View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12871_high_24 (Length: 322)

Name: NF12871_high_24
Description: NF12871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12871_high_24
NF12871_high_24
[»] chr1 (43 HSPs)
chr1 (11-306)||(13941340-13941636)
chr1 (208-306)||(9410304-9410401)
chr1 (226-305)||(9768803-9768882)
chr1 (223-305)||(42908793-42908875)
chr1 (226-305)||(11238022-11238101)
chr1 (208-303)||(35424164-35424259)
chr1 (208-303)||(50898726-50898820)
chr1 (226-304)||(41677083-41677161)
chr1 (208-263)||(195108-195163)
chr1 (226-305)||(2903021-2903100)
chr1 (208-263)||(50147588-50147643)
chr1 (226-305)||(50199470-50199549)
chr1 (208-274)||(9769556-9769622)
chr1 (208-270)||(19866532-19866594)
chr1 (208-274)||(40679838-40679904)
chr1 (208-293)||(1576097-1576182)
chr1 (208-265)||(16182871-16182928)
chr1 (208-305)||(43020633-43020730)
chr1 (226-305)||(3341730-3341809)
chr1 (223-262)||(23750215-23750254)
chr1 (208-298)||(23758228-23758319)
chr1 (208-305)||(7015662-7015760)
chr1 (226-303)||(1721164-1721241)
chr1 (229-306)||(17643008-17643082)
chr1 (208-257)||(39928310-39928359)
chr1 (226-274)||(9976378-9976426)
chr1 (225-304)||(4605836-4605914)
chr1 (208-298)||(11405485-11405573)
chr1 (226-305)||(18003838-18003917)
chr1 (226-297)||(27654999-27655070)
chr1 (226-301)||(41182800-41182874)
chr1 (208-305)||(4288610-4288707)
chr1 (224-262)||(8904319-8904357)
chr1 (229-298)||(12035336-12035403)
chr1 (226-303)||(12553217-12553295)
chr1 (208-274)||(33844670-33844736)
chr1 (208-274)||(33949242-33949308)
chr1 (208-274)||(48565123-48565189)
chr1 (213-297)||(24889170-24889255)
chr1 (213-262)||(32609233-32609282)
chr1 (226-306)||(25270155-25270235)
chr1 (223-298)||(37733784-37733857)
chr1 (226-274)||(48260183-48260231)
[»] chr3 (33 HSPs)
chr3 (11-305)||(4045413-4045707)
chr3 (11-138)||(4070684-4070811)
chr3 (208-274)||(40956663-40956729)
chr3 (208-305)||(24130581-24130678)
chr3 (208-305)||(3461699-3461797)
chr3 (232-305)||(3973324-3973397)
chr3 (208-305)||(3993683-3993780)
chr3 (232-305)||(3996479-3996552)
chr3 (208-297)||(6054201-6054290)
chr3 (208-265)||(17262281-17262338)
chr3 (223-305)||(26583123-26583206)
chr3 (211-298)||(42665904-42665991)
chr3 (229-303)||(31917865-31917938)
chr3 (209-263)||(47497142-47497196)
chr3 (208-305)||(4009994-4010091)
chr3 (226-303)||(19137643-19137720)
chr3 (208-292)||(54983683-54983765)
chr3 (223-303)||(28951890-28951970)
chr3 (226-305)||(34407084-34407163)
chr3 (247-293)||(9167286-9167332)
chr3 (208-265)||(36763493-36763551)
chr3 (141-198)||(4071538-4071594)
chr3 (209-297)||(8493259-8493345)
chr3 (213-262)||(21248971-21249020)
chr3 (208-305)||(31680754-31680850)
chr3 (208-305)||(31902182-31902278)
chr3 (208-305)||(51493620-51493717)
chr3 (209-305)||(2903730-2903826)
chr3 (208-304)||(24160504-24160600)
chr3 (226-262)||(32080120-32080156)
chr3 (208-304)||(33533226-33533322)
chr3 (218-301)||(38682246-38682327)
chr3 (209-265)||(40160797-40160853)
[»] chr8 (26 HSPs)
chr8 (208-304)||(35779778-35779872)
chr8 (208-305)||(220338-220435)
chr8 (208-305)||(689493-689590)
chr8 (208-305)||(733961-734058)
chr8 (208-305)||(857857-857954)
chr8 (213-303)||(42711184-42711274)
chr8 (208-305)||(216123-216220)
chr8 (208-305)||(692683-692780)
chr8 (208-305)||(696892-696989)
chr8 (208-305)||(729746-729843)
chr8 (208-305)||(853641-853738)
chr8 (211-303)||(25470825-25470917)
chr8 (208-298)||(33570407-33570495)
chr8 (223-305)||(14011029-14011111)
chr8 (209-260)||(11900632-11900683)
chr8 (226-305)||(22847256-22847335)
chr8 (208-262)||(36130514-36130568)
chr8 (225-305)||(7345450-7345530)
chr8 (226-301)||(26900445-26900518)
chr8 (208-298)||(13537289-13537377)
chr8 (208-298)||(13626837-13626925)
chr8 (211-265)||(12926457-12926511)
chr8 (208-266)||(39208845-39208903)
chr8 (208-305)||(1028531-1028626)
chr8 (226-298)||(43468701-43468771)
chr8 (229-305)||(28979048-28979124)
[»] chr5 (31 HSPs)
chr5 (229-305)||(38040288-38040363)
chr5 (223-305)||(6291018-6291099)
chr5 (224-301)||(13754032-13754107)
chr5 (211-304)||(40384274-40384367)
chr5 (226-298)||(27006369-27006441)
chr5 (208-263)||(29561712-29561767)
chr5 (226-305)||(31556840-31556919)
chr5 (226-305)||(38361507-38361586)
chr5 (226-306)||(7147013-7147093)
chr5 (208-304)||(42553117-42553212)
chr5 (223-298)||(13862154-13862228)
chr5 (208-303)||(42260696-42260791)
chr5 (211-305)||(11246473-11246567)
chr5 (209-298)||(10192868-10192956)
chr5 (208-253)||(18535988-18536033)
chr5 (213-262)||(22687862-22687911)
chr5 (208-305)||(28537157-28537254)
chr5 (226-274)||(22396982-22397030)
chr5 (208-263)||(4429207-4429262)
chr5 (236-303)||(31709966-31710032)
chr5 (223-298)||(38129004-38129079)
chr5 (223-305)||(3535927-3536009)
chr5 (213-298)||(9408933-9409016)
chr5 (209-262)||(14077233-14077286)
chr5 (208-305)||(35813219-35813315)
chr5 (209-298)||(37986844-37986933)
chr5 (226-263)||(41539378-41539415)
chr5 (223-298)||(9963445-9963518)
chr5 (226-274)||(10106683-10106731)
chr5 (237-305)||(31907673-31907741)
chr5 (223-303)||(39684262-39684342)
[»] chr4 (34 HSPs)
chr4 (213-304)||(1589139-1589229)
chr4 (227-305)||(36045852-36045930)
chr4 (226-305)||(33359839-33359918)
chr4 (208-298)||(49743391-49743481)
chr4 (208-305)||(20610761-20610858)
chr4 (243-298)||(9084788-9084843)
chr4 (208-298)||(11084227-11084318)
chr4 (229-298)||(54413974-54414042)
chr4 (208-304)||(4419662-4419758)
chr4 (213-293)||(47416502-47416582)
chr4 (208-263)||(9302634-9302689)
chr4 (208-298)||(35122073-35122164)
chr4 (226-305)||(49039439-49039518)
chr4 (208-274)||(6202656-6202722)
chr4 (208-298)||(35230271-35230361)
chr4 (247-293)||(43115302-43115348)
chr4 (208-274)||(55677158-55677224)
chr4 (223-304)||(55967601-55967682)
chr4 (210-262)||(12585537-12585589)
chr4 (223-263)||(21023343-21023383)
chr4 (229-305)||(32887153-32887229)
chr4 (226-305)||(41492493-41492571)
chr4 (212-274)||(47094116-47094178)
chr4 (208-253)||(21664152-21664197)
chr4 (208-253)||(21672916-21672961)
chr4 (226-298)||(37032175-37032245)
