View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12868_low_4 (Length: 441)

Name: NF12868_low_4
Description: NF12868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12868_low_4
NF12868_low_4
[»] chr2 (48 HSPs)
chr2 (27-297)||(14291493-14291763)
chr2 (27-297)||(9296224-9296493)
chr2 (24-297)||(11098746-11099019)
chr2 (31-297)||(3491755-3492018)
chr2 (85-297)||(25398500-25398711)
chr2 (85-297)||(25403638-25403849)
chr2 (85-271)||(25407653-25407838)
chr2 (31-297)||(40738848-40739098)
chr2 (31-297)||(28259010-28259270)
chr2 (121-297)||(39811894-39812068)
chr2 (31-296)||(23078304-23078562)
chr2 (159-297)||(44312567-44312704)
chr2 (122-297)||(32246793-32246966)
chr2 (31-297)||(36757595-36757855)
chr2 (123-297)||(8040064-8040240)
chr2 (123-297)||(10707172-10707345)
chr2 (123-297)||(8390069-8390243)
chr2 (123-297)||(13569332-13569506)
chr2 (123-280)||(42039588-42039744)
chr2 (31-297)||(34388862-34389115)
chr2 (157-297)||(10445397-10445537)
chr2 (205-297)||(19344426-19344518)
chr2 (205-297)||(19349284-19349376)
chr2 (157-297)||(14698961-14699100)
chr2 (204-297)||(20522224-20522319)
chr2 (204-297)||(21629948-21630042)
chr2 (157-297)||(34682287-34682427)
chr2 (157-297)||(39482935-39483075)
chr2 (174-297)||(17865207-17865330)
chr2 (204-297)||(33528619-33528714)
chr2 (214-280)||(27149303-27149369)
chr2 (157-280)||(33118158-33118280)
chr2 (157-279)||(31056067-31056188)
chr2 (204-297)||(2869691-2869786)
chr2 (31-74)||(25409854-25409897)
chr2 (21-68)||(39811847-39811894)
chr2 (217-297)||(16940221-16940302)
chr2 (217-297)||(17010886-17010967)
chr2 (23-67)||(32246968-32247012)
chr2 (204-297)||(2838028-2838123)
chr2 (217-297)||(1345552-1345634)
chr2 (369-409)||(9296568-9296609)
chr2 (373-409)||(14291377-14291414)
chr2 (369-406)||(32246676-32246713)
chr2 (31-74)||(17865428-17865469)
chr2 (31-74)||(21630168-21630209)
chr2 (238-297)||(35215586-35215646)
chr2 (238-297)||(35217963-35218023)
[»] chr8 (43 HSPs)
chr8 (24-297)||(4759893-4760167)
chr8 (21-297)||(30655651-30655927)
chr8 (24-297)||(33037627-33037898)
chr8 (24-297)||(10688959-10689235)
chr8 (24-297)||(36979382-36979654)
chr8 (21-297)||(18870377-18870654)
chr8 (21-297)||(18852983-18853260)
chr8 (21-297)||(6311302-6311579)
chr8 (24-297)||(1261776-1262046)
chr8 (31-297)||(31071058-31071322)
chr8 (31-297)||(26287906-26288158)
chr8 (31-297)||(26301163-26301415)
chr8 (31-297)||(26313157-26313409)
chr8 (121-297)||(7289831-7290006)
chr8 (121-297)||(25328184-25328358)
chr8 (31-297)||(7412345-7412604)
chr8 (31-297)||(19175587-19175847)
chr8 (31-280)||(4456050-4456292)
chr8 (206-297)||(39784813-39784902)
chr8 (123-297)||(23799496-23799670)
chr8 (157-297)||(19752347-19752487)
chr8 (205-297)||(10684252-10684344)
chr8 (205-297)||(35745396-35745488)
chr8 (129-297)||(26403155-26403323)
chr8 (157-297)||(6127225-6127365)
chr8 (204-297)||(5702481-5702576)
chr8 (218-297)||(4696609-4696689)
chr8 (21-68)||(7289784-7289831)
chr8 (23-68)||(25328013-25328058)
chr8 (23-68)||(25328139-25328184)
chr8 (238-297)||(9765852-9765912)
chr8 (204-262)||(6813723-6813782)
chr8 (204-280)||(9054835-9054912)
chr8 (369-409)||(6311186-6311226)
chr8 (23-67)||(39784684-39784728)
chr8 (204-260)||(3051162-3051219)
chr8 (369-425)||(4760243-4760299)
chr8 (369-406)||(7290083-7290120)
chr8 (238-271)||(18813156-18813189)
chr8 (31-74)||(4696441-4696482)
chr8 (31-74)||(9054253-9054294)
chr8 (238-297)||(43079877-43079937)
chr8 (238-297)||(43082248-43082308)
[»] chr7 (54 HSPs)
chr7 (21-297)||(20357363-20357639)
chr7 (24-297)||(2057970-2058246)
chr7 (24-297)||(1533263-1533536)
chr7 (31-297)||(21639813-21640076)
chr7 (31-297)||(21646011-21646274)
chr7 (31-297)||(18408768-18409030)
chr7 (31-297)||(18413645-18413906)
chr7 (120-297)||(12406336-12406512)
chr7 (121-297)||(12396916-12397091)
chr7 (121-297)||(24024232-24024406)
chr7 (47-297)||(21983288-21983536)
chr7 (121-297)||(31109489-31109663)
chr7 (31-297)||(2479341-2479600)
chr7 (86-297)||(44848568-44848777)
chr7 (47-297)||(29159807-29160055)
chr7 (206-297)||(19992318-19992408)
chr7 (157-297)||(9189961-9190101)
chr7 (157-297)||(2580394-2580533)
chr7 (211-297)||(4866735-4866820)
chr7 (205-297)||(16880078-16880169)
chr7 (205-297)||(16884934-16885025)
chr7 (205-297)||(24261311-24261403)
chr7 (205-297)||(24266190-24266282)
chr7 (159-297)||(20284093-20284230)
chr7 (31-297)||(47263682-47263930)
chr7 (157-297)||(2647649-2647789)
chr7 (157-297)||(46516263-46516403)
chr7 (157-297)||(49091665-49091805)
chr7 (157-294)||(55955-56091)
chr7 (233-297)||(21812254-21812318)
chr7 (31-297)||(21988912-21989172)
chr7 (21-68)||(12397091-12397138)
chr7 (21-68)||(31109442-31109489)
chr7 (204-297)||(33332448-33332543)
chr7 (21-66)||(4873310-4873355)
chr7 (21-66)||(12406513-12406558)
chr7 (204-297)||(28617223-28617318)
chr7 (217-279)||(35960839-35960901)
chr7 (218-297)||(9185178-9185258)
chr7 (21-68)||(24024185-24024232)
chr7 (174-297)||(4796637-4796760)
chr7 (157-278)||(23402967-23403086)
chr7 (204-262)||(5817268-5817327)
chr7 (369-406)||(4866621-4866658)
chr7 (369-406)||(12396803-12396840)
chr7 (369-406)||(12406223-12406260)
chr7 (238-297)||(7351652-7351712)
chr7 (23-67)||(21812098-21812143)
chr7 (31-74)||(2580613-2580654)
chr7 (31-74)||(4796501-4796542)
chr7 (31-74)||(9185007-9185048)
chr7 (31-74)||(20284312-20284353)
chr7 (31-74)||(23402846-23402887)
chr7 (238-297)||(31155911-31155971)
[»] chr4 (61 HSPs)
chr4 (24-297)||(24741945-24742218)
chr4 (24-297)||(29760646-29760919)
chr4 (31-297)||(28468367-28468621)
chr4 (31-297)||(31985466-31985726)
chr4 (121-297)||(9224312-9224487)
chr4 (121-297)||(51520462-51520637)
chr4 (121-297)||(9229099-9229274)
chr4 (122-297)||(45347723-45347897)
chr4 (122-297)||(45357203-45357376)
chr4 (121-297)||(3814029-3814202)
chr4 (31-297)||(5396504-5396764)
chr4 (125-297)||(5732670-5732839)
chr4 (31-297)||(16623126-16623386)
chr4 (138-296)||(36315163-36315321)
chr4 (138-296)||(36329372-36329530)
chr4 (169-289)||(56146664-56146783)
chr4 (122-297)||(5147681-5147856)
chr4 (206-297)||(18855732-18855821)
chr4 (123-297)||(3777553-3777726)
chr4 (157-297)||(3796472-3796612)
chr4 (157-297)||(10047383-10047523)
chr4 (122-297)||(5143263-5143438)
chr4 (204-297)||(39245998-39246093)
chr4 (160-297)||(38152395-38152532)
chr4 (218-297)||(5269204-5269284)
chr4 (217-280)||(24333831-24333894)
chr4 (21-68)||(51520637-51520684)
chr4 (174-297)||(16630650-16630773)
chr4 (217-296)||(6743427-6743507)
chr4 (218-297)||(25862035-25862115)
chr4 (21-68)||(18712624-18712671)
chr4 (204-280)||(1983298-1983375)
chr4 (31-297)||(8689329-8689576)
chr4 (157-297)||(42599526-42599667)
chr4 (23-67)||(45347677-45347721)
chr4 (21-68)||(9224265-9224312)
chr4 (21-68)||(9229052-9229099)
chr4 (31-147)||(16628705-16628815)
chr4 (23-68)||(3814202-3814247)
chr4 (204-264)||(5112275-5112336)
chr4 (369-406)||(9224563-9224600)
chr4 (369-406)||(9229350-9229387)
chr4 (23-67)||(5732844-5732888)
chr4 (205-264)||(34495822-34495882)
chr4 (369-406)||(3813915-3813952)
chr4 (204-280)||(39774303-39774380)
chr4 (369-406)||(51520348-51520385)
chr4 (369-406)||(56146868-56146905)
chr4 (23-67)||(18855906-18855950)
chr4 (23-67)||(45357157-45357201)
chr4 (362-404)||(45347967-45348009)
chr4 (362-404)||(45357446-45357488)
chr4 (217-297)||(54867188-54867268)
chr4 (31-74)||(3777772-3777813)
chr4 (31-74)||(5112460-5112501)
chr4 (31-74)||(10047604-10047645)
chr4 (238-297)||(16931789-16931849)
chr4 (238-297)||(16934143-16934203)
chr4 (238-297)||(22780373-22780433)
chr4 (369-409)||(29760532-29760571)
chr4 (238-297)||(44599838-44599898)
[»] chr3 (63 HSPs)
chr3 (24-297)||(2671405-2671678)
chr3 (24-297)||(8738882-8739155)
chr3 (24-297)||(9091120-9091393)
chr3 (24-297)||(40372615-40372887)
chr3 (21-297)||(7167249-7167526)
chr3 (24-297)||(8477367-8477642)
chr3 (21-297)||(28503680-28503956)
chr3 (21-258)||(28501513-28501750)
chr3 (31-297)||(26928421-26928683)
chr3 (31-297)||(1305953-1306216)
chr3 (31-297)||(32143325-32143587)
chr3 (31-297)||(27452962-27453224)
chr3 (121-297)||(22173100-22173275)
chr3 (31-297)||(27974774-27975035)
chr3 (31-297)||(16264354-16264613)
chr3 (123-280)||(6794623-6794778)
chr3 (31-297)||(27986278-27986529)
chr3 (31-297)||(8370311-8370569)
chr3 (125-297)||(18656440-18656609)
chr3 (31-297)||(33386497-33386749)
chr3 (31-297)||(36029097-36029357)
chr3 (31-297)||(21711227-21711486)
chr3 (31-297)||(40592604-40592865)
chr3 (157-297)||(18552826-18552966)
chr3 (205-297)||(2672919-2673011)
chr3 (205-297)||(2677075-2677167)
chr3 (205-297)||(8512222-8512314)
chr3 (205-297)||(8517102-8517194)
chr3 (205-297)||(32475490-32475580)
chr3 (205-297)||(32480348-32480438)
chr3 (157-297)||(1736248-1736388)
chr3 (157-280)||(48438236-48438358)
chr3 (157-297)||(30709733-30709873)
chr3 (123-297)||(3715911-3716085)
chr3 (35-253)||(35925529-35925738)
chr3 (157-297)||(25795785-25795925)
chr3 (205-297)||(24968112-24968204)
chr3 (21-68)||(22173053-22173100)
chr3 (157-297)||(3328300-3328439)
chr3 (204-297)||(37466295-37466389)
chr3 (157-280)||(40844674-40844795)
chr3 (204-297)||(26298992-26299087)
chr3 (204-297)||(1417479-1417573)
chr3 (204-264)||(4386915-4386976)
chr3 (204-280)||(3323679-3323755)
chr3 (218-297)||(39039995-39040075)
chr3 (204-297)||(47923894-47923989)
chr3 (369-406)||(22173351-22173388)
chr3 (253-297)||(10207939-10207983)
chr3 (23-67)||(18656614-18656658)
chr3 (238-297)||(38210569-38210629)
chr3 (369-409)||(7167134-7167173)
chr3 (204-297)||(24695152-24695247)
chr3 (33-74)||(10274605-10274646)
chr3 (204-260)||(21353604-21353661)
chr3 (31-74)||(3323513-3323554)
chr3 (31-74)||(3328179-3328220)
chr3 (31-74)||(4386799-4386840)
chr3 (31-74)||(26299211-26299252)
chr3 (369-409)||(28504023-28504062)
chr3 (31-74)||(47923726-47923767)
chr3 (238-297)||(50494198-50494258)
chr3 (234-297)||(53894055-53894119)
[»] chr6 (40 HSPs)
chr6 (24-297)||(5674589-5674862)
chr6 (121-297)||(11856979-11857154)
chr6 (121-297)||(22010602-22010777)
chr6 (31-279)||(22709041-22709274)
chr6 (31-297)||(5757311-5757571)
chr6 (121-297)||(14737482-14737656)
chr6 (121-297)||(14742342-14742516)
chr6 (121-297)||(28184510-28184684)
chr6 (31-297)||(21356040-21356301)
chr6 (122-297)||(28155477-28155649)
chr6 (206-297)||(6438506-6438595)
chr6 (205-297)||(6005422-6005514)
chr6 (205-297)||(33330433-33330525)
chr6 (122-297)||(16838749-16838923)
chr6 (157-297)||(31086426-31086566)
chr6 (205-297)||(33335930-33336022)
chr6 (31-297)||(5572076-5572334)
chr6 (157-297)||(10077118-10077258)
chr6 (21-68)||(11857154-11857201)
chr6 (21-68)||(14737435-14737482)
chr6 (21-68)||(22010555-22010602)
chr6 (47-280)||(18232867-18233096)
chr6 (217-297)||(4629958-4630039)
chr6 (47-297)||(31979517-31979762)
chr6 (21-68)||(14742295-14742342)
chr6 (204-289)||(21801342-21801429)
chr6 (204-262)||(22963739-22963798)
chr6 (204-262)||(23824595-23824654)
chr6 (369-406)||(11856863-11856900)
chr6 (369-406)||(14737733-14737770)
chr6 (369-406)||(28184396-28184433)
chr6 (218-297)||(5017482-5017562)
chr6 (23-67)||(28155431-28155475)
chr6 (218-297)||(31936591-31936671)
chr6 (369-406)||(14742592-14742629)
chr6 (23-67)||(6438680-6438724)
chr6 (256-297)||(5343486-5343527)
chr6 (238-297)||(12195515-12195575)
chr6 (21-68)||(28184684-28184734)
chr6 (234-266)||(28955140-28955172)
[»] chr5 (67 HSPs)
chr5 (21-297)||(31180219-31180494)
chr5 (21-297)||(30631411-30631687)
chr5 (27-297)||(24135853-24136121)
chr5 (31-297)||(38219403-38219666)
chr5 (24-297)||(35387667-35387937)
chr5 (105-297)||(38192178-38192369)
chr5 (31-297)||(15464536-15464798)
chr5 (121-297)||(1457067-1457242)
chr5 (31-297)||(36932181-36932443)
chr5 (121-297)||(43592284-43592459)
chr5 (121-297)||(27449819-27449994)
chr5 (31-297)||(9353165-9353425)
chr5 (121-297)||(15044691-15044865)
chr5 (121-297)||(27444975-27445150)
chr5 (121-289)||(43598737-43598904)
chr5 (121-289)||(43604229-43604396)
chr5 (121-289)||(43609721-43609888)
chr5 (31-297)||(14520234-14520494)
chr5 (31-297)||(11916805-11917065)
chr5 (126-297)||(28807485-28807652)
chr5 (123-297)||(12084096-12084268)
chr5 (123-297)||(10281755-10281929)
chr5 (207-297)||(37556613-37556702)
chr5 (207-297)||(37561435-37561524)
chr5 (205-297)||(31401838-31401930)
chr5 (205-297)||(2785380-2785472)
chr5 (205-297)||(31396981-31397073)
chr5 (124-280)||(3880321-3880476)
chr5 (205-297)||(33768184-33768276)
chr5 (205-297)||(33791321-33791413)
chr5 (31-297)||(17003792-17004053)
chr5 (204-297)||(28832263-28832357)
chr5 (157-297)||(42127364-42127503)
chr5 (157-297)||(31300549-31300689)
chr5 (21-68)||(1457020-1457067)
chr5 (21-68)||(27445150-27445197)
chr5 (21-68)||(27449994-27450041)
chr5 (21-68)||(43592459-43592506)
chr5 (21-68)||(43598904-43598951)
chr5 (21-68)||(43604396-43604443)
chr5 (21-68)||(43609888-43609935)
chr5 (159-297)||(19588750-19588888)
chr5 (21-68)||(15044865-15044913)
chr5 (369-406)||(24135743-24135780)
chr5 (23-67)||(28807435-28807479)
chr5 (204-297)||(24553506-24553599)
chr5 (369-406)||(1457318-1457355)
chr5 (214-279)||(7160912-7160977)
chr5 (369-406)||(43592170-43592207)
chr5 (369-406)||(43598615-43598652)
chr5 (369-406)||(43604107-43604144)
chr5 (369-406)||(43609599-43609636)
chr5 (238-297)||(4410241-4410301)
chr5 (208-261)||(2630272-2630326)
chr5 (204-264)||(6741890-6741951)
chr5 (369-398)||(15044586-15044615)
chr5 (369-406)||(27444861-27444898)
chr5 (369-406)||(27449705-27449742)
chr5 (369-398)||(30631306-30631335)
chr5 (204-264)||(33030938-33030999)
chr5 (204-263)||(11181830-11181890)
chr5 (238-297)||(15552464-15552524)
chr5 (31-74)||(24553360-24553401)
chr5 (31-74)||(28832480-28832521)
chr5 (238-297)||(31179371-31179431)
chr5 (238-297)||(31542953-31543013)
chr5 (238-297)||(31545299-31545359)
[»] chr1 (43 HSPs)
chr1 (21-297)||(24787180-24787456)
chr1 (24-297)||(24202591-24202861)
chr1 (35-297)||(19358677-19358935)
chr1 (31-297)||(19361262-19361524)
chr1 (46-297)||(19379916-19380164)
chr1 (31-279)||(13604455-13604697)
chr1 (31-294)||(3281715-3281971)
chr1 (31-193)||(19366137-19366297)
chr1 (35-297)||(26644735-26644990)
chr1 (121-297)||(41390586-41390760)
chr1 (121-297)||(41398241-41398415)
chr1 (122-297)||(25444996-25445169)
chr1 (123-297)||(47703855-47704029)
chr1 (31-297)||(37069774-37070031)
chr1 (46-271)||(21536416-21536635)
chr1 (206-297)||(39445505-39445594)
chr1 (206-297)||(44023864-44023953)
chr1 (206-297)||(1055002-1055091)
chr1 (157-280)||(32889461-32889583)
chr1 (205-297)||(43988452-43988544)
chr1 (169-297)||(9476265-9476393)
chr1 (157-297)||(16124469-16124609)
chr1 (204-297)||(19072932-19073027)
chr1 (204-297)||(19120822-19120917)
chr1 (157-297)||(47098778-47098917)
chr1 (157-294)||(29651818-29651955)
chr1 (204-297)||(27104370-27104465)
chr1 (174-297)||(13598402-13598525)
chr1 (21-68)||(41390760-41390807)
chr1 (21-68)||(41398415-41398462)
chr1 (217-297)||(775676-775757)
chr1 (204-297)||(47102840-47102934)
chr1 (369-406)||(24202933-24202970)
chr1 (23-67)||(1054873-1054917)
chr1 (23-67)||(25439757-25439801)
chr1 (23-67)||(25444950-25444994)
chr1 (23-67)||(39445679-39445723)
chr1 (23-67)||(44023735-44023779)
chr1 (204-248)||(48382479-48382524)
chr1 (238-297)||(9459419-9459479)
chr1 (238-297)||(9463246-9463306)
chr1 (238-297)||(16226386-16226446)
chr1 (31-74)||(47102672-47102713)
[»] scaffold0188 (2 HSPs)
scaffold0188 (31-297)||(17781-18044)
scaffold0188 (31-297)||(23874-24137)
[»] scaffold0140 (1 HSPs)
scaffold0140 (31-297)||(8250-8512)
[»] scaffold0006 (3 HSPs)
scaffold0006 (31-279)||(133112-133354)
scaffold0006 (174-297)||(5687-5810)
scaffold0006 (217-297)||(2496-2577)
[»] scaffold0135 (3 HSPs)
scaffold0135 (121-297)||(34967-35142)
scaffold0135 (21-68)||(34920-34967)
scaffold0135 (369-406)||(35218-35255)
[»] scaffold0355 (4 HSPs)
scaffold0355 (121-297)||(9549-9722)
scaffold0355 (21-68)||(3707-3754)
scaffold0355 (121-200)||(3754-3833)
scaffold0355 (33-68)||(9514-9549)
[»] scaffold0087 (2 HSPs)
scaffold0087 (31-297)||(36665-36925)
scaffold0087 (35-297)||(43798-44054)
[»] scaffold0036 (1 HSPs)
scaffold0036 (31-297)||(85687-85947)
[»] scaffold0464 (2 HSPs)
scaffold0464 (206-297)||(368-457)
scaffold0464 (23-67)||(542-586)
[»] scaffold0197 (2 HSPs)
scaffold0197 (205-297)||(14297-14389)
scaffold0197 (205-297)||(19153-19245)
[»] scaffold0259 (1 HSPs)
scaffold0259 (205-297)||(2239-2331)
[»] scaffold0028 (1 HSPs)
scaffold0028 (205-297)||(148944-149036)
[»] scaffold0148 (1 HSPs)
scaffold0148 (169-294)||(10736-10861)
[»] scaffold0009 (1 HSPs)
scaffold0009 (233-297)||(181980-182044)
[»] scaffold0176 (1 HSPs)
scaffold0176 (160-297)||(17267-17404)
[»] scaffold0098 (1 HSPs)
scaffold0098 (218-279)||(45276-45337)
[»] scaffold0267 (1 HSPs)
scaffold0267 (238-297)||(269-329)


Alignment Details
Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 27 - 297
Target Start/End: Complemental strand, 14291763 - 14291493
Alignment:
Q  27 agtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttag 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  14291763 agtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttag 14291664  T
Q  127 ggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacac 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14291663 ggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacac 14291564  T
Q  227 tttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14291563 tttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 14291493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 27 - 297
Target Start/End: Original strand, 9296224 - 9296493
Alignment:
Q  27 agtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttag 126  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||||||||| ||||||||||||    
T  9296224 agtgtctattgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttttag 9296322  T
Q  127 ggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacac 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9296323 ggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtataagcttgaaggctattgtttcttgtaaccctttgtaacac 9296422  T
Q  227 tttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9296423 tttcatcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaa 9296493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 11098746 - 11099019
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  11098746 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagtacattagttggaaggatctaaagcttcctctagtgtcttctcttt 11098845  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  11098846 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaagcttgcaagctattgtttcttgtaaccctttgtaa 11098945  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11098946 cactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 11099019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 3492018 - 3491755
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| | | ||  | |||||||||||| | ||||||||| ||| ||||||||||||||||    
T  3492018 tctcttgggttggaaaaaacattgtaaacaccttgggtagtgag-attccacca-ttggaaggatcttaagcttcctcttgtgtcttctcttttagggtt 3491921  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  3491920 catattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttc 3491822  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3491821 atcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 3491755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 85 - 297
Target Start/End: Complemental strand, 25398711 - 25398500
Alignment:
Q  85 gttggaaggatctaaggcttcctctagtgccttctcttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgt 184  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||    
T  25398711 gttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgt 25398612  T
Q  185 gtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctga 284  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  25398611 gtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctga 25398513  T
Q  285 actgggtcaacaa 297  Q
    |||||||||||||    
T  25398512 actgggtcaacaa 25398500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 85 - 297
Target Start/End: Complemental strand, 25403849 - 25403638
Alignment:
Q  85 gttggaaggatctaaggcttcctctagtgccttctcttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgt 184  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||    
T  25403849 gttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgt 25403750  T
Q  185 gtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctga 284  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  25403749 gtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctga 25403651  T
Q  285 actgggtcaacaa 297  Q
    |||| ||||||||    
T  25403650 actgagtcaacaa 25403638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 85 - 271
Target Start/End: Complemental strand, 25407838 - 25407653
Alignment:
Q  85 gttggaaggatctaaggcttcctctagtgccttctcttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgt 184  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||    
T  25407838 gttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgt 25407739  T
Q  185 gtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattagg 271  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  25407738 gtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattagg 25407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 40739098 - 40738848
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| ||||||||||| |||| | ||||  | ||||||||||| || |||| || | ||| ||||||||||||||||    
T  40739098 tctcttgggttgggaaa--cattgtaaacaccttgggtaatgag-atttcacca-ttggaaggatcaaaagcttactattgtgtcttctcttttagggtt 40739003  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||| ||| | |||||||||||||||||||| | |||||| ||||          |||||||||||||    
T  40739002 catattgtgagagtggggaaacacaaatgggtagaaactaagacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttc 40738914  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| |||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  40738913 atcatagtggattggagagctgctctc-cccccagattaggtcatattggctgaactgggtcaacaa 40738848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 28259010 - 28259270
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| || ||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| |||| |    
T  28259010 tctcttgggttgggaaa--cattgtaaacatcttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt-aggggt 28259104  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||  |||  |||||||||||||||||||| | ||||||  |||||||||| ||||||||||||||    
T  28259105 cattattgagagagtggg-aaacacaaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacacttt 28259201  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  28259202 catcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaacaa 28259270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 39811894 - 39812068
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||  ||||||||| |||    
T  39811894 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt--cttgtaacctttt 39811991  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  39811992 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactggttcaacaa 39812068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 31 - 296
Target Start/End: Original strand, 23078304 - 23078562
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||| | ||||||||||| || ||||||| | ||| ||||||||  ||||||    
T  23078304 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcatca-ttggaaggatcaaaagcttccttttgtgtcttctctt--agggtt 23078397  T
Q  131 catattgtgagagtg-gggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    |||  | |||||||| ||| |||||| ||||||||||  || | |||||||||||||||||||| | ||||||  |||||||||| |||| |||||||||    
T  23078398 catcat-tgagagtgtgggtaacacaaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttctaacacttt 23078494  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattggct-gaactgggtcaaca 296  Q
    ||||||| |||||||||||| || |||||||||||||||||| |||||||| | ||||||||||||||    
T  23078495 catcatagtggattggagagttgttctctcccccatattaggtcatattggatcgaactgggtcaaca 23078562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 159 - 297
Target Start/End: Original strand, 44312567 - 44312704
Alignment:
Q  159 gggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctc 257  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  44312567 gggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgtaacactttc-tcatattggattggagagctgctctc 44312664  T
Q  258 tcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  44312665 tcccccagattaggccatattggctgaactgggtcaacaa 44312704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 32246966 - 32246793
Alignment:
Q  122 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttg 220  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||| ||||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| ||||    
T  32246966 tttagggttcatagtgtgagagtgggaaaataccaaagggtataatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttttg 32246869  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  32246868 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaacaaggtcaacaa 32246793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 36757595 - 36757855
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| ||||||    
T  36757595 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt-agggtt 36757689  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| || |||| ||||||||||  ||||  ||||||||||||||||||||| ||| ||  ||||| |||| ||||| ||||||||    
