactacaccgaataagctccctta 23761499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 39400303 - 39400440
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  39400303 tgcaagcattactagatgaatgactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 39400402  T
Q  101 tcaatttcctgactgcaccatagaagctcccttattaa 138  Q
    ||| |||| |||||| ||| ||||| || |||| ||||    
T  39400403 tcagtttcatgactggaccgtagaaacttcctttttaa 39400440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 28002896 - 28002772
Alignment:
Q  7 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatt 106  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||| ||    
T  28002896 cattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagtt 28002797  T
Q  107 tcctgactgcaccatagaagctccc 131  Q
    |||||||||||   |||||||||||    
T  28002796 tcctgactgcagtgtagaagctccc 28002772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 50765015 - 50765143
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||  |||||||    
T  50765015 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttttaaaaaag 50765114  T
Q  101 tcaatttcctgactgcaccatagaagctc 129  Q
    |   |||| ||| |||||| |||||||||    
T  50765115 tttgtttcatgattgcaccgtagaagctc 50765143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 4205279 - 4205410
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||| |||||||||||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| | || |||||||| ||||||||    
T  4205279 tgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaactttttcaaaaaag 4205378  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| |||| |||||||||| ||||||||||||    
T  4205379 tcagtttcttgactgcaccgtagaagctccct 4205410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 32579741 - 32579871
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||||| |||| ||||||||    
T  32579741 tgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcaaacattaagatcaaaattaattttttcaaaaaag 32579840  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| || |||||||| ||||| |||||    
T  32579841 tcagttttctaactgcaccgtagaaactccc 32579871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 32592382 - 32592503
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||    
T  32592382 aagcattactaaatgaattactattgatcgttaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 32592481  T
Q  104 atttcctgactgcaccatagaa 125  Q
    ||||  |||||||||| |||||    
T  32592482 attttatgactgcaccgtagaa 32592503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 37288023 - 37288156
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa-aatcataattaacttttccaaaaaa 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | | | ||||||||||| |||||||    
T  37288023 tgcaagcattattagatgaattactattgagcattaatcagtaatcaataatttaaaaatgaatcaaacattaagatttaaaattaactttttcaaaaaa 37288122  T
Q  100 gtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||| |||| |||||||||| | |||||||||||    
T  37288123 gtcactttcatgactgcaccgtggaagctccctt 37288156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 46884030 - 46883905
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa-cttttccaaaaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||  ||||| ||||||    
T  46884030 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaataaaaattaattttttcaaaaaaa 46883931  T
Q  100 gtcaatttcctgactgcaccatagaa 125  Q
     |||||||  |||||||||| |||||    
T  46883930 atcaattttttgactgcaccgtagaa 46883905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 42200025 - 42200156
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||| |||||||||| ||||||| ||||||||||| ||||||     
T  42200025 tgcaagcattactagatgaatatactactgttcattaatcagtaatcaataatttaaaaattaatcaaacatcaaaatca-aattaactttttcaaaaag 42200123  T
Q  100 gtcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||||||||| |||||| ||||||||||||    
T  42200124 gtcaatttcctgattgcaccgtagaagctccct 42200156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 50697540 - 50697644
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||| |||| |||||||||||    
T  50697540 aagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaattttttcaaaaaagtca 50697639  T
Q  104 atttc 108  Q
     ||||    
T  50697640 gtttc 50697644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1815596 - 1815710
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||   ||||||    
T  1815596 tgcaaacattactagatgaattacaattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt-ttaaaaag 1815694  T
Q  101 tcaatttcctgactgc 116  Q
    ||||||| ||||||||    
T  1815695 tcaattttctgactgc 1815710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4598277 - 4598407
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||| |||   ||||||    
T  4598277 tgcaagcattattagattaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacattttacaaaaag 4598376  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| |||||||||| |||||||||||    
T  4598377 tcagtttcatgactgcaccgtagaagctccc 4598407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35025482 - 35025381
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| || |||||    
T  35025482 tgcaagcattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacatt-aaatcaaaattaactttttcataaaag 35025384  T
Q  101 tca 103  Q
    |||    
T  35025383 tca 35025381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 17168008 - 17168140
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| | || ||| |||| ||||||||    
T  17168008 tgcaagcatcactagatgaattactatttatcattaattagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaattttttcaaaaaag 17168107  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| | |||||||| ||||| |||||||    
T  17168108 tcagtttctttactgcaccgtagaaactccctt 17168140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 17173585 - 17173717
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||| |||||||||||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| | || ||| |||| ||||||||    
T  17173585 tgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaattttttcaaaaaag 17173684  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| |||||||||| ||||| |||||||    
T  17173685 tcagtttcttgactgcaccgtagaaactccctt 17173717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 33341696 - 33341808
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| ||||  ||||||||||    
T  33341696 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaatttttttaaaaaagtca 33341795  T
Q  104 atttcctgactgc 116  Q
     | || |||||||    
T  33341796 gtatcatgactgc 33341808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 35020951 - 35020815
Alignment:
Q  1 tgcaagcattactagatgaattactat----tgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaa 96  Q
    ||||| |||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||  |||    
T  35020951 tgcaaacattactagatgaattactatatattgatcattaatcggtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaa 35020852  T
Q  97 aaagtcaatttcctgactgcaccatagaagctccctt 133  Q
    | ||||| ||| |||||| |||| |||||||||||||    
T  35020851 agagtcagttttctgactacaccgtagaagctccctt 35020815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7152120 - 7152018
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | || |||||||| ||||||||    
T  7152120 tgcaagcattattagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatgaaaaataactttttcaaaaaag 7152021  T
Q  101 tca 103  Q
    |||    
T  7152020 tca 7152018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 55241021 - 55240891
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || | |||||| |||| ||||||||    
T  55241021 tgcaaacattactagataaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaattaaatttttcaaaaaag 55240922  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| | |||||||| |||||| ||||    
T  55240921 tcagtttcataactgcaccgtagaagttccc 55240891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 38012568 - 38012688
Alignment:
Q  12 ctagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctg 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||| ||||||||||| ||||||| | | |||||||    
T  38012568 ctagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcgaacattaagatcaaaattaactttttcaaaaaaattagtttcctg 38012667  T
Q  112 actgcaccatagaagctccct 132  Q
    |||||||  || |||||||||    
T  38012668 actgcactgtaaaagctccct 38012688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 55477807 - 55477717
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||||    
T  55477807 tgcaagcattactagatgaattactattaatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaattttt 55477717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 27396911 - 27397037
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || | |||||||||||   |||||     
T  27396911 tgcaagcattactagatgaattactattgatcattaat--gtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttttaaaaaa 27397008  T
Q  101 tcaatttcctgactgcaccatagaagctc 129  Q
    ||| |||| ||| |||||| || ||||||    
T  27397009 tcagtttcatgattgcaccgtaaaagctc 27397037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34948011 - 34947923