chr4 (229-305)||(49319415-49319492)
chr4 (212-305)||(53621222-53621313)
chr4 (237-305)||(56865-56933)
chr4 (223-303)||(16336466-16336546)
chr4 (211-298)||(31480300-31480385)
chr4 (211-298)||(32885717-32885802)
chr4 (214-301)||(34684594-34684679)
chr4 (223-298)||(41003165-41003237)
[»] chr7 (41 HSPs)
chr7 (209-303)||(24579263-24579357)
chr7 (208-303)||(43635612-43635707)
chr7 (208-305)||(11808060-11808158)
chr7 (208-305)||(10020445-10020542)
chr7 (212-305)||(38328547-38328639)
chr7 (214-303)||(38363183-38363272)
chr7 (208-274)||(23470477-23470543)
chr7 (226-304)||(23799323-23799401)
chr7 (213-301)||(8724406-8724492)
chr7 (208-305)||(35498420-35498516)
chr7 (208-305)||(42976576-42976673)
chr7 (208-305)||(43712289-43712386)
chr7 (209-305)||(32309125-32309221)
chr7 (209-305)||(35195865-35195961)
chr7 (226-305)||(5773151-5773232)
chr7 (224-298)||(7162660-7162734)
chr7 (224-274)||(38854000-38854050)
chr7 (223-305)||(44409223-44409304)
chr7 (213-298)||(2567813-2567898)
chr7 (208-305)||(27726345-27726442)
chr7 (213-306)||(37410462-37410555)
chr7 (226-298)||(45198094-45198164)
chr7 (225-305)||(19837304-19837384)
chr7 (229-288)||(27454050-27454107)
chr7 (208-303)||(7392282-7392377)
chr7 (211-294)||(13905970-13906053)
chr7 (229-276)||(19687282-19687329)
chr7 (208-298)||(16916486-16916576)
chr7 (228-274)||(21877668-21877714)
chr7 (234-304)||(24427386-24427456)
chr7 (208-298)||(36315950-36316040)
chr7 (208-298)||(39524717-39524806)
chr7 (209-298)||(3481146-3481234)
chr7 (208-264)||(17997716-17997770)
chr7 (212-265)||(25200634-25200687)
chr7 (226-263)||(26734265-26734302)
chr7 (249-298)||(31694099-31694148)
chr7 (208-305)||(32814849-32814946)
chr7 (208-293)||(41000794-41000879)
chr7 (269-306)||(41222227-41222264)
chr7 (214-298)||(44843721-44843802)
[»] chr2 (39 HSPs)
chr2 (226-304)||(45314433-45314511)
chr2 (213-305)||(1244591-1244683)
chr2 (223-298)||(17239930-17240003)
chr2 (226-306)||(22355104-22355184)
chr2 (208-304)||(38581582-38581677)
chr2 (237-304)||(44132568-44132635)
chr2 (226-304)||(37123209-37123287)
chr2 (208-305)||(25463242-25463339)
chr2 (225-301)||(2057507-2057581)
chr2 (226-305)||(14307688-14307767)
chr2 (208-279)||(33124341-33124412)
chr2 (209-304)||(36345158-36345252)
chr2 (226-303)||(12206522-12206599)
chr2 (209-282)||(42507333-42507406)
chr2 (226-298)||(44721700-44721770)
chr2 (208-264)||(29896137-29896193)
chr2 (243-290)||(1962863-1962910)
chr2 (229-304)||(4529760-4529835)
chr2 (257-304)||(11001758-11001805)
chr2 (211-262)||(17896883-17896934)
chr2 (223-297)||(2394964-2395037)
chr2 (243-301)||(3364751-3364809)
chr2 (208-258)||(23664038-23664088)
chr2 (208-298)||(36386090-36386179)
chr2 (223-305)||(37065425-37065507)
chr2 (208-274)||(39334857-39334923)
chr2 (208-274)||(44487743-44487809)
chr2 (226-298)||(9796926-9796996)
chr2 (226-298)||(11133105-11133175)
chr2 (223-264)||(22285165-22285206)
chr2 (225-274)||(25406643-25406692)
chr2 (237-298)||(34830616-34830676)
chr2 (231-303)||(36190078-36190151)
chr2 (211-263)||(407542-407594)
chr2 (214-298)||(18065283-18065367)
chr2 (229-305)||(19905148-19905224)
chr2 (223-298)||(25731963-25732039)
chr2 (229-305)||(36413782-36413858)
chr2 (228-292)||(41305062-41305126)
[»] chr6 (26 HSPs)
chr6 (229-303)||(14949016-14949091)
chr6 (208-305)||(4844165-4844262)
chr6 (208-263)||(26669635-26669690)
chr6 (226-305)||(30833039-30833118)
chr6 (212-274)||(3037569-3037631)
chr6 (209-298)||(32057063-32057150)
chr6 (223-304)||(29204860-29204941)
chr6 (225-304)||(1488111-1488190)
chr6 (226-297)||(7233995-7234066)
chr6 (226-305)||(19680242-19680321)
chr6 (225-270)||(16110985-16111030)
chr6 (226-305)||(34524897-34524976)
chr6 (208-305)||(9031788-9031886)
chr6 (226-264)||(20149973-20150011)
chr6 (226-264)||(22182821-22182859)
chr6 (208-253)||(3243890-3243935)
chr6 (214-274)||(15126295-15126353)
chr6 (208-305)||(31595193-31595290)
chr6 (211-274)||(8176049-8176113)
chr6 (226-305)||(8309186-8309266)
chr6 (211-274)||(9422886-9422950)
chr6 (223-263)||(12291234-12291274)
chr6 (208-264)||(17305580-17305635)
chr6 (249-305)||(20858400-20858456)
chr6 (213-304)||(22730682-22730774)
chr6 (226-274)||(29430297-29430345)
[»] scaffold0119 (1 HSPs)
scaffold0119 (208-263)||(1103-1158)
[»] scaffold0129 (1 HSPs)
scaffold0129 (226-298)||(7085-7157)
[»] scaffold0011 (1 HSPs)
scaffold0011 (225-305)||(19388-19468)
[»] scaffold1603 (1 HSPs)
scaffold1603 (224-297)||(630-703)
[»] scaffold0079 (1 HSPs)
scaffold0079 (223-303)||(56314-56394)
[»] scaffold0009 (1 HSPs)
scaffold0009 (226-274)||(62766-62814)


Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 11 - 306
Target Start/End: Complemental strand, 13941636 - 13941340
Alignment:
Q  11 cagagaccgtgatttcagttgagttgctctttgtcccctttcattctattcttggatttaccttatcacgggtagggttgcttcatcagttcaatcaatg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  13941636 cagagaccgtgatttcagttgagttgctctttgtcccctttcattctattcttggatttaccttatcacaggtggggttgcttcatcagttcaatcaatg 13941537  T
Q  111 tcacaaatcataaaacaaactcggactaacatagacattcaatgttacccttcaacaatgttacccatttattcattt---taaaagataannnnnnnnn 207  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||             
T  13941536 tcacaaatcataaaacaaactcggattaacatagacattcaatgttacccttcaacaatgttacccatttattcattttaataaaagataa--ttttttt 13941439  T
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcct 306  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||||| |||||||    
T  13941438 gtcaagtagtttagtggttagaattcacttttttcaagatgaataagtggggtgtccgaagttcgaacctcgaaccctgcatataacaatgcatgtcct 13941340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 9410304 - 9410401
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcct 306  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| ||||||||||| ||| |||||||    
T  9410304 gtcaagtagtttagtagttaaaattcacctttttcaagatgaataagtggggtgtctgaggttcgaatctcaacc-ctgcatataactatgcatgtcct 9410401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 9768803 - 9768882
