View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1286_low_2 (Length: 458)

Name: NF1286_low_2
Description: NF1286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1286_low_2
NF1286_low_2
[»] chr5 (67 HSPs)
chr5 (199-442)||(13592565-13592819)
chr5 (199-325)||(23648713-23648839)
chr5 (199-325)||(23809733-23809859)
chr5 (247-335)||(29616190-29616278)
chr5 (199-323)||(19241605-19241728)
chr5 (199-322)||(42318182-42318305)
chr5 (30-105)||(13592403-13592478)
chr5 (30-104)||(23648549-23648623)
chr5 (30-104)||(23809949-23810023)
chr5 (199-319)||(31008053-31008173)
chr5 (199-335)||(36572052-36572188)
chr5 (199-335)||(30644688-30644826)
chr5 (200-326)||(34529066-34529192)
chr5 (201-332)||(42804440-42804559)
chr5 (199-346)||(4219068-4219205)
chr5 (199-335)||(27405837-27405962)
chr5 (199-346)||(25670460-25670595)
chr5 (199-283)||(4938427-4938511)
chr5 (199-335)||(27945916-27946041)
chr5 (34-102)||(31007887-31007955)
chr5 (285-335)||(32973114-32973164)
chr5 (285-335)||(40892086-40892136)
chr5 (199-236)||(3455211-3455248)
chr5 (199-236)||(4580392-4580429)
chr5 (285-346)||(23089817-23089878)
chr5 (199-236)||(31011730-31011767)
chr5 (293-346)||(32363193-32363246)
chr5 (199-236)||(32973038-32973075)
chr5 (293-346)||(39008791-39008844)
chr5 (205-346)||(39238828-39238958)
chr5 (199-236)||(40892175-40892212)
chr5 (34-102)||(7651492-7651560)
chr5 (247-326)||(27407473-27407552)
chr5 (199-233)||(7651359-7651393)
chr5 (396-442)||(23648910-23648956)
chr5 (396-442)||(23809616-23809662)
chr5 (293-346)||(3455113-3455166)
chr5 (248-309)||(8681015-8681076)
chr5 (199-236)||(9958067-9958104)
chr5 (285-346)||(13479322-13479383)
chr5 (199-236)||(25033571-25033608)
chr5 (199-236)||(25653207-25653244)
chr5 (199-236)||(29616135-29616172)
chr5 (199-236)||(32363108-32363145)
chr5 (199-236)||(41152527-41152564)
chr5 (199-235)||(7827497-7827533)
chr5 (200-236)||(14279218-14279254)
chr5 (344-375)||(4938431-4938462)
chr5 (341-380)||(19241644-19241683)
chr5 (341-380)||(29616188-29616227)
chr5 (341-380)||(42318220-42318259)
chr5 (341-375)||(4219115-4219149)
chr5 (341-375)||(13479293-13479327)
chr5 (396-442)||(27942790-27942836)
chr5 (341-375)||(31008099-31008133)
chr5 (341-375)||(42804483-42804517)
chr5 (199-236)||(8176020-8176057)
chr5 (199-236)||(13479243-13479280)
chr5 (199-236)||(21368637-21368674)
chr5 (199-236)||(23089916-23089953)
chr5 (397-442)||(42806727-42806772)
chr5 (200-236)||(12913234-12913270)
chr5 (200-236)||(15972969-15973005)
chr5 (200-236)||(37882130-37882166)
chr5 (341-373)||(39238886-39238918)
chr5 (46-102)||(39239060-39239116)
chr5 (402-442)||(40889194-40889234)
[»] chr2 (55 HSPs)
chr2 (199-407)||(44280328-44280538)
chr2 (199-335)||(22349552-22349688)
chr2 (199-322)||(14383268-14383391)
chr2 (199-322)||(36527117-36527242)
chr2 (199-335)||(43021975-43022114)
chr2 (199-335)||(1072712-1072849)
chr2 (30-105)||(44280621-44280696)
chr2 (30-105)||(36527328-36527403)
chr2 (30-105)||(14383487-14383562)
chr2 (199-346)||(7762833-7762969)
chr2 (199-312)||(9118132-9118246)
chr2 (285-346)||(17486125-17486186)
chr2 (285-346)||(36209188-36209249)
chr2 (199-291)||(926502-926594)
chr2 (280-346)||(6363673-6363739)
chr2 (285-335)||(7585260-7585310)
chr2 (285-346)||(1308407-1308468)
chr2 (199-236)||(7585184-7585221)
chr2 (199-236)||(9072621-9072658)
chr2 (199-236)||(12858274-12858311)
chr2 (199-236)||(30819318-30819355)
chr2 (199-236)||(39432412-39432449)
chr2 (199-346)||(4279376-4279513)
chr2 (341-380)||(14383306-14383345)
chr2 (341-380)||(36527155-36527194)
chr2 (341-380)||(43022026-43022065)
chr2 (341-375)||(4279432-4279466)
chr2 (341-375)||(14151936-14151970)
chr2 (341-374)||(1072759-1072792)
chr2 (199-236)||(1308331-1308368)
chr2 (199-236)||(1987527-1987564)
chr2 (199-236)||(4296303-4296340)
chr2 (285-346)||(5145103-5145164)
chr2 (199-236)||(8855382-8855419)
chr2 (199-236)||(13151232-13151269)
chr2 (199-236)||(17928855-17928892)
chr2 (297-346)||(17928945-17928994)
chr2 (199-236)||(36855056-36855093)
chr2 (247-283)||(14151938-14151974)
chr2 (199-235)||(31184938-31184974)
chr2 (294-346)||(39490428-39490480)
chr2 (200-236)||(43494918-43494954)
chr2 (344-375)||(5145077-5145108)
chr2 (344-379)||(6363725-6363760)
chr2 (341-380)||(22349598-22349637)
chr2 (206-236)||(5145027-5145057)
chr2 (396-442)||(7588229-7588275)
chr2 (341-375)||(7762879-7762913)
chr2 (396-442)||(30822309-30822355)
chr2 (199-236)||(2778797-2778834)
chr2 (199-236)||(36209112-36209149)
chr2 (199-236)||(37246037-37246074)
chr2 (248-309)||(43494974-43495035)
chr2 (396-428)||(4296504-4296536)
chr2 (199-235)||(31204664-31204700)
[»] chr3 (109 HSPs)
chr3 (199-407)||(4046330-4046541)
chr3 (199-335)||(6044982-6045118)
chr3 (199-335)||(42564230-42564366)
chr3 (199-322)||(51998890-51999013)
chr3 (199-335)||(10424304-10424442)
chr3 (199-322)||(50734313-50734436)
chr3 (199-322)||(50778419-50778542)
chr3 (199-322)||(37182718-37182842)
chr3 (199-322)||(32120088-32120212)
chr3 (199-322)||(44084605-44084729)
chr3 (199-335)||(55027047-55027183)
chr3 (199-335)||(20139841-20139977)
chr3 (30-105)||(4046633-4046708)
chr3 (199-319)||(41183570-41183691)
chr3 (199-335)||(38571797-38571937)
chr3 (248-335)||(15007479-15007566)
chr3 (30-105)||(51998724-51998799)
chr3 (32-105)||(37182560-37182633)
chr3 (199-346)||(46136922-46137058)
chr3 (199-346)||(12975113-12975249)
chr3 (199-346)||(26162189-26162325)
chr3 (200-326)||(46572610-46572737)
chr3 (248-307)||(7008422-7008481)
chr3 (199-346)||(35471967-35472103)
chr3 (199-283)||(29701991-29702075)
chr3 (285-335)||(33187837-33187887)
chr3 (285-346)||(11908320-11908381)
chr3 (285-346)||(51999794-51999855)
chr3 (34-102)||(29702173-29702241)
chr3 (199-346)||(31169915-31170052)
chr3 (285-332)||(49407049-49407096)
chr3 (30-81)||(50734555-50734606)
chr3 (30-81)||(50778249-50778300)
chr3 (285-335)||(27847876-27847926)
chr3 (285-335)||(30415187-30415237)
chr3 (285-335)||(43475710-43475760)
chr3 (285-335)||(50415534-50415584)
chr3 (199-236)||(4873807-4873844)
chr3 (199-236)||(25787409-25787446)
chr3 (199-236)||(25829366-25829403)
chr3 (199-236)||(30415111-30415148)
chr3 (199-236)||(33934896-33934933)
chr3 (34-99)||(41183781-41183846)
chr3 (199-236)||(42598064-42598101)
chr3 (285-346)||(49027144-49027205)
chr3 (285-346)||(51304842-51304903)
chr3 (341-380)||(37182765-37182804)
chr3 (341-380)||(41183605-41183644)
chr3 (341-380)||(42564281-42564320)
chr3 (199-346)||(48886482-48886618)
chr3 (341-380)||(51998936-51998975)
chr3 (199-233)||(7008504-7008538)
chr3 (341-375)||(20139897-20139931)
chr3 (341-375)||(31169962-31169996)
chr3 (199-291)||(49086464-49086556)
chr3 (199-236)||(5844672-5844709)
chr3 (199-236)||(11908421-11908458)
chr3 (199-236)||(17469799-17469836)
chr3 (199-236)||(25450134-25450171)
chr3 (199-236)||(27847968-27848005)
chr3 (285-346)||(35540294-35540355)
chr3 (285-346)||(36178207-36178268)
chr3 (199-236)||(42602253-42602290)
chr3 (199-236)||(43475801-43475838)
chr3 (199-236)||(47147656-47147693)
chr3 (199-236)||(50034675-50034712)
chr3 (199-236)||(51436010-51436047)
chr3 (200-236)||(28410777-28410813)
chr3 (200-236)||(35852893-35852929)
chr3 (200-236)||(43022986-43023022)
chr3 (341-380)||(6045028-6045067)
chr3 (248-283)||(6832948-6832983)
chr3 (344-375)||(6832952-6832983)
chr3 (344-375)||(7008450-7008481)
chr3 (341-380)||(10424352-10424391)
chr3 (200-235)||(15493431-15493466)
chr3 (341-380)||(32120135-32120174)
chr3 (344-375)||(35540268-35540299)
chr3 (344-375)||(43475755-43475786)
chr3 (341-380)||(44084643-44084682)
chr3 (341-380)||(50734351-50734390)
chr3 (341-380)||(50778465-50778504)
chr3 (396-442)||(6048422-6048468)
chr3 (396-442)||(10426156-10426202)
chr3 (341-371)||(12975173-12975203)
chr3 (341-375)||(29701995-29702029)
chr3 (396-442)||(30418156-30418202)
chr3 (202-236)||(33187764-33187798)
chr3 (341-375)||(46136968-46137002)
chr3 (341-375)||(49407020-49407054)
chr3 (341-375)||(51304898-51304932)
chr3 (397-438)||(4046284-4046325)
chr3 (285-346)||(6832896-6832957)
chr3 (199-236)||(6832997-6833034)
chr3 (199-236)||(7520781-7520818)
chr3 (199-232)||(33751700-33751733)
chr3 (199-236)||(35540217-35540254)
chr3 (199-236)||(36178134-36178171)
chr3 (199-236)||(37410138-37410175)
chr3 (207-236)||(49027075-49027104)
chr3 (199-236)||(49356939-49356976)
chr3 (199-236)||(49822598-49822635)
chr3 (199-236)||(50020378-50020415)
chr3 (199-236)||(51304943-51304980)
chr3 (199-235)||(15007581-15007617)
chr3 (200-236)||(26549895-26549931)
chr3 (200-236)||(49146972-49147008)
chr3 (200-236)||(49710155-49710191)
chr3 (200-236)||(53722875-53722911)
[»] chr4 (90 HSPs)
chr4 (202-407)||(52773101-52773309)
chr4 (199-335)||(8995039-8995175)
chr4 (199-335)||(34463189-34463325)
chr4 (199-335)||(3529908-3530045)
chr4 (199-323)||(16021137-16021261)
chr4 (199-335)||(13113817-13113952)
chr4 (199-335)||(34198908-34199045)
chr4 (199-320)||(55549703-55549824)
chr4 (248-346)||(23539371-23539469)
chr4 (199-320)||(40721311-40721431)
chr4 (199-335)||(56054538-56054669)
chr4 (30-104)||(52773402-52773476)
chr4 (199-327)||(28901408-28901538)
chr4 (199-332)||(33077508-33077643)
chr4 (199-326)||(31336182-31336312)
chr4 (30-84)||(16021377-16021431)
chr4 (30-104)||(55549540-55549614)
chr4 (200-283)||(38173877-38173960)
chr4 (268-335)||(28901240-28901306)
chr4 (34-102)||(52018161-52018227)
chr4 (199-312)||(48506245-48506359)
chr4 (199-346)||(27864188-27864324)
chr4 (285-335)||(53347415-53347465)
chr4 (293-346)||(34434277-34434330)
chr4 (286-346)||(4981944-4982004)
chr4 (287-335)||(16171623-16171671)
chr4 (341-380)||(16021176-16021215)
chr4 (199-346)||(35809674-35809810)
chr4 (285-335)||(3614975-3615025)
chr4 (199-236)||(3614899-3614936)
chr4 (199-236)||(16171542-16171579)
chr4 (199-236)||(21654502-21654539)
chr4 (199-236)||(31848453-31848490)
chr4 (34-102)||(38174054-38174122)
chr4 (200-345)||(39048704-39048850)
chr4 (199-346)||(19273198-19273334)
chr4 (199-346)||(33607291-33607427)
chr4 (341-380)||(34463235-34463274)
chr4 (247-326)||(39113483-39113562)
chr4 (341-380)||(55549749-55549788)
chr4 (31-77)||(13114102-13114148)
chr4 (341-375)||(38173881-38173915)
chr4 (199-291)||(40596414-40596506)
chr4 (199-236)||(2211996-2212033)
chr4 (285-346)||(13093890-13093951)
chr4 (199-236)||(17329554-17329591)
chr4 (285-346)||(17329632-17329693)
chr4 (199-236)||(23389622-23389659)
chr4 (199-236)||(28447609-28447646)
chr4 (199-236)||(45081128-45081165)
chr4 (294-335)||(45081214-45081255)
chr4 (199-236)||(46914190-46914227)
chr4 (199-236)||(53181132-53181169)
chr4 (200-236)||(55598-55634)
chr4 (200-236)||(55408218-55408254)
chr4 (341-380)||(3529955-3529994)
chr4 (341-380)||(8995090-8995129)
chr4 (285-332)||(18469081-18469128)
chr4 (199-291)||(19409809-19409902)
chr4 (344-375)||(23539371-23539402)
chr4 (344-375)||(28901456-28901487)
chr4 (341-380)||(33077554-33077593)
chr4 (341-380)||(34198955-34198994)
chr4 (341-380)||(40721347-40721386)
chr4 (205-236)||(53347344-53347375)
chr4 (344-375)||(53347389-53347420)
chr4 (344-375)||(56054590-56054621)
chr4 (396-442)||(3533035-3533081)
chr4 (396-442)||(3618180-3618226)
chr4 (396-442)||(8992083-8992129)
chr4 (199-233)||(12159129-12159163)
chr4 (341-375)||(13093861-13093895)
chr4 (396-442)||(13110861-13110907)
chr4 (206-236)||(18469011-18469041)
chr4 (341-375)||(27864244-27864278)
chr4 (341-375)||(35809730-35809764)
chr4 (202-236)||(48403559-48403593)
chr4 (199-236)||(7401563-7401600)
chr4 (341-374)||(19409822-19409855)
chr4 (199-236)||(23539321-23539358)
chr4 (200-233)||(33527082-33527115)
chr4 (199-236)||(34434196-34434233)
chr4 (199-236)||(36658825-36658862)
chr4 (203-236)||(47749732-47749765)
chr4 (293-346)||(48403637-48403690)
chr4 (199-235)||(10090138-10090174)
chr4 (341-373)||(19273256-19273288)
chr4 (200-236)||(21047596-21047632)
chr4 (200-236)||(39113432-39113468)
chr4 (402-442)||(52773051-52773091)
[»] chr7 (51 HSPs)
chr7 (199-335)||(28317733-28317869)
chr7 (199-335)||(42881888-42882024)
chr7 (206-335)||(22660167-22660296)
chr7 (199-332)||(40300585-40300718)
chr7 (199-335)||(47159061-47159198)
chr7 (199-322)||(30720417-30720539)
chr7 (199-335)||(33078456-33078593)
chr7 (199-335)||(33508254-33508388)
chr7 (248-332)||(30566909-30566993)
chr7 (199-346)||(114958-115094)
chr7 (30-84)||(30720653-30720707)
chr7 (199-346)||(38970332-38970470)
chr7 (199-346)||(26815407-26815544)
chr7 (199-335)||(37952071-37952196)
chr7 (286-346)||(40690607-40690667)
chr7 (200-335)||(35192757-35192893)
chr7 (285-346)||(20354541-20354602)
chr7 (286-346)||(32126980-32127040)
chr7 (286-346)||(32749235-32749295)
chr7 (285-335)||(36521791-36521841)
chr7 (199-236)||(30630287-30630324)
chr7 (199-236)||(48985266-48985303)
chr7 (341-380)||(22660218-22660257)
chr7 (341-380)||(28317779-28317818)
chr7 (199-346)||(45549041-45549177)
chr7 (341-375)||(115014-115048)
chr7 (202-236)||(36521880-36521914)
chr7 (285-331)||(39770025-39770071)
chr7 (199-236)||(5813661-5813698)
chr7 (199-236)||(32126903-32126940)
chr7 (199-236)||(32749335-32749372)
chr7 (199-236)||(33379668-33379705)
chr7 (199-236)||(35028472-35028509)
chr7 (199-236)||(37888763-37888800)
chr7 (285-346)||(38351897-38351958)
chr7 (199-236)||(39770112-39770149)
chr7 (203-236)||(40690709-40690742)
chr7 (285-345)||(43201665-43201726)
chr7 (200-236)||(22194615-22194651)
chr7 (200-236)||(43570795-43570831)
chr7 (341-380)||(30720455-30720494)
chr7 (344-375)||(38970388-38970419)
chr7 (341-380)||(40300631-40300670)
chr7 (341-380)||(42881939-42881978)
chr7 (341-380)||(47159108-47159147)
chr7 (396-442)||(22656971-22657017)
chr7 (199-236)||(24793819-24793856)
chr7 (200-233)||(25038245-25038278)
chr7 (199-236)||(25217942-25217979)
chr7 (199-236)||(37888222-37888259)
chr7 (341-374)||(45549087-45549120)
[»] chr1 (71 HSPs)
chr1 (199-335)||(48384829-48384965)
chr1 (199-322)||(45623181-45623304)
chr1 (207-335)||(31159717-31159844)
chr1 (199-322)||(51494124-51494247)
chr1 (199-322)||(37690946-37691068)
chr1 (199-322)||(29919666-29919789)
chr1 (199-333)||(17675995-17676128)
chr1 (199-322)||(19578562-19578687)
chr1 (199-322)||(14096984-14097109)
chr1 (199-320)||(10265684-10265805)
chr1 (199-335)||(48407654-48407792)
chr1 (30-105)||(45623012-45623087)
chr1 (30-105)||(51493954-51494029)
chr1 (30-84)||(29919897-29919951)
chr1 (30-84)||(37690779-37690833)
chr1 (30-84)||(14097224-14097278)
chr1 (199-283)||(43739367-43739451)
chr1 (280-346)||(51523550-51523616)
chr1 (199-335)||(33167510-33167635)
chr1 (199-333)||(8471509-8471633)
chr1 (199-346)||(51156335-51156471)
chr1 (205-346)||(30878290-30878419)
chr1 (199-345)||(36303368-36303514)
chr1 (247-324)||(41542603-41542680)
chr1 (285-346)||(45455631-45455692)
chr1 (285-335)||(2474850-2474900)
chr1 (293-335)||(36231209-36231251)
chr1 (285-335)||(45363773-45363823)
chr1 (199-236)||(643502-643539)
chr1 (199-236)||(2474774-2474811)
chr1 (199-332)||(37822901-37823022)
chr1 (199-236)||(45242435-45242472)
chr1 (341-380)||(14097022-14097061)
chr1 (344-379)||(30878332-30878367)
chr1 (341-380)||(31159768-31159807)
chr1 (341-380)||(37690991-37691030)
chr1 (341-380)||(45623227-45623266)
chr1 (285-332)||(47297317-47297364)
chr1 (247-345)||(48729708-48729807)
chr1 (341-380)||(51494170-51494209)
chr1 (202-236)||(36231307-36231341)
chr1 (341-375)||(43739371-43739405)
chr1 (253-326)||(3754760-3754833)
chr1 (199-236)||(8464950-8464987)
chr1 (199-236)||(27629992-27630029)
chr1 (285-346)||(29524184-29524245)
chr1 (199-236)||(29524287-29524324)
chr1 (199-236)||(31471571-31471608)
chr1 (199-236)||(37419876-37419913)
chr1 (199-236)||(45363864-45363901)
chr1 (341-374)||(48407711-48407744)
chr1 (199-236)||(51523650-51523687)
chr1 (344-380)||(19578613-19578649)
chr1 (199-235)||(37646089-37646125)
chr1 (199-235)||(44450917-44450953)
chr1 (199-235)||(44651459-44651495)
chr1 (341-380)||(29919704-29919743)
chr1 (344-375)||(36231254-36231285)
chr1 (341-380)||(48384875-48384914)
chr1 (396-442)||(2478055-2478101)
chr1 (396-442)||(23093063-23093109)
chr1 (396-442)||(45239435-45239481)
chr1 (396-442)||(48387834-48387880)
chr1 (199-236)||(17786629-17786666)
chr1 (341-374)||(33167556-33167589)
chr1 (341-374)||(36303436-36303469)
chr1 (199-236)||(52930344-52930381)
chr1 (200-236)||(3754708-3754744)
chr1 (200-236)||(20584473-20584509)
chr1 (200-236)||(47297242-47297278)
chr1 (200-236)||(48927259-48927295)
[»] scaffold1905 (3 HSPs)
scaffold1905 (199-335)||(213-349)
scaffold1905 (199-346)||(1085-1221)
scaffold1905 (341-380)||(264-303)
[»] chr8 (57 HSPs)
chr8 (199-335)||(15056867-15057003)
chr8 (199-322)||(42860220-42860344)
chr8 (199-322)||(35932154-35932277)
chr8 (199-335)||(12272111-12272247)
chr8 (199-322)||(45100674-45100798)
chr8 (30-105)||(45100506-45100581)
chr8 (30-84)||(42860455-42860509)
chr8 (199-346)||(1633069-1633205)
chr8 (199-346)||(29731965-29732101)
chr8 (285-346)||(13947745-13947806)
chr8 (285-346)||(30529374-30529435)
chr8 (199-346)||(26244911-26245047)
chr8 (285-335)||(1954977-1955027)
chr8 (199-330)||(31129102-31129221)
chr8 (285-346)||(13783917-13783978)
chr8 (199-236)||(13817434-13817471)
chr8 (285-346)||(23550024-23550085)
chr8 (293-346)||(38204964-38205017)
chr8 (199-236)||(42861080-42861117)
chr8 (293-346)||(43523984-43524037)
chr8 (285-346)||(44150181-44150242)
chr8 (341-380)||(15056918-15056957)
chr8 (199-280)||(40283944-40284025)
chr8 (341-380)||(42860258-42860297)
chr8 (341-380)||(45100721-45100760)
chr8 (202-236)||(5214180-5214214)
chr8 (248-345)||(17494306-17494403)
chr8 (199-291)||(26631805-26631897)
chr8 (199-291)||(30470471-30470563)
chr8 (203-236)||(1954904-1954937)
chr8 (199-236)||(4625177-4625214)
chr8 (199-236)||(5736405-5736442)
chr8 (199-236)||(8449686-8449723)
chr8 (199-236)||(13783838-13783875)
chr8 (199-236)||(18028996-18029033)
chr8 (199-236)||(26748611-26748648)
chr8 (199-236)||(34954985-34955022)
chr8 (248-309)||(41477507-41477568)
chr8 (386-426)||(7511779-7511819)
chr8 (345-380)||(35932192-35932227)
chr8 (396-442)||(1957949-1957995)
chr8 (202-236)||(7511416-7511450)
chr8 (396-442)||(15053930-15053976)
chr8 (341-375)||(40283945-40283979)
chr8 (199-236)||(23550125-23550162)
chr8 (199-236)||(35101779-35101816)
chr8 (199-236)||(36912951-36912988)
chr8 (293-346)||(44503545-44503598)
chr8 (253-309)||(231665-231721)
chr8 (253-309)||(708076-708132)
chr8 (253-309)||(745288-745344)
chr8 (253-309)||(869183-869239)
chr8 (199-235)||(13497655-13497691)
chr8 (341-373)||(26244969-26245001)
chr8 (200-236)||(30289415-30289451)
chr8 (199-231)||(38204920-38204952)
chr8 (200-236)||(39810709-39810745)
[»] chr6 (35 HSPs)
chr6 (199-335)||(10886524-10886660)
chr6 (199-335)||(12513311-12513447)
chr6 (199-333)||(12502196-12502331)
chr6 (199-335)||(8222397-8222535)
chr6 (199-332)||(30446551-30446687)
chr6 (262-345)||(24115323-24115407)
chr6 (285-346)||(18642529-18642590)
chr6 (199-346)||(26653807-26653943)
chr6 (199-346)||(26759776-26759912)
chr6 (285-335)||(34242702-34242752)
chr6 (199-236)||(635065-635102)
chr6 (199-236)||(6377131-6377168)
chr6 (199-236)||(8668819-8668856)
chr6 (199-236)||(17957999-17958036)
chr6 (199-236)||(34841860-34841897)
chr6 (341-375)||(30446604-30446638)
chr6 (293-335)||(34841771-34841813)
chr6 (199-236)||(198210-198247)
chr6 (199-236)||(2503728-2503765)
chr6 (199-236)||(24348861-24348898)
chr6 (199-236)||(29951725-29951762)
chr6 (199-236)||(34328783-34328820)
chr6 (200-236)||(6725324-6725360)
chr6 (345-380)||(10886575-10886610)
chr6 (285-332)||(24348766-24348813)
chr6 (344-374)||(8222454-8222484)
chr6 (344-374)||(12502251-12502281)
chr6 (344-374)||(12513368-12513398)
chr6 (396-442)||(17960990-17961036)
chr6 (341-375)||(26653853-26653887)
chr6 (341-375)||(26759822-26759856)
chr6 (396-442)||(34838879-34838925)
chr6 (285-344)||(7540488-7540548)
chr6 (200-236)||(7541326-7541362)
chr6 (200-236)||(34242791-34242827)
[»] scaffold0004 (1 HSPs)
scaffold0004 (199-346)||(106118-106254)
[»] scaffold0012 (1 HSPs)
scaffold0012 (200-335)||(124322-124458)
[»] scaffold1454 (1 HSPs)
scaffold1454 (285-346)||(553-614)
[»] scaffold0021 (2 HSPs)
scaffold0021 (287-346)||(109941-110000)
scaffold0021 (199-236)||(109868-109905)
[»] scaffold0758 (2 HSPs)
scaffold0758 (199-236)||(6370-6407)
scaffold0758 (341-374)||(6418-6451)
[»] scaffold0362 (1 HSPs)
scaffold0362 (396-442)||(5051-5097)
[»] scaffold0054 (1 HSPs)
scaffold0054 (396-442)||(56861-56907)
[»] scaffold1183 (1 HSPs)
scaffold1183 (200-236)||(28-64)


Alignment Details
Target: chr5 (Bit Score: 157; Significance: 3e-83; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 199 - 442
Target Start/End: Original strand, 13592565 - 13592819
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  13592565 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcatattattagctttgtattagcctttct 13592664  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaagtttttcactctcttaatcttattattagatttggacac--aaataaatta 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  13592665 tttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaagtttttcactctcttaatcttattattagatttggacacataaataaatta 13592764  T
Q  396 --------cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
            ||||| |||||||||||||||||||| |||||| |||||||||||||    
T  13592765 cttgtgtgcttgtttgttgtcttgcattttaagctatttgtgtgacccttactta 13592819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 199 - 325
Target Start/End: Original strand, 23648713 - 23648839