T  36757690 catcattgagagagtgggtaa-cacaaatgggtagaaattaggttttgttcttgtgtaagcttgaaagctttt--ttcttataactctttgaaacacttt 36757786  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||| | || |||||| |||||| |||||||| | ||| |||||||||||    
T  36757787 catcatactggattggagagctgttatcccccccagattaggtcatattggaccgaattgggtcaacaa 36757855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 123 - 297
Target Start/End: Complemental strand, 8040240 - 8040064
Alignment:
Q  123 ttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccct---t 218  Q
    ||||| ||||||||||||||||||| || ||| | ||||||||||  |||| |||||||||||||||||||| | |||| |  |||||||||| ||   |    
T  8040240 ttaggattcatattgtgagagtgggtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactctcttt 8040144  T
Q  219 tgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  8040143 tgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactgggtcaacaa 8040064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 123 - 297
Target Start/End: Original strand, 10707172 - 10707345
Alignment:
Q  123 ttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gt 221  Q
    ||||| |||||||||||||||||||  | |||| ||||||||||  |||| |||||||||||||||||||| | |||| |  |||||||||| |||| ||    
T  10707172 ttaggattcatattgtgagagtgggtga-cacagatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactcttttgt 10707268  T
Q  222 aacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||| |||||||| | |||||||||||||||    
T  10707269 aacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggaccgaactgggtcaacaa 10707345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 297
Target Start/End: Original strand, 8390069 - 8390243
Alignment:
Q  123 ttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgt 221  Q
    ||||| ||||||||||||||||||| || ||| | ||||||||||  |||| |||||||||||| ||||||| | |||| |  |||||||||| |||| |    
T  8390069 ttaggattcatattgtgagagtgggtgacacaaa-atgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaat--ttcttgtaactcttttt 8390165  T
Q  222 -aacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
     ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||| | |||||||||||||||    
T  8390166 taacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttggaccgaactgggtcaacaa 8390243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 297
Target Start/End: Complemental strand, 13569506 - 13569332
Alignment:
Q  123 ttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttg 220  Q
    ||||| ||||||||||||||||||| || | ||| | ||||||||  |||| ||||||||||||||| |||  | ||||   ||||||||||| | ||||    
T  13569506 ttaggattcatattgtgagagtgggtgacaaacaaa-gggtagaaattaggtcttgttcttgtgtaaacttataagcta--atttcttgtaactcttttg 13569410  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  13569409 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 13569332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 280
Target Start/End: Original strand, 42039588 - 42039744
Alignment:
Q  123 ttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgt 221  Q
    ||||| ||||||||||||||||||| || ||| | ||||||||||  |||| |||||| ||||||||||||| | |||| | ||||||||||| ||| ||    
T  42039588 ttaggattcatattgtgagagtgggtgacacaaa-atgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaat-tttcttgtaactcttcgt 42039685  T
Q  222 aacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    ||||||||||||||| |||||| ||||||||||||||||| || |||||| ||||||||    
T  42039686 aacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattgg 42039744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 34389115 - 34388862
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaag-gcttcctctagtgccttctcttttagggt 129  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| ||  ||||||| | |||  |||||||  ||| |    
T  34389115 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaaagcttccttttgtgttttctctt--aggat 34389022  T
Q  130 tcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacact 227  Q
    |||||||||||||||||| || ||| | ||||||||||  |||| ||||||||||||||||||  ||        ||||||||||| |||| ||||||||    
T  34389021 tcatattgtgagagtgggtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagct--aa--------tttcttgtaactcttttgtaacact 34388933  T
Q  228 ttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||||||||||| |||||||||||| |||||| |||||||| | ||| |||||||||||    
T  34388932 ttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaa 34388862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 10445397 - 10445537
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||| ||| | |||| |  |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||    
T  10445397 atgggtagaaattaggtcttgttcttgtgtaagattgtaagctaat--ttcttgtaactcttttgtaacactttcataatagtggattggagagctgctc 10445494  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||| |||||||| | ||||||| |||||||    
T  10445495 tctcccccagattaggtcatattggaccgaactggatcaacaa 10445537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 19344518 - 19344426
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  19344518 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccctagattaggccacattggctgaactgggtcaacaa 19344426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 19349376 - 19349284
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  19349376 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccctagattaggccacattggctgaactgggtcaacaa 19349284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 14698961 - 14699100
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | |||||||| ||||||||||| |||||||||| |||||||    
T  14698961 atgggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctc 14699057  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||| |||||||| | |||||||||||||||    
T  14699058 tctcccccagattaggtcatattggaccgaactgggtcaacaa 14699100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 20522319 - 20522224
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||| |||||| |||||||| | |||||||||||||||    
T  20522319 tttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 20522224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 21630042 - 21629948
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||    
T  21630042 tttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggactgaactgggtcaacaa 21629948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 34682287 - 34682427
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  || | ||||||||||||||||| || | |||| |  |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||    
T  34682287 atgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaat--ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctc 34682384  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||| | |||||||| | |||||||||||||||    
T  34682385 tctcccccagattatgtcatattggaccgaactgggtcaacaa 34682427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 39483075 - 39482935
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | ||||||||| |||||||||| ||||||||||  ||||||    
T  39483075 atgggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctc 39482978  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||| |||||||| | ||||| |||||||||    
T  39482977 tctcccccatattaggtcatattggaccgaactaggtcaacaa 39482935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 297
Target Start/End: Complemental strand, 17865330 - 17865207
Alignment:
Q  174 cttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggc 272  Q
    |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||||||| | |||||||||||||| ||||||     
T  17865330 cttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggt 17865233  T
Q  273 catatt-ggctgaactgggtcaacaa 297  Q
    |||||| | |||||||||||||||||    
T  17865232 catattcgactgaactgggtcaacaa 17865207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 33528619 - 33528714
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||| | ||||||||  ||||||||||| |||||||| | |||||||||||||||    
T  33528619 tttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattggaccgaactgggtcaacaa 33528714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 27149303 - 27149369
Alignment:
Q  214 ccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  27149303 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 27149369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 280
Target Start/End: Complemental strand, 33118280 - 33118158
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  || | |||||||||||||||||||  | ||||   |||||||||||   |||||||| ||||||||||| |||||||||| |||||||    
T  33118280 atgggtagaaattaagtcttgttcttgtgtaagcttataagcta--atttcttgtaactattttgtaactctttcatcatagtggattggagggctgctc 33118183  T
Q  256 tctcccccatattaggccatattgg 280  Q
    ||||||||| |||||| ||||||||    
T  33118182 tctcccccaaattaggtcatattgg 33118158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 31056188 - 31056067
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  || ||||||| |||| |||||||||||||| || ||||||||||||||||||    
T  31056188 atgggtagaaattaggtcttgttcttttgtaagcttataagctaat--ttattgtaactcttttgtaacactttcatcttagtggattggagagctgctc 31056091  T
Q  256 tctcccccatattaggccatattg 279  Q
    ||||||| | |||||| |||||||    
T  31056090 tctcccctagattaggtcatattg 31056067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 2869691 - 2869786
Alignment:
Q  204 tttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| |||||||| |||||||||| || |||||||||||||| |||||||||| | | |||| |||||||| | ||||||||| |||||    
T  2869691 tttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattggaccgaactgggtaaacaa 2869786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 25409897 - 25409854
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  25409897 tctcttgggttgggaaaaacattgtaaacaccttgggtagtgag 25409854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 39811847 - 39811894
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  39811847 gttgagagtgtctcttaggttgagaaaaacattgtaatcaccttgggt 39811894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 16940221 - 16940302
Alignment:
Q  217 tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||||||| |||||||||| |||| ||| ||||||| |||| | |||||||| | ||| |||||||||||    
T  16940221 tttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaa 16940302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 17010886 - 17010967
Alignment:
Q  217 tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||||||| |||||||||| |||| ||| ||||||| |||| | |||||||| | ||| |||||||||||    
T  17010886 tttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaa 17010967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 32247012 - 32246968
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  32247012 tgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 32246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 2838028 - 2838123
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| | |||||| |||||||||  || |||||||||||  |||||||||||||| | |||| |||||||| | |||||||||||||||    
T  2838028 tttcttgtaactcatttgtatcactttcattttagtggattggagatgtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaa 2838123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 1345552 - 1345634
Alignment:
Q  217 tttgtaacactttcatcatat-tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| |||||||||| ||  ||||| |||||| |||||||||||||| | |||| |||||||| | |||||||||||||||    
T  1345552 tttgtatcactttcatcttaagtggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaa 1345634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 409
Target Start/End: Original strand, 9296568 - 9296609
Alignment:
Q  369 acactagtctagggctgtttt-gttgttgtttgcttggaaac 409  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  9296568 acactagactagggctgtttttgttgttgtttgcttggaaac 9296609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 14291414 - 14291377
Alignment:
Q  373 tagtctagggctgtttt-gttgttgtttgcttggaaac 409  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  14291414 tagtctagggctgtttttgttgttgtttgcttggaaac 14291377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 32246713 - 32246676
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  32246713 acactagtctaggactgttttgttgttgttagcttgga 32246676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 17865469 - 17865428
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  17865469 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 17865428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 21630209 - 21630168
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  21630209 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 21630168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 35215646 - 35215586
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  35215646 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35215586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 35218023 - 35217963
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  35218023 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35217963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 4759893 - 4760167
Alignment:
Q  24 gagagtgtctcttgggttgggaaaa-acattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctctt 122  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  4759893 gagagagtctcttgggttgggaaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctctt 4759992  T
Q  123 ttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgta 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4759993 ttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgta 4760092  T
Q  223 acactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4760093 acactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 4760167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 21 - 297
Target Start/End: Complemental strand, 30655927 - 30655651
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  30655927 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc 30655828  T
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttg 220  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30655827 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttg 30655728  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30655727 taacactttcatcatattagattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 30655651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 33037627 - 33037898
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  33037627 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttt 33037726  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33037727 -agggttcatattgtgagagtggggaaacacatatgggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 33037825  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33037826 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 33037898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 10688959 - 10689235
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgga--aggatctaaggcttcctctagtgccttctct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||| |||||||    
T  10688959 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgggggaggatctaaagcttcctctagtgtcttctct 10689058  T
Q  122 tttagggttcatattgtgagagtggggaaaca-catatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttg 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10689059 tttagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctctg 10689158  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10689159 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 10689235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 24 - 297
Target Start/End: Complemental strand, 36979654 - 36979382
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  36979654 gagagtgtctcttaggttgggaaaa-cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttt 36979556  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979555 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 36979456  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36979455 cactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 36979382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 21 - 297
Target Start/End: Original strand, 18870377 - 18870654
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18870377 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc 18870476  T
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccc-ttt 219  Q
    ||||||||||||||||||||||||||||||| ||  | ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||    
T  18870477 ttttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaagcttgaatgctattgtttcttgtaaccctttt 18870576  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  18870577 gtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggatgaactgggtcaacaa 18870654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 21 - 297
Target Start/End: Original strand, 18852983 - 18853260
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctc 120  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18852983 gttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc 18853082  T
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccc-ttt 219  Q
    ||||||||||||||||||||||||||||||| ||  | ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||    
T  18853083 ttttagggttcatattgtgagagtggggaaataccaaagggtaaaatctagggtttgttcttgtgtaagcttgaatgctattgtttcttgtaaccctttt 18853182  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18853183 gtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 18853260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 21 - 297
Target Start/End: Complemental strand, 6311579 - 6311302
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  6311579 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatcaaaagcttcctctagtgacttctc 6311480  T
Q  121 --ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgt-aagcttgaaggctattgtttcttgtaaccct 217  Q
      ||||||||||||| ||||||||||||||||||||  | ||||||||||||||| ||| |||||||| ||||||||||||||  ||||||||||||| |    
T  6311479 ttttttagggttcatcttgtgagagtggggaaacaccaaagggtagaatctagggtttg-tcttgtgtaaagcttgaaggctagagtttcttgtaacctt 6311381  T
Q  218 ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6311380 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 6311302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 1261776 - 1262046
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||  | |||||||||||||| ||||||||||||| |||||||||    
T  1261776 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttt 1261873  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||| | |||||| ||||||||||||||||||||    
T  1261874 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgtacttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaa 1261972  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||    
T  1261973 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggttgaactgggtcaacaa 1262046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 31071058 - 31071322
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||||  | |||||||||||| | ||||||||| ||| ||||||||||||||||    
T  31071058 tctcttgggttgggaaaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcttaagcttcctcttgtgtcttctcttttagggtt 31071155  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  31071156 catattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttc 31071254  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| |||||| |||||||| | ||||| |||||||||    
T  31071255 atcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactcggtcaacaa 31071322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 26288158 - 26287906
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  26288158 tctcttgagttgggaaaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggtt 26288061  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    |||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||| | |||||| ||||          |||||||||||||    
T  26288060 catattgtgagagtgggg-aacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttc 26287973  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26287972 atcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 26287906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 26301415 - 26301163
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  26301415 tctcttgagttgggaaaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggtt 26301318  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    |||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||| | |||||| ||||          |||||||||||||    
T  26301317 catattgtgagagtgggg-aacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttc 26301230  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26301229 atcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 26301163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 26313409 - 26313157
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  26313409 tctcttgagttgggaaaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggtt 26313312  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    |||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||| | |||||| ||||          |||||||||||||    
T  26313311 catattgtgagagtgggg-aacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttc 26313224  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26313223 atcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 26313157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 7289831 - 7290006
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||| ||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  7289831 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatatagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 7289929  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7289930 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 7290006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 25328184 - 25328358
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||  ||||||||| |||    
T  25328184 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt--cttgtaacctttt 25328281  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25328282 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 25328358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 7412604 - 7412345
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||| ||||||| || ||||||| |  || ||||||||  ||||||    
T  7412604 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttgaaaggatcaaaagcttccttttatgtcttctctt--agggtt 7412511  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||  |||| |||||||||||||||||||| | | ||||  |||||||||| ||||||||||||||    
T  7412510 cattattgagagagtggg-aaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttatt--ttcttgtaactctttgtaacacttt 7412414  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  7412413 catcatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaa 7412345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 19175587 - 19175847
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||| ||||||||  |||||||| |||||||||||||||| | |||| || ||||||||||| || | ||||| | ||| ||||||||  ||||||    
T  19175587 tctcttggattgggaaa--cattgtaaacaccttgggtagtgag-atttcacta-ttggaaggatcaaaagtttccttttgtgtcttctctt--agggtt 19175680  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||| ||||||  |||| |||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  19175681 catcattgagagagtggg-aaacacaaatgtgtagaagttaggtcttgttcttgtgtaagcttgcaggctatt-tttcttgtaactctttgtaacacttt 19175778  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| |||||||||||| |||||||||||||| |||||| |||||||| | ||||| |||||||||    
T  19175779 catcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaa 19175847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 31 - 280
Target Start/End: Complemental strand, 4456292 - 4456050
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | || |||||||| || ||||||| | ||| ||||||||| ||||||    
T  4456292 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttagaaggatcaaaagcttccttttgtgtcttctcttt-agggtt 4456198  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| || |||| ||||||||||  || | ||||||||||||||||||||   ||||||  |||||||||| ||||||||||||||    
T  4456197 catcattgagagagtgggtaa-cacaaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctatt--ttcttgtaactctttgtaacacttt 4456101  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  4456100 catcatagtggattggagagctgctctctcccccagattaggccatattgg 4456050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 39784813 - 39784902
Alignment:
Q  206 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39784813 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 39784902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 297
Target Start/End: Original strand, 23799496 - 23799670
Alignment:
Q  123 ttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-g 220  Q
    ||||| |||||||||||| |||||| || ||| | ||||||||||  |||| |||||||||||||||||||| | |||| |  |||||||||| |||| |    
T  23799496 ttaggattcatattgtgacagtgggtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactcttttg 23799592  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||| |||||||||| |||||||||||| ||| |||||| |||||||| | |||||||||||||||    
T  23799593 taacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattggaccgaactgggtcaacaa 23799670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 19752347 - 19752487
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 256  Q
    ||||||||||  |||| |||||||||||||||||||| | |||||| ||||||||||| | |||||||||||||||| || |||||||||||||||||||    