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||||||||| ||||||| |||||||||||  ||||||| | ||||| ||||||||||||||| ||||||    
T  9768803 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtcc 9768882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 42908875 - 42908793
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||| |||||||||||| |||||| |||||| |||| |||||||| | ||||| ||||||||||||||| ||||||    
T  42908875 ggttagaattctcctttttcaagaagaataagtggggtatccggagttcgaaccccgacccctgcatataacaatgcatgtcc 42908793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 11238022 - 11238101
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||||||||||||||||| |||||||||||   |||||| | ||||| |||||||||| |||| ||||||    
T  11238022 tagaattcacctttttcaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcatgtcc 11238101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 303
Target Start/End: Complemental strand, 35424259 - 35424164
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||||||||| ||| || ||||||||| |||||||||| |||||||||||||| ||||  |||||||||||  ||  |||||||||||||| ||||    
T  35424259 gtcaagtagtctagtggctagaattcatctttttcaaggtgaataaatggggtatccggggttcgaatctcagcccatgcatataacaatgcatgt 35424164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 303
Target Start/End: Original strand, 50898726 - 50898820
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||| |  |||||||||  |||  ||||||||||||||| ||||    
T  50898726 gtcaaatagtttagtggttagaattcacctttttaaagatgaat-aatggggtgtctggggttcgaatccagactcctgcatataacaatgcatgt 50898820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 41677161 - 41677083
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||| | ||||| | |||||||| |||| |||||    
T  41677161 tagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatgaatgtc 41677083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 195163 - 195108
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||||    
T  195163 gtcaagtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtc 195108  T

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Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 2903021 - 2903100
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||| ||||||||||| ||||||| |||||||| ||  ||||||| | ||||| ||||||||||||||| ||||||    
T  2903021 tagaattctcctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacctctgcatataacaatgcatgtcc 2903100  T

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Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 50147643 - 50147588
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    |||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||    
T  50147643 gtcaagtagtttagtggttagaattcactttttttaaggtgaataaatggggtgtc 50147588  T

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Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 50199470 - 50199549
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||| |||||||||||| ||||||| |||||||||||  ||||||| | || || ||||||||||||||| ||||||    
T  50199470 tagaattgacctttttcaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcatgtcc 50199549  T

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Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 9769556 - 9769622
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||| |||| |||| ||||||||||||||||||||||| ||||||| |||||||||||  |||||||    
T  9769556 gtcaggtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaa 9769622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 19866594 - 19866532
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagtt 270  Q
    |||||||||||||| || |||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  19866594 gtcaagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccggagtt 19866532  T

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Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 40679904 - 40679838
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||| ||||||||| ||||||||||| ||||||| |||  |||||| ||||||||||||||||||||    
T  40679904 gtcaggtagtttagaggttagaattctccttttttaaggagaataagtggggtgtccgaagttcgaa 40679838  T

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Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 1576097 - 1576182
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 293  Q
    |||||||||||||| | ||||||||||| ||||||||| | ||||| |||||||||||  ||| ||||| || || ||||||||||    
T  1576097 gtcaagtagtttagtgattagaattcacttttttcaaggtaaataagtggggtgtccggggtttgaatcccggcccctgcatataa 1576182  T

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Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 16182928 - 16182871
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 265  Q
    |||||||| ||||| ||||||||||||  ||||||||||||||||| |||||||||||    
T  16182928 gtcaagtaatttagtggttagaattcatatttttcaagatgaataagtggggtgtccg 16182871  T

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Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 43020730 - 43020633
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||  ||| || |||||||||| ||||||||| ||||| | |||||||||||| ||||||| | | ||| |||||||||| |||| ||||||    
T  43020730 gtcaagtagcgtagtggctagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcatgtcc 43020633  T

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Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 3341730 - 3341809
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||||||||| ||||||| |||||||||||  ||||||  | || || |||||||||| |||| ||||||    
T  3341730 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatataataatgcatgtcc 3341809  T

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Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 23750254 - 23750215
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgt 262  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  23750254 ggttagaattcacctttttcaagatgaataagtggggtgt 23750215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 23758228 - 23758319