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||| |||||||||||||||||||          |||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  23648713 ctctataaatagagacttagatcatttgatttggacacagaaaaaaaatcaagttttttaccctcttaatcttattattagctttgtattagcctttctt 23648812  T
Q  299 ttgaagttttagtgtttatttagtgaa 325  Q
    |||||||||||||||||||||||||||    
T  23648813 ttgaagttttagtgtttatttagtgaa 23648839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 199 - 325
Target Start/End: Complemental strand, 23809859 - 23809733
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||| |||||||||||||||||||          |||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  23809859 ctctataaatagagacttagatcatttgatttggacacagaaaaaaaatcaagttttttaccctcttaatcttattattagctttgtattagcctttctt 23809760  T
Q  299 ttgaagttttagtgtttatttagtgaa 325  Q
    |||||||||||||||||||||||||||    
T  23809759 ttgaagttttagtgtttatttagtgaa 23809733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 29616190 - 29616278
Alignment:
Q  247 tcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29616190 tcaagtttttcaccctcttaatcttattattagctttgtattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 29616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 199 - 323
Target Start/End: Complemental strand, 19241728 - 19241605
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  19241728 ctctataaatagagacttggatcatttgatttggaca-tagaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttctt 19241630  T
Q  299 ttgaagttttagtgtttatttagtg 323  Q
    |||||||||||||||||||||||||    
T  19241629 ttgaagttttagtgtttatttagtg 19241605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 42318305 - 42318182
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||  ||||||||||||||||||          |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  42318305 ctctataaatagagacttaaatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagcctttctt 42318206  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  42318205 ttgaagttttagtgtttatttagt 42318182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 13592403 - 13592478
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13592403 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 13592478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 23648549 - 23648623
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcg 104  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23648549 ggaagtgttgaaacaattcaacatgttgaatgtctggcccacggagacacttggcatgttttgattggctgctcg 23648623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 23810023 - 23809949
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcg 104  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23810023 ggaagtgttgaaacaattcaacatgttgaatgtctggcccacggagacacttggcatgttttgattggctgctcg 23809949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 31008053 - 31008173
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||| ||| |||||||| ||||||| ||||||    
T  31008053 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatctcattattagctttatattagcttttctt 31008152  T
Q  299 ttgaagttttagtgtttattt 319  Q
    ||||||||||||| |||||||    
T  31008153 ttgaagttttagtctttattt 31008173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 36572052 - 36572188
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntc-aagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           | |||||||| ||||||||||| ||||| |||||||| ||||| | |||||    
T  36572052 ctctataaatagagacttggatcatttgatttggacacaagaaaaaaaaccaagtttttaactctcttaat-ttattattagctttctattaacttttct 36572150  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||| |||||||||||||||||||||||    
T  36572151 tttgaagttttagtctttatttagtgaaatggatccca 36572188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 30644688 - 30644826
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt--caagtttttcactctcttaatcttattgttagctttgtattagcctttc 296  Q
    |||||||||| |||||||||||||||||||||||||||             ||||||||||||||| ||||||||||| |||||||| ||||||| ||||    
T  30644688 ctctataaattgagacttggatcatttgatttggacacagaaaaaaaaaaccaagtttttcactcttttaatcttattattagctttctattagcttttc 30644787  T
Q  297 ttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||| | ||||||| |||||||||||||    
T  30644788 ttttgaagttttagtctctatttagggaaatggatccca 30644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 34529066 - 34529192
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttt 299  Q
    ||||||||||||||||||| |||||||||||||||||          |||||||||||||| |||||||||| || ||| |||| ||||||| |||||||    
T  34529066 tctataaatagagacttggttcatttgatttggacacaaaaaaaaaatcaagtttttcactatcttaatcttgttattatctttctattagcttttcttt 34529165  T
Q  300 tgaagttttagtgtttatttagtgaaa 326  Q
    |||||||||| | ||| ||||||||||    
T  34529166 tgaagttttaatctttttttagtgaaa 34529192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 201 - 332
Target Start/End: Original strand, 42804440 - 42804559
Alignment:
Q  201 ctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctttt 300  Q
    ||||||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||           ||||||    
T  42804440 ctataaatagagacttgaatcatttgatttggacacagaaaaaaa-tcaagtttttcactctcttaatcttattgttagcttt-----------tctttt 42804527  T
Q  301 gaagttttagtgtttatttagtgaaatggatc 332  Q
    ||||||||||| ||||||||||||||||||||    
T  42804528 gaagttttagtctttatttagtgaaatggatc 42804559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 4219068 - 4219205
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||| ||||||||||||||||||||||||||||||||           |||| |||||||||||||||||||||||           |||||| |||||    
T  4219068 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaaatcaaatttttcactctcttaatcttatt-----------attagcatttct 4219156  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    |||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  4219157 tttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 4219205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 27405837 - 27405962
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||  ||||||||||||||||||           ||| ||||||||||||||||||||||| ||||||||           ||||    
T  27405837 ctctataaatagagacttaaatcatttgatttggacacagaaaaaaaaccaaatttttcactctcttaatcttattattagcttt-----------tctt 27405925  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27405926 ttgaagttttagtctttatttagtgaaatggatccca 27405962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 25670460 - 25670595
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||| ||||||||||          | || |||||||||||||||||||||||           |||||| ||||||    
T  25670460 ctctataaatagagacttggatcatttcatttggacacataaaaaaaataaa-tttttcactctcttaatcttatt-----------attagcatttctt 25670547  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  25670548 ttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 25670595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 4938511 - 4938427
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagcttt 283  Q
    ||||||||||| ||||||||||||||||||||||||||           ||||||||||||||||||||||||||| ||||||||    
T  4938511 ctctataaataaagacttggatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatcttattattagcttt 4938427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 27946041 - 27945916
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||           ||   ||||||||||||||||||||||           |||||| ||||||    
T  27946041 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaccataattttcactctcttaatcttatt-----------attagcatttctt 27945953  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  27945952 ttgaagttttagtctttaattagtgaaatggatccca 27945916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 31007887 - 31007955
Alignment:
Q  34 gtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgct 102  Q
    ||||||||  |||||||||||||||| || ||||||||  |||||||||||||||||||||||| ||||    
T  31007887 gtgttgaactaattcaacatgttgaaagcatggcccacatagacacttggcatgttttgattggatgct 31007955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 32973114 - 32973164
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  32973114 tattagcatttcttttgaagttttagtctttaattagtgaaatggatccca 32973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 40892136 - 40892086
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  40892136 tattagcatttcttttgaagttttagtctttaattagtgaaatggatccca 40892086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 3455248 - 3455211
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3455248 ctctataaatagagacttggatcatttgatttggacac 3455211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 4580429 - 4580392
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4580429 ctctataaatagagacttggatcatttgatttggacac 4580392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 23089878 - 23089817
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||| ||||||||||||||  |||||||||    
T  23089878 tattagcatttcttttgaagttttagtctttgtttattgaaatggatcccaataataatcaa 23089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 31011730 - 31011767
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31011730 ctctataaatagagacttggatcatttgatttggacac 31011767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 32363193 - 32363246
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  32363193 tttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 32363246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 32973038 - 32973075
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32973038 ctctataaatagagacttggatcatttgatttggacac 32973075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 39008844 - 39008791
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  39008844 tttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 39008791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 346
Target Start/End: Complemental strand, 39238958 - 39238828
Alignment:
Q  205 aaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaag 304  Q
    ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||           ||| || ||||||||||||    
T  39238958 aaatagaaacttggatcatttgatttggacacagaataaaaatcaaatttttcactctcttaatcttatt-----------atttgcatttcttttgaag 39238870  T
Q  305 ttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||| |||||| ||||||||||||  |||||||||    
T  39238869 ttttagtttttgtttagtaaaatggatcccaataataatcaa 39238828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 40892212 - 40892175
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40892212 ctctataaatagagacttggatcatttgatttggacac 40892175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 7651560 - 7651492
Alignment:
Q  34 gtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgct 102  Q
    ||||||||  |||||||||||||||| || ||||||||  ||||||||| |||||||||||||| ||||    
T  7651560 gtgttgaacaaattcaacatgttgaaagcatggcccacatagacacttgacatgttttgattggatgct 7651492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 326
Target Start/End: Original strand, 27407473 - 27407552
Alignment:
Q  247 tcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtttatttagtgaaa 326  Q
    |||||||||||||| |||||||||| || ||| |||| || || | ||||||||||||||||| | ||| ||||||||||    
T  27407473 tcaagtttttcactatcttaatcttgttattatctttctaataacttttcttttgaagttttaatctttttttagtgaaa 27407552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 7651393 - 7651359
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttgga 233  Q
    |||||||||||||||||||||||||||||||||||    
T  7651393 ctctataaatagagacttggatcatttgatttgga 7651359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 23648910 - 23648956
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||    
T  23648910 cttgtttgttgtcttgcattttaagctatttgtgtgacccttactta 23648956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 23809662 - 23809616
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||    
T  23809662 cttgtttgttgtcttgcattttaagctatttgtgtgacccttactta 23809616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 3455166 - 3455113
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||  |||||||||    
T  3455166 tttcttttgaagttttagtctttgtttaatgaaatggatcccaataataatcaa 3455113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 309
Target Start/End: Original strand, 8681015 - 8681076
Alignment:
Q  248 caagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagtttta 309  Q
    ||||||||||||| |||||||||| || ||| |||| ||||| | |||||||||||||||||    
T  8681015 caagtttttcactatcttaatcttgttattatctttctattaacttttcttttgaagtttta 8681076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 9958104 - 9958067
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9958104 ctctataaatagagacttggatcatttgatttgaacac 9958067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 13479322 - 13479383
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||| ||||||||||||||| ||| |||||| ||||||||||||  |||||||||    
T  13479322 tattagcatttattttgaagttttagtctttgtttagtaaaatggatcccaataataatcaa 13479383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 25033608 - 25033571
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25033608 ctctataaatagagacttggttcatttgatttggacac 25033571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 25653244 - 25653207
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25653244 ctctataaatagagacttggttcatttgatttggacac 25653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 29616135 - 29616172
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29616135 ctctataaatagagactttgatcatttgatttggacac 29616172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 32363108 - 32363145
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  32363108 ctctacaaatagagacttggatcatttgatttggacac 32363145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 41152527 - 41152564
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  41152527 ctctataaatagagacttggttcatttgatttggacac 41152564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 7827533 - 7827497
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggaca 235  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7827533 ctctataaatagagacttggttcatttgatttggaca 7827497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 14279254 - 14279218
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||||    
T  14279254 tctataaatagagacttggttcatttgatttggacac 14279218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Complemental strand, 4938462 - 4938431
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  4938462 caagtttttcactctcttaatcttattattag 4938431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 19241683 - 19241644
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  19241683 aatcaagtttttcactctcttaatcttatcattagctttg 19241644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 29616188 - 29616227
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  29616188 aatcaagtttttcaccctcttaatcttattattagctttg 29616227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 42318259 - 42318220
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  42318259 aatcaaatttttcactctcttaatcttattattagctttg 42318220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 4219115 - 4219149
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  4219115 aatcaaatttttcactctcttaatcttattattag 4219149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 13479293 - 13479327
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  13479293 aatcaaatttttcactctcttaatcttattattag 13479327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 27942836 - 27942790
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  27942836 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 27942790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 31008099 - 31008133
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||| ||||||||    
T  31008099 aatcaagtttttcactctcttaatctcattattag 31008133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 42804483 - 42804517
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||||||| ||||    
T  42804483 aatcaagtttttcactctcttaatcttattgttag 42804517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 8176020 - 8176057
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  8176020 ctctataaatagagacttggttcatttaatttggacac 8176057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 13479243 - 13479280
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  13479243 ctctacaaatagaaacttggatcatttgatttggacac 13479280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 21368674 - 21368637
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  21368674 ctctataaatagaaacttggttcatttgatttggacac 21368637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 23089953 - 23089916
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  23089953 ctctacaaatagagacttggatcatttaatttggacac 23089916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 42806727 - 42806772
Alignment:
Q  397 ttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    |||| |||||||||||||||||||| |||||| |||||| ||||||    
T  42806727 ttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 42806772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 12913270 - 12913234
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||| |||||||| |||||||||||||||||    
T  12913270 tctataaataaagacttggttcatttgatttggacac 12913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 15973005 - 15972969
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||  |||||||||||||||||    
T  15973005 tctataaatagagacttgattcatttgatttggacac 15972969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 37882130 - 37882166
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| | |||||||||||||||    
T  37882130 tctataaatagagacttggttaatttgatttggacac 37882166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 39238918 - 39238886
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatt 373  Q
    |||||| ||||||||||||||||||||||||||    
T  39238918 aatcaaatttttcactctcttaatcttattatt 39238886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 39239116 - 39239060
Alignment:
Q  46 ttcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgct 102  Q
    |||||||||||||| ||||||||| | | ||||| |||| |||| ||||||||||||    
T  39239116 ttcaacatgttgaaagcctggcccgcagtgacacgtggcttgttatgattggctgct 39239060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 40889234 - 40889194
Alignment:
Q  402 tgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    |||||||||||||||||||| |||||| |||||| ||||||    
T  40889234 tgttgtcttgcattttaagctatttgtgtgacccgtactta 40889194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 199 - 407
Target Start/End: Complemental strand, 44280538 - 44280328
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  44280538 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagtctttctt 44280439  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaagtttttcactctcttaatcttattattagatttgg--acacaaataaattac 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  44280438 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaagtttttcactctcttaatcttattattagatttggatacagaaataaattac 44280339  T
Q  397 ttgtctgttgt 407  Q
    |||| ||||||    
T  44280338 ttgtgtgttgt 44280328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 22349552 - 22349688
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  22349552 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttctt 22349651  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||||||||||    
T  22349652 ttgaagttttagtgtttatttagtgaaatggatccca 22349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 14383391 - 14383268
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14383391 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttctt 14383292  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  14383291 ttgaagttttagtgtttatttagt 14383268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 36527242 - 36527117
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn--tcaagtttttcactctcttaatcttattgttagctttgtattagcctttc 296  Q
    ||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36527242 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttc 36527143  T
Q  297 ttttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||||    
T  36527142 ttttgaagttttagtgtttatttagt 36527117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 43022114 - 43021975
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn---tcaagtttttcactctcttaatcttattgttagctttgtattagccttt 295  Q
    ||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||  |||| |||||||||||||||    
T  43022114 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaatcaagtttttcactctcttaatcttatcattagatttgtattagccttt 43022015  T
Q  296 cttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  43022014 cttttgaagttttagtgtttatttagtgaaatgaatccca 43021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 1072712 - 1072849
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||| |||| ||||||| |||||    
T  1072712 ctctataaatagagacttggatcatttgatttggacacagagaaaaaaatcaagtttttcactctcttaatcttattattatctttctattagcttttct 1072811  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||| |||||||||| |||||||||||||||||||||||    
T  1072812 tttaaagttttagtctttatttagtgaaatggatccca 1072849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 44280696 - 44280621
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44280696 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttgacatgttttgattggctgctcgg 44280621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 36527403 - 36527328