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactt 89  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||||||    
T  34948011 tgcaagcattactagatgaaatactattgatcgttaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactt 34947923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 5047874 - 5047752
Alignment:
Q  9 ttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttc 108  Q
    ||||||||| ||||| ||||||||| ||||||  ||| ||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||  ||||    
T  5047874 ttactagataaattattattgatcagtaatcaacaataaacaatttaaaaatgaatcgaacattaaaatcaaaattaattttttcaaaaaagtctgtttc 5047775  T
Q  109 ctgactgcaccatagaagctccc 131  Q
    ||||||||||| || ||||||||    
T  5047774 ctgactgcaccgtaaaagctccc 5047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 4934129 - 4934001
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaa-tttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    |||| |||||| |||||||||| ||||| ||||||||||||||||||| || ||||||||| ||| ||||||||| |||| ||||||||| | |||||||    
T  4934129 tgcacgcattaatagatgaatttctattaatcattaatcagtaatcaaaaattttaaaaataaattaaacattaagatcaaaattaacttgttcaaaaaa 4934030  T
Q  100 gtcaatttcctgactgcaccatagaagct 128  Q
    |||| |||  ||||| || |||| |||||    
T  4934029 gtcagtttattgactacatcatataagct 4934001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 47073108 - 47073059
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||||| ||||| ||||||||| |||||| |||||||||||| |||||    
T  47073108 taactttttcaaaatagtcaatttactgactacaccatagaagcaccctt 47073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 43648152 - 43648024
Alignment:
Q  2 gcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagt 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  43648152 gcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagt 43648053  T
Q  102 caatttcctgactgcaccatagaagctcc 130  Q
    |||||||||||||||||| ||||||||||    
T  43648052 caatttcctgactgcaccgtagaagctcc 43648024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 33660285 - 33660149
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || |||||    
T  33660285 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcagaaaag 33660186  T
Q  101 tcaatttcctgactgcaccatagaagctcccttatta 137  Q
    ||| |||| |||||||||| |||||||||||||||||    
T  33660185 tcagtttcatgactgcaccgtagaagctcccttatta 33660149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 35959187 - 35959317
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  35959187 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaag 35959286  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||  ||| |||||| |||||||||||    
T  35959287 tcaattttttgagtgcaccgtagaagctccc 35959317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 41961135 - 41961265
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||     
T  41961135 tgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaat 41961234  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||||||||||||||| |||||||||||    
T  41961235 tcagtttcctgactgcaccgtagaagctccc 41961265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 26357872 - 26358003
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  26357872 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaag 26357971  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||| || ||||||   ||||||||||||    
T  26357972 tcaattttctaactgcaatgtagaagctccct 26358003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 29242046 - 29241923
Alignment:
Q  8 attactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaattt 107  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||    
T  29242046 attactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaagttcagttt 29241947  T
Q  108 cctgactgcaccatagaagctccc 131  Q
    ||||||||||||||||||||||||    
T  29241946 cctgactgcaccatagaagctccc 29241923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11366289 - 11366155
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  11366289 tgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaa 11366190  T
Q  100 gtcaatttcctgactgcaccatagaagctccctta 134  Q
     ||||||| ||||||||||| |||| |||||||||    
T  11366189 atcaattttctgactgcaccgtagatgctccctta 11366155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19289231 - 19289101
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||    
T  19289231 tgcaagcattactagatgaattactattgatcattaatcagaaattaacaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaag 19289132  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||||| ||||||||||||||||||||    
T  19289131 tcagtttcctaactgcaccatagaagctccc 19289101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 31862153 - 31862278
Alignment:
Q  7 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||| ||||||||||| ||    
T  31862153 cattactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaactttttcaaaaaagtcagtt 31862252  T
Q  107 tcctgactgcaccatagaagctccct 132  Q
    ||| ||||||||||||||||||||||    
T  31862253 tcccgactgcaccatagaagctccct 31862278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 2325286 - 2325154
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||  ||||||     
T  2325286 tgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaactttttaaaaaaaa 2325187  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||||||| ||||||||||| |||||||||||||    
T  2325186 tcaattttctgactgcaccgtagaagctccctt 2325154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 18494186 - 18494052
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||    
T  18494186 aagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 18494087  T
Q  104 atttcctgactgcaccatagaagctcccttattaa 138  Q
     |||| ||||| |||| || |||||||||||||||    
T  18494086 gtttcatgactacaccgtataagctcccttattaa 18494052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19424550 - 19424420
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||| ||||||||    
T  19424550 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaag 19424451  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||  |||||||||| |||||||||||    
T  19424450 tcagtttgatgactgcaccgtagaagctccc 19424420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 4167217 - 4167348
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| || | ||||||||||| ||||||||    
T  4167217 tgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaag 4167316  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||| ||||||||||| ||||||||||||    
T  4167317 tcaattttctgactgcaccgtagaagctccct 4167348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 4763926 - 4764059
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaac-ttttccaaaaaa 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||   |||||    
T  4763926 tgcaagcattactagttgaattactattgatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaacttttttttaaaaa 4764025  T
Q  100 gtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||| |||||| |||||||| |||||||||||||    
T  4764026 gtcagtttccttactgcaccgtagaagctccctt 4764059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 33709140 - 33709015
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||     
T  33709140 tgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaat 33709041  T
Q  101 tcaatttcctgactgcaccatagaag 126  Q
    ||| | || |||||||||| ||||||    
T  33709040 tcagtatcatgactgcaccgtagaag 33709015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 7006846 - 7006715
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||| ||||||||    
T  7006846 tgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattatgattaaaattaactttttcaaaaaag 7006747  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| ||| |||||| ||| |||||||||    
T  7006746 tcattttcatgattgcaccgtag-agctccctt 7006715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 19500823 - 19500693
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| | |||| ||||||||    
T  19500823 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaatt-attttttcaaaaaag 19500725  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    | |||||  ||||||||||||||||| ||||||    
T  19500724 t-aattttttgactgcaccatagaagatccctt 19500693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 3177236 - 3177362
Alignment:
Q  3 caagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtc 102  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||| |||||||||||||||| | || |||||||| ||||||||||    
T  3177236 caagcattactagatgaattactatttatcatgaataagtaatcaacaatttgaaaataaatcaaacattaaaattaaaagtaactttttcaaaaaagtc 3177335  T
Q  103 aatttcctgactgcaccatagaagctc 129  Q
    | ||||||||||||||| |||||||||    
T  3177336 agtttcctgactgcaccgtagaagctc 3177362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 41465796 - 41465929
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| ||||||||||| ||||||||    
T  41465796 tgcaaacattactatatgaattactattgatcattaatcagcaatcaacaatttaaaattgaatcgaacattaagatcaaaattaactttttcaaaaaag 41465895  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| ||| || ||||||||||| || ||||||||    