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaa-tggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||| ||| |||||||||||||  |||| |||||||||||| |||||||| ||  ||||||| ||| ||| |||||||||| ||||    
T  23758228 gtcaagtagtctagtggttagaattcacaatttttaagatgaataaagtggggtgttcggggttcgaacctcaacccctgcatataataatg 23758319  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 7015662 - 7015760
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaa-tggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||| ||||| ||||| ||||||| ||||||||| ||||| || |||||||| || |||||||| |||  || || |||||||||||| ||||||    
T  7015662 gtcaagtaatttagtggttaaaattcacatttttcaaggtgaattaagtggggtgttcggagttcgaacctcagcccctacatataacaatgcatgtcc 7015760  T

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Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 1721241 - 1721164
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||||||||||||||| ||| ||||||| || ||||||||  ||||||| | || || ||||||||||||||| ||||    
T  1721241 tagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaaacccggcccctgcatataacaatgcatgt 1721164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 17643008 - 17643082
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcct 306  Q
    ||||||||||||| ||||||||||||||   ||||||| ||||||||||||||  ||||||||||||||| |||||||    
T  17643008 aattcaccttttt-aagatgaataaatgaa-tgtccga-gttcgaatctcgactcctgcatataacaatgcatgtcct 17643082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 39928359 - 39928310
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatgg 257  Q
    |||| ||||||||| ||||||||||||||||||| |||||||| ||||||    
T  39928359 gtcaggtagtttagtggttagaattcaccttttttaagatgaaaaaatgg 39928310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 9976378 - 9976426
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||| ||||||||| ||||||| ||||||||||| ||||||||    
T  9976378 tagaattcacttttttcaaggtgaataagtggggtgtccggagttcgaa 9976426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 4605836 - 4605914
Alignment:
Q  225 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    ||||||||||||||||| ||| |||||||||| |||||| || ||| ||| || | || ||||||||||||||| |||||    
T  4605836 ttagaattcaccttttttaaggtgaataaatgaggtgtctgaggtttgaa-cttggcccctgcatataacaatgcatgtc 4605914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 11405573 - 11405485
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||| |||| |||| || ||||||||||||| |  ||| ||||||| |||||||||||  ||||||| | ||||| |||||||||||||||    
T  11405573 gtcaggtagcttagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatg 11405485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 18003917 - 18003838
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||| || ||||||| |||||||| ||  | ||||| | || || ||||||||||||||| ||||||    
T  18003917 tagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtcc 18003838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 27654999 - 27655070
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 297  Q
    |||||||||||||||||||| ||||||| ||||||||| |  ||||| |||  |||| ||| ||||||||||    
T  27654999 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcgtatccagacctctgtatataacaat 27655070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 41182874 - 41182800
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 301  Q
    |||||||||||||||  ||| ||||||| |||||||||||  |||| || | ||||| ||||||||||||||||||    
T  41182874 tagaattcaccttttcaaag-tgaataagtggggtgtccggggttcaaaccccgacccctgcatataacaatgtat 41182800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 4288707 - 4288610
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctc-gaccactgcatataacaatgtatgtcc 305  Q
    |||||| || |||| || ||||||||| |||||| ||| |||||||||| |||||| |  ||||||| ||| |||| |||||||||| |||||||||||    
T  4288707 gtcaaggagcttagtggctagaattcatcttttttaaggtgaataaatgaggtgtctggggttcgaa-ctctgacccctgcatataataatgtatgtcc 4288610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 8904357 - 8904319
Alignment:
Q  224 gttagaattcacctttttcaagatgaataaatggggtgt 262  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  8904357 gttagaattcacctttttcaaaatgaataagtggggtgt 8904319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 12035336 - 12035403
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||||||| |||| |||||||  ||||||  |||||| ||||||| |||||||||| ||||    
T  12035336 aattcacctttttcaaggtgaaaaaatggg--gtccgagattcgaacctcgacccctgcatataataatg 12035403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 12553295 - 12553217
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa-tctcgaccactgcatataacaatgtatgt 303  Q
    |||||||||||||||||||  ||||||| |||||||||||  |||||||  | || || ||||||||||||||| ||||    
T  12553295 tagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaacccccggcccctgcatataacaatgcatgt 12553217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 33844736 - 33844670
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||| ||| || || ||||||||||||||||  ||||||| |||||||||||  |||||||    
T  33844736 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaa 33844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 33949242 - 33949308
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||| ||| || || ||||||||||||||||  ||||||| |||||||||||  |||||||    
T  33949242 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaa 33949308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 48565123 - 48565189
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    ||||||||| |||| |  |||||||||||||||||||  | ||||| |||||||||||| |||||||    
T  48565123 gtcaagtagcttagtgtctagaattcacctttttcaaagtaaataagtggggtgtccgaggttcgaa 48565189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 24889255 - 24889170
Alignment:
Q  213 gtagtttaggggtt-agaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 297  Q
    ||||||||| |||| | ||||||||||||||||  ||||||| |||||||| || |||||||| |||| ||  || ||||||||||    
T  24889255 gtagtttagtggtttaaaattcacctttttcaaagtgaataagtggggtgttcggagttcgaacctcggcccttgtatataacaat 24889170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 32609233 - 32609282