T  19752347 atgggtagaaattaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaactcattgtaacactttcatcttagtggattggagagctgctct 19752445  T
Q  257 ctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| | | |||| |||||||| | ||||| |||||||||    
T  19752446 ctcccctagactaggtcatattggaccgaactaggtcaacaa 19752487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 10684252 - 10684344
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10684252 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 10684344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 35745488 - 35745396
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  35745488 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 35745396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 297
Target Start/End: Original strand, 26403155 - 26403323
Alignment:
Q  129 ttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacac 226  Q
    ||||||||||||||||| | || ||| | ||||||||||  |||| |||||||||||| ||||||| | |||| |  ||| | |||| |||| |||||||    
T  26403155 ttcatattgtgagagtgagtgacacaaa-atgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaat--ttcctataactcttttgtaacac 26403251  T
Q  227 tttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  26403252 tttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 26403323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 6127365 - 6127225
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  |||||||||| |||| ||||||||||||||||| ||||||||||||||||||    
T  6127365 atgggtagaaattaggtcttgttcttttgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctc 6127268  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||| ||||| |||||| |||||||| | |||||| ||||||||    
T  6127267 tcttccccaaattaggtcatattggaccgaactgagtcaacaa 6127225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 5702481 - 5702576
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| |||| |||||||||||||||||  ||||||||| | ||||||||||||||||||||| |||||||| | |||||||||||||||    
T  5702481 tttcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattggaccgaactgggtcaacaa 5702576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 4696609 - 4696689
Alignment:
Q  218 ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggct-gaactgggtcaacaa 297  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  4696609 ttgtaactctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaa 4696689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 7289784 - 7289831
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289784 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 7289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 25328013 - 25328058
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25328013 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 25328058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 25328139 - 25328184
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25328139 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 25328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 9765852 - 9765912
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  9765852 tggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 9765912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 6813782 - 6813723
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccc 262  Q
    ||||||||||||| |||||  |||||||||| ||||||||||||||||||||||||||||    
T  6813782 tttcttgtaacccctttgtgtcactttcatcttattggattggagagctgctctctcccc 6813723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 9054835 - 9054912
Alignment:
Q  204 tttcttgtaacc-ctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    |||||||||||| ||||||| |||||||||| || |||||| |||||||||||||||| ||| | |||| ||||||||    
T  9054835 tttcttgtaaccactttgtatcactttcatcttagtggattagagagctgctctctcctccagagtaggtcatattgg 9054912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 409
Target Start/End: Complemental strand, 6311226 - 6311186
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttggaaac 409  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  6311226 acactagtctagggctgctttgttgttgtttgcttggaaac 6311186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 39784684 - 39784728
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||    
T  39784684 tgagagagtctcttaggttgggaaaaacattgtaatcaccttggg 39784728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 3051219 - 3051162
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 260  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| ||||||||||    
T  3051219 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 3051162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 425
Target Start/End: Original strand, 4760243 - 4760299
Alignment:
Q  369 acactagtctagggctg-ttttgttgttgtttgcttggaaacttttttactcattgat 425  Q
    ||||||||||||||||| ||||||||||| ||||||||||||  |||| |||||||||    
T  4760243 acactagtctagggctgtttttgttgttg-ttgcttggaaaccattttgctcattgat 4760299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 7290083 - 7290120
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  7290083 acactagtctagggctgctttgttgttgtttgtttgga 7290120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 18813156 - 18813189
Alignment:
Q  238 tggattggagagctgctctctcccccatattagg 271  Q
    |||||||||| |||||||||||||||||||||||    
T  18813156 tggattggagggctgctctctcccccatattagg 18813189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 4696441 - 4696482
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  4696441 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 4696482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 9054253 - 9054294
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||  |||||||| ||||||||||||||||||||    
T  9054253 tctcttgggttgg--aaaacattataatcaccttgggtagtgag 9054294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 43079877 - 43079937
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  43079877 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 43082248 - 43082308
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  43082248 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43082308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 21 - 297
Target Start/End: Original strand, 20357363 - 20357639
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  20357363 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc 20357462  T
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgt-aagcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20357463 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcatgttcttgtgtaaagcttgaaggctattgtttcttgtaacccttt 20357562  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20357563 gtaacactttc-tcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaa 20357639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 24 - 297
Target Start/End: Complemental strand, 2058246 - 2057970
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgga--aggatctaaggcttcctctagtgccttctct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||| |||||||    
T  2058246 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgggggaggatctaaagcttcctctagtgtcttctct 2058147  T
Q  122 tttagggttcatattgtgagagtggggaaaca-catatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttg 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2058146 tttagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaagcttgaatgctattgtttcttgtaaccctttg 2058047  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2058046 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 2057970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 1533263 - 1533536
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||||||||| |||||||||    
T  1533263 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttt 1533361  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgtt-cttgtgtaagcttgaaggctattgtttcttgtaaccctttgta 222  Q
    |||||||||||||||||||||||| ||||||  | |||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||    
T  1533362 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctaggtcttgtttcttgtgtaagcttgcaagctattgtttcttgtaaccctttgta 1533461  T
Q  223 acactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  1533462 acactttcatcatattggattggagagatgctctctcccccagattaggccatattggctgaactgggtcaacaa 1533536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 21640076 - 21639813
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||||||| ||||||||||||||||    
T  21640076 tctcttgggttgggaaaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttttagggtt 21639979  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  21639978 catattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttc 21639880  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    || ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21639879 attatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 21639813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 21646274 - 21646011
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||||  | ||||||||||||||  |||||||||||| ||||||||||||||||    
T  21646274 tctcttgggttgggaaaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaatcttcctctagtgtcttctcttttagggtt 21646177  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||| ||||||||||    
T  21646176 catattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttttaacactttc 21646078  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  21646077 atcatagtggattggagagctgctctcttccctagattaggccatattggctgaactgggtcaacaa 21646011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 18409030 - 18408768
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||||  | ||  |||||||| | ||||||||| ||| |||| |||||||||||    
T  18409030 tctcttgggttgggaaaaacattgtaaacaccttgggtagtgag-atttcacca-ttaaaaggatcttaagcttcctcttgtgtcttc-cttttagggtt 18408934  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| | | |||| |||||||||||||||||||||||||||    
T  18408933 catattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagttatt-tttcttgtaaccctttgtaacactttc 18408835  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18408834 atcatactggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 18408768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 18413906 - 18413645
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| | ||||  | |||||||||||| | ||||||||| ||| |||| |||||||||||    
T  18413906 tctcttgggttgggaaaaacaatgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcttaagcttcctcttgtgtcttc-cttttagggtt 18413810  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||    
T  18413809 catattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaatctatt-tttcttgtaaccctttgtaacactttc 18413711  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  18413710 atcatagtggattggagagctgctctct-ccccagattaggccatattggctgaactgggtcaacaa 18413645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 120 - 297
Target Start/End: Complemental strand, 12406512 - 12406336
Alignment:
Q  120 cttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctt 218  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| ||    
T  12406512 cttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttt 12406414  T
Q  219 tgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  12406413 tgtaacactttc-tcatattggattggagagctattctctcccccagattaggccatattggctgaactgggtcaacaa 12406336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 12397091 - 12396916
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||||||||| |||||||||||||  | ||||||||||||||| |||||| ||||||| | || |||||||  ||| ||||||||| |||    
T  12397091 ttttagggttcatattgtgatagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagattaaaggctagagtt-cttgtaacctttt 12396993  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  12396992 gtaacactttc-tcatattggattggagagctgttctctcccccagattaggccatattggctgaactgggtcaacaa 12396916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 24024232 - 24024406
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||  |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||  ||||||||  |||    
T  24024232 ttttagggttcatcgtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt--cttgtaacatttt 24024329  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24024330 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 24024406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 47 - 297
Target Start/End: Complemental strand, 21983536 - 21983288
Alignment:
Q  47 aaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggttcatattgtgagagtgg 146  Q
    ||||||||||| |||||||||||||||| | ||||  | |||||||||||  | ||||||| | |||  |||||||| |||||||||||| |||||||||    
T  21983536 aaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcataagcttccttttgtgttttctcttt-agggttcatattttgagagtgg 21983440  T
Q  147 g-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt--gtaacactttcatcatattggatt 243  Q
    | || ||| | |||||||||| ||||| |||||||||||||||||||| | ||||||  |||||||||| ||||  ||||||||||||||||| ||||||    
T  21983439 gtgacacaaa-atgggtagaaactaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttttgtaacactttcatcatagtggatt 21983343  T
Q  244 ggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  21983342 ggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 21983288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 31109489 - 31109663
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| |   | ||||||||||||||| |||||| |||| || ||||||||||||  ||  ||||||||| |||    
T  31109489 ttttagggttcatagtgtgagagtgggaaaatatcaaagggtagaatctagggtttgttcatgtgcaaagcttgaaggctagagt--cttgtaacctttt 31109586  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  31109587 gtaacactttc-tcatattggattggagagctgctctctcccctagattaggccatattggctgaactgggtcaacaa 31109663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 2479600 - 2479341
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| |  |  ||||||||| ||||||    
T  2479600 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttatatcttctcttt-agggtt 2479506  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||  |||| |||||||||||||||||||| | ||||||  ||||| |||| ||||||||||||||    
T  2479505 cattattgagagagtggg-aaacacacatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttataactctttgtaacacttt 2479409  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattg-gctgaactgggtcaacaa 297  Q
    ||||||| |||||| ||||||||||||| |||| | |||||| |||||||  | |||||||||||||||    
T  2479408 catcatagtggatttgagagctgctctc-cccctagattaggtcatattgaaccgaactgggtcaacaa 2479341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 86 - 297
Target Start/End: Original strand, 44848568 - 44848777
Alignment:
Q  86 ttggaaggatctaaggcttcctctagtgccttctcttttagggttcat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgt 184  Q
    ||||||||||| || ||||||| | ||| ||||||||| || |||||| |||| ||||||||| ||||||| ||||||||||  |||| ||| |||||||    
T  44848568 ttggaaggatcaaaagcttccttttgtgtcttctcttt-agagttcattattgagagagtggg-aaacacaaatgggtagaaattaggtcttattcttgt 44848665  T
Q  185 gtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattg-gctg 283  Q
    ||||||||| | ||| ||  |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||||  | |    
T  44848666 gtaagcttgcaagctttt--ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaggttaggtcatattgaaccg 44848763  T
Q  284 aactgggtcaacaa 297  Q
    ||||||||||||||    
T  44848764 aactgggtcaacaa 44848777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 297
Target Start/End: Complemental strand, 29160055 - 29159807
Alignment:
Q  47 aaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaag-gcttcctctagtgccttctcttttagggttcatattgtgagagtg 145  Q
    ||||||||||| |||||||||||||||| | ||||  | ||||||||||| ||  ||||||| | |||  |||||||  ||| |||||||||||||||||    
T  29160055 aaacattgtaaacaccttgggtagtgag-atttcaaca-ttggaaggatcaaaaagcttccttttgtgttttctctt--aggattcatattgtgagagtg 29159960  T
Q  146 gg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggatt 243  Q
    || || ||| | ||||||||||  |||| |||||||||||||||||||| | |||| |  |||||||||| |||| ||||||||||||||||| ||||||    
T  29159959 ggtgacacaaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactcttttgtaacactttcatcatagtggatt 29159862  T
Q  244 ggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||||| | |||||| |||||||| | |||||||||||||||    
T  29159861 ggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaa 29159807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 19992408 - 19992318
Alignment:
Q  206 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19992408 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 19992318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 9189961 - 9190101
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 256  Q
    ||||||||||  |||| |||||||||||||||||||| | |||||| ||||||||||| | |||||||||||||||| || |||||||||||||||||||    
T  9189961 atgggtagaaattaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaactcattgtaacactttcatcttagtggattggagagctgctct 9190059  T
Q  257 ctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||| | |||| |||||||| | |||||||||||||||    
T  9190060 ctcccccagactaggtcatattggaccgaactgggtcaacaa 9190101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 2580533 - 2580394
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 256  Q
    |||||||||| ||||| |||||||||||||||||||| | ||||||  |||||||||| | |||||||||||||||| || |||||||||||||||||||    
T  2580533 atgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt--ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctct 2580436  T
Q  257 ctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||| | |||| |||||||| | ||| |||||||||||    
T  2580435 ctcccccagactaggtcatattggaccgaattgggtcaacaa 2580394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 211 - 297
Target Start/End: Complemental strand, 4866820 - 4866735
Alignment:
Q  211 taaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4866820 taaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 4866735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 16880169 - 16880078
Alignment:
Q  205 ttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||| || |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  16880169 ttcttgtaactctttgtaaaacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 16880078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 16885025 - 16884934
Alignment:
Q  205 ttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||| || |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  16885025 ttcttgtaactctttgtaaaacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 16884934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 24261311 - 24261403
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  24261311 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 24261403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 24266190 - 24266282
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  24266190 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 24266282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 297
Target Start/End: Complemental strand, 20284230 - 20284093
Alignment:
Q  159 gggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctct 258  Q
    ||||||||  |||| ||||||||| |||||||||  | |||| |  |||||||||| | |||||||||||||||| || |||||||||| ||||||||||    
T  20284230 gggtagaaattaggacttgttcttttgtaagcttataagctaat--ttcttgtaacgcattgtaacactttcatcttagtggattggagggctgctctct 20284133  T
Q  259 cccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| |||||| |||||||| | |||||||||||||||    
T  20284132 cccccagattaggtcatattggaccgaactgggtcaacaa 20284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 47263930 - 47263682
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||| ||||||||||  ||||||||  ||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||| ||| ||||||    
T  47263930 tctcttcggttgggaaa--cattgtaaataccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctattt-agggtt 47263836  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| |||| |||||  |||| |||||||||||||||||||| | ||||||  ||||| ||||          |||||    
T  47263835 cattattgagagagtggg-aaacacaaatggatagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttataac----------acttt 47263749  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||  |||||||||||||||| |||||||| | |||||||||||||||    
T  47263748 catcatagtggattggagagctgc--tctcccccatattaggtcatattggaccgaactgggtcaacaa 47263682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 2647649 - 2647789
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  2647649 atgggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 2647746  T
Q  256 tctcccccatattaggccatatt-ggctgaactgggtcaacaa 297  Q
    ||||||||| | |||| |||||| ||| ||| |||||||||||    
T  2647747 tctcccccagaataggtcatattgggccgaattgggtcaacaa 2647789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 46516263 - 46516403
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  || | |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  46516263 atgggtagaaattatgtcttgttcttgtgtaagcttttaagcta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 46516360  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| | |||||| |||||||| | |||||||||||||||    
T  46516361 tctcccctagattaggtcatattggaccgaactgggtcaacaa 46516403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 49091805 - 49091665
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | | || |  |||||||||| |||| ||||||||||||||||| |||||||||||| |||||    
T  49091805 atgggtagaaattaggtcttgttcttgtgtaagcttataaggtaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctc 49091708  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||| ||||| |||||| |||||||| || ||||||||||||||    
T  49091707 tcttccccagattaggtcatattggactaaactgggtcaacaa 49091665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 294
Target Start/End: Complemental strand, 56091 - 55955
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  56091 atgggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 55994  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaa 294  Q
    ||| ||||| |||||| |||||||| | ||||||||||||    
T  55993 tct-ccccagattaggtcatattggaccgaactgggtcaa 55955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 21812254 - 21812318
Alignment:
Q  233 catattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  21812254 catattggattggaaagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 21812318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 21989172 - 21988912
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | || |  | |||||||||||  | ||||||| || ||  |||||||| ||||||    
T  21989172 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-attttacca-ttggaaggatcataagcttcctttattgttttctcttt-agggtt 21989078  T
Q  131 catattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt--gtaacact 227  Q
    |||||| | |||||||| || ||| | |||||||||| |||||  || ||||||| |||||||| |  |||||  |||||||||| ||||  ||||||||    
T  21989077 catatttttagagtgggtgacacaaa-atgggtagaaactaggttttattcttgtataagcttgcaatctatt--ttcttgtaactctttttgtaacact 21988981  T
Q  228 ttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| | |||||||||||| ||  |||||| ||| |||||| |||||||| | |||||||||||||||    
T  21988980 ttcatcaaagtggattggagagttg--ctctcctccagattaggtcatattggaccgaactgggtcaacaa 21988912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 12397138 - 12397091
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12397138 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 12397091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 31109442 - 31109489
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109442 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 31109489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 33332448 - 33332543
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggct-gaactgggtcaacaa 297  Q
    ||||||||||| |||| |||||||||||||| || |||||||||| |||||||||||||||| |||||| |||||| | | |||||||||||||||    
T  33332448 tttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaa 33332543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 4873355 - 4873310
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4873355 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 4873310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 12406558 - 12406513
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12406558 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 12406513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 28617223 - 28617318
Alignment:
Q  204 tttcttgtaaccct-ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||  ||||| |||||||||| || ||||||||||||||||||||||||||| | |||| |||||||| | ||||||||| |||||    
T  28617223 tttcttgtaaccccattgtatcactttcatcttagtggattggagagctgctctctcccccagagtaggtcatattggaccgaactgggtaaacaa 28617318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 35960901 - 35960839
Alignment:
Q  217 tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattg 279  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||| |||||| |||||||    
T  35960901 tttgtaacactttcatcatagtggtttggagggctgctctctcccccagattaggtcatattg 35960839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 9185178 - 9185258
Alignment:
Q  218 ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||| || |||||||||||||| |||||||||||| | ||||  ||||||| | |||||||||||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaa 9185258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 24024185 - 24024232