T  41465896 tcagttttctaactgcaccatataaactccctta 41465929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27349856 - 27349730
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||     ||||||||||| || |||||    
T  27349856 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatatttaa-----aattaactttttcagaaaag 27349762  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| |||| |||||||||  ||||||||||||    
T  27349761 tcagtttcatgactgcactgtagaagctccct 27349730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31570642 - 31570526
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| | |||||||||||  |||||||    
T  31570642 tgcaagcattgctagatgaattactattgatcattaatcagtaatcaaatatttaaaaatgaatcaatcattaaaatgaaaattaactttttaaaaaaag 31570543  T
Q  101 tcaatttcctgactgca 117  Q
    ||| |||| ||||||||    
T  31570542 tcagtttcatgactgca 31570526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5881824 - 5881931
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | ||||||||||| || ||||     
T  5881824 tgcaagcattactagatgaattactattgatcattattcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcataaaaa 5881923  T
Q  101 tcaatttc 108  Q
    ||| ||||    
T  5881924 tcagtttc 5881931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37906005 - 37906112
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg-aatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| |||| |||||||    
T  37906005 tgcaagaattactggatgaattactattgatcattaatcagtaattaacaatttaaaaatgaaatcaaacattaaaatcaaaattaattttttcaaaaaa 37906104  T
Q  100 gtcaattt 107  Q
    ||||||||    
T  37906105 gtcaattt 37906112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 43770756 - 43770649
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  43770756 tgcaagcattactagatgaatttctattgatcattaattagaaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 43770657  T
Q  101 tcaatttc 108  Q
    ||| ||||    
T  43770656 tcagtttc 43770649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 39167273 - 39167150
Alignment:
Q  5 agcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaa 104  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| ||||||||| || | ||||||||||| |||||||||||     
T  39167273 agcattactagatgaattactattaattatgaatcagtaatcaacaatttaaaaatgaataaaacattaagattaaaattaactttttcaaaaaagtcag 39167174  T
Q  105 tttcctgactgcaccatagaagct 128  Q
    ||| |||| |||||  ||||||||    
T  39167173 ttttctgattgcacagtagaagct 39167150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 44913977 - 44914090
Alignment:
Q  16 atgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactg 115  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||  || ||| |||||||    
T  44913977 atgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaaccagtttgctgactg 44914076  T
Q  116 caccatagaagctc 129  Q
    |||| |||||||||    
T  44914077 caccgtagaagctc 44914090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 13711754 - 13711878
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||| | |||||| |||| ||||||||    
T  13711754 tgcaaacaatactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaatcatttaaattaaaattaattttttcaaaaaag 13711853  T
Q  101 tcaatttcctgactgcaccatagaa 125  Q
     ||||||  | |||||||| |||||    
T  13711854 acaattttataactgcaccgtagaa 13711878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 41051205 - 41051083
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||||||||||||||||| | |||||| |||| |||||   |||    
T  41051205 aagcattgctagatgaattgttattgatcattaatcaataatcaacaattcaaaaatgaatcaaacattaaaattaaaattaattttttcaaaa---tca 41051109  T
Q  104 atttcctgactgcaccatagaagctc 129  Q
     |||| |||||||||| |||||||||    
T  41051108 ttttcatgactgcaccgtagaagctc 41051083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 33902317 - 33902439
Alignment:
Q  9 ttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaac-ttttccaaaaaagtcaattt 107  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||| ||||||| ||||  |||||||| | |||    
T  33902317 ttactagatgaattattattgattattaatctgtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttttttaaaaaaagttagttt 33902416  T
Q  108 cctgactgcaccatagaagctcc 130  Q
     |||| |||||| ||||||||||    
T  33902417 tctgattgcaccgtagaagctcc 33902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 45328028 - 45328116
Alignment:
Q  44 atcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctt 133  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||    
T  45328028 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttt-ctgactgcaccgtagaagctccctt 45328116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33550895 - 33550801
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaat----cagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    ||||||||||||||||||||| ||||||||| ||| ||    |||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  33550895 tgcaagcattactagatgaataactattgattatttattaaccagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 33550801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18257446 - 18257344
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| ||||||||| ||  ||||| || | ||||||||||| || |||||    
T  18257446 tgcaagcattactagatgaattattatttatcattaatcagtaatcgacaattttaaaatgaataaattattaatattaaaattaactttttcacaaaag 18257347  T
Q  101 tca 103  Q
    |||    
T  18257346 tca 18257344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4478660 - 4478717
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaa 58  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4478660 tgcaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaa 4478717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 41463492 - 41463408
Alignment:
Q  7 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    ||||| ||||| |||||||||||||||||||||| |||| || |||||||||||||||||| |||||| || | |||||||||||    
T  41463492 cattaatagataaattactattgatcattaatcaataattaataatttaaaaatgaatcaatcattaagattaaaattaactttt 41463408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4263984 - 4263926
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaa 59  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  4263984 tgcaagcattactagatgaaataatattgatcattgatcagtaatcaacaatttaaaaa 4263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19314142 - 19314186
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaat 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19314142 tgcaagcattactagatgaattactattgatcattaatcagtaat 19314186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 36642296 - 36642364
Alignment:
Q  66 aaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctta 134  Q
    |||||||||||| | ||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  36642296 aaacattaaaattaaaattagctttttcaaaaaagtcaatttcatgaatgcaccatagaagctccctta 36642364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 17054005 - 17053961
Alignment:
Q  35 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatca 79  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||    
T  17054005 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatca 17053961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 17071646 - 17071602
Alignment:
Q  35 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatca 79  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||    
T  17071646 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatca 17071602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44286244 - 44286285
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagt 42  Q
    ||||||||||  ||||||||||||||||||||||||||||||    
T  44286244 tgcaagcattgttagatgaattactattgatcattaatcagt 44286285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 27138730 - 27138682
Alignment:
Q  88 ttttccaaaaaagtcaatttcctgactgcaccatagaagctcccttatt 136  Q
    ||||| |||||| ||||||| ||||||||||||||||||| || |||||    
T  27138730 ttttctaaaaaaatcaattttctgactgcaccatagaagcccctttatt 27138682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 1149528 - 1149397
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||    
T  1149528 tgcaagcattactagatgaattactattgatcattaatcggtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattttttcaaaaaag 1149429  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||||||||||||||| ||||||||||||    
T  1149428 tcaatttcctgactgcaccgtagaagctccct 1149397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16446771 - 16446640
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  16446771 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatctaacattaaaatcaaaattaactttttcaaaaaag 16446672  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| ||||||||||||||| ||||||||||||    
T  16446671 tcagtttcctgactgcaccgtagaagctccct 16446640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 43643491 - 43643358
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  43643491 tgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaag 43643392  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| ||| ||||||||||||||||||||||||||    