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 262  Q
    ||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  32609233 gtagtctagtggttagaattcatctttttcaaggcgaataaatggggtgt 32609282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 306
Target Start/End: Original strand, 25270155 - 25270235
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcct 306  Q
    ||||||||| |||||||||  | ||||| |||||||||||| ||||||||| ||    || |||||||||||| |||||||    
T  25270155 tagaattcatctttttcaaattaaataagtggggtgtccgaggttcgaatcccggatcctacatataacaatgcatgtcct 25270235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 37733857 - 37733784
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||||| |  ||| ||||||| |||||||||||  ||||||| | || ||||||||||||| ||||    
T  37733857 ggttagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgtccactgcatataataatg 37733784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 48260183 - 48260231
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||| ||||||||| ||||||| |||||||||||  |||||||    
T  48260183 tagaattcacatttttcaaggtgaataagtggggtgtccggggttcgaa 48260231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 305
Target Start/End: Original strand, 4045413 - 4045707
Alignment:
Q  11 cagagaccgtgatttcagttgagttgctctttgtcccctttcattctattcttggatttaccttatcacgggtagggttgcttcatcagttcaatcaatg 110  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  4045413 cagagaccgtgatttcagttgagttgctctt-gtcccctttcattctattcttggatttaccttatcacaggtggggttgcttcatcagttcaatcaatg 4045511  T
Q  111 tcacaaatcataaaacaaactcggactaacatagacattcaatgttacccttcaacaatgttacccatttattcattttaaaagataa-nnnnnnnnngt 209  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  4045512 tcacaaatcataaaacaaactcggattaacataaacattcaatgttacccttcaacaatgttacccatttattcattttaaaagataattttttttttgt 4045611  T
Q  210 caagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||| | |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  4045612 caactggtttagcggttagaattcacctttttcaagatgaataagtggggtgtccgaagttcgaacctcgacccctgcatataacaatgcatgtcc 4045707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 4070684 - 4070811
Alignment:
Q  11 cagagaccgtgatttcagttgagttgctctttgtcccctttcattctattcttggatttaccttatcacgggtagggttgcttcatcagttcaatcaatg 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  4070684 cagagaccgtgatttcagttgagttgctctttgtcccctttcgttctattcttggatttaccttatcacaggtggggttgcttcatcagttcaatcaatg 4070783  T
Q  111 tcacaaatcataaaacaaactcggacta 138  Q
    |||||||||||||||||||||| |||||    
T  4070784 tcacaaatcataaaacaaactcagacta 4070811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 40956663 - 40956729
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||  |||||||    
T  40956663 gtcaagtagtttagtggttagaattcaccttttttaagctgaataaatgaggtgtccggggttcgaa 40956729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 24130678 - 24130581
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| || ||| ||||| |||||||||| ||||||| |||||||||||  |||| || | || || ||||||||||||||||||||||    
T  24130678 gtcaagtagtctagtggctagtattcaactttttcaaggtgaataagtggggtgtccggggttcaaaccccgtcccctgcatataacaatgtatgtcc 24130581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 3461699 - 3461797
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaat-ggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| |||||||||||||||| ||||| |||||||||| ||||||| ||  ||||||| | | ||| || |||||||||||| ||||||    
T  3461699 gtcaagtagtctagcggttagaattcaccttattcaaaatgaataaatgggggtgttcggggttcgaaccccaacccctacatataacaatgcatgtcc 3461797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 305
Target Start/End: Complemental strand, 3973397 - 3973324
Alignment:
Q  232 tcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||| |||||||| |||||||||||||||||||  |||| |||| || || ||||||||||||||| ||||||    
T  3973397 tcaccattttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtcc 3973324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 3993683 - 3993780
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||  ||| |||||||||||||| |||||||  || ||||||||||||||||  |||| || | || || ||||||||||||||| ||||||    
T  3993683 gtcaagtagcctagtggttagaattcaccattttcaaagtgcataaatggggtgtccggggttcaaaccgcggcccctgcatataacaatgcatgtcc 3993780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 3996479 - 3996552
Alignment:
Q  232 tcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||| |||||||| |||||||||||||||||||  |||| |||| || || ||||||||||||||| ||||||    
T  3996479 tcaccattttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtcc 3996552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 297
Target Start/End: Original strand, 6054201 - 6054290
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 297  Q
    ||||| |||| ||| ||||||||||||||||||||||| ||||||| || ||||| || ||||||||   ||||| |||||| |||||||    
T  6054201 gtcaaatagtctagtggttagaattcacctttttcaaggtgaataagtgaggtgttcggagttcgaactccgacctctgcatctaacaat 6054290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 17262338 - 17262281
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 265  Q
    |||||||||||||  | ||||||||||||||||||||| ||||||| |||||||||||    
T  17262338 gtcaagtagtttaatgattagaattcacctttttcaaggtgaataagtggggtgtccg 17262281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 26583206 - 26583123
Alignment:
Q  223 ggttagaattcacc-tttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||  ||||| ||||||||||| || |||||||| |||||||| | ||||| |||||||||| |||| ||||||    
T  26583206 ggttagaattcactattttttaagatgaataattgaggtgtccgtagttcgaaccccgacccctgcatataataatgcatgtcc 26583123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 298
Target Start/End: Original strand, 42665904 - 42665991
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||| ||| | ||||||||||  ||||||||| ||||||| ||||||||||| ||||||||   ||||| |||||| ||||||||    
T  42665904 aagtagtctagtgattagaattcatttttttcaaggtgaataagtggggtgtccggagttcgaactccgacccctgcatttaacaatg 42665991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 303