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |   |||||||||||||||    
T  36527403 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcgg 36527328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 14383562 - 14383487
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |   |||||||||||||||    
T  14383562 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacgaagacacttggcgcgcgctgattggctgctcgg 14383487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 7762833 - 7762969
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||||||||||||||||||||||||||||          |||| |||||||||||||||||||||||           |||||| ||||||    
T  7762833 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttatt-----------attagcatttctt 7762921  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| ||| |||||||||||||||  |||||||||    
T  7762922 ttgaagttttagtctttgtttcgtgaaatggatcccaataataatcaa 7762969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 9118246 - 9118132
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||| ||||| ||| |||| ||||||| ||| |    
T  9118246 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagcttttat 9118147  T
Q  298 tttgaagttttagtg 312  Q
    ||| |||||||||||    
T  9118146 tttaaagttttagtg 9118132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 17486186 - 17486125
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  17486186 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 17486125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 36209188 - 36209249
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  36209188 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 36209249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 926502 - 926594
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagc 291  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| ||||||||||||| ||| |||| |||||||    
T  926502 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaccaagtttttcactatcttaatcttattattatctttctattagc 926594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 6363739 - 6363673
Alignment:
Q  280 ctttgtattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    |||| ||||||  ||||||||||||||||||| |||||||||| ||||||||||||  |||||||||    
T  6363739 ctttttattagattttcttttgaagttttagtctttatttagtaaaatggatcccaataataatcaa 6363673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 7585260 - 7585310
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  7585260 tattagcatttcttttgaagttttagtctttaattagtgaaatggatccca 7585310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 1308407 - 1308468
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||| ||||||  |||||||||    
T  1308407 tattagcatttcttttgaagttttagtctttgtttagtgaaatgtatcccaataataatcaa 1308468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 7585184 - 7585221
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7585184 ctctataaatagagacttggatcatttgatttggacac 7585221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 9072621 - 9072658
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9072621 ctctataaatagagacttggatcatttgatttggacac 9072658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 12858311 - 12858274
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12858311 ctctataaatagagacttggatcatttgatttggacac 12858274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 30819318 - 30819355
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30819318 ctctataaatagagacttggatcatttgatttggacac 30819355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 39432412 - 39432449
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39432412 ctctataaatagagacttggatcatttgatttggacac 39432449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 4279513 - 4279376
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||| |||||||||||||||||||||||||| |||||           |||||||||||||||||||||||||||| ||||||||           |||    
T  4279513 ctctacaaatagagacttggatcatttgattttgacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagcttt-----------tct 4279425  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    |||||||||||||  ||||||||||||||||| || ||  |||||||||    
T  4279424 tttgaagttttagactttatttagtgaaatggctcacaataataatcaa 4279376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 14383345 - 14383306
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  14383345 aatcaagtttttcactctcttaatcttattattagctttg 14383306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 36527194 - 36527155
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  36527194 aatcaagtttttcactctcttaatcttattattagctttg 36527155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 43022065 - 43022026
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  43022065 aatcaagtttttcactctcttaatcttatcattagatttg 43022026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 4279466 - 4279432
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||||||||||||    
T  4279466 aatcaagtttttcactctcttaatcttattattag 4279432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 14151936 - 14151970
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||||||||||||    
T  14151936 aatcaagtttttcactctcttaatcttattattag 14151970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 374
Target Start/End: Original strand, 1072759 - 1072792
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatta 374  Q
    ||||||||||||||||||||||||||||||||||    
T  1072759 aatcaagtttttcactctcttaatcttattatta 1072792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 1308331 - 1308368
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  1308331 ctctacaaatagagacttggatcatttgatttggacac 1308368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 1987564 - 1987527
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  1987564 ctctataaatagagacttggttcatttgatttggacac 1987527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 4296303 - 4296340
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4296303 ctctataaatagagacttggttcatttgatttggacac 4296340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 5145103 - 5145164
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| |||||||||| |||||||| ||||||||||||||| |||| ||  |||||||||    
T  5145103 tattagcatttcttttgatgttttagtctttatttagtgaaatagatctcaataataatcaa 5145164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 8855419 - 8855382
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8855419 ctctataaatagagacttggttcatttgatttggacac 8855382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 13151232 - 13151269
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||||||||||||| |||||    
T  13151232 ctctataaatagagacttggatcatttgatttcgacac 13151269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 17928855 - 17928892
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  17928855 ctctacaaatagagacttggatcatttgatttggacac 17928892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 17928945 - 17928994
Alignment:
Q  297 ttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  17928945 ttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 17928994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 36855056 - 36855093
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  36855056 ctctataaatagagacttggttcatttgatttggacac 36855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 14151938 - 14151974
Alignment:
Q  247 tcaagtttttcactctcttaatcttattgttagcttt 283  Q
    |||||||||||||||||||||||||||| ||||||||    
T  14151938 tcaagtttttcactctcttaatcttattattagcttt 14151974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 31184938 - 31184974
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggaca 235  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31184938 ctctataaatagagacttggttcatttgatttggaca 31184974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 39490428 - 39490480
Alignment:
Q  294 ttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    |||||||||||||||||| ||| ||||||||||||||| |||  |||||||||    
T  39490428 ttcttttgaagttttagtctttctttagtgaaatggattccaataataatcaa 39490480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 43494918 - 43494954
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43494918 tctataaatagagacttggttcatttgatttggacac 43494954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Original strand, 5145077 - 5145108
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  5145077 caagtttttcactctcttaatcttattattag 5145108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 379
Target Start/End: Complemental strand, 6363760 - 6363725
Alignment:
Q  344 caagtttttcactctcttaatcttattattagattt 379  Q
    |||||||||||||||||||||||| |||||||||||    
T  6363760 caagtttttcactctcttaatctttttattagattt 6363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 22349598 - 22349637
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  22349598 aatcaagtttttcactctcttaatcttatcattagctttg 22349637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 236
Target Start/End: Original strand, 5145027 - 5145057
Alignment:
Q  206 aatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||||||||||||    
T  5145027 aatagagacttggatcatttgatttggacac 5145057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 7588229 - 7588275
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  7588229 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 7588275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 7762879 - 7762913
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  7762879 aatcaaatttttcactctcttaatcttattattag 7762913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 30822309 - 30822355
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  30822309 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 30822355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 2778797 - 2778834
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| | |||||||||||||||    
T  2778797 ctctataaatagagacttggtttatttgatttggacac 2778834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 36209112 - 36209149
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  36209112 ctctacaaatagagacttggatcatttgatttagacac 36209149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 37246074 - 37246037
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  37246074 ctctataaatagagacttggttcatttaatttggacac 37246037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 309
Target Start/End: Original strand, 43494974 - 43495035
Alignment:
Q  248 caagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagtttta 309  Q
    ||||||||||||| ||||| | ||||| ||| |||| ||||||  |||||||||||||||||    
T  43494974 caagtttttcactatcttattgttattattatctttctattaggttttcttttgaagtttta 43495035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 428
Target Start/End: Original strand, 4296504 - 4296536
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgt 428  Q
    |||||||||||||||||||||||||| ||||||    
T  4296504 cttgtctgttgtcttgcattttaagctatttgt 4296536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 31204664 - 31204700
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggaca 235  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  31204664 ctctgtaaatagagacttggttcatttgatttggaca 31204700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 1e-72; HSPs: 109)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 199 - 407
Target Start/End: Complemental strand, 4046541 - 4046330
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||| ||||||||||||||||||           |||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  4046541 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcatttct 4046442  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaagtttttcactctcttaatcttattattagatttggacac--aaataaatta 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  4046441 tttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaaatttttcactctcttaatcttattattagatttggacacagaaataaatta 4046342  T
Q  396 cttgtctgttgt 407  Q
    | ||| ||||||    
T  4046341 catgtgtgttgt 4046330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 6044982 - 6045118
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  6044982 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttctt 6045081  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||||||||||    
T  6045082 ttgaagttttagtgtttatttagtgaaatggatccca 6045118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 42564366 - 42564230
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42564366 ctctataaatagagacttagatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttctt 42564267  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||||||||||    
T  42564266 ttgaagttttagtgtttatttagtgaaatggatccca 42564230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 51998890 - 51999013
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  51998890 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttctt 51998989  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  51998990 ttgaagttttagtgtttatttagt 51999013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 10424304 - 10424442
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn--tcaagtttttcactctcttaatcttattgttagctttgtattagcctttc 296  Q
    |||||||||||||||||||||| |||||||||||||||            |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  10424304 ctctataaatagagacttggattatttgatttggacacagaaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttc 10424403  T
Q  297 ttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10424404 ttttgaagttttagtgtttatttagtgaaatggatccca 10424442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 50734436 - 50734313
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  50734436 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagcctttctt 50734337  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  50734336 ttgaagttttagtgtttatttagt 50734313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 50778419 - 50778542
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  50778419 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagcctttctt 50778518  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  50778519 ttgaagttttagtgtttatttagt 50778542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 37182718 - 37182842
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37182718 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttct 37182817  T
Q  298 tttgaagttttagtgtttatttagt 322  Q
    |||||||||||||||||||||||||    
T  37182818 tttgaagttttagtgtttatttagt 37182842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 32120088 - 32120212
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  32120088 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagttattcactctcttaatcttattattagctttgtattagcctttct 32120187  T
Q  298 tttgaagttttagtgtttatttagt 322  Q
    |||||||||||||||||||||||||    
T  32120188 tttgaagttttagtgtttatttagt 32120212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 44084729 - 44084605
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  44084729 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagttattcactctcttaatcttattattagctttgtattagcctttct 44084630  T
Q  298 tttgaagttttagtgtttatttagt 322  Q
    |||||||||||||||||||||||||    
T  44084629 tttgaagttttagtgtttatttagt 44084605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 55027183 - 55027047
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||| ||| |||| ||||||| ||||||    
T  55027183 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagcttttctt 55027084  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    || |||||||||| |||||||||||||||||||||||    
T  55027083 ttaaagttttagtctttatttagtgaaatggatccca 55027047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 20139977 - 20139841
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||| |||           |||||||||||||||||||||||||||| |||||||| | ||| | ||||||    
T  20139977 ctctataaatagagacttggatcatttgatttgaacagagaaaaaaaatcaagtttttcactctcttaatcttattattagctttctcttaacttttctt 20139878  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
     |||||||||||| |||||||||||||||||||||||    
T  20139877 ctgaagttttagtctttatttagtgaaatggatccca 20139841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 4046708 - 4046633
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  4046708 ggaagtgttgaaacaattcaacatgttgaatgcatggtccacggagacacttggcatgttttgattggctgctcgg 4046633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 41183691 - 41183570
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| |||||||||| ||||| | |||    
T  41183691 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtgttagcttatct 41183592  T
Q  298 tttgaagttttagtgtttattt 319  Q
    |||||||||||||| |||||||    
T  41183591 tttgaagttttagtctttattt 41183570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 38571797 - 38571937
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt----caagtttttcactctcttaatcttattgttagctttgtattagcctt 294  Q
    ||||||||||||||||||||||||||||||||||||||               ||||||||||| ||||||||||||||| |||| ||| ||||| | ||    
T  38571797 ctctataaatagagacttggatcatttgatttggacacaggaaaaaaaaaaaccaagtttttcattctcttaatcttattattagttttctattaacttt 38571896  T
Q  295 tcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  38571897 tcttttgaagttttagtctttatttagtgaaatggatccca 38571937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 335
Target Start/End: Complemental strand, 15007566 - 15007479
Alignment:
Q  248 caagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||| ||||||||||||||| ||| |||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  15007566 caagtttttcattctcttaatcttattattaactttctattagtttttcttttgaagttttagtctttatttagtgaaatggatccca 15007479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 51998724 - 51998799
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |   |||||||||||||||    
T  51998724 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcgg 51998799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 37182560 - 37182633
Alignment:
Q  32 aagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |   |||||||||||||||    
T  37182560 aagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcgg 37182633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 46136922 - 46137058
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||||||| ||||||||||||||           ||||||||||||||||||||||||| ||           |||||| ||||||    
T  46136922 ctctataaatagagacttggataatttgatttggacatagaaaaaaaatcaagtttttcactctcttaatcttttt-----------attagcatttctt 46137010  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||    
T  46137011 ttgaagttttagtctttatttagtgaaatggatcccaataataatcaa 46137058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 12975249 - 12975113
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||           |  ||| ||||||    
T  12975249 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatt-----------aaaagcatttctt 12975161  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  12975160 ttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 12975113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 26162189 - 26162325
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||  || |||||||||||||||||||            |||||||||||||    
T  26162189 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcatattcttcactctcttaatcttata-----------attagcctttctt 26162277  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  26162278 ttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 26162325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 46572610 - 46572737
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacacnnnnnnnnnntc-aagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||| |||||||||||||||||           | |||||||||||| |||||||||| || ||| |||| ||||||| ||||||    
T  46572610 tctataaatagagacttggttcatttgatttggacacaaaaaaaaaaaccaagtttttcactatcttaatcttgttattatctttctattagcttttctt 46572709  T
Q  299 ttgaagttttagtgtttatttagtgaaa 326  Q
    ||||||||||| | ||| ||||||||||    
T  46572710 ttgaagttttaatctttttttagtgaaa 46572737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 7008481 - 7008422
Alignment:
Q  248 caagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttt 307  Q
    ||||||||||||||||||||||||||| |||||||| ||||| | |||||||||||||||    
T  7008481 caagtttttcactctcttaatcttattattagctttctattaacttttcttttgaagttt 7008422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 35471967 - 35472103
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||||||||||||||||||||||||||||          |||  ||||||||||||||||||||||            |||||| ||||||    
T  35471967 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaatcatatttttcactctcttaatcttata-----------attagcatttctt 35472055  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  35472056 ttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 35472103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 29702075 - 29701991
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagcttt 283  Q
    ||||||||||||||||||||||||||||||||||| ||          |||||||||||||||||||||||| ||| ||||||||    
T  29702075 ctctataaatagagacttggatcatttgatttggatacagaaaaaaaatcaagtttttcactctcttaatctcattattagcttt 29701991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 33187837 - 33187887
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  33187837 tattagcttttcttttgaagttttagtctttatttagtgaaatggatccca 33187887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 11908381 - 11908320