T  43643391 tcagttttctgactgcaccatagaagctccctta 43643358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 34895256 - 34895388
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  34895256 tgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaag 34895355  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||||||| |||||||| |||||||||||||    
T  34895356 tcaatttcctaactgcaccgtagaagctccctt 34895388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 35859228 - 35859360
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  35859228 tgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaag 35859327  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| ||||||||||||||| ||||| |||||||    
T  35859328 tcagtttcctgactgcaccgtagaaactccctt 35859360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 37970415 - 37970284
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  37970415 tgcaagcattactagatgaattactgttgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaag 37970316  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| ||||||||||||||||||||||||||||    
T  37970315 tcactttcctgactgcaccatagaagctccct 37970284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 5299842 - 5299710
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || | ||||||||||| ||||||||    
T  5299842 tgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaag 5299743  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| ||||||||||||||||||||||||    
T  5299742 tcagtttcatgactgcaccatagaagctccctt 5299710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 4132582 - 4132447
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||    
T  4132582 tgcaagcattactagatgaattactattgatcattaatttgtaatcaacaatttaaaaatgaattacacattaagatcaaaattaacttttccaaaaaag 4132483  T
Q  101 tcaatttcctgactgcaccatagaagctcccttatt 136  Q
    ||| ||| ||||||||||||||||||||||| ||||    
T  4132482 tcagtttgctgactgcaccatagaagctcccctatt 4132447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 7890853 - 7890723
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  7890853 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaactttttcaaaaaag 7890754  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| |||| ||||| |||||||||||    
T  7890753 tcagtttcatgaccgcaccgtagaagctccc 7890723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23854327 - 23854200
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||     
T  23854327 tgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaa- 23854229  T
Q  101 tcaatttcctgactgcaccatagaagctc 129  Q
    |||||||||||||| ||||||| ||||||    
T  23854228 tcaatttcctgactacaccataaaagctc 23854200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 8803713 - 8803594
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  8803713 tgcaagcattaccagatgaatatactattgatcattaatcagtaatgaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 8803614  T
Q  100 gtcaatttcctgactgcacc 119  Q
    ||||||||||||||||||||    
T  8803613 gtcaatttcctgactgcacc 8803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 41362723 - 41362845
Alignment:
Q  8 attactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaattt 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| |||||| |||| ||||||||||| |||    
T  41362723 attactagatgaattactattgatcattaaccagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttcaaaaaagtcagttt 41362822  T
Q  108 cctgactgcaccatagaagctcc 130  Q
    |||||||||||||||||||||||    
T  41362823 cctgactgcaccatagaagctcc 41362845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 466126 - 466253
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | |||||||     
T  466126 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttattcaaaaaaa 466225  T
Q  101 tcaatttcctgactgcaccatagaagct 128  Q
    ||| |||| |||||||||| ||||||||    
T  466226 tcagtttcatgactgcaccgtagaagct 466253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 38644272 - 38644402
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| || | ||||||||||| ||||||||    
T  38644272 tgcaagcattactagatgaattactattgatcattaatcagtaatcaaaaatttaaaaataaatcaaacattaagattaaaattaactttttcaaaaaag 38644371  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| |||||||||| || ||||||||    
T  38644372 tcagtttcatgactgcaccgtaaaagctccc 38644402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 11727318 - 11727451
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa- 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || | |||||||||||  ||||||     
T  11727318 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaacttttttaaaaaat 11727417  T
Q  100 gtcaatttcctgactgcaccatagaagctccctt 133  Q
    ||||||||| |||||||||| |||||||||||||    
T  11727418 gtcaatttcatgactgcaccgtagaagctccctt 11727451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44869791 - 44869907
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  44869791 tgcaagcattactagatgaattactattgatcattaatcagtaaccaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaag 44869890  T
Q  101 tcaatttcctgactgca 117  Q
    ||| |||| | ||||||    
T  44869891 tcagtttcataactgca 44869907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16223157 - 16223290
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa---cttttccaaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    ||||   |||    
T  16223157 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattttttttttcaaa 16223256  T
Q  98 aagtcaatttcctgactgcaccatagaagctccc 131  Q
    |||||| ||| ||||||| |||||||||||||||    
T  16223257 aagtcagttttctgactggaccatagaagctccc 16223290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 33198096 - 33198227
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || |  |||||||||| ||||||||    
T  33198096 tgcaagcatcactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaagattaactttttcaaaaaag 33198195  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    |||||||| ||| |||||| ||||||||||||    
T  33198196 tcaatttcatgattgcaccgtagaagctccct 33198227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 1953884 - 1953751
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||| |||| |||||||     
T  1953884 tgcaagcattattagatgaattactattgatcattaatcaataatcaacaattttaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaaa 1953785  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| ||||||||||||||| ||||| ||| ||||    
T  1953784 tcagtttcctgactgcaccgtagaaactctctta 1953751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 18259373 - 18259498
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||| ||||||||| | ||||||| ||| ||||||||    
T  18259373 tgcaagcattactagatgaattattgttgatcagtaatgagtaatcaacaatttaaaaatgaatcaatcattaaaattaaaattaaccttttcaaaaaag 18259472  T
Q  101 tcaatttcctgactgcaccatagaag 126  Q
    |||||||| |||||||||||||||||    
T  18259473 tcaatttcatgactgcaccatagaag 18259498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12587876 - 12588000
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||| ||||||||    
T  12587876 tgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaag 12587975  T
Q  101 tcaatttcctgactgcaccatagaa 125  Q
    ||| ||  || |||| |||||||||    
T  12587976 tcagttctctaactgaaccatagaa 12588000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35459607 - 35459491
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  35459607 tgcaaacattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaag 35459508  T
Q  101 tcaatttcctgactgca 117  Q
    ||| ||| || ||||||    
T  35459507 tcagttttctaactgca 35459491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 31933776 - 31933653
Alignment:
Q  7 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatt 106  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| |||||| |||| ||||||||||| ||    
T  31933776 cattactagatgaattattattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaattttttcaaaaaagtcagtt 31933677  T
Q  107 tcctgactgcaccatagaagctcc 130  Q
    |||  |||||||||||||||||||    
T  31933676 tcccaactgcaccatagaagctcc 31933653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1205221 - 1205351
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||  || |||| |||||||||||  |||||||    
T  1205221 tgcaagtattactagatgaattactattgatcattaatcactaatcagcaatttaaaaatgaatcaaacaacaagatcaaaattaacttttttaaaaaag 1205320  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||||||| |||||| |||| |||||||||||    
T  1205321 tcaattttctgactacaccgtagaagctccc 1205351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6098409 - 6098311
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  6098409 tgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcatgattaactttcccaaaaaa 6098311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 34951945 - 34951826
Alignment:
Q  9 ttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttc 108  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| || |||||||| ||||    
T  34951945 ttactacatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcagtttc 34951846  T
Q  109 ctgactgcaccatagaagct 128  Q
