View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12868_low_30 (Length: 230)
Name: NF12868_low_30
Description: NF12868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12868_low_30 |
 | |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] chr5 (14 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 16843332 - 16843561
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843332 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
16843431 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16843432 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
16843531 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtctttgtctc |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
16843532 |
tggaaggaccattaccacagtctttgtctc |
16843561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 226
Target Start/End: Original strand, 24218077 - 24218292
Alignment:
| Q |
11 |
tgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgtattgg |
110 |
Q |
| |
|
|||||||||||| |||| |||||||| ||||||||| |||||||||| ||||| | ||||||||||||||| |||||||| ||| |||| |||||||| |
|
|
| T |
24218077 |
tgcaatgcaagttccctgaatttgctcaatttggctaacaacaatttaacaggaacgattccacaatgcctgggaacatttccttatctttctgtattgg |
24218176 |
T |
|
| Q |
111 |
atatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaaggacc |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
24218177 |
atatgcaaatgaacaacctctatggaagcatgcctaaaacattttcggaaggaaatgcattcgagactataaagttgaatggcaaccaattggagggacc |
24218276 |
T |
|
| Q |
211 |
attaccacagtctttg |
226 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
24218277 |
attaccacagtctttg |
24218292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 16846000 - 16846224
Alignment:
| Q |
5 |
acattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgat----tccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||| ||||||| ||| | | | || |||||||||||||||||||| | | ||||||| |||||||||| | |||||||||||||||||| |
|
|
| T |
16846000 |
acattctgcagtgcaagtttcctgattgttctcaatttggctcacaacaatttaatatgtatgatatattccacaatgcttgggaacattaacttctctt |
16846099 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
16846100 |
aatgtattggatatgcaaatgaacaacctctttggaagcattcctagaaccttttccaaaggaaatgtgtttgtcactataaagttgaatggcaaccaat |
16846199 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtcttt |
225 |
Q |
| |
|
|||||||||||||||||| |||||| |
|
|
| T |
16846200 |
tggaaggaccattaccacggtcttt |
16846224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16843197 - 16843253
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaattt |
57 |
Q |
| |
|
|||||||||||||||||||||| | | ||| | || |||||||||||||||||||| |
|
|
| T |
16843197 |
ttcaacattctgcaatgcaagtttcttgaatgttctcaatttggctcacaacaattt |
16843253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 37532924 - 37532695
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||||||| ||| ||| | || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37532924 |
ttcaacattctgcaatgcaagttacctgaatgttctcaatttggctcacaacaatttgacaggtatgattccacaatgcctgggaacattaacttctctt |
37532825 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37532824 |
aatgtattggatatgcaaatgaacaacctctatggaaacattcctagaaccttttccaaagaaaatgcatttcagactataaagttgaatggaaaccaat |
37532725 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtctttgtctc |
230 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |
|
|
| T |
37532724 |
tggaaggaccattaccccagtctttgtctc |
37532695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 37594028 - 37593799
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||||||| ||| ||| | || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37594028 |
ttcaacattctgcaatgcaagttacctgaatgttctcaatttggctcacaacaatttaacaggtatgattccacaatgcctgggaacattaacttctctt |
37593929 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37593928 |
aatgtattggatatgcaaatgaacaacctctatggaaacattcctagaaccttttccaaagaaaatgcatttcagactataaagttgaatggaaaccaat |
37593829 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtctttgtctc |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
37593828 |
tggaaggaccattaccacagtctttgtctc |
37593799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 37696419 - 37696190
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||||||| ||| ||| | || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37696419 |