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  11908381 tattagcatttcttttgaagttttagtctttctttagtgaaatggatcccaataataatcaa 11908320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 51999794 - 51999855
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  51999794 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 51999855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 29702241 - 29702173
Alignment:
Q  34 gtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgct 102  Q
    ||||||||  |||||||||||||||| || ||||||||  |||||||||||||||||||||||| ||||    
T  29702241 gtgttgaacaaattcaacatgttgaaagcatggcccacatagacacttggcatgttttgattggatgct 29702173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 31169915 - 31170052
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||| ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||           ||||||| |||||    
T  31169915 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttat-----------tattagcatttct 31170003  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
     ||||||||||||| ||| |||||||||||| ||||||  |||||||||    
T  31170004 cttgaagttttagtctttgtttagtgaaatgaatcccaataataatcaa 31170052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 49407049 - 49407096
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatc 332  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  49407049 tattagcttttcttttgaagttttagtctttatttagtgaaatggatc 49407096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 50734606 - 50734555
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacactt 81  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  50734606 ggaagtgttgaaacaattcaacatgttgaatgtctggcccatggagatactt 50734555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 50778249 - 50778300
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacactt 81  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  50778249 ggaagtgttgaaacaattcaacatgttgaatgtctggcccatggagatactt 50778300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 27847926 - 27847876
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  27847926 tattagcatttcttttgaagttttagtctttaattagtgaaatggatccca 27847876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 30415187 - 30415237
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  30415187 tattagcatttcttttgaagttttagtctttaattagtgaaatggatccca 30415237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 43475760 - 43475710
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  43475760 tattagcttttcttttgaagttttagtctttatttagtgaaatgaatccca 43475710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 50415534 - 50415584
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  50415534 tattagcatttcttttgaaattttagtctttatttagtgaaatggatccca 50415584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 4873807 - 4873844
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4873807 ctctataaatagagacttggatcatttgatttggacac 4873844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 25787409 - 25787446
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25787409 ctctataaatagagacttggatcatttgatttggacac 25787446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 25829366 - 25829403
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25829366 ctctataaatagagacttggatcatttgatttggacac 25829403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 30415111 - 30415148
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30415111 ctctataaatagagacttggatcatttgatttggacac 30415148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 33934896 - 33934933
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33934896 ctctataaatagagacttggatcatttgatttggacac 33934933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 41183846 - 41183781
Alignment:
Q  34 gtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggct 99  Q
    ||||||||  |||||||||||||||| |||||| |||| |||||| ||| ||||||||||||||||    
T  41183846 gtgttgaataaattcaacatgttgaaagcctggtccacagagacatttgacatgttttgattggct 41183781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 42598064 - 42598101
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42598064 ctctataaatagagacttggatcatttgatttggacac 42598101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 49027144 - 49027205
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||||||| |  |||||||||    
T  49027144 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatcctaataataatcaa 49027205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 51304903 - 51304842
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||| ||||||||||||  |||||||||    
T  51304903 tattagcatttcttttgaagttttagtctttgtttagtaaaatggatcccaataataatcaa 51304842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 37182765 - 37182804
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  37182765 aatcaagtttttcactctcttaatcttattattagctttg 37182804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 41183644 - 41183605
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  41183644 aatcaagtttttcactctcttaatcttattattagctttg 41183605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 42564320 - 42564281
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  42564320 aatcaagtttttcactctcttaatcttattattagctttg 42564281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 48886482 - 48886618
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| |||||||||||| |||||||||||||||||||           |||||||||||||||||||||||||||           |  ||| ||||||    
T  48886482 ctctacaaatagagactttgatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatcttatt-----------aaaagcatttctt 48886570  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| ||||||||||||||| |||  |||||||||    
T  48886571 ttgaagttttagtctttgtttagtgaaatggattccaataataatcaa 48886618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 51998936 - 51998975
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  51998936 aatcaagtttttcactctcttaatcttattattagctttg 51998975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 7008538 - 7008504
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttgga 233  Q
    |||||||||||||||||||||||||||||||||||    
T  7008538 ctctataaatagagacttggatcatttgatttgga 7008504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 20139931 - 20139897
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||||||||||||    
T  20139931 aatcaagtttttcactctcttaatcttattattag 20139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 31169962 - 31169996
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||||||||||||    
T  31169962 aatcaagtttttcactctcttaatcttattattag 31169996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 49086556 - 49086464
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagc 291  Q
    ||||||||||||||| |||| |||||||||||||||||          |||||||||||||| |||| |||||||| ||| |||| |||||||    
T  49086556 ctctataaatagagatttggttcatttgatttggacacagaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagc 49086464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 5844672 - 5844709
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5844672 ctctataaatagagacttggttcatttgatttggacac 5844709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 11908458 - 11908421
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  11908458 ctctacaaatagagacttggatcatttgatttggacac 11908421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 17469836 - 17469799
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  17469836 ctctataaatagagacttggttcatttgatttggacac 17469799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 25450134 - 25450171
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25450134 ctctataaatagagacttggttcatttgatttggacac 25450171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 27848005 - 27847968
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||||||||||||| |||||    
T  27848005 ctctataaatagagacttggatcatttgattttgacac 27847968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 35540294 - 35540355
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||| | |||||||||||||||| ||| ||  |||||||||    
T  35540294 tattagcttttcttttgaagttttaatctttatttagtgaaatgaatctcaataataatcaa 35540355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 36178207 - 36178268
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||| ||||||||| ||  |||||||||    
T  36178207 tattagcatttcttttgaagttttagtctttgtttagtaaaatggatctcaataataatcaa 36178268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 42602290 - 42602253
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  42602290 ctctataaatagagacttggttcatttgatttggacac 42602253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 43475838 - 43475801
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||| |||||||||||||||||||    
T  43475838 ctctataaatagagactttgatcatttgatttggacac 43475801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 47147693 - 47147656
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  47147693 ctctataaatagagacttggttcatttgatttggacac 47147656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 50034712 - 50034675
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  50034712 ctctataaatagagacttggttcatttgatttggacac 50034675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 51436047 - 51436010
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||| |||||||||||||||||||    
T  51436047 ctctataaatagagacttagatcatttgatttggacac 51436010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 28410813 - 28410777
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||||    
T  28410813 tctataaatagagacttggttcatttgatttggacac 28410777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 35852893 - 35852929
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35852893 tctataaatagagacttggttcatttgatttggacac 35852929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 43023022 - 43022986
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43023022 tctataaatagagacttggttcatttgatttggacac 43022986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 6045028 - 6045067
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  6045028 aatcaagtttttcactctcttaatcttatcattagctttg 6045067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 6832983 - 6832948
Alignment:
Q  248 caagtttttcactctcttaatcttattgttagcttt 283  Q
    ||||||||||||||||||||||||||| ||||||||    
T  6832983 caagtttttcactctcttaatcttattattagcttt 6832948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Complemental strand, 6832983 - 6832952
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  6832983 caagtttttcactctcttaatcttattattag 6832952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Complemental strand, 7008481 - 7008450
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  7008481 caagtttttcactctcttaatcttattattag 7008450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 10424352 - 10424391
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  10424352 aatcaagtttttcactctcttaatcttatcattagctttg 10424391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 15493431 - 15493466
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggaca 235  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15493431 tctataaatagagacttggttcatttgatttggaca 15493466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 32120135 - 32120174
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  32120135 aatcaagttattcactctcttaatcttattattagctttg 32120174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Original strand, 35540268 - 35540299
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  35540268 caagtttttcactctcttaatcttattattag 35540299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Complemental strand, 43475786 - 43475755
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  43475786 caagtttttcactctcttaatcttattattag 43475755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 44084682 - 44084643
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  44084682 aatcaagttattcactctcttaatcttattattagctttg 44084643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 50734390 - 50734351
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  50734390 aatcaaatttttcactctcttaatcttattattagctttg 50734351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 50778465 - 50778504
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  50778465 aatcaaatttttcactctcttaatcttattattagctttg 50778504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 6048422 - 6048468
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  6048422 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 6048468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 10426156 - 10426202
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  10426156 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 10426202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 371
Target Start/End: Complemental strand, 12975203 - 12975173
Alignment:
Q  341 aatcaagtttttcactctcttaatcttatta 371  Q
    |||||||||||||||||||||||||||||||    
T  12975203 aatcaagtttttcactctcttaatcttatta 12975173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 29702029 - 29701995
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||| ||||||||    
T  29702029 aatcaagtttttcactctcttaatctcattattag 29701995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 30418156 - 30418202
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  30418156 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 30418202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 33187764 - 33187798
Alignment:
Q  202 tataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||    
T  33187764 tataaatagagacttggattatttgatttggacac 33187798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 46136968 - 46137002
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||| |||||||    
T  46136968 aatcaagtttttcactctcttaatctttttattag 46137002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 49407020 - 49407054
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||| |||||||||||||||||||    
T  49407020 aatcaagtttttcaccctcttaatcttattattag 49407054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 51304932 - 51304898
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  51304932 aatcaaatttttcactctcttaatcttattattag 51304898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 4046325 - 4046284
Alignment:
Q  397 ttgtctgttgtcttgcattttaagcaatttgtatgaccctta 438  Q
    |||| |||||||||||||||||||| |||||| |||||||||    
T  4046325 ttgtttgttgtcttgcattttaagctatttgtgtgaccctta 4046284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 6832957 - 6832896
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||| ||||| |||| | |||||||||||| |||  |||||||||    
T  6832957 tattagcttttcttttgaagtattagtctttactgagtgaaatggattccaataataatcaa 6832896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 6833034 - 6832997
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  6833034 ctctacaaatagagacttggatcatttgatttgaacac 6832997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 7520781 - 7520818
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| | |||||||||||||||    
T  7520781 ctctataaatagagacttggtttatttgatttggacac 7520818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 33751733 - 33751700
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttgg 232  Q
    |||||||||||||||||||| |||||||||||||    
T  33751733 ctctataaatagagacttggttcatttgatttgg 33751700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 35540217 - 35540254
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  35540217 ctctataaatagagacttggataatttgattttgacac 35540254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 36178134 - 36178171
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  36178134 ctctacaaatagaaacttggatcatttgatttggacac 36178171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 37410138 - 37410175
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  37410138 ctctataaatagagacttggttcatttaatttggacac 37410175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 49027075 - 49027104
Alignment:
Q  207 atagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||    
T  49027075 atagagacttggatcatttgatttggacac 49027104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 49356939 - 49356976
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  49356939 ctctttaaatagagacttggttcatttgatttggacac 49356976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 49822598 - 49822635
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  49822598 ctctataaatagaaacttggataatttgatttggacac 49822635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 50020415 - 50020378
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  50020415 ctctataaatagagacttggttcatttgatttgaacac 50020378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 51304980 - 51304943
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  51304980 ctctacaaatagaaacttggatcatttgatttggacac 51304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 15007617 - 15007581
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggaca 235  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  15007617 ctctataaataaagacttggatcttttgatttggaca 15007581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 26549895 - 26549931
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||| |||||||| |||||||||||||||||    
T  26549895 tctataaataaagacttggttcatttgatttggacac 26549931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 49146972 - 49147008
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||| |||| |||||||||||||||||    
T  49146972 tctataaatagagaattggttcatttgatttggacac 49147008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 49710155 - 49710191
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  49710155 tctataaatagagacttggttcatttgattttgacac 49710191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 53722911 - 53722875
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||| | |||||||||||||||||    
T  53722911 tctataaatagagactttgttcatttgatttggacac 53722875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 9e-71; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 202 - 407
Target Start/End: Complemental strand, 52773309 - 52773101
Alignment:
Q  202 tataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttctttt 300  Q
    |||||||||||||||| ||||||||||||||||||           |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  52773309 tataaatagagacttgaatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcatttctttt 52773210  T
Q  301 gaagttttagtgtttatttagtgaaatggatcccagaaataatcaagtttttcactctcttaatcttattattagatttgg--acacaaataaattactt 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  52773209 gaagttttagtgtttatttagtgaaatggatcccagaaataatcaagtttttcactctcttaatcttattattagatttggatacagaaataaattactt 52773110  T
Q  399 gtctgttgt 407  Q
     | ||||||    
T  52773109 ttgtgttgt 52773101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 8995175 - 8995039
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8995175 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttctt 8995076  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||||||||||    
T  8995075 ttgaagttttagtgtttatttagtgaaatggatccca 8995039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 34463189 - 34463325
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||||||| |||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34463189 ctctataaatagagacttggattatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttctt 34463288  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||||||||||    
T  34463289 ttgaagttttagtgtttatttagtgaaatggatccca 34463325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 3529908 - 3530045
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  3529908 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttct 3530007  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3530008 tttgaagttttagtgtttatttagtgaaatggatccca 3530045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 199 - 323
Target Start/End: Complemental strand, 16021261 - 16021137
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  16021261 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagatttgtattagcctttctt 16021162  T
Q  299 ttgaagttttagtgtttatttagtg 323  Q
    |||||||||||||||||||||||||    
T  16021161 ttgaagttttagtgtttatttagtg 16021137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 13113952 - 13113817
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||| ||||| ||||||||||||||| |||||||    
T  13113952 ctctataaatagagacttggatcatttgatttggacacagaaaaaaa-tcaagtatttcactctcttaatattattattagctttgtattagtctttctt 13113854  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||||||||||    
T  13113853 ttgaagttttagtgtttatttagtgaaatggatccca 13113817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 34198908 - 34199045
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    |||||| |||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  34198908 ctctattaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttct 34199007  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  34199008 tttgaagttttagtgcttatttagtgaaatggatccca 34199045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 55549703 - 55549824
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||||||| |||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  55549703 ctctataaatagagacttggataatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattaacctttctt 55549802  T