     ||| |||||| ||||||||    
T  34951845 atgattgcaccgtagaagct 34951826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 30654479 - 30654348
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    |||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| ||||||||||| |||||||    
T  30654479 tgcaagcattactaaatgaatatattattgatcattaatcagtaattaacaatttaaaa-tgaatcaaatattaaaatcaaaattaactttttcaaaaaa 30654381  T
Q  100 gtcaatttcctgactgcaccatagaagctccct 132  Q
     ||| ||||||||||||||| ||||| ||||||    
T  30654380 atcagtttcctgactgcaccgtagaaactccct 30654348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 33906506 - 33906634
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||| || | ||| |||| ||||||||||| ||||||||    
T  33906506 tgcaagcattactagatgaattactattgatcattaatcagcaatca--aatttaaaaatgaatcgaatagtaagatcaaaattaactttttcaaaaaag 33906603  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| ||||||||||  |||||||||||    
T  33906604 tcagttttctgactgcactgtagaagctccc 33906634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10555100 - 10554970
Alignment:
Q  1 tgcaagcattactagatgaattac--tattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa-cttttccaaaa 97  Q
    ||||||||||||||||||||||||  |||||||||||||   ||||| |||||||||||||||||||||||||||| |||| ||||||  |||| |||||    
T  10555100 tgcaagcattactagatgaattacactattgatcattaa---gtaataaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttttcaaaa 10555004  T
Q  98 aagtcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||||| ||||| |||||||||||||||||    
T  10555003 aagtcaattttctgaccgcaccatagaagctccc 10554970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24823290 - 24823200
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| || | |||||||||||    
T  24823290 tgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaactttt 24823200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27082734 - 27082636
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||    
T  27082734 tgcaagcattactagatgaattactacttatcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaa 27082636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 36694862 - 36694730
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||| |||||||||||||||||| ||||| ||| ||||||||| ||||||||||| |||||||||||||||| | || |||||||| |||||||     
T  36694862 tgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaataaatcaaacattaaaattaaaagtaactttttcaaaaaaa 36694763  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| | |||||| | |||||||||||||    
T  36694762 tcagtttcttcactgcatcgtagaagctccctt 36694730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 39099015 - 39098891
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||||||||| | |||||| ||||  ||||||     
T  39099015 tgcaagcattactagatgaattactattgatcattaattaataatcaataatttaaaaatgcatcaaacattaaaattaaaattaatttttttaaaaaaa 39098916  T
Q  101 tcaatttcctgactgcaccatagaa 125  Q
    ||| |||| ||| |||||| |||||    
T  39098915 tcagtttcatgattgcaccgtagaa 39098891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 40862713 - 40862824
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattt-aaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||| ||||||| |||||||||||||||||||| || | || |||||||| |||||||    
T  40862713 tgcaagcattactagatgaattactatttgtcataaatcagtaatcgacaatttaaaaaatgaatcaaacattaagattaaaagtaactttttcaaaaaa 40862812  T
Q  100 gtcaatttcctg 111  Q
    ||||||||||||    
T  40862813 gtcaatttcctg 40862824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 43025974 - 43026100
Alignment:
Q  7 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaac-ttttccaaaaaagtcaat 105  Q
    ||||| ||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||| |||||    
T  43025974 cattattagataaattactattgatcatgaatcagtgatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttcaaaaaaatcaat 43026073  T
Q  106 ttcctgactgcaccatagaagctccct 132  Q
    ||||| || |||   ||||||||||||    
T  43026074 ttcctaaccgcagtttagaagctccct 43026100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1149816 - 1149756
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1149816 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg 1149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 12876409 - 12876515
Alignment:
Q  6 gcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaat 105  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||| ||| ||||| |||||||||||||||| | || ||||||||  |||||||||| |    
T  12876409 gcattactagatgaattactatttatcatgaataagtaatcaacagtttgaaaataaatcaaacattaaaattaaaagtaacttttttaaaaaagtcagt 12876508  T
Q  106 ttcctga 112  Q
    |||||||    
T  12876509 ttcctga 12876515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9864442 - 9864509
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaa 68  Q
    ||||||||||||||||||||| |||| | ||||| |||| ||||||||||||||||||||||||||||    
T  9864442 tgcaagcattactagatgaataactagtaatcatgaatcggtaatcaacaatttaaaaatgaatcaaa 9864509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 13307931 - 13308005
Alignment:
Q  59 atgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||||||||||||| || | ||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||    
T  13307931 atgaatcaaacattaagattaaaattaactttttcaaaatagtcaatttcatgattgcaccatagaagctccctt 13308005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 30650946 - 30650896
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctta 134  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  30650946 taactttttcaaaaaagtcaatttcttgactgcaccgtagaagctccctta 30650896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 41910895 - 41910822
Alignment:
Q  60 tgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctt 133  Q
    ||||||||||||| | || | |||||||||||  ||||||||||| ||  ||||||||||||||||||||||||    
T  41910895 tgaatcaaacattcagattaaaattaacttttttaaaaaagtcaaattaatgactgcaccatagaagctccctt 41910822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 9864545 - 9864594
Alignment:
Q  81 aattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctcc 130  Q
    ||||||||||| ||||||||||| |||||| |||||||| ||||||||||    
T  9864545 aattaactttttcaaaaaagtcagtttcctaactgcaccttagaagctcc 9864594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 5018564 - 5018606
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaag 126  Q
    |||||||| |||||||||||||||| ||| |||||||||||||    
T  5018564 taactttttcaaaaaagtcaatttcgtgattgcaccatagaag 5018606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 34686112 - 34686156
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaagctc 129  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||    
T  34686112 taacttttccaaaaaagtc-agttcctgactgcaccgtagaagctc 34686156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17842475 - 17842345
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  17842475 tgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttccaaaaaag 17842376  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||| |||||||||| |||||||||||    
T  17842375 tcaatttcttgactgcaccgtagaagctccc 17842345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37110144 - 37110274
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||     
T  37110144 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttccaaaaaaa 37110243  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||| |||||||||| |||||||||||    
T  37110244 tcaatttcttgactgcaccgtagaagctccc 37110274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 30055797 - 30055929
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||  ||||||||    
T  30055797 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaag 30055896  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||||||||||||||||||| |||||||||||||    
T  30055897 tcaatttcctgactgcaccgtagaagctccctt 30055929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 24212011 - 24212140
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  24212011 tgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 24212110  T
Q  100 gtcaatttcctgactgcaccatagaagctc 129  Q
    |||| ||||||||||||||| |||||||||    
T  24212111 gtcagtttcctgactgcaccgtagaagctc 24212140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 31520632 - 31520499
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  31520632 tgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaag 31520533  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| |||||| |||||||||||||||||||||||    
T  31520532 tcagtttcctaactgcaccatagaagctccctta 31520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 9355717 - 9355590
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  9355717 tgcaagcattactagatgaattgctattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaag 9355618  T
Q  101 tcaatttcctgactgcaccatagaagct 128  Q
    ||| ||||||| ||||||||||||||||    
T  9355617 tcagtttcctgcctgcaccatagaagct 9355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 37703389 - 37703258
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||    