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  24024185 gttgagagtgtctcttgggtttggaaaaacattgtaatcaccgtgggt 24024232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 297
Target Start/End: Original strand, 4796637 - 4796760
Alignment:
Q  174 cttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggc 272  Q
    |||||||||||||||||||  | ||||   ||||||||||| | ||||||||| |||||||||| |||||| ||| |||||| ||||||||| ||||||     
T  4796637 cttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggt 4796734  T
Q  273 catattgg-ctgaactgggtcaacaa 297  Q
    ||| |||| | ||||||||| |||||    
T  4796735 cattttggaccgaactgggttaacaa 4796760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 278
Target Start/End: Original strand, 23402967 - 23403086
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 256  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  |||||||||| | |||||||||||||||| || | |||||||| |||||||     
T  23402967 atgggtagaaattaggacttgttcttttgtaagcttataagctaat--ttcttgtaactcattgtaacactttcatcttagtagattggagggctgctca 23403064  T
Q  257 ctcccccatattaggccatatt 278  Q
    ||||| || |||||| ||||||    
T  23403065 ctccctcagattaggtcatatt 23403086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 5817268 - 5817327
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccc 262  Q
    ||||||||||||| |||||| |||||||||  || |||||||||||||||||||||||||    
T  5817268 tttcttgtaacccctttgtatcactttcatattagtggattggagagctgctctctcccc 5817327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 4866658 - 4866621
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  4866658 acactagtctaggactgttttgttgttgtttgcttgga 4866621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 12396840 - 12396803
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  12396840 acactagtctagggctgctttgttgttgtttgcttgga 12396803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 12406260 - 12406223
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  12406260 acactagtctagggctgctttgttgttgtttgcttgga 12406223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 7351712 - 7351652
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  7351712 tggattggagggctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 7351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 21812098 - 21812143
Alignment:
Q  23 tgagagtgtctcttgggttggg-aaaaacattgtaatcaccttggg 67  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||||    
T  21812098 tgagagtgtttcttaggttggggaaaaacattgtaatcaccttggg 21812143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 2580654 - 2580613
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||  |||||||||||| ||||||||||||||||    
T  2580654 tctcttgggttgg--aaaacattgtaaacaccttgggtagtgag 2580613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 4796501 - 4796542
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||  |||||||||||| ||||||||||||||||    
T  4796501 tctcttgggttgg--aaaacattgtaaacaccttgggtagtgag 4796542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 9185007 - 9185048
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  9185007 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 9185048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 20284353 - 20284312
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  20284353 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 20284312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 23402846 - 23402887
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  23402846 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 23402887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 31155971 - 31155911
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  31155971 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31155911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 24 - 297
Target Start/End: Complemental strand, 24742218 - 24741945
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  24742218 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttt 24742119  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742118 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 24742019  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24742018 cactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 24741945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 24 - 297
Target Start/End: Complemental strand, 29760919 - 29760646
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaa-cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctctt 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  29760919 gagagtgtctcttgggttgggaaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctctt 29760820  T
Q  123 ttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgtt-cttgtgtaagcttgaaggctattgtttcttgtaaccctttgt 221  Q
      |||||||||| |||||||||||||||||||  | |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  29760819 --agggttcatagtgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaagcttgcaggctattgtttcttgtaaccctttgt 29760722  T
Q  222 aacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29760721 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 29760646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 28468367 - 28468621
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  28468367 tctcttgggttgggaaaaatattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggtt 28468464  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||| ||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| |  ||||| ||||          |||||||||||||    
T  28468465 catattgagagagtggggaaacacaaatgggtagaatctaggtcttgttattgtgtaagcttgcaaactattttttc----------ttgtaacactttc 28468554  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  28468555 atcatagtggattggagagctgctctctcctccagattaggtcatattggctgaactgggtcaacaa 28468621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 31985466 - 31985726
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||  | ||||  | | ||||||||| || ||||||| | ||| ||||||||||||||||    
T  31985466 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgaa-atttcacca-tgggaaggatcaaaagcttccttttgtgtcttctcttttagggtt 31985561  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    || |||||||||||||| ||||||| ||||||||||  |||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  31985562 cacattgtgagagtggg-aaacacaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttc 31985659  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||| ||||| |||||| |||||||| | |||||||||||||||    
T  31985660 atcatagtggattggagagctgctctct-ccccagattaggtcatattggaccgaactgggtcaacaa 31985726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 9224312 - 9224487
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||||||||||  | ||||||| ||||||| |||||| ||||||| ||||||||||||  ||| ||| ||||| |||    
T  9224312 ttttagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttctaacctttt 9224410  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9224411 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 9224487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 51520637 - 51520462
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  51520637 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 51520539  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  51520538 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggcagaactgggtcaacaa 51520462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 9229099 - 9229274
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||||||||||  | ||||||| ||||||| |||||| ||||||| ||||||||||||  ||| ||| ||||| |||    
T  9229099 ttttagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttctaacctttt 9229197  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  9229198 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggttaacaa 9229274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 122 - 297
Target Start/End: Original strand, 45347723 - 45347897
Alignment:
Q  122 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttg 220  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| ||||||||||||  | | ||||||||| ||||    
T  45347723 tttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagaggt-cttgtaaccttttg 45347821  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  45347822 taacactttc-tcatattggattggagagctgctctctcccccagattaagccatattggctgaactgggtcaacaa 45347897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 122 - 297
Target Start/End: Original strand, 45357203 - 45357376
Alignment:
Q  122 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttg 220  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| ||||    
T  45357203 tttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttttg 45357300  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  45357301 taacactttc-tcatattggattggagagctgctctctcccccagattatgccatattggctgaactgggtcaacaa 45357376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 3814202 - 3814029
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||| ||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  3814202 ttttagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 3814106  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3814105 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 3814029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 5396504 - 5396764
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||| ||| || |||| || | ||| ||||||||| ||||||    
T  5396504 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaagaatcaaaagctttcttttgtgtcttctcttt-agggtt 5396598  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||| | || |||| ||||||||||  |||| |||||||||||||||||||| | ||||||  |||||||||| ||||| ||||||||    
T  5396599 catcattgagagagtgagtaa-cacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgcaacacttt 5396695  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||| ||| |||||| |||||||| | |||||||||||||||    
T  5396696 catcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaa 5396764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 297
Target Start/End: Complemental strand, 5732839 - 5732670
Alignment:
Q  125 agggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||| ||| |||||||||||| ||| ||  | ||||||| ||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| |||||||    
T  5732839 agggtttatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttttgtaa 5732743  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5732742 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 5732670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 16623126 - 16623386
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | |||  || ||||||||| ||    
T  16623126 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtg--ttttcttttaggatt 16623219  T
Q  131 catattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactt 228  Q
    ||||||||||||||||| || ||| | ||||||||||  |||| ||||||||| |||||||||    |||| |  |||||||||| |||| |||||||||    
T  16623220 catattgtgagagtgggtgacacaaa-atgggtagaaattaggtcttgttcttctgtaagcttattagctaat--ttcttgtaactcttttgtaacactt 16623316  T
Q  229 tcatcatattggattggagagctgctctctcccccatattaggccatattg-gctgaactgggtcaacaa 297  Q
    |||||||| ||||||||||||||||||||||| ||| |||||| |||||||  | |||||||||||||||    
T  16623317 tcatcatagtggattggagagctgctctctcctccagattaggtcatattgaaccgaactgggtcaacaa 16623386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 138 - 296
Target Start/End: Original strand, 36315163 - 36315321
Alignment:
Q  138 tgagagtg-gggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcata 236  Q
    |||||||| ||| |||||| ||||||||||  |||| |||| ||||||||||||||  | ||||   ||||||||||| |||||||||||||||||||||    
T  36315163 tgagagtgtgggtaacacaaatgggtagaaattaggtcttgctcttgtgtaagcttctaagcta--atttcttgtaactctttgtaacactttcatcata 36315260  T
Q  237 ttggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaaca 296  Q
     ||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||    
T  36315261 gtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaaca 36315321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 138 - 296
Target Start/End: Original strand, 36329372 - 36329530
Alignment:
Q  138 tgagagtg-gggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcata 236  Q
    |||||||| ||| |||||| ||||||||||  |||| |||| ||||||||||||||  | ||||   ||||||||||| |||||||||||||||||||||    
T  36329372 tgagagtgtgggtaacacaaatgggtagaaattaggtcttgctcttgtgtaagcttctaagcta--atttcttgtaactctttgtaacactttcatcata 36329469  T
Q  237 ttggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaaca 296  Q
     ||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||    
T  36329470 gtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaaca 36329530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 56146664 - 56146783
Alignment:
Q  169 tagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatat 267  Q
    ||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  56146664 tagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagat 56146761  T
Q  268 taggccatattggctgaactgg 289  Q
    ||||||||||||||||||||||    
T  56146762 taggccatattggctgaactgg 56146783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 5147856 - 5147681
Alignment:
Q  122 tttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt- 219  Q
    ||||||||||||||||||||| |||| || ||| | ||||||||||  |||| |||||||||||||||||||| | ||||||  ||||||||||  |||     
T  5147856 tttagggttcatattgtgagaatgggtgacacaaa-atgggtagaaattaggccttgttcttgtgtaagcttgcaagctatt--ttcttgtaactatttt 5147760  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||| |||||| |||||||| | |||||||||||||||    
T  5147759 gtaacactttcatcataatggactggagagctgctccctcccccaaattaggtcatattggaccgaactgggtcaacaa 5147681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 18855821 - 18855732
Alignment:
Q  206 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18855821 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 18855732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 123 - 297
Target Start/End: Complemental strand, 3777726 - 3777553
Alignment:
Q  123 ttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgt 221  Q
    ||||| ||||||||||||||||||| || ||| | ||||||||||  |||  |||||||||||||||| ||| | ||||||  |||||||||| ||||||    
T  3777726 ttaggattcatattgtgagagtgggtgacacaaa-atgggtagaaattagatcttgttcttgtgtaagtttgcaagctatt--ttcttgtaactctttgt 3777630  T
Q  222 aacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||| |||||||||||||| |||||||| | | ||||||  ||||||| | |||||||||||||||    
T  3777629 aacactttcatcatagtggattggagagctactctctcctctagattaggttatattggaccgaactgggtcaacaa 3777553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 3796472 - 3796612
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||| ||||||| | |||| |  |||||||||| |||| ||||||||||||||||| |||||| ||||| |||||    
T  3796472 atgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctc 3796569  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||| |||||||| | |||||||||||||||    
T  3796570 tctcccccatattaggtcatattggacggaactgggtcaacaa 3796612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 10047523 - 10047383
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  10047523 atgggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 10047426  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||| |||||||| | |||||||||||||||    
T  10047425 tctcccccagattaggtcatattggaccgaactgggtcaacaa 10047383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 5143438 - 5143263
Alignment:
Q  122 tttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt- 219  Q
    ||||||||||||||| |||||||||  || ||| | ||| ||||||  |||| |||||||||||||| ||||| | ||||||  |||||||||   |||     
T  5143438 tttagggttcatattctgagagtggctgacacaaa-atgagtagaaattaggtcttgttcttgtgtatgcttgcaagctatt--ttcttgtaaatttttt 5143342  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||||| | ||||| |||||||||    
T  5143341 gtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaa 5143263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 39246093 - 39245998
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||| |||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  39246093 tttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 39245998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 297
Target Start/End: Original strand, 38152395 - 38152532
Alignment:
Q  160 ggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctctct 258  Q
    |||||||  |||| |||||||||||||||||||  | ||||   |||||| |||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  38152395 ggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttataactcttttgtaacactttcaccatagtggattggagagctgctctct 38152492  T
Q  259 cccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| |||| | |||||||| | |||||||||||||||    
T  38152493 cccccagattatgtcatattggaccgaactgggtcaacaa 38152532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 5269204 - 5269284
Alignment:
Q  218 ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| |||||| |||||||| | ||||| |||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaa 5269284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 24333894 - 24333831
Alignment:
Q  217 tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  24333894 tttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattgg 24333831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 51520684 - 51520637
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520684 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 51520637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 297
Target Start/End: Original strand, 16630650 - 16630773
Alignment:
Q  174 cttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggc 272  Q
    |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| ||||||||||||||| ||||||| ||| |||| |     
T  16630650 cttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgt 16630747  T
Q  273 catattgg-ctgaactgggtcaacaa 297  Q
    |||||||| | ||||| |||||||||    
T  16630748 catattggaccgaactaggtcaacaa 16630773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 6743427 - 6743507
Alignment:
Q  217 tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaaca 296  Q
    |||||||||||||||||||| |||||||||| |||||||||||||  | |||||| |||||||| | ||||||||||||||    
T  6743427 tttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattggaccgaactgggtcaaca 6743507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 25862035 - 25862115
Alignment:
Q  218 ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||||| |||||||||| || ||||||| |||||||||||| |||||||| | |||||| ||||||||    
T  25862035 ttgtaacactttcatcatagtggattggagggccgctctcttccccatattaggtcatattggaccgaactgagtcaacaa 25862115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 18712624 - 18712671
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18712624 gttgagagtgtctcttgggttgggaaaaacattgttatcaccttgggt 18712671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 1983298 - 1983375
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||||| |||| ||||||||    
T  1983298 tttcttgtaacccctttgtatcactttgatcctagtggattggagagctgctatctcccccatagtaggtcatattgg 1983375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 8689329 - 8689576
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||| ||| |||||||| ||||||| | ||||  | ||||||||||| || | ||||| | ||| ||||||||  ||||||    
T  8689329 tctcttgggttgggaaa--cattttaaacaccttggatagtgag-atttcacca-ttggaaggatcaaaagtttccttttgtgtcttctctt--agggtt 8689422  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| || |||||||  |||| |||||||||||||||||||| | |||||  ||||          ||||||||||||    
T  8689423 catcattgagagagtggg-aaacacaaattggtagaaattaggtcttgttcttgtgtaagcttgcaagctat--tttc----------ttgtaacacttt 8689509  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||| ||||||||   ||||||||||||||||  |||||||| | ||||||| |||||||    
T  8689510 catcatagtggataggagagct--cctctcccccatattagatcatattggaccgaactggatcaacaa 8689576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 42599526 - 42599667
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctg--ct 254  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  |||||||||| | |||||||| ||||||| || |||||||||| | ||  ||    
T  42599526 atgggtagaaattaggtcttgttcttttgtaagcttataagctaat--ttcttgtaactcattgtaacattttcatcttagtggattggagggttgctct 42599623  T
Q  255 ctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||| | |||||||| ||||| |||||||||||    
T  42599624 ctctcccccatattatgtcatattggactgaattgggtcaacaa 42599667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 45347677 - 45347721
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  45347677 tgagagtgtctcttaggttgggaaaaacattgtaatcaccttggg 45347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 9224265 - 9224312
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||    
T  9224265 gttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggt 9224312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 9229052 - 9229099
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||    
T  9229052 gttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggt 9229099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 16628705 - 16628815
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| ||||||||||||||| || ||||  | ||||||||||| || ||||||| | |||  || ||||||||| ||    
T  16628705 tctcttgggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca-ttggaaggatcaaaagcttccttttgtg--ttttcttttaggatt 16628798  T
Q  131 catattgtgagagtggg 147  Q
    |||||||||||||||||    
T  16628799 catattgtgagagtggg 16628815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 3814247 - 3814202
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  3814247 tgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggt 3814202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 5112336 - 5112275
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctccccca 264  Q
    ||||||||||||| ||||||||||||||||  || |||||||||||||||||||| ||||||    
T  5112336 tttcttgtaacccatttgtaacactttcatattagtggattggagagctgctctcaccccca 5112275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 9224563 - 9224600
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9224563 acactagtctagggctgttttgttgttgtttgcttgga 9224600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 9229350 - 9229387
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9229350 acactagtctagggctgttttgttgttgtttgcttgga 9229387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 5732888 - 5732844
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  5732888 tgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 5732844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 34495822 - 34495882
Alignment:
Q  205 ttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctccccca 264  Q
    |||||||||||| |||||| |||||||||| || |||||||||| ||||||||||||||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctccccca 34495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 3813952 - 3813915
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  3813952 acactagtctaggactgttttgttgttgtttgcttgga 3813915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 39774303 - 39774380
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    ||||||||||||  |||||| |||||||||  || ||||||||||||||||||| ||||||| | |||| ||||||||    
T  39774303 tttcttgtaacctatttgtatcactttcattttagtggattggagagctgctctatcccccagagtaggtcatattgg 39774380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 51520385 - 51520348
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  51520385 acactagtctagggctgctttgttgttgtttgcttgga 51520348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 56146868 - 56146905
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  56146868 acactagtctagggctgctttgttgttgtttgcttgga 56146905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 18855950 - 18855906
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| || |||| ||||||||||||||||||||||||||||||    
T  18855950 tgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 18855906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 45357157 - 45357201
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| || |||| ||||||||||||||||||||||||||||||    
T  45357157 tgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 45357201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 404
Target Start/End: Original strand, 45347967 - 45348009
Alignment:
Q  362 ttgcttcacactagtctagggctgttttgttgttgtttgcttg 404  Q
    |||||| ||||||||||||| |||||||||||||||| |||||    
T  45347967 ttgctttacactagtctaggactgttttgttgttgttagcttg 45348009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 404
Target Start/End: Original strand, 45357446 - 45357488
Alignment:
Q  362 ttgcttcacactagtctagggctgttttgttgttgtttgcttg 404  Q
    |||||| ||||||||||||| |||||||||||||||| |||||    
T  45357446 ttgctttacactagtctaggactgttttgttgttgttagcttg 45357488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 54867268 - 54867188
Alignment:
Q  217 tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||||||| | ||||| || |||||||||| ||||| | |||| |||||||| | |||||||||||||||    
T  54867268 tttgtaacattttcatcatagttgattgaagggctgctctct-ccccagactaggtcatattggaccgaactgggtcaacaa 54867188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 3777813 - 3777772