Q  299 ttgaagttttagtgtttattta 320  Q
    ||||||||||||||||||||||    
T  55549803 ttgaagttttagtgtttattta 55549824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 248 - 346
Target Start/End: Original strand, 23539371 - 23539469
Alignment:
Q  248 caagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||||    
T  23539371 caagtttttcactctcttaatcttattattagctttctattagcttttcttttgaagttttagtctttatttagtgaaatggatcccagtaacaatcaa 23539469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 40721431 - 40721311
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||| |||| |||||||||||||||||||          |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  40721431 ctctataaatagatactttgatcatttgatttggacacaaaaaaaaa-tcaagtttttcactctcttaatcttatcattagctttgtattagcctttctt 40721333  T
Q  299 ttgaagttttagtgtttattta 320  Q
    ||||||||||||||||||||||    
T  40721332 ttgaagttttagtgtttattta 40721311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 56054669 - 56054538
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||| |||||||| ||||    ||||||    
T  56054669 ctctataaatagagacttggatcatttgatttggacacagaaaaaaac-caagtttttcactctcttaatcttattattagctttctatt----tttctt 56054575  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||| |||||||||||||||||||||||    
T  56054574 ttgaagttttagtttttatttagtgaaatggatccca 56054538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 52773476 - 52773402
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  52773476 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacatagacacttggcatgttttgattggctgctcg 52773402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 199 - 327
Target Start/End: Complemental strand, 28901538 - 28901408
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt--caagtttttcactctcttaatcttattgttagctttgtattagcctttc 296  Q
    ||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||| |||||||| ||||||  ||||    
T  28901538 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaccaagtttttcactctcttaatcttattattagctttctattagtttttc 28901439  T
Q  297 ttttgaagttttagtgtttatttagtgaaat 327  Q
    ||||||||||||||| |||||||||||||||    
T  28901438 ttttgaagttttagtctttatttagtgaaat 28901408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 199 - 332
Target Start/End: Original strand, 33077508 - 33077643
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattag--cctttc 296  Q
    ||||||||||| ||||||||||||||||||||||||||          |||| ||||||||||||||||||||||| |||||||||||||||    |||     
T  33077508 ctctataaataaagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagtttttttt 33077607  T
Q  297 ttttgaagttttagtgtttatttagtgaaatggatc 332  Q
    |||||||||||| || ||||||||||||||||||||    
T  33077608 ttttgaagttttggtctttatttagtgaaatggatc 33077643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 31336182 - 31336312
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt---caagtttttcactctcttaatcttattgttagctttgtattagccttt 295  Q
    ||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||| | |||||||| ||||||  |||    
T  31336182 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaaccaagtttttcactctcttaatcttagtattagctttctattagttttt 31336281  T
Q  296 cttttgaagttttagtgtttatttagtgaaa 326  Q
    |||||||||||||||| ||||||||||||||    
T  31336282 cttttgaagttttagtctttatttagtgaaa 31336312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 16021431 - 16021377
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 84  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16021431 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacagagacacttggc 16021377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 55549540 - 55549614
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcg 104  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||| |||||||    
T  55549540 ggaattgttgaaacaattcaacatgttgaatgtctggcccacggagacacttggcgtgcgttgattgactgctcg 55549614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 38173960 - 38173877
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagcttt 283  Q
    |||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| ||||||||    
T  38173960 tctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagcttt 38173877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 28901306 - 28901240
Alignment:
Q  268 tcttattgttagctttgtattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  28901306 tcttattattagctttctattagc-tttcttttgaagttttagtctttatttagtgaaatggatccca 28901240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 52018227 - 52018161
Alignment:
Q  34 gtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgct 102  Q
    ||||||||  |||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  52018227 gtgttgaacaaattcaacatgttgaaagcctggcccac--agacacttggcatgttttgattggctgct 52018161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 48506245 - 48506359
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||| ||||| ||| |||| ||||||| ||| |    
T  48506245 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagcttttat 48506344  T
Q  298 tttgaagttttagtg 312  Q
    ||| |||||||||||    
T  48506345 tttaaagttttagtg 48506359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 27864324 - 27864188
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||           |||||| ||||||    
T  27864324 ctctacaaatagaaacttggatcatttgatttggacacacaaaaaaaatcaaatttttcactctcttaatcttatt-----------attagcatttctt 27864236  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||| ||||||||||||  |||||||||    
T  27864235 ttgaagttttagtctttgtttagtaaaatggatcccaataataatcaa 27864188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 53347415 - 53347465
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  53347415 tattagcatttcttttgaagttttagtctttatttagtgaaatggatccca 53347465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 34434277 - 34434330
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  34434277 tttcttttgaagttttagtctttatttagtgaaatggatcccaataataatcaa 34434330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 4982004 - 4981944
Alignment:
Q  286 attagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  4982004 attagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 4981944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 16171623 - 16171671
Alignment:
Q  287 ttagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  16171623 ttagcatttcttttgaagttttagtatttatttagtgaaatggatccca 16171671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 16021215 - 16021176
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16021215 aatcaagtttttcactctcttaatcttattattagatttg 16021176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 35809810 - 35809674
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||           |||||| ||||||    
T  35809810 ctctacaaatagaaacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttatt-----------attagcatttctt 35809722  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||| | ||||||||||||  |||||||||    
T  35809721 ttgaagttttagtctttgtttaataaaatggatcccaataataatcaa 35809674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 3614975 - 3615025
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  3614975 tattagcatttcttttgaagttttagtctttaattagtgaaatggatccca 3615025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 3614899 - 3614936
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3614899 ctctataaatagagacttggatcatttgatttggacac 3614936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 16171542 - 16171579
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16171542 ctctataaatagagacttggatcatttgatttggacac 16171579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 21654502 - 21654539
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21654502 ctctataaatagagacttggatcatttgatttggacac 21654539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 31848453 - 31848490
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31848453 ctctataaatagagacttggatcatttgatttggacac 31848490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 38174122 - 38174054
Alignment:
Q  34 gtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgct 102  Q
    ||||||||  |||||||||||||||| || |||||||| ||||||| || ||||||||||||| |||||    
T  38174122 gtgttgaacaaattcaacatgttgaaagcttggcccacagagacacctgacatgttttgattgactgct 38174054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 345
Target Start/End: Original strand, 39048704 - 39048850
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttt 299  Q
    ||||||||||||||||||| |||||||||||||| ||           ||||||||||||| ||||||||||||  |||  ||| ||||||  |||||||    
T  39048704 tctataaatagagacttggttcatttgatttggatacagaaaaaaaaccaagtttttcactatcttaatcttatcattatatttttattagattttcttt 39048803  T
Q  300 tgaagttttagtgtt-tatttagtgaaatggatcccagaaataatca 345  Q
    ||||||||||   || | |||||||||||||||| ||  ||||||||    
T  39048804 tgaagttttaaacttctttttagtgaaatggatctcaataataatca 39048850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 19273334 - 19273198
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||           ||| || ||||||    
T  19273334 ctctacaaatagaaacttggatcatttgatttggacacagaataaaaatcaaatttttcactctcttaatcttatt-----------atttgcatttctt 19273246  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||| ||||| ||||||  |||||||||    
T  19273245 ttgaagttttagtttttgtttagtaaaatgaatcccaataataatcaa 19273198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 33607427 - 33607291
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||| |||||||||||||||||||           ||||||||||||| |||||||||||||           |  ||| ||||||    
T  33607427 ctctataaatagagactttgatcatttgatttggacacagaaaaaaaaacaagtttttcactatcttaatcttatt-----------aaaagcatttctt 33607339  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||| ||  |||||||||    
T  33607338 ttgaagttttagtctttgtttagtgaaatggatctcaataataatcaa 33607291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 34463235 - 34463274
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  34463235 aatcaagtttttcactctcttaatcttattattagctttg 34463274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 326
Target Start/End: Original strand, 39113483 - 39113562
Alignment:
Q  247 tcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtttatttagtgaaa 326  Q
    |||||| ||||| | |||||||||| || ||| |||| ||||||| ||||||||||||||||| | ||| ||||||||||    
T  39113483 tcaagtgtttcaatatcttaatcttgttattatctttctattagcttttcttttgaagttttaatctttttttagtgaaa 39113562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 55549749 - 55549788
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  55549749 aatcaagtttttcactctcttaatcttattattagctttg 55549788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 13114148 - 13114102
Alignment:
Q  31 gaagtgttgaaacaattcaacatgttgaatgcctggcccacggagac 77  Q
    ||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  13114148 gaagtgttgaatcaattcaacatgttgaaagcctggcccacagagac 13114102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 38173915 - 38173881
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||||||||||||    
T  38173915 aatcaagtttttcactctcttaatcttattattag 38173881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 40596414 - 40596506
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagc 291  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| |||| |||||||| ||| |||| |||||||    
T  40596414 ctctataaatagagacttggttcatttgatttggacacaggaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagc 40596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 2211996 - 2212033
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  2211996 ctctataaatagagacttggttcatttgatttggacac 2212033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 13093890 - 13093951
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||| | ||||||||||||  |||||||||    
T  13093890 tattagcatttcttttgaagttttagtctttgtttaataaaatggatcccaataataatcaa 13093951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 17329554 - 17329591
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  17329554 ctctacaaatagagacttggatcatttgatttggacac 17329591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 17329632 - 17329693
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||| |||| |  |||||||||    
T  17329632 tattagcatttcttttgaagttttagtctttgtttagtgaaatgaatccaaataataatcaa 17329693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 23389622 - 23389659
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  23389622 ctctacaaatagagacttggatcatttgatttggacac 23389659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 28447646 - 28447609
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  28447646 ctctataaatagagacttgaatcatttgatttggacac 28447609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 45081128 - 45081165
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||| |||||||||||||||||||    
T  45081128 ctctataaatagagactttgatcatttgatttggacac 45081165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 45081214 - 45081255
Alignment:
Q  294 ttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  45081214 ttcttttgaagttttagtctttgtttagtgaaatggatccca 45081255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 46914190 - 46914227
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  46914190 ctctataaatagagacttggttcatttgatttggacac 46914227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 53181132 - 53181169
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||| |||||||||||||||||||    
T  53181132 ctctataaatagagactttgatcatttgatttggacac 53181169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 55598 - 55634
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||||    
T  55598 tctataaatagagacttggttcatttgatttggacac 55634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 55408218 - 55408254
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||||    
T  55408218 tctataaatagagacttggttcatttgatttggacac 55408254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 3529955 - 3529994
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  3529955 aatcaagtttttcactctcttaatcttatcattagctttg 3529994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 8995129 - 8995090
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  8995129 aatcaagtttttcactctcttaatcttatcattagctttg 8995090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 18469081 - 18469128
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatc 332  Q
    ||||||| |||||||| |||||||||| ||| ||||||||||||||||    
T  18469081 tattagcatttcttttaaagttttagtctttgtttagtgaaatggatc 18469128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 19409902 - 19409809
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagc 291  Q
    ||||| |||||||||||||| |||||||||||||||||           |||||||||||||| ||||||||||||| ||| |||| |||||||    
T  19409902 ctctagaaatagagacttggttcatttgatttggacacaaaaaaaaaaatcaagtttttcactatcttaatcttattattatctttctattagc 19409809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Original strand, 23539371 - 23539402
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  23539371 caagtttttcactctcttaatcttattattag 23539402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Complemental strand, 28901487 - 28901456
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  28901487 caagtttttcactctcttaatcttattattag 28901456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 33077554 - 33077593
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  33077554 aatcaaatttttcactctcttaatcttattattagctttg 33077593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 34198955 - 34198994
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  34198955 aatcaagtttttcactctcttaatcttatcattagctttg 34198994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 40721386 - 40721347
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  40721386 aatcaagtttttcactctcttaatcttatcattagctttg 40721347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 236
Target Start/End: Original strand, 53347344 - 53347375
Alignment:
Q  205 aaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||    
T  53347344 aaatagagacttggatcatttgatttggacac 53347375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Original strand, 53347389 - 53347420
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  53347389 caagtttttcactctcttaatcttattattag 53347420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Complemental strand, 56054621 - 56054590
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  56054621 caagtttttcactctcttaatcttattattag 56054590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 3533035 - 3533081
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  3533035 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 3533081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 3618180 - 3618226
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  3618180 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 3618226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 8992129 - 8992083
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  8992129 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 8992083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 12159163 - 12159129
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttgga 233  Q
    |||||||||||||||||||| ||||||||||||||    
T  12159163 ctctataaatagagacttggttcatttgatttgga 12159129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 13093861 - 13093895
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  13093861 aatcaaatttttcactctcttaatcttattattag 13093895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 13110907 - 13110861
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  13110907 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 13110861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 236
Target Start/End: Original strand, 18469011 - 18469041
Alignment:
Q  206 aatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||||||||||||    
T  18469011 aatagagacttggatcatttgatttggacac 18469041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 27864278 - 27864244
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  27864278 aatcaaatttttcactctcttaatcttattattag 27864244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 35809764 - 35809730
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  35809764 aatcaaatttttcactctcttaatcttattattag 35809730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 48403559 - 48403593
Alignment:
Q  202 tataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||| ||||||||||||||||||    
T  48403559 tataaatagagacttgaatcatttgatttggacac 48403593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 7401600 - 7401563
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  7401600 ctctataaattgagacttggttcatttgatttggacac 7401563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 374
Target Start/End: Complemental strand, 19409855 - 19409822
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatta 374  Q
    |||||||||||||||| |||||||||||||||||    
T  19409855 aatcaagtttttcactatcttaatcttattatta 19409822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 23539321 - 23539358
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  23539321 ctctataaatagagacttggattatttgatttgaacac 23539358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 33527115 - 33527082
Alignment:
Q  200 tctataaatagagacttggatcatttgatttgga 233  Q
    ||||||||||||||||||| ||||||||||||||    
T  33527115 tctataaatagagacttggttcatttgatttgga 33527082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 34434196 - 34434233
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  34434196 ctctacaaatagagactttgatcatttgatttggacac 34434233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 36658862 - 36658825
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  36658862 ctctataaatagagatttggttcatttgatttggacac 36658825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 47749732 - 47749765
Alignment:
Q  203 ataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||| |||||||||||||||||    
T  47749732 ataaatagagacttggttcatttgatttggacac 47749765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 48403637 - 48403690
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||||||| | | |||||| ||||||||||||  |||||||||    
T  48403637 tttcttttgaagttttagtctctgtttagtaaaatggatcccaataataatcaa 48403690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 10090174 - 10090138
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggaca 235  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  10090174 ctctacaaatagagacttggttcatttgatttggaca 10090138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 19273288 - 19273256
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatt 373  Q
    |||||| ||||||||||||||||||||||||||    
T  19273288 aatcaaatttttcactctcttaatcttattatt 19273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 21047596 - 21047632
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||| |||| |||||||||||||||||    
T  21047596 tctataaatagagatttggttcatttgatttggacac 21047632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 39113432 - 39113468
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||| |||||||| |||||||||||||||||    
T  39113432 tctataaatatagacttggttcatttgatttggacac 39113468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 52773091 - 52773051
Alignment:
Q  402 tgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    |||||||||||||||||||| ||||||  ||||||||||||    
T  52773091 tgttgtcttgcattttaagctatttgtgcgacccttactta 52773051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 1e-48; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 28317733 - 28317869
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28317733 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttctt 28317832  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||||||||||||||||||| |||||    
T  28317833 ttgaagttttagtgtttatttagtgaaatgggtccca 28317869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 42882024 - 42881888
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  42882024 ctctataaatagagatttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttctt 42881925  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||||||||||    
T  42881924 ttgaagttttagtgtttatttagtgaaatggatccca 42881888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 206 - 335
Target Start/End: Complemental strand, 22660296 - 22660167
Alignment:
Q  206 aatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagt 305  Q
    |||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  22660296 aatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcttttcttttgaagt 22660197  T
Q  306 tttagtgtttatttagtgaaatggatccca 335  Q
    |||||| |||||||||||||||||||||||    
T  22660196 tttagtatttatttagtgaaatggatccca 22660167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 199 - 332
Target Start/End: Original strand, 40300585 - 40300718
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  40300585 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcattctcttaatcttattattagctttgtattagcttttctt 40300684  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatc 332  Q
    ||||||||||||| ||||||||||||||||||||    
T  40300685 ttgaagttttagtatttatttagtgaaatggatc 40300718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 47159061 - 47159198
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||| |||||||||| |||||||           |||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  47159061 ctctataaatagagacttgaatcatttgatgtggacacagaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttct 47159160  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  47159161 tttgaagttttagtgtttattcagtgaaatggatccca 47159198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 30720539 - 30720417
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||| |||||||||||||||||||          ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  30720539 ctctataaatagagacttagatcatttgatttggacacagaaaaaaa-tcaagtttttcacactcttaatcttattattagctttgtattagcctttctt 30720441  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  30720440 ttgaagttttagtgtttatttagt 30720417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 33078456 - 33078593
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt-caagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    |||||||||||||||||| |||||||||||||||||||            ||||||||||| ||||||||||||||| |||||||| ||||||  |||||    
T  33078456 ctctataaatagagactttgatcatttgatttggacacagaaaaaaaaaacaagtttttcattctcttaatcttattattagctttctattagtttttct 33078555  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||| |||||||||||||||||||||||    
T  33078556 tttgaagttttagtctttatttagtgaaatggatccca 33078593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 33508254 - 33508388
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||| ||| ||||||||| ||| ||||  |||| | ||||||    
T  33508254 ctctataaatagagacttggatcatttgatttggacacagaaaaaaa-tcaagtttttcactttct-aatcttattattaactttccattaacttttctt 33508351  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||| |||||||||||||||||||||||    
T  33508352 ttgaagttttagtctttatttagtgaaatggatccca 33508388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 30566993 - 30566909
Alignment:
Q  248 caagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtttatttagtgaaatggatc 332  Q
    ||||||||| ||||||||||||||||| |||||||| ||||| | ||||||||||||||||||| |||||||| |||||||||||    
T  30566993 caagtttttaactctcttaatcttattattagctttctattaacttttcttttgaagttttagtctttatttaatgaaatggatc 30566909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 115094 - 114958
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||| |||||||||| ||||||||          |||||||||||||||||||||||||||| ||||||||           ||||    
T  115094 ctctataaatagagacttagatcatttgacttggacacaggaaaaaaatcaagtttttcactctcttaatcttattattagcttt-----------tctt 115006  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||    
T  115005 ttgaagttttagtctttatttagtgaaatggatcccaataataatcaa 114958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 30720707 - 30720653
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720707 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 30720653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 38970470 - 38970332
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt--caagtttttcactctcttaatcttattgttagctttgtattagcctttc 296  Q
    ||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||| ||||||||           ||    
T  38970470 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaacaagtttttcactctcttaatcttattattagcttt-----------tc 38970382  T
Q  297 ttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||| |||||||||||||||||||| ||  |||||||||    
T  38970381 ttttgaagttttagtctttatttagtgaaatggatctcaataataatcaa 38970332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 26815544 - 26815407
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           |||  ||||||||||||||||||||||            ||||||||||||    
T  26815544 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcatatttttcactctcttaatcttat-----------aattagcctttct 26815456  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    |||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  26815455 tttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 26815407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 37952196 - 37952071
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||| ||||||||||||||||||          |||   ||||||||||||||||||||||           |||||| ||||||    
T  37952196 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaatcataattttcactctcttaatcttatt-----------attagcatttctt 37952108  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37952107 ttgaagttttagtctttatttagtgaaatggatccca 37952071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 40690667 - 40690607
Alignment:
Q  286 attagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  40690667 attagcatttcttttgaagttttagtctttatttagtgaaatggatcccaataataatcaa 40690607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 335
Target Start/End: Original strand, 35192757 - 35192893
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttt 299  Q
    ||||||||||||||||||| | ||||||||||||| |           ||||||||||||| ||||||||||||| ||| |||| || || |||||||||    
T  35192757 tctataaatagagacttggtttatttgatttggactcagaaaaaaaaccaagtttttcactatcttaatcttattattatctttctagtaacctttcttt 35192856  T
Q  300 tgaagttttagtgtt-tatttagtgaaatggatccca 335  Q
    ||||||||||   || | |||||||||||||||||||    
T  35192857 tgaagttttaaacttctttttagtgaaatggatccca 35192893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 20354602 - 20354541
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  20354602 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 20354541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 32126980 - 32127040
Alignment:
Q  286 attagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  32126980 attagccattcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 32127040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 32749295 - 32749235
Alignment:
Q  286 attagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  32749295 attagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 32749235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 36521841 - 36521791
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  36521841 tattagcatttcttttgaagttttagtctttaattagtgaaatggatccca 36521791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 30630287 - 30630324
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30630287 ctctataaatagagacttggatcatttgatttggacac 30630324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 48985303 - 48985266
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48985303 ctctataaatagagacttggatcatttgatttggacac 48985266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 22660257 - 22660218
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  22660257 aatcaagtttttcactctcttaatcttattattagctttg 22660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 28317779 - 28317818
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  28317779 aatcaagtttttcactctcttaatcttattattagctttg 28317818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 45549041 - 45549177
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||| | ||||||||||||||||||||||          |||| |||||||||||||||||||||||           |||| | ||||||    
T  45549041 ctctacaaatagaaatttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttatt-----------attatcatttctt 45549129  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||| ||||||||||||  |||||||||    
T  45549130 ttgaagttttagtctttgtttagtaaaatggatcccaataataatcaa 45549177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 115048 - 115014
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||||||||||||    
T  115048 aatcaagtttttcactctcttaatcttattattag 115014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 36521914 - 36521880
Alignment:
Q  202 tataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||||||||||||||||    
T  36521914 tataaatagagacttggatcatttgatttggacac 36521880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 39770071 - 39770025
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggat 331  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  39770071 tattagcatttcttttgaagttttagtctttgtttagtgaaatggat 39770025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 5813698 - 5813661
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5813698 ctctataaatagagacttggttcatttgatttggacac 5813661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 32126903 - 32126940
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  32126903 ctctacaaatagagacttggatcatttgatttggacac 32126940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 32749372 - 32749335
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  32749372 ctctataaatagagacttggaacatttgatttggacac 32749335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 33379705 - 33379668
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  33379705 ctctataaatagagacttggttcatttgatttggacac 33379668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 35028472 - 35028509
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  35028472 ctctataaatagagacttggttcatttgatttggacac 35028509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 37888800 - 37888763
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37888800 ctctataaatagagacttggttcatttgatttggacac 37888763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 38351958 - 38351897
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| |||||||| |||||||||| ||| |||| ||||||||||||||  |||||||||    
T  38351958 tattagcatttcttttaaagttttagtctttgtttaatgaaatggatcccaataataatcaa 38351897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 39770149 - 39770112
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||| |||||||||||||||||||    
T  39770149 ctctataaatagagacttagatcatttgatttggacac 39770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 40690742 - 40690709
Alignment:
Q  203 ataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||    
T  40690742 ataaatagagacttggatcatttgatttggacac 40690709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 43201665 - 43201726
Alignment:
Q  285 tattagcctttcttttgaagttttagt-gtttatttagtgaaatggatcccagaaataatca 345  Q
    ||||||| |||||||||||||||||||  ||| |||||||||||||||||||  ||||||||    
T  43201665 tattagcttttcttttgaagttttagtcatttttttagtgaaatggatcccaataataatca 43201726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 22194651 - 22194615
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22194651 tctataaataaagacttggatcatttgatttggacac 22194615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 43570795 - 43570831
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43570795 tctataaatagagacttggttcatttgatttggacac 43570831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 30720494 - 30720455
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  30720494 aatcaagtttttcacactcttaatcttattattagctttg 30720455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Complemental strand, 38970419 - 38970388
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  38970419 caagtttttcactctcttaatcttattattag 38970388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 40300631 - 40300670
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  40300631 aatcaagtttttcattctcttaatcttattattagctttg 40300670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 42881978 - 42881939
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  42881978 aatcaagtttttcactctcttaatcttatcattagctttg 42881939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 47159108 - 47159147
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  47159108 aatcaagtttttcactctcttaatcttatcattagctttg 47159147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 22657017 - 22656971
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  22657017 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 22656971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 24793856 - 24793819
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| || ||||||||||||||    
T  24793856 ctctataaatagagacttggttcgtttgatttggacac 24793819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 25038245 - 25038278
Alignment:
Q  200 tctataaatagagacttggatcatttgatttgga 233  Q
    ||||||||||||||||||| ||||||||||||||    
T  25038245 tctataaatagagacttggttcatttgatttgga 25038278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 25217942 - 25217979
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  25217942 ctctataaatagagatttggttcatttgatttggacac 25217979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 37888259 - 37888222
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||| || |||||||||||||||||||    
T  37888259 ctctataaatagagatttagatcatttgatttggacac 37888222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 374
Target Start/End: Original strand, 45549087 - 45549120
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatta 374  Q
    |||||| |||||||||||||||||||||||||||    
T  45549087 aatcaaatttttcactctcttaatcttattatta 45549120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 48384829 - 48384965
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||||||||||||||||||||| |          |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  48384829 ctctataaatagagacttggatcatttgatttggacgcagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagcctttctt 48384928  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||||||||||    
T  48384929 ttgaagttttagtgtttatttagtgaaatggatccca 48384965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 45623181 - 45623304
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45623181 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttctt 45623280  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  45623281 ttgaagttttagtgtttatttagt 45623304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 207 - 335
Target Start/End: Complemental strand, 31159844 - 31159717
Alignment:
Q  207 atagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagtt 306  Q
    ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  31159844 atagagacttggatcatttgatttggacacagaaaaaaa-tcaagtttttcactctcttaatcttattattagctttgtattagcatttcttttgaagtt 31159746  T
Q  307 ttagtgtttatttagtgaaatggatccca 335  Q
    |||||||||||||||||||||||||||||    
T  31159745 ttagtgtttatttagtgaaatggatccca 31159717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 51494124 - 51494247
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  51494124 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagttttgtattagcctttctt 51494223  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  51494224 ttgaagttttagtgtttatttagt 51494247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 37690946 - 37691068
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37690946 ctctataaatagagacttggatcatttgatttggacacagaaaaaaa-tcaagtttttcactctcttaatcttattattagctttgtattagcctttctt 37691044  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  37691045 ttgaagttttagtgtttatttagt 37691068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 29919789 - 29919666
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||| ||||          |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  29919789 ctctataaatagagacttggatcatttgatttgaacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagcctttctt 29919690  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  29919689 ttgaagttttagtgtttatttagt 29919666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 199 - 333
Target Start/End: Original strand, 17675995 - 17676128
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||           ||| ||||||||||||||||||||||| ||||||||  |||||| ||||||    
T  17675995 ctctataaatagagacttggatcatttgatttggacacaaaaaaaaac-caaatttttcactctcttaatcttattattagctttccattagcttttctt 17676093  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcc 333  Q
    ||||||||||||| |||||||||||||||||||||    
T  17676094 ttgaagttttagtctttatttagtgaaatggatcc 17676128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 19578562 - 19578687
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt--caagtttttcactctcttaatcttattgttagctttgtattagcctttc 296  Q
    ||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  19578562 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaccaagtttttcactctcttaatcttattattagttttgtattagcctttc 19578661  T
Q  297 ttttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||||    
T  19578662 ttttgaagttttagtgtttatttagt 19578687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 14097109 - 14096984
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn--tcaagtttttcactctcttaatcttattgttagctttgtattagcctttc 296  Q
    |||||||||||||||||| ||| |||||||||||||||            |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14097109 ctctataaatagagactttgattatttgatttggacacagaaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttc 14097010  T
Q  297 ttttgaagttttagtgtttatttagt 322  Q
    |||||||||||||||||| |||||||    
T  14097009 ttttgaagttttagtgttaatttagt 14096984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 10265684 - 10265805
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          ||||  |||||||||||||||||||||| |||||||| ||||||| ||||||    
T  10265684 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaaaattttcactctcttaatcttattattagctttctattagcttttctt 10265783  T
Q  299 ttgaagttttagtgtttattta 320  Q
    ||||||||||||| ||||||||    
T  10265784 ttgaagttttagtctttattta 10265805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 48407792 - 48407654
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn--tcaagtttttcactctcttaatcttattgttagctttgtattagcctttc 296  Q
    ||||||||||||||||||| ||||||||||||| ||||            |||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  48407792 ctctataaatagagacttgaatcatttgatttgaacacagaaaaaaaaaatcaagtttttcactctcttaatcttattattaactttgtattagcttttc 48407693  T
Q  297 ttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||| |||||||||||||| || |||||    
T  48407692 ttttgaagttttagtctttatttagtgaaacgggtccca 48407654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 45623012 - 45623087
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |   |||||||||||||||    
T  45623012 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcgg 45623087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 51493954 - 51494029
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||| ||||||||    
T  51493954 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcgcgtgctgattgactgctcgg 51494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 29919951 - 29919897
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29919951 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 29919897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 37690779 - 37690833
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37690779 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 37690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 14097278 - 14097224
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 84  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14097278 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacagagacacttggc 14097224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 43739451 - 43739367
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagcttt 283  Q
    ||||||||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||| ||||||||    
T  43739451 ctctataaatagagacttgaatcatttgatttggacacaggaaaaaaatcaagtttttcactctcttaatcttattattagcttt 43739367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 51523616 - 51523550
Alignment:
Q  280 ctttgtattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    |||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  51523616 ctttttattagcttttcttttgaagttttagtctttatttagtgaaatggatcccaataataatcaa 51523550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 33167635 - 33167510
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||| ||||||||||||||||||          |||| |||||||||||||||||||||||           |||| | ||||||    
T  33167635 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttatt-----------attaacatttctt 33167547  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  33167546 ttgaagttttagtctttgtttagtgaaatggatccca 33167510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 8471633 - 8471509
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntc-aagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           | || |||||||||||||||||||||||           |||||| |||||    
T  8471633 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaaatttttcactctcttaatcttatt-----------attagcatttct 8471545  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatcc 333  Q
    |||||||||||||| |||||||||||||||||||||    
T  8471544 tttgaagttttagtctttatttagtgaaatggatcc 8471509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 51156335 - 51156471
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          |||  ||||||||||||||||||||||            |||||| ||||||    
T  51156335 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcatatttttcactctcttaatcttat-----------aattagcatttctt 51156423  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||| ||  |||||||||    
T  51156424 ttgaagttttagtctttgtttagtgaaatggatctcaataataatcaa 51156471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 30878290 - 30878419
Alignment:
Q  205 aaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaag 304  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||| |||| |||           ||||||||||    
T  30878290 aaatagagacttggatcatttgatttggacacagaaaaaaac-caagtttttcactctcttaatcttattattagattt-----------tcttttgaag 30878377  T
Q  305 ttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| |||| ||||||||||||||||||  |||||||||    
T  30878378 ttttagtctttacttagtgaaatggatcccaataataatcaa 30878419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 345
Target Start/End: Complemental strand, 36303514 - 36303368
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||| ||||||| |||||| ||||||||||          |||||||||||||| ||||||||||||| ||| | || ||||||  ||||||    
T  36303514 ctctataaatag-gacttggttcatttaatttggacacataaaaaaaatcaagtttttcactatcttaatcttattattatccttctattagtttttctt 36303416  T
Q  299 ttgaagttttagtgtt-tatttagtgaaatggatcccagaaataatca 345  Q
    |||||||||||   || | |||||||||||||||||||  ||||||||    
T  36303415 ttgaagttttaaacttctttttagtgaaatggatcccaataataatca 36303368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 41542680 - 41542603
Alignment:
Q  247 tcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtttatttagtga 324  Q
    |||||||||||||| ||||||| | ||| ||| |||| ||||||| ||||||||||||||||||| ||| ||||||||    
T  41542680 tcaagtttttcactatcttaatatcattattatctttctattagcttttcttttgaagttttagtttttttttagtga 41542603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 45455631 - 45455692
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  45455631 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 45455692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 2474850 - 2474900
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  2474850 tattagcatttcttttgaagttttagtctttaattagtgaaatggatccca 2474900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 36231251 - 36231209
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  36231251 tttcttttgaagttttagtctttatttagtgaaatggatccca 36231209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 45363823 - 45363773
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  45363823 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatccca 45363773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 643502 - 643539
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  643502 ctctataaatagagacttggatcatttgatttggacac 643539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 2474774 - 2474811
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2474774 ctctataaatagagacttggatcatttgatttggacac 2474811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 37823022 - 37822901
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||           |||||| ||||||    
T  37823022 ctctacaaatagagacttggatcatttgatttggacacaaaaaaaaac-caaatttttcactctcttaatcttatt-----------attagcatttctt 37822935  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatc 332  Q
    ||||||||||||| ||| ||||||||||||||||    
T  37822934 ttgaagttttagtctttgtttagtgaaatggatc 37822901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 45242472 - 45242435
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45242472 ctctataaatagagacttggatcatttgatttggacac 45242435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 14097061 - 14097022
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  14097061 aatcaagtttttcactctcttaatcttattattagctttg 14097022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 379
Target Start/End: Original strand, 30878332 - 30878367
Alignment:
Q  344 caagtttttcactctcttaatcttattattagattt 379  Q
    ||||||||||||||||||||||||||||||||||||    
T  30878332 caagtttttcactctcttaatcttattattagattt 30878367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 31159807 - 31159768
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  31159807 aatcaagtttttcactctcttaatcttattattagctttg 31159768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 37690991 - 37691030
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  37690991 aatcaagtttttcactctcttaatcttattattagctttg 37691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 45623227 - 45623266
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  45623227 aatcaagtttttcactctcttaatcttattattagctttg 45623266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 47297317 - 47297364
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatc 332  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  47297317 tattagcttttcttttgaagttttagtctttattcagtgaaatggatc 47297364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 48729807 - 48729708
Alignment:
Q  247 tcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtt-tatttagtgaaatggatcccagaaataatca 345  Q
    |||||||||||||| ||||||||||||  ||| | || ||||||  |||||||||||||||||   || | |||||||||||||||||||  ||||||||    
T  48729807 tcaagtttttcactatcttaatcttatcattatccttctattagtttttcttttgaagttttaaacttctttttagtgaaatggatcccaataataatca 48729708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 51494170 - 51494209
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  51494170 aatcaagtttttcactctcttaatcttattattagttttg 51494209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 36231341 - 36231307
Alignment:
Q  202 tataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||||||||||||||||    
T  36231341 tataaatagagacttggatcatttgatttggacac 36231307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 43739405 - 43739371
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||||||||||||    
T  43739405 aatcaagtttttcactctcttaatcttattattag 43739371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 326
Target Start/End: Original strand, 3754760 - 3754833
Alignment:
Q  253 ttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtttatttagtgaaa 326  Q
    |||||||| |||||||||| || ||| |||| ||||||  ||||||||||||||||| | ||| ||||||||||    
T  3754760 ttttcactatcttaatcttgttattatctttctattagtttttcttttgaagttttaatatttttttagtgaaa 3754833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 8464987 - 8464950
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8464987 ctctataaatagagacttggttcatttgatttggacac 8464950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 27629992 - 27630029
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  27629992 ctctataaatagagacttggttcatttgatttggacac 27630029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 29524245 - 29524184
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||| | ||| |||||||||||| ||||||  |||||||||    
T  29524245 tattagcatttcttttgaagttttaatctttgtttagtgaaatgtatcccaataataatcaa 29524184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 29524324 - 29524287
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  29524324 ctctacaaatagagacttggatcatttgatttggacac 29524287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 31471608 - 31471571
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  31471608 ctctataaatagagacttggttcatttgatttggacac 31471571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 37419876 - 37419913
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37419876 ctctataaatagagacttggttcatttgatttggacac 37419913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 45363901 - 45363864
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  45363901 ctctacaaatagagacttggatcatttgatttggacac 45363864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 374
Target Start/End: Complemental strand, 48407744 - 48407711
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatta 374  Q
    ||||||||||||||||||||||||||||||||||    
T  48407744 aatcaagtttttcactctcttaatcttattatta 48407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 51523687 - 51523650
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||||||||||||| |||||    
T  51523687 ctctataaatagagacttggatcatttgatttagacac 51523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 19578613 - 19578649
Alignment:
Q  344 caagtttttcactctcttaatcttattattagatttg 380  Q
    |||||||||||||||||||||||||||||||| ||||    
T  19578613 caagtttttcactctcttaatcttattattagttttg 19578649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 37646089 - 37646125
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggaca 235  Q
    |||||||||||||||||||| ||||||||||||||||    
T  37646089 ctctataaatagagacttggttcatttgatttggaca 37646125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 44450917 - 44450953
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggaca 235  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44450917 ctctataaatagagacttggttcatttgatttggaca 44450953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 44651495 - 44651459
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggaca 235  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44651495 ctctataaatagagacttggttcatttgatttggaca 44651459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 29919743 - 29919704
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  29919743 aatcaaatttttcactctcttaatcttattattagctttg 29919704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 375
Target Start/End: Complemental strand, 36231285 - 36231254
Alignment:
Q  344 caagtttttcactctcttaatcttattattag 375  Q
    ||||||||||||||||||||||||||||||||    
T  36231285 caagtttttcactctcttaatcttattattag 36231254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 48384875 - 48384914
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  48384875 aatcaagtttttcactctcttaatcttatcattagctttg 48384914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 2478055 - 2478101
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  2478055 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 2478101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 23093109 - 23093063
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  23093109 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 23093063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 45239481 - 45239435
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  45239481 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 45239435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 48387834 - 48387880
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  48387834 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 48387880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 17786666 - 17786629
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  17786666 ctctataaatagagacttggttcatttgatttgtacac 17786629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 374
Target Start/End: Complemental strand, 33167589 - 33167556
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatta 374  Q
    |||||| |||||||||||||||||||||||||||    
T  33167589 aatcaaatttttcactctcttaatcttattatta 33167556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 374
Target Start/End: Complemental strand, 36303469 - 36303436
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatta 374  Q
    |||||||||||||||| |||||||||||||||||    
T  36303469 aatcaagtttttcactatcttaatcttattatta 36303436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 52930344 - 52930381
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  52930344 ctctataaatagagacttggttcatttgatttgaacac 52930381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 3754708 - 3754744
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||| |||| |||||||||||||||||    
T  3754708 tctataaatagagaattggttcatttgatttggacac 3754744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 20584473 - 20584509
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  20584473 tctataaatagagacttggttcatttgattttgacac 20584509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 47297242 - 47297278
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  47297242 tctataaatagagacttgaatcatttcatttggacac 47297278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 48927295 - 48927259
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  48927295 tctataaatagaggcttggttcatttgatttggacac 48927259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 87; Significance: 2e-41; HSPs: 3)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 349 - 213
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| |||||||||||||| | ||||||    
T  349 ctctataaatagagacttggatcatttgatttggacaaagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattaacttttctt 250  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||| |||||||||||||||||||||||    
T  249 ttgaagttttagtctttatttagtgaaatggatccca 213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 1085 - 1221
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||||||||||||||||||||||||||||          |||| ||||||||||||||||| |||||           |||||| ||||||    
T  1085 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaattttatt-----------attagcatttctt 1173  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  1174 ttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 1221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 303 - 264
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  303 aatcaagtttttcactctcttaatcttattattagctttg 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 15057003 - 15056867
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  15057003 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcttttctt 15056904  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    || |||||||||| |||||||||||||||||||||||    
T  15056903 ttaaagttttagtctttatttagtgaaatggatccca 15056867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 42860344 - 42860220
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42860344 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagcctttct 42860245  T
Q  298 tttgaagttttagtgtttatttagt 322  Q
    |||||||||||||||||||||||||    
T  42860244 tttgaagttttagtgtttatttagt 42860220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 35932277 - 35932154
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||  ||||||||||||||||||          | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35932277 ctctataaatagagacttaaatcatttgatttggacacagaaaaaaaattaagtttttcactctcttaatcttattattagctttgtattagcctttctt 35932178  T
Q  299 ttgaagttttagtgtttatttagt 322  Q
    ||||||||||||||||||||||||    
T  35932177 ttgaagttttagtgtttatttagt 35932154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 12272111 - 12272247
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||| ||| |||| ||||||| ||||||    
T  12272111 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagcttttctt 12272210  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    || |||||||||| |||||||||||||||||||||||    
T  12272211 ttaaagttttagtctttatttagtgaaatggatccca 12272247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 322
Target Start/End: Original strand, 45100674 - 45100798
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  45100674 ctctataaatagagacttggatcatttgatttggacacaggaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagtctttct 45100773  T
Q  298 tttgaagttttagtgtttatttagt 322  Q
    || ||||||||||||||||||||||    
T  45100774 ttggaagttttagtgtttatttagt 45100798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 45100506 - 45100581
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcatgttttgattggctgctcgg 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |   |||||||||||||||    
T  45100506 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggcgcgcgctgattggctgctcgg 45100581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 42860509 - 42860455
Alignment:
Q  30 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42860509 ggaagtgttgaaacaattcaacatgttgaatgcctggcccacggagacacttggc 42860455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 1633069 - 1633205
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||| |||||||||||||||||||          |||  ||||||||||||||||||||||            |||||| ||||||    
T  1633069 ctctataaatagagactttgatcatttgatttggacacagaaaaaaaatcatatttttcactctcttaatcttata-----------attagcatttctt 1633157  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  1633158 ttgaagttttagtctttgtttagtgaaatggatcccaacaataatcaa 1633205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 29732101 - 29731965
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| |||||||||||| |||||||||||||||||||          |||  |||||||||||||||||||||||           |||||| ||||||    
T  29732101 ctctacaaatagagactttgatcatttgatttggacacagaaaaaaaatcatatttttcactctcttaatcttatt-----------attagcatttctt 29732013  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  29732012 ttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 29731965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 13947806 - 13947745
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  13947806 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 13947745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 30529374 - 30529435
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||||||||||  |||||||||    
T  30529374 tattagcatttcttttgaagttttagtctttattaagtgaaatggatcccaataataatcaa 30529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 26245047 - 26244911
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||           ||| || ||||||    
T  26245047 ctctacaaatagaaacttggatcatttgatttggacacagaataaaaatcaaatttttcactctcttaatcttatt-----------atttgcatttctt 26244959  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||| ||||||||||||  |||||||||    
T  26244958 ttgaagttttagtttttgtttagtaaaatggatcccaataataatcaa 26244911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 1954977 - 1955027
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  1954977 tattagcatttcttttgaagttttagtctttaattagtgaaatggatccca 1955027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 199 - 330
Target Start/End: Original strand, 31129102 - 31129221
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||             ||||| |||||    
T  31129102 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaacccaagtttttcactctcttaatcttat-------------ttagcttttct 31129188  T
Q  298 tttgaagttttagtgtttatttagtgaaatgga 330  Q
    |||||||||||||| ||||||||||||||||||    
T  31129189 tttgaagttttagtctttatttagtgaaatgga 31129221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 13783917 - 13783978
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| |||||||||||||| |||| ||| |||||||||||||||||||  |||||||||    
T  13783917 tattagcatttcttttgaagttctagtttttgtttagtgaaatggatcccaataataatcaa 13783978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 13817471 - 13817434
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13817471 ctctataaatagagacttggatcatttgatttggacac 13817434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 23550085 - 23550024
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| |||  ||||||||||||||||||  |||||||||    
T  23550085 tattagcatttcttttgaagttttagtctttgattagtgaaatggatcccaataataatcaa 23550024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 38204964 - 38205017
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||||||| ||||||||||||||||||||| |  |||||||||    
T  38204964 tttcttttgaagttttagtctttatttagtgaaatggatcctaataataatcaa 38205017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 42861117 - 42861080
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42861117 ctctataaatagagacttggatcatttgatttggacac 42861080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 43523984 - 43524037
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||||||||||| ||||||||||| |||||||  |||||||||    
T  43523984 tttcttttgaagttttagtgtttgtttagtgaaatagatcccaataataatcaa 43524037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 44150242 - 44150181
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||| ||||||||||||||  |||||||||    