T  37703389 tgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaag 37703290  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||| ||||||||||||||||||||||||    
T  37703289 tcaatttactgactgcaccatagaagctccct 37703258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 7335063 - 7335193
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||| |||| ||||||||    
T  7335063 tgcaagcattactagatgaattactattaatcattaatcagaaatcaataatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaag 7335162  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||||||||||||||||||||||||||    
T  7335163 tcaatttcctgactgcaccatagaagctccc 7335193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18797597 - 18797730
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||    
T  18797597 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaag 18797696  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||| ||| ||||||||| |||| |||||||||||    
T  18797697 tcagttttctgactgcatcataaaagctccctta 18797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 31578955 - 31578831
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  31578955 tgcaagcattactagatgaattactattgatcattaatcaataatcaataatttaaaaatgaatcaaacaataaaatcaaaattaactttttcaaaaaag 31578856  T
Q  101 tcaatttcctgactgcaccatagaa 125  Q
    ||| |||||||||||||||||||||    
T  31578855 tcagtttcctgactgcaccatagaa 31578831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 37704452 - 37704584
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||  ||||  |||||||||||||    
T  37704452 tgcaagcattaccagatgaattactattgatcattaattagtaatcaacaatttacaaatgaatcaaacattaaaatcaagattagtttttccaaaaaag 37704551  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||||||||||||||||||| ||||||||||    
T  37704552 tcaatttcctgactgcaccataaaagctccctt 37704584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 35353378 - 35353508
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||    
T  35353378 tgcaagcattactagatgaatcactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaag 35353477  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||||||||||||||| |||||||||||    
T  35353478 tcagtttcctgactgcaccttagaagctccc 35353508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 6546790 - 6546919
Alignment:
Q  2 gcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||| |||||||||    
T  6546790 gcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagt 6546889  T
Q  102 caatttcctgactgcaccatagaagctccc 131  Q
    || |||| |||||||||| |||||||||||    
T  6546890 cagtttcatgactgcaccgtagaagctccc 6546919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 27284014 - 27284145
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat-gaatcaaacattaaaatcataattaa-cttttccaaaaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| |||||| |||||    
T  27284014 tgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaataaaatcaaacattaaaatcaaaattaatcttttcaaaaaa 27284113  T
Q  99 agtcaatttcctgactgcaccatagaagctcc 130  Q
    ||||||||||||||||||||| ||||||||||    
T  27284114 agtcaatttcctgactgcaccgtagaagctcc 27284145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 44411431 - 44411304
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  44411431 tgcaagcattactagatgaattaatattgaccattaatcagtaatcaacaatttaaaaatgaatgaaacattaagatcataattaacctttccaaaaaag 44411332  T
Q  101 tcaatttcctgactgcaccatagaagct 128  Q
    | | |||||||||||||||||| |||||    
T  44411331 ttagtttcctgactgcaccatataagct 44411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 29173792 - 29173922
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  29173792 tgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaag 29173891  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| ||| ||||||||| | |||||||||||    
T  29173892 tcagttttctgactgcatcgtagaagctccc 29173922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 46481020 - 46480905
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||    
T  46481020 tgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaataaaacattaagatcataattaactttttcaaaaaag 46480921  T
Q  101 tcaatttcctgactgc 116  Q
    ||| ||||||||||||    
T  46480920 tcagtttcctgactgc 46480905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 12390540 - 12390410
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||  ||||||||| |||| ||||||||||||||||||||    
T  12390540 tgcaaccattactagatgaattactatttatcattaatcagtaattgacaatttaaaaatgaaataaacattaagatcaaaattaacttttccaaaaaag 12390441  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||||||||| |||| |||||||||||    
T  12390440 tcaatttcctgacttcaccgtagaagctccc 12390410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 26587983 - 26587851
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | ||||||||||| ||||||||    
T  26587983 tgcaggcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaactttttcaaaaaag 26587884  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||| ||| ||| || |||||||||||||    
T  26587883 tcagtttcatgattgcgccgtagaagctccctt 26587851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 38258867 - 38258979
Alignment:
Q  19 aattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| ||| ||||||||||    
T  38258867 aattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagttttctgactgcac 38258966  T
Q  119 catagaagctccc 131  Q
    | |||||||||||    
T  38258967 cgtagaagctccc 38258979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 15612650 - 15612520
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||| || | |||||||||||  |||||||    
T  15612650 tgcaagcattactagatgaattattgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttaaaaaaag 15612551  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||| |||| |||||||||| |||||||||||    
T  15612550 tcagtttcatgactgcaccgtagaagctccc 15612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 37347291 - 37347399
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  37347291 tgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaag 37347390  T
Q  101 tcaatttcc 109  Q
    ||| |||||    
T  37347391 tcagtttcc 37347399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 4583189 - 4583320
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| || | ||||||||||| ||||||||    
T  4583189 tgcaagcattactggatgaattactattaatcatgaatcagtcatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaag 4583288  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||||||| ||| ||||||| ||||||||||||    
T  4583289 tcaattttctggctgcaccgtagaagctccct 4583320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 8861555 - 8861686
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| || | ||||||||||| ||||||||    
T  8861555 tgcatgcattactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacactaagattaaaattaactttttcaaaaaag 8861654  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| |||| | |||||||| | ||||||||||    
T  8861655 tcagtttcatcactgcaccgttgaagctccct 8861686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 26980576 - 26980707
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| |||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||| || | ||||||||||| ||||||||    
T  26980576 tgcaagtattactagatgaattattgttgatcattaatcggtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaag 26980675  T
Q  101 tcaatttcctgactgcaccatagaagctccct 132  Q
    ||| |||| |||||||||| ||||||||||||    
T  26980676 tcagtttcatgactgcaccttagaagctccct 26980707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10359105 - 10358975
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| ||||||||||| ||||||||    
T  10359105 tgcaagcattactaaatgatttactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattatgatcaaaattaactttttcaaaaaag 10359006  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    | | |||| | |||||||| |||||||||||    
T  10359005 ttagtttcttaactgcaccgtagaagctccc 10358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 32432722 - 32432851
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||| || | || ||||||||  |||||||    
T  32432722 tgcaagcattactagatgaattattattaatcatgaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaagtaacttttttaaaaaag 32432821  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    ||| ||||||||||||||| ||||||||||    
T  32432822 tcagtttcctgactgcaccgtagaagctcc 32432851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 23111465 - 23111589
Alignment:
Q  4 aagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| | |||||||||  ||||||||||    
T  23111465 aagcattactagaagaattactattgatcataaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaagttaacttttttaaaaaagtca 23111564  T
Q  104 atttcctgactgcaccatagaagct 128  Q
     ||| ||||||| ||| ||||||||    
T  23111565 gttttctgactgtaccgtagaagct 23111589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 41764969 - 41764839
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||| |||| ||||||| ||| ||||||||    
T  41764969 tgcaagcattactggatgaattattattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaag 41764870  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||||||||| |||| |||| ||||| |||||    