Target Start/End: Original strand, 31917865 - 31917938
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||| |||||||| ||| ||||||| |||||||||||||||||||| | ||||| || |||||||||||| ||||    
T  31917865 aatttaccttttt-aaggtgaataagtggggtgtccgaagttcgaagcccgacctctacatataacaatgcatgt 31917938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 47497196 - 47497142
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    ||||||||||||| ||||| ||||||||||||| ||| ||||||| |||||||||    
T  47497196 tcaagtagtttagtggttaaaattcaccttttttaaggtgaataagtggggtgtc 47497142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 4009994 - 4010091
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||  ||| |||||||||||| | |||||||| |||||||||||||||| ||  |||| ||   || || ||||||||||||||| ||||||    
T  4009994 gtcaagtagcctagtggttagaattcaacattttcaaggtgaataaatggggtgttcggggttcaaactgcggcccctgcatataacaatgcatgtcc 4010091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 19137720 - 19137643
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||||||| | |||||||||  |||||||||||||||| |  ||||||| |||| || ||||||||||||||| ||||    
T  19137720 tagaattctcttttttcaaggagaataaatggggtgtctggggttcgaacctcggcccctgcatataacaatgcatgt 19137643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 54983683 - 54983765
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatata 292  Q
    |||| ||||||||| || ||||||||||||| |  ||| |||||||||||||||||||  ||||||| | ||||| |||||||||    
T  54983683 gtcaggtagtttagtggctagaattcaccttat--aaggtgaataaatggggtgtccggggttcgaaccccgacccctgcatata 54983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 28951970 - 28951890
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    ||||||||||||| ||||||||| ||||||| |||||||| ||  ||||||| |  |||| |||||||||| |||| ||||    
T  28951970 ggttagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataataatgcatgt 28951890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 34407084 - 34407163
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||| | |||||||||||||||| ||||||||| |  ||||||| | | ||| |||||||||| |||| ||||||    
T  34407084 tagaattcatcattttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtcc 34407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 9167286 - 9167332
Alignment:
Q  247 tgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 293  Q
    ||||||| |||||||||||||||||||| | ||||| ||||||||||    
T  9167286 tgaataactggggtgtccgaagttcgaaccccgacccctgcatataa 9167332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 36763551 - 36763493
Alignment:
Q  208 gtcaagtagtttaggggttagaa-ttcacctttttcaagatgaataaatggggtgtccg 265  Q
    |||||||||| ||| || ||||| ||||||||||| ||||||||||| |||||||||||    
T  36763551 gtcaagtagtctagtggctagaaattcacctttttaaagatgaataagtggggtgtccg 36763493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 4071538 - 4071594
Alignment:
Q  141 atagacattcaatgttacccttcaacaatgttacccatttattcattttaaaagataa 198  Q
    ||||||||| ||||||||||||||| ||||  || |||||||| ||||||||||||||    
T  4071538 atagacatt-aatgttacccttcaataatgacacacatttatttattttaaaagataa 4071594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 8493345 - 8493259
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 297  Q
    ||||||||||||   | |||||||||||||||  ||| ||||||| |  ||||| || |||||||||||||||| |||||||| |||||    
T  8493345 tcaagtagtttaatagctagaattcacctttt--aaggtgaataagtaaggtgttcggagttcgaatctcgacctctgcatattacaat 8493259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 21248971 - 21249020
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 262  Q
    ||||| ||| || |||||||||||||||||||| ||||||| ||||||||    
T  21248971 gtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgt 21249020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 31680850 - 31680754
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||| |||| ||| || || ||||||||||||| ||| ||||||| ||||||||||||||||| || | | ||| || | |||||||||| ||||||    
T  31680850 gtcaaatagtctagtggctaaaattcaccttttt-aaggtgaataagtggggtgtccgaagttcaaaccccaacctctacgtataacaatgcatgtcc 31680754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 31902182 - 31902278
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||| |||| ||| || || |||| |||||||| ||| ||||||| ||||||||||| |||||||| | ||||| || ||||||| |||| ||||||    
T  31902182 gtcaaatagtctagtggctaaaatttaccttttt-aaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataaaaatgcatgtcc 31902278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 51493717 - 51493620
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| ||||||||||||| |||||| || ||| ||| ||||| || ||  ||||||| | |||||  |||||| ||||||| ||||||    
T  51493717 gtcaagtagtatagtggttagaattcacttttttcgaggtgattaagtggggcgttcggggttcgaaccccgacccttgcataaaacaatgcatgtcc 51493620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 2903826 - 2903730
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||| ||  || |||||| ||||||||||||| ||||||| | |||| ||||  ||| ||| | |  || ||||||||||||||||||||||    
T  2903826 tcaagtagtctaatggctagaatccacctttttcaaggtgaataagttgggtatccggggtttgaaccccagcccctgcatataacaatgtatgtcc 2903730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 24160504 - 24160600
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||| | | || ||||||||| |||||| ||  ||||||| ||| |||||||  ||||||| | ||||| |||||||||||| || |||||    
T  24160504 gtcaagtagtctggtggctagaattcaactttttgaaagtgaataagtggagtgtccggggttcgaaccccgacccctgcatataacagtgcatgtc 24160600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 32080156 - 32080120
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgt 262  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  32080156 tagaattcacctttttcaaggtgaataagtggggtgt 32080120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 33533322 - 33533226
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||| |||  |||||||||||| ||||| ||| ||||||| |||| ||||    ||||||| | | |||||| |||||||||||| |||||    