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  3777813 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 3777772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 5112501 - 5112460
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  5112501 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 5112460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 10047645 - 10047604
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  10047645 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 10047604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 16931849 - 16931789
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  16931849 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16931789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 16934203 - 16934143
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  16934203 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16934143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 22780433 - 22780373
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  22780433 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 409
Target Start/End: Complemental strand, 29760571 - 29760532
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttggaaac 409  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  29760571 acactagtctagggttgttttgttgttg-ttgcttggaaac 29760532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 44599898 - 44599838
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  44599898 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 44599838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 2671405 - 2671678
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  2671405 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttt 2671504  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||||||||||    
T  2671505 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttggtcttgtgtaagcttgcaatctattgtttcttgtaaccctttgtaa 2671604  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2671605 cactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 2671678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 8738882 - 8739155
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||     
T  8738882 gagagtatctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtcttctcttc 8738981  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8738982 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 8739081  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8739082 cactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 8739155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 9091120 - 9091393
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||     
T  9091120 gagagtatctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtcttctcttc 9091219  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9091220 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 9091319  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9091320 cactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 9091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 40372615 - 40372887
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  40372615 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttt 40372714  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  40372715 tagggttcatattatgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaa 40372813  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40372814 cactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 40372887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 21 - 297
Target Start/End: Complemental strand, 7167526 - 7167249
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaa-cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttct 119  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  7167526 gttgagagtgtctcttgggttgggaaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttct 7167427  T
Q  120 cttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||||||||||||||||||||| ||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7167426 cttttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt 7167327  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7167326 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 7167249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 24 - 297
Target Start/End: Complemental strand, 8477642 - 8477367
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  8477642 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttt 8477543  T
Q  124 tagggttcatattgtgagagt-ggggaaacacatatgggtagaatctagggcttg-ttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgt 221  Q
    ||||||||||||||||||||| ||||||||||  | |||||||||||||| |||| || ||||||||||||| | |||||||||||||||||||||||||    
T  8477542 tagggttcatattgtgagagtgggggaaacaccaaagggtagaatctaggtcttgtttattgtgtaagcttgcaagctattgtttcttgtaaccctttgt 8477443  T
Q  222 aacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8477442 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 8477367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 21 - 297
Target Start/End: Original strand, 28503680 - 28503956
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctc 120  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  28503680 gttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctc 28503779  T
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgt-aagcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||| || ||||||||| ||||||||||||||  ||||||||||||| |||    
T  28503780 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaacctttt 28503879  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  28503880 gtaacactttc-tcatattggattggagagctgctctcttccccagattaggccatattggctgaactgggtcaacaa 28503956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 21 - 258
Target Start/End: Original strand, 28501513 - 28501750
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  28501513 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctc 28501612  T
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgt-aagcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||| || ||||||||| ||||||||||||||  ||||||||||||| |||    
T  28501613 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaacctttt 28501712  T
Q  220 gtaacactttcatcatattggattggagagctgctctct 258  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  28501713 gtaacactttc-tcatattggattggagagctgctctct 28501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 26928421 - 26928683
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| ||||||||||| |||| | ||||  | ||||||||||| || ||||||||| ||| ||||||||||||||||    
T  26928421 tctcttgggttgggaaa--cattgtaaacaccttgggtaatgag-atttcacca-ttggaaggatcaaaagcttcctcttgtgtcttctcttttagggtt 26928516  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  26928517 catattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctattttttcttgtaaccctttgtaacactttc 26928616  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| |||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||    
T  26928617 atcatagtggattggagagttgctctctcccccagattaggtcatattggctgaactgggtcaacaa 26928683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 1306216 - 1305953
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||||  | |||||||||||| | ||||||||| ||| ||||||||||||||||    
T  1306216 tctcttgggttgggaaaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcttaagcttcctcttgtgtcttctcttttagggtt 1306119  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||| ||||||||||||||||| |||||||||| ||| | |||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||    
T  1306118 catattgagagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaaactatt-tttcttgtaaccctttgtaacactttc 1306020  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||| || ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  1306019 atcgtagtggattggagagctgctatctcccctagattaggccatattggctgaactgggtcaacaa 1305953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 32143587 - 32143325
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||  |||||||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||||| ||| ||||||||||||||||    
T  32143587 tctcttgggttgg--aaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttcctcttgtgtcttctcttttagggtt 32143492  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  32143491 catattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttc 32143393  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| |||||| |||||||| | ||||| |||||||||    
T  32143392 atcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaa 32143325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 27453224 - 27452962
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||| |||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||||||||||    
T  27453224 tctcttgggttggcaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttttagggtt 27453129  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||| ||||||||||||||||| ||||||||||  ||||  ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  27453128 catattgagagagtggggaaacacaaatgggtagaaaataggaattgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttc 27453030  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||  |||||| |||||||| | ||||||| |||||||    
T  27453029 atcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaa 27452962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 22173100 - 22173275
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  22173100 ttttagggttcatattaggagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 22173198  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22173199 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 22173275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 27974774 - 27975035
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||| ||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| ||||||    
T  27974774 tctcttgggtcgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt-agggtt 27974868  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| |||| |||| ||||||| ||||||||||  |||| |||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||    
T  27974869 cattattgagagaatggg-aaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaactctttgtaacacttt 27974966  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  27974967 catcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 27975035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 16264613 - 16264354
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||  ||||||    
T  16264613 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctctt--agggtt 16264520  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| || |||| ||| ||||||  |||| |||||||||||| ||||||| | ||||||  |||||||||| ||||||||||||||    
T  16264519 catcattgagagagtgggtaa-cacaaatgtgtagaaattaggtcttgttcttgtggaagcttgcaagctatt--ttcttgtaactctttgtaacacttt 16264423  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||||||| | ||||| |||||||||    
T  16264422 catcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaa 16264354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 123 - 280
Target Start/End: Original strand, 6794623 - 6794778
Alignment:
Q  123 ttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgta 222  Q
    |||||||||||||||||||||||||  | |||| ||||||||||  |||| |||||||||||||||||||| | |||| | ||||||||||| |||||||    
T  6794623 ttagggttcatattgtgagagtgggtga-cacaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctaat-tttcttgtaactctttgta 6794720  T
Q  223 acactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  6794721 acactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgg 6794778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 27986278 - 27986529
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||||||||||    
T  27986278 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttttagggtt 27986373  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
     |||||| |||||| |||||||||| ||||||||||  |||| |||||||||||||||||||| | ||| || ||||          |||||||||||||    
T  27986374 gatattgagagagt-gggaaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagct-ttttttc----------ttgtaacactttc 27986461  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  27986462 atcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 27986529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 8370311 - 8370569
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| || ||||||||||||| | ||||  | ||||||||||| || | ||||| | |||  |||||||  ||| ||    
T  8370311 tctcttgggttgggaaa--cattgtaaacatcttgggtagtgag-atttcacca-ttggaaggatcaaaagtttccttttgtgttttctctt--aggatt 8370404  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    |||||||||||||||||  | |||| ||||||||||  || | |||||||||||||||||||  | ||||   ||||||||||| |||||||||||||||    
T  8370405 catattgtgagagtgggtga-cacaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagcta--atttcttgtaactctttgtaacactttc 8370501  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  8370502 atcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 8370569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 297
Target Start/End: Complemental strand, 18656609 - 18656440
Alignment:
Q  125 agggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||| ||| |||||||||||| ||| ||  | ||||||| ||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| |||||||    
T  18656609 agggtttatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatgctagagt--cttgtaaccttttgtaa 18656513  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18656512 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 18656440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 33386497 - 33386749
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||| ||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||||||||||    
T  33386497 tctcttgggttgagaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttttagggtt 33386592  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||  |||| |||||||||||||||||||| |  ||||| ||||          ||||||||||||    
T  33386593 cattattgagagagtggg-aaacacaaatgggtagaaattaggacttgttcttgtgtaagcttgcaaactatt-tttc----------ttgtaacacttt 33386680  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||||||| | ||||||| |||||||    
T  33386681 catcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaa 33386749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 36029357 - 36029097
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | |||  |||||||  ||| ||    
T  36029357 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgttttctctt--aggatt 36029264  T
Q  131 catattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactt 228  Q
    |||||| |||||||| | || ||| | ||||||||||  |||| |||||||||||||||| ||| | |||| |  |||||||||| |||| |||||||||    
T  36029263 catattttgagagtgagtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaat--ttcttgtaactcttttgtaacactt 36029167  T
Q  229 tcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||| ||||||||||||||||| ||||||||| |||||| |||||||| | |||||||||||||||    
T  36029166 tcatcatagtggattggagagctgctttctcccccagattaggtcatattggacagaactgggtcaacaa 36029097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 21711486 - 21711227
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| ||||||| |||||||| | ||||  | ||||||||||| || ||||||| | |||  |||||||  ||| ||    
T  21711486 tctcttgggttgggaaa--cattgtaaacaccttgagtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgttttctctt--aggatt 21711393  T
Q  131 catattgtgagagtg-gggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    |||  | |||||||| ||| |||||| ||||||||||  |||| |||| ||||||||||||||  | ||||   ||||||||||| ||||||||||||||    
T  21711392 cattat-tgagagtgtgggtaacacaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagcta--atttcttgtaactctttgtaacacttt 21711296  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| |||||| |||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  21711295 catcatagtggatttgagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 21711227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 40592604 - 40592865
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaag-gcttcctctagtgccttctcttttagggt 129  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| ||  ||||||| | |||  |||||||  ||| |    
T  40592604 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaaagcttccttttgtgttttctctt--aggat 40592697  T
Q  130 tcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacact 227  Q
    |||||||||||||||||| || ||| | ||||||||||  |||   ||||||||||||||||||| | |||| |  |||||||||| |||| ||||||||    
T  40592698 tcatattgtgagagtgggtgacacaaa-atgggtagaaattagattttgttcttgtgtaagcttgtaagctaat--ttcttgtaactcttttgtaacact 40592794  T
Q  228 ttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| | |||||||||||| ||||||||| || |||||| |||||||| | |||||||||||||||    
T  40592795 ttcatcatagtcgattggagagcttctctctcccacagattaggtcatattggaccgaactgggtcaacaa 40592865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 18552826 - 18552966
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  18552826 atgggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 18552923  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||| |||||||| | |||||||||||||||    
T  18552924 tctcccccagattaggtcatattggaccgaactgggtcaacaa 18552966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 2672919 - 2673011
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  2672919 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 2673011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 2677075 - 2677167
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  2677075 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 2677167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 8512314 - 8512222
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  8512314 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 8512222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 8517194 - 8517102
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  8517194 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 8517102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 32475580 - 32475490
Alignment:
Q  205 ttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||| || |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  32475580 ttcttgtaactctttgtaa-acattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 32475490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 32480438 - 32480348
Alignment:
Q  205 ttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||| || |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  32480438 ttcttgtaactctttgtaa-acattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 32480348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 1736248 - 1736388
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | | || |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  1736248 atgggtagaaattaggtcttgttcttgtgtaagcttataagttaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 1736345  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||| |||||||| | |||||||||||||||    
T  1736346 tctcccccagattaggtcatattggaccgaactgggtcaacaa 1736388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 280
Target Start/End: Complemental strand, 48438358 - 48438236
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  48438358 atgggtagaaattaggtcttgttcttgtgtaagcttatatgcta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 48438261  T
Q  256 tctcccccatattaggccatattgg 280  Q
    ||||||||| |||||| ||||||||    
T  48438260 tctcccccagattaggtcatattgg 48438236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 30709733 - 30709873
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||| ||||||||||||||  | ||||   ||||||||||| | ||||||||| |||||||||| |||||||||| |||||||    
T  30709733 atgggtagaaattaggtcttgctcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctc 30709830  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||| |||||||| | |||||||||||||||    
T  30709831 tctcccccagattaggtcatattggaccgaactgggtcaacaa 30709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 297
Target Start/End: Original strand, 3715911 - 3716085
Alignment:
Q  123 ttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-g 220  Q
    ||||| |||||||||||| |||||| || ||| | ||||||||||  || | |||||||||||||||| ||| | |||| |  |||||||||| |||| |    
T  3715911 ttaggattcatattgtgaaagtgggtgacacaaa-atgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaat--ttcttgtaactcttttg 3716007  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||| | |||||||||||||||||||| || | |||||| |||||||| | |||||||||||||||    
T  3716008 taacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattggaccgaactgggtcaacaa 3716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 35 - 253
Target Start/End: Complemental strand, 35925738 - 35925529
Alignment:
Q  35 ttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggttcata 134  Q
    |||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | |||  |||||||  ||| ||||||    
T  35925738 ttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgttttctctt--aggattcata 35925645  T
Q  135 ttgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatca 234  Q
    |||||||||||||  | |||| ||||||||||  ||||  ||||||| ||||||||||  |  ||| |  |||||||||| |||||||||||||||||||    
T  35925644 ttgtgagagtgggtga-cacaaatgggtagaaattaggttttgttctagtgtaagcttataaactaat--ttcttgtaactctttgtaacactttcatca 35925548  T
Q  235 tattggattggagagctgc 253  Q
    || ||||||||||| ||||    
T  35925547 tagtggattggagaactgc 35925529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 25795925 - 25795785
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  |||||||||| |||| |||||||||||||| || | ||||||||||||||||    
T  25795925 atgggtagaaattaggtcttgttcttttgtaagcttataagctaat--ttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctc 25795828  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||| |||||||| | ||||| |||||||||    
T  25795827 tctcccccagattaggtcatattggaccgaactaggtcaacaa 25795785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 24968204 - 24968112
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| ||||||||||||||||||| |||||||||| | |||| |||| ||||||||||||||||||||||    
T  24968204 ttcttgtaactcttttgtaacacattca-catattggattggagagctactctctccccaaaattaagccacattggctgaactgggtcaacaa 24968112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 22173053 - 22173100
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22173053 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 22173100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 3328300 - 3328439
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 256  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  |||||||||| | |||||||||||||||| || ||||||| || ||||||||    
T  3328300 atgggtagaaattaggacttgttcttttgtaagcttataagctaat--ttcttgtaactcattgtaacactttcatcttagtggattgaagggctgctct 3328397  T
Q  257 ctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||| | | |||||| ||||||||  ||||||||||||||||    
T  3328398 ctcctctagattaggtcatattggaatgaactgggtcaacaa 3328439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 37466389 - 37466295
Alignment:
Q  204 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| | |||||||||||||||| || |||||||||| ||| |||||||||||| |||||| |||||||| | |||||| ||||||||    
T  37466389 tttcttgtaactcattgtaacactttcatcttagtggattggagggctactctctcccccagattaggtcatattggaccgaactgtgtcaacaa 37466295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 280
Target Start/End: Complemental strand, 40844795 - 40844674
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||| ||| |||||||    
T  40844795 atgggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctc 40844698  T
Q  256 tctcccccatattaggccatattgg 280  Q
    ||| ||||| |||||| ||||||||    
T  40844697 tct-ccccagattaggtcatattgg 40844674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 26299087 - 26298992
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattg-gctgaactgggtcaacaa 297  Q
    ||||||||||| |||| ||||||||||||||||| | |||||||| |||||||||||||||| |||| | |||||||  | |||||||||||||||    
T  26299087 tttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattgaaccgaactgggtcaacaa 26298992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 1417479 - 1417573
Alignment:
Q  204 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||| |||| | ||||||||||||| || || |||||||||| | |||||||||||||| |||||| |||||||| | |||||||||||||||    
T  1417479 tttcttataactcattgtaacactttcttcttagtggattggagggatgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 1417573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 4386915 - 4386976
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctccccca 264  Q
    ||||||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  4386915 tttcttgtaacccatttgtatcacttttatcttattggattggagagctgctctctccccca 4386976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 3323679 - 3323755
Alignment:
Q  204 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    ||||||||||| | |||||||||||||||| || |||||||||| |||| |||||| |||| |||||| ||||||||    
T  3323679 tttcttgtaactcattgtaacactttcatcttagtggattggagggctgttctctctcccagattaggtcatattgg 3323755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 39039995 - 39040075
Alignment:
Q  218 ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||||| |||||||||||| || ||||| ||||| |||||| |||||||| | ||||| |||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaa 39040075  T