T  44150242 tattagcatttcttttgaagttttagtctttgtttattgaaatggatcccaataataatcaa 44150181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 15056957 - 15056918
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  15056957 aatcaagtttttcactctcttaatcttattattagctttg 15056918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 40284025 - 40283944
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagc 280  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| ||||||||||||||||||||||| |||||    
T  40284025 ctctacaaatagaaacttggatcatttgatttggacacagaataaaaatcaaatttttcactctcttaatcttattattagc 40283944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 42860297 - 42860258
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  42860297 aatcaagtttttcactctcttaatcttattattagctttg 42860258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 45100721 - 45100760
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  45100721 aatcaagtttttcactctcttaatcttattattagctttg 45100760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 5214214 - 5214180
Alignment:
Q  202 tataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||||||||||||||||||    
T  5214214 tataaatagagacttggatcatttgatttggacac 5214180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 17494306 - 17494403
Alignment:
Q  248 caagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagttttagtgtt-tatttagtgaaatggatcccagaaataatca 345  Q
    ||||||||||||| ||||||||||||| ||| | || |||||| ||||||||||||||||||   || | |||||||||||| ||||||  ||||||||    
T  17494306 caagtttttcactatcttaatcttattattatccttctattag-ctttcttttgaagttttaaacttctttttagtgaaatgaatcccaataataatca 17494403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 26631805 - 26631897
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagc 291  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| |||| |||||||| ||| |||| |||||||    
T  26631805 ctctataaatagagacttggttcatttgatttggacacaggaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagc 26631897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 30470471 - 30470563
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagc 291  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| |||| |||||||| ||| |||| |||||||    
T  30470471 ctctataaatagagacttggttcatttgatttggacacaggaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagc 30470563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 1954904 - 1954937
Alignment:
Q  203 ataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||    
T  1954904 ataaatagagacttggatcatttgatttggacac 1954937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 4625177 - 4625214
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4625177 ctctataaatagagacttggttcatttgatttggacac 4625214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 5736442 - 5736405
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5736442 ctctataaatagagacttggttcatttgatttggacac 5736405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 8449686 - 8449723
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8449686 ctctataaatagagacttggttcatttgatttggacac 8449723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 13783838 - 13783875
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  13783838 ctctacaaatagagacttggatcatttgatttggacac 13783875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 18028996 - 18029033
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  18028996 ctctataaatagagacttggttcatttgatttggacac 18029033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 26748611 - 26748648
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  26748611 ctctataaatagagacttggttcatttgatttggacac 26748648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 34954985 - 34955022
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  34954985 ctctataaatagagacttggttcatttgatttggacac 34955022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 41477568 - 41477507
Alignment:
Q  248 caagtttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagtttta 309  Q
    ||||||||| ||| ||||||||||||| ||| |||| ||||| | |||||||||||||||||    
T  41477568 caagttttttactatcttaatcttattattatctttctattaacttttcttttgaagtttta 41477507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 7511779 - 7511819
Alignment:
Q  386 aaataaattacttgtctgttgtcttgcattttaagcaattt 426  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  7511779 aaataaattacttgtttgttgtcttgcattttaagctattt 7511819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 35932227 - 35932192
Alignment:
Q  345 aagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||| ||||    
T  35932227 aagtttttcactctcttaatcttattattagctttg 35932192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 1957949 - 1957995
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  1957949 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 1957995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 7511416 - 7511450
Alignment:
Q  202 tataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||| ||||||||||||||||||    
T  7511416 tataaatagagacttgaatcatttgatttggacac 7511450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 15053976 - 15053930
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  15053976 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 15053930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 40283979 - 40283945
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  40283979 aatcaaatttttcactctcttaatcttattattag 40283945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 23550162 - 23550125
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  23550162 ctctacaaatagagacttgaatcatttgatttggacac 23550125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 35101816 - 35101779
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||  |||||||||||||||||    
T  35101816 ctctataaatagagacttgattcatttgatttggacac 35101779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 36912988 - 36912951
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  36912988 ctctataaatagagacttggttcatttaatttggacac 36912951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 44503598 - 44503545
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||||||| | ||| |||||||||||||||| ||  |||||||||    
T  44503598 tttcttttgaagttttaatatttgtttagtgaaatggatctcaataataatcaa 44503545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 231721 - 231665
Alignment:
Q  253 ttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagtttta 309  Q
    |||||||| ||||||||||||| ||| | || ||||||| ||| |||||||||||||    
T  231721 ttttcactatcttaatcttattattatccttctattagcttttattttgaagtttta 231665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 708132 - 708076
Alignment:
Q  253 ttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagtttta 309  Q
    |||||||| ||||||||||||| ||| | || ||||||| ||| |||||||||||||    
T  708132 ttttcactatcttaatcttattattatccttctattagcttttattttgaagtttta 708076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 745344 - 745288
Alignment:
Q  253 ttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagtttta 309  Q
    |||||||| ||||||||||||| ||| | || ||||||| ||| |||||||||||||    
T  745344 ttttcactatcttaatcttattattatccttctattagcttttattttgaagtttta 745288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 869239 - 869183
Alignment:
Q  253 ttttcactctcttaatcttattgttagctttgtattagcctttcttttgaagtttta 309  Q
    |||||||| ||||||||||||| ||| | || ||||||| ||| |||||||||||||    
T  869239 ttttcactatcttaatcttattattatccttctattagcttttattttgaagtttta 869183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 13497691 - 13497655
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggaca 235  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  13497691 ctctataaataaagacttggatcatttaatttggaca 13497655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 26245001 - 26244969
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatt 373  Q
    |||||| ||||||||||||||||||||||||||    
T  26245001 aatcaaatttttcactctcttaatcttattatt 26244969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 30289415 - 30289451
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  30289415 tctataaatagtgacttggttcatttgatttggacac 30289451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 38204920 - 38204952
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttg 231  Q
    ||||| |||||||||||||||||||||||||||    
T  38204920 ctctacaaatagagacttggatcatttgatttg 38204952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 39810709 - 39810745
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||| |||||||||||| |||||||||||||||||    
T  39810709 tctatagatagagacttggttcatttgatttggacac 39810745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 10886660 - 10886524
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||||||||          | |||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  10886660 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaattaagtttttcactctcttaatcttattattagttttgcattagcctttctt 10886561  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||||||||||||||||| |||||||    
T  10886560 ttgaagttttagtgtttatttagtgaaatagatccca 10886524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 12513447 - 12513311
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    |||||||||||||||||| |||||||||||||||||||           ||||||||||||||||||||||||||| ||| ||||  |||||| ||| ||    
T  12513447 ctctataaatagagactttgatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatcttattattaactttccattagcttttatt 12513348  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||| |||||||||||||||||||||||    
T  12513347 ttgaagttttagtctttatttagtgaaatggatccca 12513311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 12502331 - 12502196
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntc-aagtttttcactctcttaatcttattgttagctttgtattagcctttct 297  Q
    ||||||||||||||||||| ||||||||||||||||||           | |||||||||||||||||||||||||| ||| ||||  |||||| |||||    
T  12502331 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatcttattattaactttccattagcttttct 12502232  T
Q  298 tttgaagttttagtgtttatttagtgaaatggatcc 333  Q
    |||||||||||||| |||||||||||||||||||||    
T  12502231 tttgaagttttagtctttatttagtgaaatggatcc 12502196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 8222535 - 8222397
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt--caagtttttcactctcttaatcttattgttagctttgtattagcctttc 296  Q
    ||||||||||||| ||||||||||||||||||||||||             ||||||||||||||||||||||||||| ||| |||| ||||||| ||||    
T  8222535 ctctataaatagatacttggatcatttgatttggacacagaaaaaaaaaaccaagtttttcactctcttaatcttattattaactttctattagcttttc 8222436  T
Q  297 ttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||   ||||||||||||||||||||||    
T  8222435 ttttgaagttttagaaattatttagtgaaatggatccca 8222397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 30446687 - 30446551
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn---tcaagtttttcactctcttaatcttattgttagctttgtattagccttt 295  Q
    |||||||||||||||||||||||||||||||| |||||             |||||||||||||||||||||||||||| |||||| | ||||| | |||    
T  30446687 ctctataaatagagacttggatcatttgattttgacacagaaaaaaaaaaatcaagtttttcactctcttaatcttattattagctatctattaactttt 30446588  T
Q  296 cttttgaagttttagtgtttatttagtgaaatggatc 332  Q
    |||||||||||||||| |||||||| |||||||||||    
T  30446587 cttttgaagttttagtctttatttaatgaaatggatc 30446551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 24115407 - 24115323
Alignment:
Q  262 tcttaatcttattgttagctttgtattagcctttcttttgaagttttagt-gtttatttagtgaaatggatcccagaaataatca 345  Q
    ||||||||||||| |||||||| ||||||| ||||||||||| |||||||  ||| |||||||||||||||||||  ||||||||    
T  24115407 tcttaatcttattattagctttctattagcttttcttttgaacttttagtcttttttttagtgaaatggatcccaataataatca 24115323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 18642590 - 18642529
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  18642590 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 18642529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 26653807 - 26653943
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||           |||||| ||||||    
T  26653807 ctctacaaatagaaacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttatt-----------attagcatttctt 26653895  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||| |||||||| |||  |||||||||    
T  26653896 ttgaagttttagtctttgtttagtaaaatggattccaataataatcaa 26653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 26759776 - 26759912
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||           |||||| ||||||    
T  26759776 ctctacaaatagaaacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttatt-----------attagcatttctt 26759864  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||| |||||||| |||  |||||||||    
T  26759865 ttgaagttttagtctttgtttagtaaaatggattccaataataatcaa 26759912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 34242752 - 34242702
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  34242752 tattagcttttcttttgaagttttagtctttacttagtgaaatggatccca 34242702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 635102 - 635065
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  635102 ctctataaatagagacttggatcatttgatttggacac 635065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 6377131 - 6377168
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6377131 ctctataaatagagacttggatcatttgatttggacac 6377168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 8668856 - 8668819
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8668856 ctctataaatagagacttggatcatttgatttggacac 8668819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 17957999 - 17958036
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17957999 ctctataaatagagacttggatcatttgatttggacac 17958036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 34841897 - 34841860
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34841897 ctctataaatagagacttggatcatttgatttggacac 34841860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 30446638 - 30446604
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||||||||||||||||||||||||||||||||    
T  30446638 aatcaagtttttcactctcttaatcttattattag 30446604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 34841813 - 34841771
Alignment:
Q  293 tttcttttgaagttttagtgtttatttagtgaaatggatccca 335  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  34841813 tttcttttgaagttttagtctttaattagtgaaatggatccca 34841771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 198247 - 198210
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  198247 ctctataaatagagacttggttcatttgatttggacac 198210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 2503765 - 2503728
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  2503765 ctctataaatagagacttggttcatttgatttggacac 2503728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 24348898 - 24348861
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  24348898 ctctacaaatagagacttggatcatttgatttggacac 24348861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 29951725 - 29951762
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29951725 ctctataaatagagacttagatcatttgatttggacac 29951762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 34328820 - 34328783
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  34328820 ctctataaatagagacttggttcatttgatttggacac 34328783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 6725324 - 6725360
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6725324 tctataaatagagacttggttcatttgatttggacac 6725360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 10886610 - 10886575
Alignment:
Q  345 aagtttttcactctcttaatcttattattagatttg 380  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10886610 aagtttttcactctcttaatcttattattagttttg 10886575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 24348813 - 24348766
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatc 332  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||| ||||    
T  24348813 tattagcatttcttttgaagttttagtctttgtttagtgaaatagatc 24348766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 374
Target Start/End: Complemental strand, 8222484 - 8222454
Alignment:
Q  344 caagtttttcactctcttaatcttattatta 374  Q
    |||||||||||||||||||||||||||||||    
T  8222484 caagtttttcactctcttaatcttattatta 8222454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 374
Target Start/End: Complemental strand, 12502281 - 12502251
Alignment:
Q  344 caagtttttcactctcttaatcttattatta 374  Q
    |||||||||||||||||||||||||||||||    
T  12502281 caagtttttcactctcttaatcttattatta 12502251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 374
Target Start/End: Complemental strand, 12513398 - 12513368
Alignment:
Q  344 caagtttttcactctcttaatcttattatta 374  Q
    |||||||||||||||||||||||||||||||    
T  12513398 caagtttttcactctcttaatcttattatta 12513368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 17960990 - 17961036
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  17960990 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 17961036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 26653853 - 26653887
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  26653853 aatcaaatttttcactctcttaatcttattattag 26653887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 26759822 - 26759856
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattattag 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  26759822 aatcaaatttttcactctcttaatcttattattag 26759856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 34838925 - 34838879
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  34838925 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 34838879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 7540548 - 7540488
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtt-tatttagtgaaatggatcccagaaataatc 344  Q
    ||||||| ||||||||||||||||| | || | |||||||||||||||||||  |||||||    
T  7540548 tattagcttttcttttgaagttttaatcttctttttagtgaaatggatcccaataataatc 7540488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 7541362 - 7541326
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||| |||| |||||||||||||||||    
T  7541362 tctataaatagagatttggttcatttgatttggacac 7541326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 34242827 - 34242791
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  34242827 tctacaaatagagatttggatcatttgatttggacac 34242791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 106254 - 106118
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttctt 298  Q
    ||||||||||||||||||||||||||||||||| ||||          |||  ||||||||||||||||||||||            ||||||| |||||    
T  106254 ctctataaatagagacttggatcatttgatttgcacacagaaaaaaaatcatatttttcactctcttaatcttata-----------attagccattctt 106166  T
Q  299 ttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  106165 ttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 106118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 335
Target Start/End: Complemental strand, 124458 - 124322
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattgttagctttgtattagcctttcttt 299  Q
    ||||||||||||||||||| | |||||||||||||||           ||||||||| ||| ||||||||||||| ||| |||| ||||| | |||||||    
T  124458 tctataaatagagacttggtttatttgatttggacaccgaaaaaaatccaagttttttactatcttaatcttattattatctttctattaacttttcttt 124359  T
Q  300 tgaagttttagtgtt-tatttagtgaaatggatccca 335  Q
    ||||||||||   || | |||||||||||||||||||    
T  124358 tgaagttttaaacttctttttagtgaaatggatccca 124322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 614 - 553
Alignment:
Q  285 tattagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  614 tattagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 109941 - 110000
Alignment:
Q  287 ttagcctttcttttgaagttttagtgtttatttagtgaaatggatcccagaaataatcaa 346  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||    
T  109941 ttagcatttcttttgaagttttagtctttgtttagtgaaatggatcccaataataatcaa 110000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 109868 - 109905
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  109868 ctctataaatagagacttggatcatttgatttggacac 109905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 6370 - 6407
Alignment:
Q  199 ctctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  6370 ctctataaatagagacttggttcatttgatttggacac 6407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 374
Target Start/End: Original strand, 6418 - 6451
Alignment:
Q  341 aatcaagtttttcactctcttaatcttattatta 374  Q
    |||||||||||||||| |||||||||||||||||    
T  6418 aatcaagtttttcactatcttaatcttattatta 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 5051 - 5097
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  5051 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 5097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 56861 - 56907
Alignment:
Q  396 cttgtctgttgtcttgcattttaagcaatttgtatgacccttactta 442  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||||||    
T  56861 cttgtttgttgtcttgcattttaagctatttgtgtgacccgtactta 56907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1183 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 64 - 28
Alignment:
Q  200 tctataaatagagacttggatcatttgatttggacac 236  Q
    |||||||||||| |||||| |||||||||||||||||    
T  64 tctataaatagatacttggttcatttgatttggacac 28  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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