T  41764869 tcaatttcccgactccaccgtagaaactccc 41764839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10481875 - 10481996
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||| ||| ||||| |||| ||||||||||| ||||||||    
T  10481875 tgcaagtattactagatgaattactattgatcgttaatcagtaattaacaatttaaaaataaattaaatattaagatcaaaattaactttttcaaaaaag 10481974  T
Q  101 tcaatttcctgactgcaccata 122  Q
    ||| ||| ||||||||||||||    
T  10481975 tcagttttctgactgcaccata 10481996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11071473 - 11071558
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa 86  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11071473 tgcaaacattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa 11071558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 45936575 - 45936676
Alignment:
Q  159 ttgttaacttcaggcagatatgagcaagaattttccagtaccttatacaagcacaacatacatgtgtatcttgggaagtattcaatgtgtgttcattgcc 258  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| |||| ||||||||||||||||||||    
T  45936575 ttgttaatttcaggcagatatgagcaagaattttccagtaccttatacaagcacagcctacatgtgtttcttggcaagttttcaatgtgtgttcattgcc 45936674  T
Q  259 tt 260  Q
    ||    
T  45936675 tt 45936676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 15672650 - 15672532
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||  | | |||||| |||| ||||||||    
T  15672650 tgcaagcattactagatgaattactattgatcatgcatcaataatcaacaatttaaaaatgaattaaacattaaggttaaaattaattttttcaaaaaag 15672551  T
Q  101 tcaatttcctgactgcacc 119  Q
    ||| |||||||||||||||    
T  15672550 tcagtttcctgactgcacc 15672532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22687501 - 22687599
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||| |||||||    
T  22687501 tgcaagcattaatagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcatacattaagattaaaattaactttttcaaaaaa 22687599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 48928188 - 48928058
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||| |||||| | |||| |||||| ||||  |||||||    
T  48928188 tgcaaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaataaatcgaacatttagatcaaaattaatttttttaaaaaag 48928089  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||||||| || |||||||| |||||||||||    
T  48928088 tcaattttctaactgcaccgtagaagctccc 48928058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32820944 - 32820830
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||     
T  32820944 tgcaagcattactagatgaattactattaatcattcatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt-taaaaaaa 32820846  T
Q  101 tcaatttcctgactgc 116  Q
    | ||||| ||||||||    
T  32820845 ttaattttctgactgc 32820830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25691435 - 25691345
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| ||||    
T  25691435 tgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaaatttt 25691345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 5657372 - 5657241
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaa-atcataattaacttttccaaaaaa 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||| || | ||||||||||| ||||||     
T  5657372 tgcaagcattactagatgaattactattgatcattaatgagtaatcaaaaatttaaaaatgaataaatcattaaagattaaaattaactttttcaaaaat 5657273  T
Q  100 gtcaatttcctgactgcaccatagaagctccc 131  Q
    |||| |||| | ||||||   |||||||||||    
T  5657272 gtcagtttcataactgcattgtagaagctccc 5657241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43925365 - 43925455
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| || | |||||||||||    
T  43925365 tgcaagcattactagatgaattactattaatcatgaatcactaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttt 43925455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12166013 - 12166074
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12166013 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 12166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34362069 - 34361967
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaa--tcataattaacttttccaaaaa 98  Q
    ||||| ||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||   | | ||||||||||| ||||||    
T  34362069 tgcaaacattactagatgaattacttttgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaa 34361970  T
Q  99 agt 101  Q
    |||    
T  34361969 agt 34361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 21991914 - 21992028
Alignment:
Q  14 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgac 113  Q
    |||||||||||||||||||||    || ||||||||||||||||||||||||||||||||| || | ||||||| ||| ||||||||||| |||| |||     
T  21991914 agatgaattactattgatcat----cattaatcaacaatttaaaaatgaatcaaacattaagattaaaattaaccttttcaaaaaagtcagtttcatgat 21992009  T
Q  114 tgcaccatagaagctccct 132  Q
    | |||| ||||||||||||    
T  21992010 tacaccgtagaagctccct 21992028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 32593090 - 32592996
Alignment:
Q  8 attactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtca 103  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||| |||||||||  |||||||| |||| ||||||||||| |||||||||||    
T  32593090 attactagataaattactatggatcattaatcagcaatcaacaattt-aaaatgaattgaacattaagatcaaaattaactttttcaaaaaagtca 32592996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 44598938 - 44599069
Alignment:
Q  3 caagcattactagatgaattactattgatcattaatcagtaat---caacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||||||  |||||||||||||||||| ||||   ||||||||||||| |||||||| | |||| || | |||||| |||| |||||||    
T  44598938 caagcattactagatgaa--actattgatcattaatcaataataatcaacaatttaaaa-tgaatcaatcgttaagattaaaattaattttttcaaaaaa 44599034  T
Q  100 gtcaatttcctgactgcaccatagaagctccctta 134  Q
     ||| |||| |||||||||| ||||| ||||||||    
T  44599035 atcagtttcatgactgcaccgtagaaactccctta 44599069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33688153 - 33688117
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaa 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  33688153 tgcaagcattactagatgaattgctattgatcattaa 33688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 4902657 - 4902700
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaagc 127  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||    
T  4902657 taactttttcaaaaaagtcaattttctgacttcaccatagaagc 4902700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 33688118 - 33688051
Alignment:
Q  66 aaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||||||||| | |||||||||||  |||||||||| ||||  ||||||||  |||||||||||||    
T  33688118 aaacattaaaattaaaattaacttttttaaaaaagtcagtttcacgactgcactgtagaagctccctt 33688051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 12166215 - 12166289
Alignment:
Q  57 aaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||||||||||||| || | |||||||||||  | |||||||| |||| ||||||||   |||||||||||    
T  12166215 aaatgaatcaaacattaagattaaaattaacttttttagaaaagtcagtttcatgactgcagtgtagaagctccc 12166289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 8182 - 8315
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||  ||||||||    
T  8182 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaag 8281  T
Q  101 tcaatttcctgactgcaccatagaagctccctta 134  Q
    ||||||||||||||||||| ||||||||||||||    
T  8282 tcaatttcctgactgcaccgtagaagctccctta 8315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 20768377 - 20768507
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||| ||||||||||| |||||||     
T  20768377 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattgaacattaagatcaaaattaactttttcaaaaaaa 20768476  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    ||||||||||||||||||| |||||||||||    
T  20768477 tcaatttcctgactgcaccgtagaagctccc 20768507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 6091071 - 6090941
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||    
T  6091071 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaag 6090972  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    | | ||| ||||||||||| |||||||||||    
T  6090971 taagttttctgactgcaccgtagaagctccc 6090941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 3879828 - 3879696
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||     
T  3879828 tgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaa 3879729  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| ||||||||||||||| |||||| ||||||    
T  3879728 tcagtttcctgactgcaccgtagaaggtccctt 3879696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 1946131 - 1946260
Alignment:
Q  3 caagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaac-ttttccaaaaaag 100  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  1946131 caagcattattagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttcaaaaaag 1946230  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    ||| ||||||||||||||| ||||||||||    
T  1946231 tcagtttcctgactgcaccgtagaagctcc 1946260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 5627686 - 5627818
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||  ||||||    