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Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 47923894 - 47923989
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggct-gaactgggtcaacaa 297  Q
    ||||||||||| |||| ||| ||||||||||||| | ||||| || |||||||||||||| | |||||| |||||||| | |||||||||||||||    
T  47923894 tttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctcccctagattaggtcatattggatcgaactgggtcaacaa 47923989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 22173351 - 22173388
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22173351 acactagtctagggctgttttgttgttgtttgcttgga 22173388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 10207983 - 10207939
Alignment:
Q  253 ctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||    
T  10207983 ctctctcccccagattaggccacattggctgaactgggtcaacaa 10207939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 18656658 - 18656614
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  18656658 tgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 18656614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 38210569 - 38210629
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  38210569 tggattggagagctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 38210629  T

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Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 409
Target Start/End: Complemental strand, 7167173 - 7167134
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttggaaac 409  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  7167173 acactagtctagggctgttttgttgttg-ttgcttggaaac 7167134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 24695152 - 24695247
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| |||| |||||||||||||||||  ||||| ||| | |||||||||||  | |||||| |||||||| | ||||| |||||||||    
T  24695152 tttcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattggaccgaactaggtcaacaa 24695247  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 10274646 - 10274605
Alignment:
Q  33 tcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    ||||||||||||||| ||||| || |||||||||||||||||    
T  10274646 tcttgggttgggaaacacattatattcaccttgggtagtgag 10274605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 21353661 - 21353604
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 260  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| ||||||||||    
T  21353661 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 21353604  T

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Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 3323513 - 3323554
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  3323513 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 3323554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 3328179 - 3328220
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||  |||||||||||| ||||||||||||||||    
T  3328179 tctcttgggttgg--aaaacattgtaaacaccttgggtagtgag 3328220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 4386799 - 4386840
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||||||||||| ||||||||    
T  4386799 tctcttgggttgggaaa--cattgtaatcaccttgagtagtgag 4386840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 26299252 - 26299211
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  26299252 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 26299211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 409
Target Start/End: Original strand, 28504023 - 28504062
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttggaaac 409  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  28504023 acactagtcaagggctgttttgttgttg-ttgcttggaaac 28504062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 47923726 - 47923767
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  47923726 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 47923767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 50494198 - 50494258
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  50494198 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 50494258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 53894119 - 53894055
Alignment:
Q  234 atattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||| |||||||||||||||| | |||| ||  |||| | |||||||||||||||    
T  53894119 atattggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 53894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 5674589 - 5674862
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||||||||| |||||||||    
T  5674589 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttt 5674687  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgtt-cttgtgtaagcttgaaggctattgtttcttgtaaccctttgta 222  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||    
T  5674688 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaagcttgcaagctattgtttcttgtaaccctttgta 5674787  T
Q  223 acactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5674788 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 5674862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 11857154 - 11856979
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  11857154 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 11857056  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857055 gtaacactttc-tcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 11856979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 22010602 - 22010777
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||||||||||||||||| |   | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  22010602 ttttagggttcatattgtgagagtggggaaatatcaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 22010700  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22010701 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 22010777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 31 - 279
Target Start/End: Complemental strand, 22709274 - 22709041
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||| ||||||| | ||||  | ||||||||||| ||  |||||||| ||| ||||||||||||||||    
T  22709274 tctcttgggttgggaaa--cattgtaaacaccttggatagtgag-atttcacca-ttggaaggatcaaaaacttcctcttgtgtcttctcttttagggtt 22709179  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| | |||||| ||||          |||||||||||||    
T  22709178 catattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttc 22709090  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattg 279  Q
    |||||| ||||||||||||||||||||||||||| |||||  |||||||    
T  22709089 atcatagtggattggagagctgctctctcccccagattagatcatattg 22709041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 5757311 - 5757571
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || |||||||   ||| ||||||||| ||||||    
T  5757311 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttccgtgtcttctcttt-agggtt 5757405  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||| | |||| |||| ||||||||||  |||| ||||||||||| |||||||| | ||||||  |||||||||| ||||||||||||||    
T  5757406 cattattgagagagagtggaa-cacaaatgggtagaaattaggtcttgttcttgtataagcttgcaagctatt--ttcttgtaactctttgtaacacttt 5757502  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  5757503 catcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 5757571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 14737482 - 14737656
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| | ||||| ||||||||||||  ||  ||||||||| |||    
T  14737482 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagagt--cttgtaacctttt 14737579  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  14737580 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactggatcaacaa 14737656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 14742342 - 14742516
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| | ||||| ||||||||||||  ||  ||||||||| |||    
T  14742342 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagagt--cttgtaacctttt 14742439  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  14742440 gtaacactttc-tcatattggattggagagctgctctctcccccaaattaggtcatattggctgaactgggtcaacaa 14742516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 28184684 - 28184510
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgt-aagcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||| ||||||||||||||  |  | |||||||| |||    
T  28184684 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggcta--gagtgttgtaacctttt 28184587  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28184586 gtaacactttc-tcatattagattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 28184510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 21356301 - 21356040
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||| |||||  |||||||| |||||||||||||||| | ||||| | ||||||| ||| || ||||||| | ||| ||| ||||| ||||||    
T  21356301 tctcttgggttaggaaa--cattgtaaacaccttgggtagtgag-atttcatca-ttggaagaatcaaaagcttccttttgtgtcttttcttt-agggtt 21356207  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||| | ||||||| ||||||||||  |||| |||||||||||||||||||| | | |||| ||||||||||| ||| ||||||||||    
T  21356206 cattattgagagagtgag-aaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttatt-tttcttgtaactcttagtaacacttt 21356109  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||| ||| |||||| |||||||| | |||||||||||||||    
T  21356108 catcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaa 21356040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 122 - 297
Target Start/End: Original strand, 28155477 - 28155649
Alignment:
Q  122 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttg 220  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||||| ||||||| |||||| ||||||| ||||||| ||||    ||||||||||| ||||    
T  28155477 tttagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctaaa--ttcttgtaaccttttg 28155573  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  28155574 taacactttc-tcatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 28155649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 6438595 - 6438506
Alignment:
Q  206 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  6438595 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaa 6438506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 6005514 - 6005422
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  6005514 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 6005422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 33330433 - 33330525
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  33330433 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 33330525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 16838923 - 16838749
Alignment:
Q  122 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt 219  Q
    ||||||||||||| ||||||  |||| ||| ||  | ||||||| ||||||| |||||| ||||||| |||||||  ||||  | |||||||||| ||||    
T  16838923 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 16838827  T
Q  220 -gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
     ||||||| |||| |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  16838826 tgtaacacattca-catattggattggagagctgctctctcccccagattaagccacattggctgaactgggtcaacaa 16838749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 31086426 - 31086566
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||| ||||||||||||||  | ||||   ||||||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  31086426 atgggtagaaattaggtcttgctcttgtgtaagcttataagcta--atttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctc 31086523  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| | |||||  |||||||| |||||||||||||||||    
T  31086524 tctcccctagattagatcatattggactgaactgggtcaacaa 31086566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 33335930 - 33336022
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||    
T  33335930 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggtcacattggctgaactgggtcaacaa 33336022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 5572076 - 5572334
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | |||| || |||||| |||| || ||||||| | |||  |||||||  ||| ||    
T  5572076 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacta-ttggaatgatcaaaagcttccttttgtgttttctctt--aggatt 5572169  T
Q  131 catattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactt 228  Q
    |||  || ||| ||||| || ||| | ||| ||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | ||||||||||||    
T  5572170 cat--tgagagtgtgggtgacacaaa-atgcgtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacactt 5572264  T
Q  229 tcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||| |||||||||| |||||||||||||| | |||||| |||||||| | ||| |||||||||||    
T  5572265 tcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaattgggtcaacaa 5572334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 10077118 - 10077258
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  ||||||||||  ||| ||||||||||||||||| |||||||||| |||||||    
T  10077118 atgggtagaaattaggtcttgttcttttgtaagcttataagctaat--ttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctc 10077215  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||| |||||||| | ||| |||||||||||    
T  10077216 tctcccccagattaggtcatattggaccgaattgggtcaacaa 10077258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 11857201 - 11857154
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857201 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 11857154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 14737435 - 14737482
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737435 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 14737482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 22010555 - 22010602
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010555 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 22010602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 280
Target Start/End: Complemental strand, 18233096 - 18232867
Alignment:
Q  47 aaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggttcat-attgtgagagtg 145  Q
    ||||||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | |||  |||||||  ||| ||||| |||| ||| |||    
T  18233096 aaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgttttctctt--aggattcattattgagagtgtg 18233001  T
Q  146 gg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggatt 243  Q
    || || ||| | ||||||||||  |||| |||||||||||||||||||  | |||  |  |||||||||| |||| ||||||||||||||||| || |||    
T  18233000 ggtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttataagctgat--ttcttgtaactcttttgtaacactttcatcatagtgaatt 18232904  T
Q  244 ggagagctgctctctcccccatattaggccatattgg 280  Q
    |||| | |||||||||||||| |||||| ||||||||    
T  18232903 ggagggttgctctctcccccagattaggtcatattgg 18232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 4630039 - 4629958
Alignment:
Q  217 tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||| | |||||| |||||||| |||||||| ||||||||    
T  4630039 tttgtaacactttcatcttagtggattggagagctgctctcttccctagattaggtcatattggactgaactgagtcaacaa 4629958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 297
Target Start/End: Complemental strand, 31979762 - 31979517
Alignment:
Q  47 aaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggttcatattgtgagagtgg 146  Q
    ||||||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | |||  |||||||  ||| |||||  || ||| ||||    
T  31979762 aaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgttttctctt--aggattcat--tgagagtgtgg 31979669  T
Q  147 g-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattg 244  Q
    | || ||| | ||||||||||  |||| ||||||||| |||||||||  | | || |  |||||||||| |||| | |||||||||||| || |||||||    
T  31979668 gtgacacaaaaatgggtagaaattaggtcttgttcttttgtaagcttataagttaat--ttcttgtaactcttttgcaacactttcatcttagtggattg 31979571  T
Q  245 gagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||| |||||||||||||||| |||| | |||||||| | |||||||||||||||    
T  31979570 gagggctgctctctcccccagattatgtcatattggaccgaactgggtcaacaa 31979517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 14742295 - 14742342
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14742295 gttgagagtgtctcttgggttgggaaaaacattgtaatcactttgggt 14742342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 204 - 289
Target Start/End: Original strand, 21801342 - 21801429
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgg 289  Q
    ||||||||||| |||| |||||||||| ||| || |||||||||||||||||| |||||||| |||||| |||||||| |||||||||    
T  21801342 tttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggactgaactgg 21801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 22963798 - 22963739
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccc 262  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  22963798 tttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccc 22963739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 23824595 - 23824654
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccc 262  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  23824595 tttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccc 23824654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 11856900 - 11856863
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11856900 acactagtctagggctgttttgttgttgtttgcttgga 11856863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 14737733 - 14737770
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14737733 acactagtctagggctgttttgttgttgtttgcttgga 14737770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 28184433 - 28184396
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28184433 acactagtctagggctgttttgttgttgtttgcttgga 28184396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 5017482 - 5017562
Alignment:
Q  218 ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccata-ttggctgaactgggtcaacaa 297  Q
    ||||||||||||||||||| | |||||||| | |||||||||||| | |||||| |||| ||| | |||||||||||||||    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatttgaccgaactgggtcaacaa 5017562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 28155431 - 28155475
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  28155431 tgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 28155475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 31936671 - 31936591
Alignment:
Q  218 ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||  || |||||||||||||||||||||| |||| | |||| |||||||| | ||||| |||||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaa 31936591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 14742592 - 14742629
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  14742592 acactagtctagggctgttttgttgttgtatgcttgga 14742629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 6438724 - 6438680
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| || |||| ||||||||||||||||||||||||||||||    
T  6438724 tgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 6438680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 5343527 - 5343486
Alignment:
Q  256 tctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||| | ||||||||| ||||||||||||||||||||||    
T  5343527 tctcccctagattaggccacattggctgaactgggtcaacaa 5343486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 12195575 - 12195515
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  12195575 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 12195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 28184734 - 28184684
Alignment:
Q  21 gttgagagtgtctcttgggttggg---aaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||| ||   |||||||| |||||||||||||||    
T  28184734 gttgagagtgtctcttgggtttgggaaaaaaacatagtaatcaccttgggt 28184684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 28955172 - 28955140
Alignment:
Q  234 atattggattggagagctgctctctcccccata 266  Q
    ||||||||||||||||||| |||||||||||||    
T  28955172 atattggattggagagctgatctctcccccata 28955140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 297
Target Start/End: Complemental strand, 31180494 - 31180219
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  31180494 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc 31180395  T
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgt-aagcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||| ||||||||||||||||||||||||||||  | ||||||||||||||| ||| |||||||| ||||||||||||||  |||||||||||||||||    
T  31180394 ttttatggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttg-tcttgtgtaaagcttgaaggctagagtttcttgtaacccttt 31180296  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31180295 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 31180219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 21 - 297
Target Start/End: Complemental strand, 30631687 - 30631411
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtg-aggagttcattagttggaaggatctaaggcttcctctagtgccttct 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  30631687 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtggaggagttcattagttggaaggatctaaagcttcctctagtgacttct 30631588  T
Q  120 cttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctt 218  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||||| || |||||| ||||||| ||||||||||||  ||||||||||||||||    
T  30631587 cttt-agggttcatattgtgagagtggggaaacaccaaagggtagaatctatggtttgttcatgtgtaaagcttgaaggctagagtttcttgtaaccctt 30631489  T
Q  219 tgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  30631488 tgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccacattggctgaactgagtcaacaa 30631411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 27 - 297
Target Start/End: Complemental strand, 24136121 - 24135853
Alignment:
Q  27 agtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttag 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||||||||| ||||||||||||    
T  24136121 agtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttttag 24136023  T
Q  127 ggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacac 226  Q
    |||||| |||||||||||||||||||||  | |||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||    
T  24136022 ggttcacattgtgagagtggggaaacaccaaagggtagaatctaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacac 24135924  T
Q  227 tttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||| || || |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24135923 tttcatcttagtgcattggatagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 24135853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 38219666 - 38219403
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  38219666 tctcttgggttgggaaaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggtt 38219569  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  38219568 catattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttc 38219470  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38219469 atcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 38219403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 24 - 297
Target Start/End: Complemental strand, 35387937 - 35387667
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| | ||||  | ||||||||||||||  |||||||||||| |||||||||    
T  35387937 gagagggtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag-atttcacca-ttggaaggatctaaaacttcctctagtgtcttctcttt 35387840  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||||| | |||||| ||||||||||||||||||||    
T  35387839 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttattcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaa 35387741  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  35387740 cactttcatcatagtagattggagagctgctctctcccccagattaggccatattggctgaattgggtcaacaa 35387667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 105 - 297
Target Start/End: Complemental strand, 38192369 - 38192178
Alignment:
Q  105 cctctagtgccttctcttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgt 204  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| | |||||| |    
T  38192369 cctcttgtgtcttctcttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-t 38192271  T
Q  205 ttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38192270 ttcttgtaaccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 38192178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 15464798 - 15464536
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  ||| |||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||||||||||    
T  15464798 tctcttgggttgggaaa--catcgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttttagggtt 15464703  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||||||||||||| ||||||| ||||||||||  |||| |||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||    
T  15464702 cattattgtgagagtggg-aaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaactctttgtaacacttt 15464605  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||| |||||  |||||||| | |||||||||||||||    
T  15464604 catcatagtggattggagagctgctctctcccccagattagatcatattggaccgaactgggtcaacaa 15464536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 1457067 - 1457242
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  1457067 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 1457165  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  1457166 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 1457242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 36932181 - 36932443