T  33533322 gtcaagtagtctagttgttagaattcactttttttaaggtgaataagtgggatgtctatggttcgaaccccaaccactacatataacaatgcatgtc 33533226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 38682246 - 38682327
Alignment:
Q  218 ttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 301  Q
    |||| |||||||||||||||| |  |||||||||||   |||||||||   |||||||| ||||| |||||||||| |||||||    
T  38682246 ttagtggttagaattcaccttat--aagatgaataaggagggtgtccgggattcgaatcccgacccctgcatataataatgtat 38682327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 40160853 - 40160797
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 265  Q
    ||||||||  ||| || |||||||||||||||| ||| ||||||| |||||||||||    
T  40160853 tcaagtagcctagtggctagaattcacctttttaaaggtgaataagtggggtgtccg 40160797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 35779872 - 35779778
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||||||| || ||||||||| |||||||||||||||||| |||||||||| | ||||||| | ||||  ||||||||||||||| |||||    
T  35779872 gtcaagtagtttagaggctagaattcatctttttcaagatgaataagtggggtgtcctaggttcgaaccccgac--ctgcatataacaatgcatgtc 35779778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 220338 - 220435
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||   |||||| |  |||| |||||||||||| || ||||||    
T  220338 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtcc 220435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 689493 - 689590
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||   |||||| |  |||| |||||||||||| || ||||||    
T  689493 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtcc 689590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 733961 - 734058
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||   |||||| |  |||| |||||||||||| || ||||||    
T  733961 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtcc 734058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 857857 - 857954
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||   |||||| |  |||| |||||||||||| || ||||||    
T  857857 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtcc 857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 42711274 - 42711184
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    ||||||||| ||||||||||||| |||||||||   ||||| |||| |||||| ||||| ||||  |||| ||||||||||||||||||||    
T  42711274 gtagtttagtggttagaattcacatttttcaaggcaaataagtgggatgtccggagttcaaatcctgacccctgcatataacaatgtatgt 42711184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 216123 - 216220
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| ||||||||||||||||||||||    
T  216123 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtcc 216220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 692683 - 692780
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| ||||||||||||||||||||||    
T  692683 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtcc 692780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 696892 - 696989
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| ||||||||||||||||||||||    
T  696892 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtcc 696989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 729746 - 729843
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| ||||||||||||||||||||||    
T  729746 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtcc 729843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 853641 - 853738
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| ||||||||||||||||||||||    
T  853641 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtcc 853738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 303
Target Start/End: Original strand, 25470825 - 25470917
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    ||||||| ||| || ||||||||||||| |||||| |||||||||||||||||||| ||||||| | |||||  || |||||| |||| ||||    
T  25470825 aagtagtctagtggctagaattcaccttcttcaaggtgaataaatggggtgtccgaggttcgaaccccgacccatgaatataataatgcatgt 25470917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 33570407 - 33570495
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||| || ||||||||||||| |  ||| ||||||| |||||||||||| ||||||| | |||||  ||||||||||||||    
T  33570407 gtcaagtagtttagtggctagaattcaccttat--aaggtgaataagtggggtgtccgaggttcgaaccccgacccatgcatataacaatg 33570495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 14011029 - 14011111
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||| ||||| ||||||||||| |||| ||||||| |||||||   || || ||||||||||||||| ||||||    
T  14011029 ggttagaattcacattttttaagatgaataagtgggatgtccgaggttcgaactccggcccctgcatataacaatgcatgtcc 14011111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 11900683 - 11900632
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggt 260  Q
    |||| |||||||| || |||||||||||||||||||||||||||| ||||||    
T  11900683 tcaaatagtttagtggctagaattcacctttttcaagatgaataagtggggt 11900632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 22847256 - 22847335
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||||| ||| ||||||| || |||||  |  ||||||| ||||||| ||||||||||||||| ||||||    
T  22847256 tagaattcaccttttttaaggtgaataagtgaggtgtgtggggttcgaacctcgacccctgcatataacaatgcatgtcc 22847335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 36130514 - 36130568
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 262  Q
    ||||| |||||||| |||||||||||| ||||| |||| ||||||||||||||||    
T  36130514 gtcaaatagtttagtggttagaattcagcttttgcaagctgaataaatggggtgt 36130568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 305
Target Start/End: Complemental strand, 7345530 - 7345450
Alignment:
Q  225 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||| ||| ||||||| ||||||||  | |||| ||| | ||||| |||||||||| |||| ||||||    
T  7345530 ttagaattcaccttttttaaggtgaataagtggggtgtttggagttggaagcccgacccctgcatataataatgcatgtcc 7345450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 26900518 - 26900445
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 301  Q
    |||||||||||||||  |||||||||||||||||||||||| ||| ||| ||| | | ||  ||||||||||||||    