T  5627686 tgcaagcattactaggtgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaatttttttaaaaaa 5627785  T
Q  100 gtcaatttcctgactgcaccatagaagctccct 132  Q
     ||| ||||||||||||||| ||||||||||||    
T  5627786 atcagtttcctgactgcaccgtagaagctccct 5627818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 7054662 - 7054533
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    ||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  7054662 tgcaaacattactaaatgaatatactattgatcattaatcattaatcaacaatttaaagatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 7054563  T
Q  100 gtcaatttcctgactgcaccatagaagctc 129  Q
    |||| |||| |||||||||| || ||||||    
T  7054562 gtcagtttcttgactgcaccgtaaaagctc 7054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 4318711 - 4318574
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta------aaatcataattaacttttcca 94  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||      |||| | ||||||||||| ||    
T  4318711 tgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaataaatcaaacattaaaattaaaattaaaattaactttttca 4318612  T
Q  95 aaaaagtcaatttcctgactgcaccatagaagctccct 132  Q
    ||||| ||| |||| | |||||||| ||||||||||||    
T  4318611 aaaaaatcagtttcataactgcaccgtagaagctccct 4318574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 33892901 - 33892776
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  | | ||||||||||| ||||||||    
T  33892901 tgcaaacattactaaatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaggttaaaattaactttttcaaaaaag 33892802  T
Q  101 tcaatttcctgactgcaccatagaag 126  Q
    ||| |||| | | |||||| ||||||    
T  33892801 tcagtttcataattgcaccgtagaag 33892776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 8513523 - 8513634
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  8513523 tgcaagcattactagatgaattactattgatcattaat-------caacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaag 8513615  T
Q  101 tcaatttcctgactgcacc 119  Q
    ||| |||| ||||||||||    
T  8513616 tcagtttcatgactgcacc 8513634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33619125 - 33619237
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaat---cagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||| |||||||| || | |||||||||||  ||||    
T  33619125 tgcaagcattactagatgaattactattgatcattaatgatcagcaatcaacaatttaaaaatgaatcgaacattaagattaaaattaactttttaaaaa 33619224  T
Q  98 aagtcaatttcct 110  Q
    |||||||||||||    
T  33619225 aagtcaatttcct 33619237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 7234924 - 7234791
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaa---tcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaa 97  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||   |||||||||||||||| |||| |||||||| |||| ||||||||||| |||||    
T  7234924 tgcaaacattactagatgaattactattgatcattaatcaacaacaatcaacaatttaaaaataaatcgaacattaagatcaaaattaactttttcaaaa 7234825  T
Q  98 aagtcaatttcctgactgcaccatagaagctccc 131  Q
    || ||| |||||||||| |||| || ||||||||    
T  7234824 aaatcattttcctgactacaccgtaaaagctccc 7234791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 21017007 - 21016917
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||| ||||| || | |||||||||||    
T  21017007 tgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttataaatgaatcaaatattaagattaaaattaactttt 21016917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29182459 - 29182573
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||| ||||||||||||||||||   ||||||||||||  ||||||||||||||||||||||||| |||||| |  | ||||||||||| ||||||||    
T  29182459 tgcaagtattactagatgaattact---gatcattaatcaacaatcaacaatttaaaaatgaatcaatcattaagactaaaattaactttttcaaaaaag 29182555  T
Q  101 tcaatttcctgactgcac 118  Q
    | | |||| || ||||||    
T  29182556 ttagtttcatgcctgcac 29182573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6089198 - 6089286
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaa 96  Q
    |||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||| | |||||| |||| ||||    
T  6089198 tgcaagcattactatatgaattactattgatcattaat-------caacaatttaaaaatgaatcaaacattaaaattaaaattaattttttcaaa 6089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 33724117 - 33724062
Alignment:
Q  32 cattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaac 87  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||| |||||||    
T  33724117 cattaatcattaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 33724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 6613704 - 6613655
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||||| ||||||||||| ||||||||||||||| || ||||||||||    
T  6613704 taactttttcaaaaaagtcagtttcctgactgcaccgtacaagctccctt 6613655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 21016773 - 21016726
Alignment:
Q  84 taacttttccaaaaaagtcaatttcctgactgcaccatagaagctccc 131  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||    
T  21016773 taactttttcaaaaaagacaattttctgactgcaccgtagaagctccc 21016726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 145906 - 145773
Alignment:
Q  1 tgcaagcattactagatgaat-tactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaa 99  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  145906 tgcaagcattactaaatgaatatacaattgatcattaatcagtaataaaaaatttaaaaatgaattaaacattaaaatcaaaattaactttttcaaaaaa 145807  T
Q  100 gtcaatttcctgactgcaccatagaagctccctt 133  Q
    |||||||||||||||||||| |||||||||||||    
T  145806 gtcaatttcctgactgcaccgtagaagctccctt 145773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 44251 - 44383
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||||||    
T  44251 tgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaactttttcaaaaaag 44350  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||  |||||||| | |||||||||||||    
T  44351 tcagtttgttgactgcatcgtagaagctccctt 44383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 154536 - 154404
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||||||    
T  154536 tgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaactttttcaaaaaag 154437  T
Q  101 tcaatttcctgactgcaccatagaagctccctt 133  Q
    ||| |||  |||||||| | |||||||||||||    
T  154436 tcagtttgttgactgcatcgtagaagctccctt 154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12204 - 12332
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||||||||  |||||||    
T  12204 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat-aatcaaacattaagattaaaattaacttttttaaaaaag 12302  T
Q  101 tcaatttcctgactgcaccatagaagctcc 130  Q
    | | |||| |||||||||| ||||||||||    
T  12303 taagtttcatgactgcaccgtagaagctcc 12332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 84; Significance: 6e-40; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 408319 - 408191
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| |  |||||    
T  408319 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaattttttc--aaaag 408222  T
Q  101 tcaatttcctgactgcaccatagaagctccc 131  Q
    | |||||  |||||||||| ||||| |||||    
T  408221 ttaattttttgactgcaccgtagaatctccc 408191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 93990 - 93873
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaag 100  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||| |    
T  93990 tgcaagcattactagatgaattgctattgatcattaatcactaatcaacaattt-aaaatgaatcaaacattaaaatcaaaattaacttttttaaaaagg 93892  T
Q  101 tcaatttcctgactgcacc 119  Q
    ||  |||||| ||||||||    
T  93891 tccgtttccttactgcacc 93873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 423 - 513
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaactttt 91  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  423 tgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttt 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 692 - 747
Alignment:
Q  81 aattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctcccttatt 136  Q
    ||||||||||| ||||||| |||||||| |||||||||| ||||||||||| ||||    
T  692 aattaactttttcaaaaaaatcaatttcttgactgcaccgtagaagctcccatatt 747  T

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Target: scaffold0008 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 267606 - 267701
Alignment:
Q  36 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctccc 131  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||| ||||||||||| |||| |||||||||||||||| |||||    
T  267606 aatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaattttttcaaaaaagtcagtttcttgactgcaccatagaatctccc 267701  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 101010 - 101058
Alignment:
Q  1 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaa 51  Q
    |||||||||||||| ||| |||||||  |||||||||||||||||||||||    
T  101010 tgcaagcattactaaatgcattacta--gatcattaatcagtaatcaacaa 101058  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 11415 - 11378
Alignment:
Q  88 ttttccaaaaaagtcaatttcctgactgcaccatagaa 125  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  11415 ttttccaaaaaagtcaatttactgactgcaccgtagaa 11378  T

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