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||||| ||| ||||| ||||||||||    
T  36932181 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttcctcttgtgtcttctgttttagggtt 36932276  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||  || | ||||||||| ||||| |||| | |||||| ||||||||||| ||||||||||||||    
T  36932277 cattattgagagagtggg-aaacacaaatgggtagaaattaagtcttgttcttatgtaaacttgcaagctatt-tttcttgtaactctttgtaacacttt 36932374  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  36932375 catcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 36932443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 43592459 - 43592284
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  43592459 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 43592361  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43592360 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 43592284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 27449994 - 27449819
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  27449994 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 27449896  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  27449895 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggctatattggctgaactgggtcaacaa 27449819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 9353165 - 9353425
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| ||| ||    
T  9353165 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctctttaagg-tt 9353259  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||  |||  |||||||||||||||||||| | ||| ||  |||||||||| ||||||||||||||    
T  9353260 cattattgagagagtggg-aaacacaaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctttt--ttcttgtaactctttgtaacacttt 9353356  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  9353357 catcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 9353425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 15044865 - 15044691
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  15044865 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 15044768  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15044767 gtaacactttc-tcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 15044691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 27445150 - 27444975
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  27445150 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 27445052  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  27445051 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggctatattgcctgaactgggtcaacaa 27444975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 121 - 289
Target Start/End: Complemental strand, 43598904 - 43598737
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  43598904 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 43598806  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgg 289  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43598805 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgg 43598737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 121 - 289
Target Start/End: Complemental strand, 43604396 - 43604229
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  43604396 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 43604298  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgg 289  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43604297 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgg 43604229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 121 - 289
Target Start/End: Complemental strand, 43609888 - 43609721
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  43609888 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 43609790  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgg 289  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43609789 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgg 43609721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 14520494 - 14520234
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||| ||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| ||||||    
T  14520494 tctcttgggttgggaaa--cattgtaaacaccttggatagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt-agggtt 14520400  T
Q  131 cata-ttgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    |||| ||| ||||||||| || |||| ||||||||||  |||| |||||||||||||||||||| | ||||||  |||||||||| ||||||||||||||    
T  14520399 cataattgagagagtgggtaa-cacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacacttt 14520303  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||| |||||||||||| |||| | |||||| |||||||| | |||||||||||||||    
T  14520302 catcatagtggattgaagagctgctctcccccctagattaggtcatattggaccgaactgggtcaacaa 14520234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 11916805 - 11917065
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| ||  |||||| | |||  |||||||  ||||||    
T  11916805 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaaacttccttttgtgttttctctt--agggtt 11916898  T
Q  131 catattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactt 228  Q
    |||  | |||||||||| || ||| | ||||||||||  |||| |||||||||||||||||||| |  |||||  |||||||||| |||| |||||||||    
T  11916899 catcgtttgagagtgggtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgcaaactatt--ttcttgtaactcttttgtaacactt 11916995  T
Q  229 tcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||| ||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  11916996 tcattatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaa 11917065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 126 - 297
Target Start/End: Original strand, 28807485 - 28807652
Alignment:
Q  126 gggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgtaac 224  Q
    ||||||||| |||||||||||| ||| ||  | ||||||| ||||||| |||||| ||||||| ||||||| ||||  | ||||||||||| ||||||||    
T  28807485 gggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagcta--gattcttgtaaccttttgtaac 28807581  T
Q  225 actttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||| || |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  28807582 actt-ca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 28807652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 123 - 297
Target Start/End: Original strand, 12084096 - 12084268
Alignment:
Q  123 ttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgta 222  Q
    ||||| |||||||||||||||||||  | |||| ||||||||||  |||| |||||||||||||||||||  | | || |  |||||||||| |||||||    
T  12084096 ttaggattcatattgtgagagtgggtga-cacaaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaat--ttcttgtaactctttgta 12084192  T
Q  223 acactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| |||| ||| | |||||||||||||||    
T  12084193 acactttcatcatagtggattggagagctgctctctgccccatattaggtcatagtggaccgaactgggtcaacaa 12084268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 123 - 297
Target Start/End: Complemental strand, 10281929 - 10281755
Alignment:
Q  123 ttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-g 220  Q
    ||||| ||||||||||||| ||||| || ||| | ||||||||||  |||| |||||||||||||||||||| | |||| |  |||||||||| |||| |    
T  10281929 ttaggattcatattgtgagtgtgggtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactcttttg 10281833  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| | |||||||||||||||    
T  10281832 taacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattggaccgaactgggtcaacaa 10281755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 37556613 - 37556702
Alignment:
Q  207 cttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  37556613 cttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 37556702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 37561435 - 37561524
Alignment:
Q  207 cttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  37561435 cttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 37561524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 31401838 - 31401930
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31401838 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccatattaggccacattggctgaactgggtcaacaa 31401930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 2785472 - 2785380
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  2785472 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 2785380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 31396981 - 31397073
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  31396981 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 31397073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 280
Target Start/End: Complemental strand, 3880476 - 3880321
Alignment:
Q  124 tagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gt 221  Q
    |||| ||||||||||||||||||| || ||| | ||||||||||  |||| |||||||||||||||||||| |  ||| |  |||||||||| |||| ||    
T  3880476 taggattcatattgtgagagtgggtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaat--ttcttgtaactcttttgt 3880380  T
Q  222 aacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 280  Q
    ||||||||||||||| ||||||||||||||||||||| || || |||||| ||||||||    
T  3880379 aacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattgg 3880321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 33768276 - 33768184
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  33768276 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctcccccccagattaggccacattggctgaactgggtcaacaa 33768184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 33791413 - 33791321
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  33791413 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctttcccccagattaggccacattggctgaactgggtcaacaa 33791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 17003792 - 17004053
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaag-gcttcctctagtgccttctcttttagggt 129  Q
    ||||||||||| |||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| ||  ||||||| | |||  |||||||  ||| |    
T  17003792 tctcttgggtttggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaaagcttccttttgtgttttctctt--aggat 17003885  T
Q  130 tcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactt 228  Q
    |||||||||||||||| |  ||   | ||||||||||  |||| |||||||||||||||||||| | | || | |||  |||||| |||| | || ||||    
T  17003886 tcatattgtgagagtgagtgaaattaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagttaattttt--tgtaactcttttgaaatactt 17003983  T
Q  229 tcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||| ||||||| ||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  17003984 tcatcatagtggattgaagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 17004053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 28832357 - 28832263
Alignment:
Q  204 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| | |||||||||||||||| || |||||||||| |||||||||||||||| |||||| |||||||| | |||| ||||||||||    
T  28832357 tttcttgtaactcattgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtcaacaa 28832263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 42127364 - 42127503
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 256  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  |||||||||| | |||||||||||||||| || |||||||| | ||||||||    
T  42127364 atgggtagaaagtaggacttgttcttttgtaagcttataagctaat--ttcttgtaactcattgtaacactttcatcttagtggattggggggctgctct 42127461  T
Q  257 ctcccccatattaggccatattggct-gaactgggtcaacaa 297  Q
    |||||||| |||||| |||||| | | |||||||||||||||    
T  42127462 ctcccccagattaggtcatattagatcgaactgggtcaacaa 42127503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 31300549 - 31300689
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 256  Q
    ||||||||||  |||| |||||||||||||||||||| |  ||||| ||||||| ||| | || ||||||||||||| || |||||||||||| | ||||    
T  31300549 atgggtagaaattaggacttgttcttgtgtaagcttgcaaactatt-tttcttgcaactcattataacactttcatcttagtggattggagagtttctct 31300647  T
Q  257 ctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||| || | |||| |||||||| | |||||||||||||||    
T  31300648 ctccctcagactaggtcatattggaccgaactgggtcaacaa 31300689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 1457020 - 1457067
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457020 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 1457067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 27445197 - 27445150
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445197 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 27445150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 27450041 - 27449994
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450041 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 27449994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 43592506 - 43592459
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592506 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 43592459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 43598951 - 43598904
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43598951 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 43598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 43604443 - 43604396
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604443 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 43604396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 43609935 - 43609888
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609935 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 43609888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 297
Target Start/End: Complemental strand, 19588888 - 19588750
Alignment:
Q  159 gggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctc 257  Q
    ||||||||  |||| |||||||||||||||||||  | | || |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||||    
T  19588888 gggtagaaattaggtcttgttcttgtgtaagcttataaggtaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctc 19588791  T
Q  258 tcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||  | |||||  |||||||| | |||||||||||||||    
T  19588790 tccctaagattagttcatattggaccgaactgggtcaacaa 19588750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 15044913 - 15044865
Alignment:
Q  21 gttgagagtgtctcttgggtt-gggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15044913 gttgagagtgtctcttgggtttgggaaaaacattgtaatcaccttgggt 15044865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 24135780 - 24135743
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24135780 acactagtctagggctgttttgttgttgtttgcttgga 24135743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 28807435 - 28807479
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  28807435 tgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 28807479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 24553506 - 24553599
Alignment:
Q  204 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| | |||||||||||||||| || |||| ||||| |||||||||||||  | |||||| |||||||| | ||||||| |||||||    
T  24553506 tttcttgtaactcattgtaacactttcatcttagtggagtggag-gctgctctctcccatagattaggtcatattggaccgaactggatcaacaa 24553599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 1457318 - 1457355
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  1457318 acactagtctagggctgctttgttgttgtttgcttgga 1457355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 7160912 - 7160977
Alignment:
Q  214 ccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattg 279  Q
    ||||||||| ||||||||||  | ||||||||||||||| ||||||||| ||| |||| |||||||    
T  7160912 ccctttgtatcactttcatctgagtggattggagagctgatctctcccctatagtaggtcatattg 7160977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 43592207 - 43592170
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43592207 acactagtctagggctgctttgttgttgtttgcttgga 43592170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 43598652 - 43598615
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43598652 acactagtctagggctgctttgttgttgtttgcttgga 43598615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 43604144 - 43604107
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43604144 acactagtctagggctgctttgttgttgtttgcttgga 43604107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 43609636 - 43609599
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43609636 acactagtctagggctgctttgttgttgtttgcttgga 43609599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 4410241 - 4410301
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  4410241 tggattggagagctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 4410301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 2630326 - 2630272
Alignment:
Q  208 ttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctccc 261  Q
    |||||||||||| ||| ||||||||||||| ||||||| ||||||||| ||||||    
T  2630326 ttgtaacccttttgtatcactttcatcatagtggattgaagagctgctatctccc 2630272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 6741951 - 6741890
Alignment:
Q  204 tttcttgtaacc-ctttgtaacactttcatcatattggattggagagctgctctctccccca 264  Q
    |||||||||||  ||||||| ||||| |||| || ||||||||||||||||||| |||||||    
T  6741951 tttcttgtaacttctttgtatcacttccatcttaatggattggagagctgctctatccccca 6741890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 15044615 - 15044586
Alignment:
Q  369 acactagtctagggctgttttgttgttgtt 398  Q
    ||||||||||||||||||||||||||||||    
T  15044615 acactagtctagggctgttttgttgttgtt 15044586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 27444898 - 27444861
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  27444898 acactagtctagggctgctatgttgttgtttgcttgga 27444861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 27449742 - 27449705
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  27449742 acactagtctagggctgctatgttgttgtttgcttgga 27449705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 30631335 - 30631306
Alignment:
Q  369 acactagtctagggctgttttgttgttgtt 398  Q
    ||||||||||||||||||||||||||||||    
T  30631335 acactagtctagggctgttttgttgttgtt 30631306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 33030938 - 33030999
Alignment:
Q  204 tttcttgtaaccct-ttgtaacactttcatcatattggattggagagctgctctctccccca 264  Q
    |||||||||||||  ||| | |||||||||| || || ||||||||||||||||||||||||    
T  33030938 tttcttgtaaccccattgcatcactttcatcttagtgaattggagagctgctctctccccca 33030999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 11181830 - 11181890
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctccccc 263  Q
    ||||||||||| | |||||| |||||||||| || |||||||||| | |||||||||||||    
T  11181830 tttcttgtaactcatttgtatcactttcatcttagtggattggagggttgctctctccccc 11181890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 15552464 - 15552524
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  15552464 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15552524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 24553360 - 24553401
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  24553360 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 24553401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 28832521 - 28832480
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  28832521 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 28832480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 31179431 - 31179371
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  31179431 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31179371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 31542953 - 31543013
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  31542953 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31543013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 31545299 - 31545359
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  31545299 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31545359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 297
Target Start/End: Original strand, 24787180 - 24787456
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctc 120  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  24787180 gttgagagtgtctcttgggttgggaaaaacattataatcaccttgggcagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc 24787279  T
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||||||||||||| |||||||||  | ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  24787280 ttttagggttcatattgtgagagttgggaaacaccaaagggtagaatctaggatttgttcttgtgtaatgcttgaaggctattgtttcttgtaacccttt 24787379  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  24787380 gtaacactttc-tcatattggattggagagctgctctcccccccagattaggccatattggctgaactgggtcaacaa 24787456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 24 - 297
Target Start/End: Original strand, 24202591 - 24202861
Alignment:
Q  24 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||  | |||||||||||||| ||||||||||||| |||||||||    
T  24202591 gagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag-atctcacca-ttggaaggatctaaagcttcctctagtgtcttctcttt 24202688  T
Q  124 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaa 223  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  24202689 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaa 24202787  T
Q  224 cactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24202788 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 24202861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 19358677 - 19358935
Alignment:
Q  35 ttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggttcata 134  Q
    |||||||||||||| |||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  19358677 ttgggttgggaaaa-cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcata 19358773  T
Q  135 ttgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatca 234  Q
    ||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||    
T  19358774 ttgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatca 19358872  T
Q  235 tattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    || |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19358873 tagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaa 19358935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 19361262 - 19361524
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||| |||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  19361262 tctcttgggttgggaaaa-cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggtt 19361358  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||    
T  19361359 catattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaaactatt-tttcttgtaaccctttgtaacactttc 19361457  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19361458 atcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaa 19361524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 46 - 297
Target Start/End: Original strand, 19379916 - 19380164
Alignment:
Q  46 aaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggttcatattgtgagagtg 145  Q
    |||||||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||    
T  19379916 aaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgagagagtg 19380013  T
Q  146 gggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattgg 245  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  19380014 gggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaaactatt-tttcttgtaaccctttgtaacactttcatcatagtggattgg 19380112  T
Q  246 agagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19380113 agagctgctctctcccccatattaggtcatattgactgaactgggtcaacaa 19380164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 31 - 279
Target Start/End: Original strand, 13604455 - 13604697
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| ||||||    
T  13604455 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt-agggtt 13604549  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||  |||| |||||||||||||||| ||| | |||||| ||||||||||| |||||||||| |||    
T  13604550 cattattgagagagtggg-aaacacaaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatt-tttcttgtaactctttgtaacatttt 13604647  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattg 279  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13604648 catcatagtggattggagagctgctctctcccccatattaggtcatattg 13604697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 31 - 294
Target Start/End: Complemental strand, 3281971 - 3281715
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||  ||||||    
T  3281971 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctctt--agggtt 3281878  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||  |||| |||||||||||||||||||| | ||||||  |||||||||| ||||||||||||||    
T  3281877 catcattgagagagtggg-aaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacacttt 3281781  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaa 294  Q
    ||||||  ||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||    
T  3281780 catcatcgtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaa 3281715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 19366137 - 19366297
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  19366137 tctcttgggttgggaaaaatattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggtt 19366234  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttg 193  Q
    ||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  19366235 catattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttg 19366297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 26644735 - 26644990