ttcaacattctgcaatgcaagttacctgaatgttctcaatttggctcacaacaatttaacaggtatgattccacaatgcctgggaacattaacttctctt |
37696320 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37696319 |
aatgtattggatatgcaaatgaacaacctctatggaaacattcctagaaccttttccaaagaaaatgcatttcagactataaagttgaatggaaaccaat |
37696220 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtctttgtctc |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
37696219 |
tggaaggaccattaccacagtctttgtctc |
37696190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 37401334 - 37401559
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||| ||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37401334 |
ttcaacattctgcaatgccagttccctttatgtgctcgatttggctcacaacaatttgacaggtatgattccacaatgcctgggaacattaacttctctt |
37401433 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
37401434 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctagaacctttaccaaaggaaatgcatttgagactataaagttgaatggcaaccaat |
37401533 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtctttg |
226 |
Q |
| |
|
||||||||||||||||||| |||||| |
|
|
| T |
37401534 |
tggaaggaccattaccacaatctttg |
37401559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37639570 - 37639345
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||| ||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37639570 |
ttcaacattctgcaatgccagttccctttatatgctcgatttggctcacaacaatttgacaggtatgattccacaatgcctgggaacattaacttctctt |
37639471 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
37639470 |
actgtattggatatgcaaatgaacaacctctatggaagcattcctagaaccttctccaaaggaaatgcatttgagactataaagttgaatggcaaccaat |
37639371 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtctttg |
226 |
Q |
| |
|
||||||||||||||||||| |||||| |
|
|
| T |
37639370 |
tggaaggaccattaccacaatctttg |
37639345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37823728 - 37823503
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||| ||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
37823728 |
ttcaacattctgcaatgccagttccctttatatgctcgatttggctcacaacaatttgacaggtatgattccacaatgcctgggaacattaaattctctt |
37823629 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
37823628 |
catgtattggatatgcaaatgaacaacctctatggaagcattcctagaacctttaccaaaggaaatgcatttgagactataaagttgaatggcaaccaat |
37823529 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtctttg |
226 |
Q |
| |
|
||||||||||||||||||| |||||| |
|
|
| T |
37823528 |
tggaaggaccattaccacaatctttg |
37823503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37711328 - 37711103
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||| ||| ||||| || |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |
|
|
| T |
37711328 |
ttcaacattctgcaatgccagttccctttatgtgctcgatttggctcacaacaatttgaaaggtatgattccacaatgcctaggaacatttcctaatctc |
37711229 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
37711228 |
tatgttttggatatgcaaatgaacaacctctatggaagcattcctagaacctttaccaaaggaaatgcatttgagactataaagttgaatggcaaccaat |
37711129 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtctttg |
226 |
Q |
| |
|
|||||||| |||||||||| |||||| |
|
|
| T |
37711128 |
tggaaggatcattaccacaatctttg |
37711103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37702507 - 37702282
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||| | | || ||||||||||||||||||||||||||||||||||||||||| || |||||||| || ||| |
|
|
| T |
37702507 |
ttcaacattctgcaatgcaagttccctttacattctcaatttggctcacaacaatttgacaggtatgattccacaatgtctgggaacatttcctcatctc |
37702408 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
| | |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
37702407 |
tctattttggatatgcaaatgaacaacctctatggaagcattcctagaaccttctccaaaggaaatgcatttgagactataaagttgaatggcaaccaat |
37702308 |
T |
|
| Q |
201 |
tggaaggaccattaccacagtctttg |
226 |
Q |
| |
|
|||||||||||||||| ||||||||| |
|
|
| T |
37702307 |
tggaaggaccattaccgcagtctttg |
37702282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 37393213 - 37393431
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctctt |
100 |
Q |
| |
|
|||||||||||||||||| ||| ||||| || | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |
|
|
| T |
37393213 |
ttcaacattctgcaatgctagttccctttatatcctcaatttggctcacaacaatttgacaggtatgattccacaatgtctaggaacattttcttatctc |
37393312 |
T |
|
| Q |
101 |
aatgtattggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaat |
200 |
Q |
| |
|
| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||| |||||||||||||||| |
|
|
| T |
37393313 |
tctattttggatatgcaaatgaacaacctctgtggaagcattcctggaaccttttccaaaggaaatatatttgagactataaaattgaatggaaaccaat |
37393412 |
T |
|
| Q |
201 |
tggaaggaccattaccaca |
219 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
37393413 |
tggaaggaccattaccaca |
37393431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 37382667 - 37382887
Alignment:
| Q |
6 |
cattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgt |
105 |
Q |
| |
|
|||| ||||| |||||| |||| ||| |||| |||||||||||||||||||| || || ||||||||||||||| | |||||||| |||||||| || |
|
|
| T |
37382667 |
cattgtgcaacgcaagttccctgaatgtgctcaatttggctcacaacaatttaactggcatgattccacaatgcttgggaacatttccttctctttcggt |
37382766 |
T |
|
| Q |
106 |
attggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaa |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||||| |
|
|
| T |
37382767 |
attggatatgcaaatgaacaacctctatggacacattcctagaaccttctccaaaggaaatgcatttgagacaataaagttgaatggaaaccgattggaa |
37382866 |
T |
|
| Q |
206 |
ggaccattaccacagtctttg |
226 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
37382867 |
ggaccattaccacagtctttg |
37382887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 37413547 - 37413726
Alignment:
| Q |
47 |
cacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgtattggatatgcaaatgaacaacctctatggaagcattccta |
146 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| | ||||||||| |||||| |
|
|
| T |
37413547 |
cacaacaatttaacaggcatgattccacaatgcctaggaacatttccttctctttctatattggatatgcaaatgaacaacttgtatggaagctttccta |
37413646 |
T |
|
| Q |
147 |
aaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaaggaccattaccacagtctttg |
226 |
Q |
| |
|
||||||||||||||||||| ||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37413647 |
gaaccttttccaaaggaaatacatttgagatgataaagttgaacggaaatcaattggaaggaccattaccacagtctttg |
37413726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 226
Target Start/End: Complemental strand, 37435502 - 37435309
Alignment:
| Q |
33 |
tgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgtattggatatgcaaatgaacaacctcta |
132 |
Q |
| |
|
|||| |||||||| |||||||| |||||||| || |||||| ||||||| |||||||| ||| |||| || ||||||||||||||||||||||| | |
|
|
| T |
37435502 |
tgctcaatttggcccacaacaaattgacaggcataattccaaaatgcctgggaacatttccttttctttccgttttggatatgcaaatgaacaaccttaa |
37435403 |
T |
|
| Q |
133 |
tggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaaggaccattaccacagtctttg |
226 |
Q |
| |
|
||||||||| |||||||| ||||||| ||||||||| || ||||||||||||||||||| |||||||| |||||||||||||| || |||||| |
|
|
| T |
37435402 |
tggaagcatgcctaaaactttttccagaggaaatgccttcgagactataaagttgaatggcaaccaattagaaggaccattacctcaatctttg |
37435309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37696554 - 37696498
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaattt |
57 |
Q |
| |
|
|||||||||||||||||||||| ||||| || || |||||||||||||||||||| |
|
|
| T |
37696554 |
ttcaacattctgcaatgcaagttccctttataccctcaatttggctcacaacaattt |
37696498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37594163 - 37594110
Alignment:
| Q |
1 |
ttcaacattctgcaatgcaagtacccttaatttgcttaatttggctcacaacaa |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||| || || ||||||||||||||||| |
|
|
| T |
37594163 |
ttcaacattctgcaatgcaagttccctttataccctcaatttggctcacaacaa |
37594110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 8 - 222
Target Start/End: Complemental strand, 14553189 - 14552975
Alignment:
| Q |
8 |
ttctgcaatgcaagtacccttaatttgcttaatttggctcacaacaatttgacaggtatgattccacaatgcctaggaacattaacttctcttaatgtat |
107 |
Q |
| |
|
||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| | | | |
|
|
| T |
14553189 |
ttctgcaatgcaagttccctttatatgctcaatttggctcacaacaatttgacaggtatgattccacaatgcctggggacatttcctcttctctctattt |
14553090 |
T |
|
| Q |
108 |
tggatatgcaaatgaacaacctctatggaagcattcctaaaaccttttccaaaggaaatgcatttcagactataaagttgaatggaaaccaattggaagg |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
14553089 |
tggatatgcaaatgaacaacctctatggaatcattcctagaaccttttcaaaaggaaatgcatttgagactataaagttgaatggaaaccaattgaaagg |
14552990 |
T |
|
| Q |
208 |
accattaccacagtc |
222 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
14552989 |
accactaccacagtc |
14552975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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