Alignment:
Q  35 ttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggttcat- 133  Q
    |||||||||||||  |||||||| ||||||| |||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||  |||||||||     
T  26644735 ttgggttgggaaa--cattgtaaacaccttgagtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctctt--agggttcatc 26644828  T
Q  134 attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatc 233  Q
    |||| ||||||| | ||||||| ||||||||||  |||| |||||||||||||||||||| | ||||||  |||||||||| ||||||||||||||||||    
T  26644829 attgagagagtgag-aaacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacactttcatc 26644925  T
Q  234 atattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  26644926 ataatggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 26644990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 41390760 - 41390586
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||  ||||||||| |||    
T  41390760 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt--cttgtaacctttt 41390663  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  41390662 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgatctgggtcaacaa 41390586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 41398415 - 41398241
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||  ||||||||| |||    
T  41398415 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt--cttgtaacctttt 41398318  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  41398317 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgacctgggtcaacaa 41398241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 122 - 297
Target Start/End: Original strand, 25444996 - 25445169
Alignment:
Q  122 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttga-aggctattgtttcttgtaacccttt 219  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||||  ||||||| |||||| ||||||| |||||| | ||||  ||  ||||||||| |||    
T  25444996 tttagggttcatagtgtgagagtgggaaaataccaaagggtagc-tctagggtttgttcatgtgtaaagcttgataagctagagt--cttgtaacctttt 25445092  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25445093 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 25445169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 123 - 297
Target Start/End: Original strand, 47703855 - 47704029
Alignment:
Q  123 ttagggttcatattgtgagagtggg-gaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-g 220  Q
    ||||| ||||||||||||||||||| || ||| | ||||||||||  |||| |||||||||||||||||||| | |||| |  |||||||||  |||| |    
T  47703855 ttaggattcatattgtgagagtgggtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaattcttttg 47703951  T
Q  221 taacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  47703952 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 47704029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 37070031 - 37069774
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||| || |||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| | ||||    
T  37070031 tctcttgggttgggaaa--cattgtaaacaccttggataatgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt-atggtt 37069937  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| | ||||||| || |||| ||||||||||  |||| |||||||||||||||||||| |  |||||     ||||||| ||||||||||||||    
T  37069936 cattattgagtgagtgggtaa-cacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactatt-----ttgtaactctttgtaacacttt 37069843  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||| |||||| |||||||||||||| |||||| |||||||| | |||||||||||||||    
T  37069842 catcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 37069774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 46 - 271
Target Start/End: Original strand, 21536416 - 21536635
Alignment:
Q  46 aaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggttcat-attgtgagagt 144  Q
    |||||||||||| ||||||||||||| || | ||||  | ||||||||||| || ||||||| | ||| ||||||||  ||||||||| |||| ||||||    
T  21536416 aaaacattgtaaacaccttgggtagtaag-atttcacca-ttggaaggatcgaaagcttccttttgtgtcttctctt--agggttcatcattgagagagt 21536511  T
Q  145 ggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattg 244  Q
    ||| || |||| | ||||||||  || |  ||||||||||||||||||| | ||||||  |||||||||| ||||||||||||||||| ||| |||||||    
T  21536512 gggtaa-cacaaacgggtagaaattaagtattgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacactttcattatagtggattg 21536608  T
Q  245 gagagctgctctctcccccatattagg 271  Q
    |||||||||||||||||||| ||||||    
T  21536609 gagagctgctctctcccccagattagg 21536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 39445594 - 39445505
Alignment:
Q  206 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39445594 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 39445505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 44023864 - 44023953
Alignment:
Q  206 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44023864 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 44023953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 1055002 - 1055091
Alignment:
Q  206 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||| || ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  1055002 tcttgtaaccttttgtaacactt-ca-catattggattggagagttgctctctcccccagattaggccatattggctgaactgggtcaacaa 1055091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 157 - 280
Target Start/End: Complemental strand, 32889583 - 32889461
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 256  Q
    ||||||||||  |||| |||||||||||||||||||| | |||||| ||||||||||| | |||||||||||||||| || |||||||||||||||||||    
T  32889583 atgggtagaaattaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaactcattgtaacactttcatcttagtggattggagagctgctct 32889485  T
Q  257 ctcccccatattaggccatattgg 280  Q
     ||||||| | |||| ||||||||    
T  32889484 atcccccagactaggtcatattgg 32889461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 43988452 - 43988544
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  43988452 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtaaacaa 43988544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 9476393 - 9476265
Alignment:
Q  169 tagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatat 267  Q
    |||| |||||||||||||||||||| | |||| |  ||||| |||| |||| |||| |||||||||||| ||||||||||||||||||||||||| | ||    
T  9476393 taggtcttgttcttgtgtaagcttgtaagctaat--ttcttataactcttttgtaatactttcatcatagtggattggagagctgctctctcccctagat 9476296  T
Q  268 taggccatattgg-ctgaactgggtcaacaa 297  Q
    |||| |||||||| | |||||||||||||||    
T  9476295 taggtcatattggaccgaactgggtcaacaa 9476265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 16124469 - 16124609
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  16124469 atgggtagaaattaggtcttgttcttatgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 16124566  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||| |||||| |||||||| | |||||| ||||||||    
T  16124567 tctcccccagattaggtcatattggaccgaactgagtcaacaa 16124609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 19073027 - 19072932
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| |||| |||||||||||||| || ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  19073027 tttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 19072932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 19120917 - 19120822
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| |||| |||||||||||||| || ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  19120917 tttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 19120822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 47098778 - 47098917
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctct 256  Q
    ||||||||||  |||| ||||||||| |||||||||  | |||| |  |||||||||| | |||||||||||||||| || |||||||||| ||||||||    
T  47098778 atgggtagaaattaggacttgttcttttgtaagcttataagctaat--ttcttgtaactcattgtaacactttcatcttagtggattggagggctgctct 47098875  T
Q  257 ctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||| ||| || |||||||| | |||||||||||||||    
T  47098876 ctcccccagattcggtcatattggaccgaactgggtcaacaa 47098917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 294
Target Start/End: Complemental strand, 29651955 - 29651818
Alignment:
Q  157 atgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 255  Q
    ||||||||||  |||| |||||||||||||||||||  | | || |  |||||||||  |||| ||||||||||||||||| |||||||||| |||||||    
T  29651955 atgggtagaaattaggtcttgttcttgtgtaagcttataagttaat--ttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgctc 29651858  T
Q  256 tctcccccatattaggccatattgg-ctgaactgggtcaa 294  Q
    ||||||||| |||||| |||||||| | ||||||||||||    
T  29651857 tctcccccagattaggtcatattggaccgaactgggtcaa 29651818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 27104370 - 27104465
Alignment:
Q  204 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||| | |||||| ||||||||    
T  27104370 tttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtcaacaa 27104465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 297
Target Start/End: Complemental strand, 13598525 - 13598402
Alignment:
Q  174 cttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggc 272  Q
    |||||||||||||||||||  | ||||   ||||||||| | | |||||||||||||||||||| ||||||| || |||||||||||||||| ||||||     
T  13598525 cttgttcttgtgtaagcttataagcta--atttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggt 13598428  T
Q  273 catattgg-ctgaactgggtcaacaa 297  Q
    |||||||| | |||||||||||||||    
T  13598427 catattggaccgaactgggtcaacaa 13598402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 41390807 - 41390760
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41390807 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 41390760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 41398462 - 41398415
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41398462 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 41398415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 775757 - 775676
Alignment:
Q  217 tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||| |||||| |||||||| | ||| |||||||||||    
T  775757 tttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaa 775676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 47102840 - 47102934
Alignment:
Q  204 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||||||| | |||||||| ||||||| || |||||||||  |||||||||||||| | |||||| |||||||| | |||||||||||||||    
T  47102840 tttcttgtaactcattgtaacattttcatcttagtggattggatggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaa 47102934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 24202933 - 24202970
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    |||||||| |||||||||||||||||||||||||||||    
T  24202933 acactagtttagggctgttttgttgttgtttgcttgga 24202970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 1054873 - 1054917
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| || |||| ||||||||||||||||||||||||||||||    
T  1054873 tgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 1054917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 25439757 - 25439801
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| || |||| ||||||||||||||||||||||||||||||    
T  25439757 tgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 25439801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 25444950 - 25444994
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| || |||| ||||||||||||||||||||||||||||||    
T  25444950 tgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 25444994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 39445723 - 39445679
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| || |||| ||||||||||||||||||||||||||||||    
T  39445723 tgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 39445679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 44023735 - 44023779
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| || |||| ||||||||||||||||||||||||||||||    
T  44023735 tgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 44023779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 48382479 - 48382524
Alignment:
Q  204 tttcttgtaaccc-tttgtaacactttcatcatattggattggaga 248  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||    
T  48382479 tttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 9459479 - 9459419
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  9459479 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9459419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 9463306 - 9463246
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  9463306 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9463246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 16226386 - 16226446
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  16226386 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16226446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 47102672 - 47102713
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 74  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  47102672 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 47102713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 17781 - 18044
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  17781 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggtt 17878  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||| ||| | |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  17879 catattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttc 17977  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17978 atcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 18044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 23874 - 24137
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||  | |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  23874 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggtt 23971  T
Q  131 catattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc 230  Q
    ||||||||||||||||||||||||| |||||||||| ||| | |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  23972 catattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttc 24070  T
Q  231 atcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24071 atcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 24137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 8250 - 8512
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||  || ||||||| | ||| ||||||||||||||||    
T  8250 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggattaaaagcttccttttgtgtcttctcttttagggtt 8345  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||  ||||||  |||| |||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||    
T  8346 cattattgagagagtggg-aaacacaaatacgtagaaattaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaactctttgtaacacttt 8443  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||    
T  8444 catcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaa 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 31 - 279
Target Start/End: Original strand, 133112 - 133354
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| ||||||    
T  133112 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt-agggtt 133206  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||  |||| |||||||||||||||| ||| | |||||| ||||||||||| |||||||||| |||    
T  133207 cattattgagagagtggg-aaacacaaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatt-tttcttgtaactctttgtaacatttt 133304  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattg 279  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  133305 catcatagtggattggagagctgctctctcccccatattaggtcatattg 133354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 297
Target Start/End: Complemental strand, 5810 - 5687
Alignment:
Q  174 cttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggc 272  Q
    |||||||||||||||||||  | ||||   ||||||||| | | |||||||||||||||||||| ||||||| || |||||||||||||||| ||||||     
T  5810 cttgttcttgtgtaagcttataagcta--atttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggt 5713  T
Q  273 catattgg-ctgaactgggtcaacaa 297  Q
    |||||||| | |||||||||||||||    
T  5712 catattggaccgaactgggtcaacaa 5687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 2577 - 2496
Alignment:
Q  217 tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||| |||||| ||||||||   |||||||||||||||    
T  2577 tttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattggagcgaactgggtcaacaa 2496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 102; Significance: 2e-50; HSPs: 3)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 34967 - 35142
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||||||||||  | ||||||| ||||||| |||||| ||||||| ||||||||||||  ||| ||| ||||| |||    
T  34967 ttttagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttctaacctttt 35065  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  35066 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggttaacaa 35142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 34920 - 34967
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||    
T  34920 gttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggt 34967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 35218 - 35255
Alignment:
Q  369 acactagtctagggctgttttgttgttgtttgcttgga 406  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35218 acactagtctagggctgttttgttgttgtttgcttgga 35255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 95; Significance: 3e-46; HSPs: 4)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 9549 - 9722
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 219  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||| ||||||| |||||| ||||||| ||||||||||||  ||  ||||||||| |||    
T  9549 ttttagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaggctagagt--cttgtaacctttt 9645  T
Q  220 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9646 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 9722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 3707 - 3754
Alignment:
Q  21 gttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  3707 gttgagagtgtctcttaggttaggaaaaacattgtaatcaccttgggt 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 3754 - 3833
Alignment:
Q  121 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgt-aagcttgaaggcta 200  Q
    |||||||||||||| |||||||||||| ||| ||  | |||||| |||||||| |||||| ||||| ||||||||||||||    
T  3754 ttttagggttcatagtgtgagagtgggaaaataccaaagggtag-atctagggtttgttcatgtgtaaagcttgaaggcta 3833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 9514 - 9549
Alignment:
Q  33 tcttgggttgggaaaaacattgtaatcaccttgggt 68  Q
    |||| |||||||||||||||||||||||||||||||    
T  9514 tcttaggttgggaaaaacattgtaatcaccttgggt 9549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 36665 - 36925
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||  |||||||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| ||||||    
T  36665 tctcttgggttgg--aaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt-agggtt 36759  T
Q  131 cat-attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||| |||| ||||||||| ||||||| ||||||||||   | | |||||||||||||||||||| | ||||||  |||||||||| ||||||||||||||    
T  36760 cattattgagagagtggg-aaacacaaatgggtagaaatcatgtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacacttt 36856  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||| ||| |||| |||||||||||| ||| | |||||| |||||||| | |||||||||||||||    
T  36857 catcatagtgggttggcgagctgctctcttccctagattaggtcatattggaccgaactgggtcaacaa 36925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 35 - 297
Target Start/End: Original strand, 43798 - 44054
Alignment:
Q  35 ttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggttcat- 133  Q
    |||||||||||||  |||||||| |||||||||||||||| | ||||  | ||||||||||| || ||||||| | ||| ||||||||| |||||||||     
T  43798 ttgggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt-agggttcatt 43892  T
Q  134 attgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatc 233  Q
    |||| ||||| | |||| |||| ||||||||||  |||| ||||||||||| |||||||| | ||||||  |||||||||| ||||||||||||||||||    
T  43893 attgagagagagtggaa-cacaaatgggtagaaattaggtcttgttcttgtataagcttgcaagctatt--ttcttgtaactctttgtaacactttcatc 43989  T
Q  234 atattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||| ||||||||||||||||||||||||||| | |||  |||||||| | |||||||||||||||    
T  43990 atagtggattggagagctgctctctcccccagaatagatcatattggaccgaactgggtcaacaa 44054  T

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Target: scaffold0036 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 85947 - 85687
Alignment:
Q  31 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaggcttcctctagtgccttctcttttagggtt 130  Q
    |||||||||||||||||  |||||||| ||| |||||||||||| | ||||  | ||||||||||| ||  |||||| | |||  || ||| ||||  ||    
T  85947 tctcttgggttgggaaa--cattgtaaacactttgggtagtgag-atttcacca-ttggaaggatcaaaaacttccttttgtgtttt-tctcttagaatt 85853  T
Q  131 catattgtgagagtggggaaacacata-tgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacacttt 229  Q
    ||||||||| ||||||| | ||||| | |||||||||  |||| |||| ||||||||||||||  | ||||   ||||||||||| ||||||||||||||    
T  85852 catattgtgggagtggg-agacacaaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagcta--atttcttgtaactctttgtaacacttt 85756  T
Q  230 catcatattggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    ||||||  ||||||||||||| ||||||||||||| |||||| |||||||| |||||||||||||||||    
T  85755 catcatggtggattggagagccgctctctcccccagattaggtcatattggactgaactgggtcaacaa 85687  T

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Target: scaffold0464 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 457 - 368
Alignment:
Q  206 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  457 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaa 368  T

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Target: scaffold0464; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 586 - 542
Alignment:
Q  23 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 67  Q
    |||||| || |||| ||||||||||||||||||||||||||||||    
T  586 tgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 14297 - 14389
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  14297 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 14389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 19153 - 19245
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| |||||||  ||| ||||||| |||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  19153 ttcttgtaactcttttgtaacacactca-catattgtattggagagctgctctctcccccagattaggccacaatggctgaactgggtcaacaa 19245  T

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Target: scaffold0259 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 2239 - 2331
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||    
T  2239 ttcttgtaactcttttgtaacacattca-catattggattggagagctactctctcccccagattaggccacattggctgaactgggtcaacaa 2331  T

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Target: scaffold0028 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 148944 - 149036
Alignment:
Q  205 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||| |||| ||||||| |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||    
T  148944 ttcttgtaactcttttgtaacacattca-catattggattggagagctactctctcccccagattaggccacattggctgaactgggtcaacaa 149036  T

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Target: scaffold0148 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 10861 - 10736
Alignment:
Q  169 tagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatat 267  Q
    |||| |||||||||||||||||||| |  ||| |  |||||||||| |||| |||||||||||||| || ||||||||||||||||||||||||||| ||    
T  10861 taggtcttgttcttgtgtaagcttgtaaactaat--ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaat 10764  T
Q  268 taggccatattgg-ctgaactgggtcaa 294  Q
    |||| |||||||| | ||||||||||||    
T  10763 taggtcatattggaccgaactgggtcaa 10736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 181980 - 182044
Alignment:
Q  233 catattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaa 297  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  181980 catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaa 182044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 160 - 297
Target Start/End: Complemental strand, 17404 - 17267
Alignment:
Q  160 ggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctctct 258  Q
    |||||||  |||| |||||||||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||||||| | ||||||||    
T  17404 ggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacactttcatcataatggattggagggttgctctct 17307  T
Q  259 cccccatattaggccatattg-gctgaactgggtcaacaa 297  Q
      ||||||||||| |||||||  | |||||||||||||||    
T  17306 ttcccatattaggtcatattgaaccgaactgggtcaacaa 17267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 45337 - 45276
Alignment:
Q  218 ttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattg 279  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  45337 ttgtaacgctttcatcatagtggattggagagctgctctctcccccagattaggtcatattg 45276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 269 - 329
Alignment:
Q  238 tggattggagagctgctctctcccccatattaggccatattgg-ctgaactgggtcaacaa 297  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  269 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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