T  26900518 tagaattcacctttt--aagatgaataaatggggtgtccgaggtttgaacctcaatccctatatataacaatgtat 26900445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 13537289 - 13537377
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||| || || |||||||||| |  ||||||||||| ||||||||| |  ||||||| | ||||  |||||||||||||||    
T  13537289 gtcaagtagtttagtggctacaattcaccttat--aagatgaataagtggggtgtctggggttcgaaccccgacacctgcatataacaatg 13537377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 13626837 - 13626925
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||| || || |||||||||| |  ||||||||||| ||||||||| |  ||||||| | ||||  |||||||||||||||    
T  13626837 gtcaagtagtttagtggctacaattcaccttat--aagatgaataagtggggtgtctggggttcgaaccccgacacctgcatataacaatg 13626925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 12926457 - 12926511
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 265  Q
    ||||||| ||| || ||||||| |||||||||||||||||||| || ||||||||    
T  12926457 aagtagtctagtggctagaatttacctttttcaagatgaataagtgaggtgtccg 12926511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 39208845 - 39208903
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccga 266  Q
    |||||||||| ||| || |||||||||||||||| ||| ||||||| || |||||||||    
T  39208845 gtcaagtagtctagtggctagaattcacctttttaaaggtgaataagtgaggtgtccga 39208903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 1028531 - 1028626
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| ||||| ||||||| ||||| ||||||||||||| || | ||||| ||||||| | ||||| || ||||||| |||| ||||||    
T  1028531 gtcaagtagtctagtggttaaaattcactttttt-aagatgaataaattggatatccgaggttcgaaccccgacc-ctacatataataatgcatgtcc 1028626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 43468701 - 43468771
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||| |  ||| ||||||| ||||||||||| |||||||| | ||||| || ||||||||||||    
T  43468701 tagaattcaccttat--aaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataacaatg 43468771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 28979124 - 28979048
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||| ||||| ||| ||||||| || ||||||||  ||||||||  ||||| || |||||||||||| ||||||    
T  28979124 aattcacattttttaaggtgaataagtgaggtgtccggggttcgaattccgacccctacatataacaatgcatgtcc 28979048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 38040363 - 38040288
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||| ||||||| ||||||||||||||| ||||||    
T  38040363 aattcacctttttcaagatgaataagtgggatgtccg-agttcgaacctcgacccctgcatataacaatgcatgtcc 38040288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 6291099 - 6291018
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||||||||  ||||||||||||||||| |  ||||||| ||| |||| | |||||||||||||||||||    
T  6291099 ggttagaattcacctttttcaatgtgaataaatggggtgtctggggttcgaacctcaacca-tacatataacaatgtatgtcc 6291018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 13754107 - 13754032
Alignment:
Q  224 gttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 301  Q
    ||||||||||||||| |  |||||||||||||||||||||||| |||||||  |||||| |||||||||| |||||||    
T  13754107 gttagaattcaccttat--aagatgaataaatggggtgtccgacgttcgaacatcgacccctgcatataataatgtat 13754032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 304
Target Start/End: Complemental strand, 40384367 - 40384274
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    ||||||||||| || |||||||||||||||| ||| ||||||| ||||||||||| |||||||| | |  || |||||||||| |||| |||||    
T  40384367 aagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccggagttcgaaccccagccgctgcatataataatgcatgtc 40384274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 27006441 - 27006369
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||||||||| ||||||| ||| ||||||| |||||||| | ||||| | |||||||||||||    
T  27006441 tagaattcacctttttcaaggtgaataagtggagtgtccggagttcgaaccccgaccccagcatataacaatg 27006369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 29561767 - 29561712
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  29561767 gtcaactagtttagtggttagaattcacctttttcaagatgaataagtgggatgtc 29561712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 31556919 - 31556840
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||| |||||||| ||||||| |||||||||||  |||||||   ||||| ||||||||||||||| ||||||    
T  31556919 tagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaactccgacccctgcatataacaatgcatgtcc 31556840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 38361586 - 38361507
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| |||||||||  |||||||||||||||| || ||||||||  || || |||||||| |||||||||||||    
T  38361586 tagaattcacatttttcaaggagaataaatggggtgtctgaggttcgaattccggcccctgcatatcacaatgtatgtcc 38361507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 306
Target Start/End: Original strand, 7147013 - 7147093
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcct 306  Q
    |||||||||||||||||||  | |||||||| |||||| || ||||||| | ||||| |||||||||| |||| |||||||    
T  7147013 tagaattcacctttttcaatgtaaataaatgaggtgtcagaggttcgaaccccgacccctgcatataataatgcatgtcct 7147093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 42553117 - 42553212
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    ||||| ||||||||  |||||||||||| ||||||||| ||||||| ||  |||||||  ||||||| | ||||| ||||||||||||||| |||||    
T  42553117 gtcaaatagtttagttgttagaattcacatttttcaaggtgaataagtgtagtgtccggggttcgaaccccgacc-ctgcatataacaatgcatgtc 42553212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 13862228 - 13862154
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||| |||||||||||| |||||| |||||||||||  |||||||   ||||| |||||||||||||||    
T  13862228 ggttagaattctcctttttcaagaagaataagtggggtgtccg-ggttcgaactccgacccctgcatataacaatg 13862154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 303
Target Start/End: Original strand, 42260696 - 42260791
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||| |||||||||  | ||||||||| |||||| ||| ||||||| |||| |||||| |||||||| | ||| | ||||||||||||||| ||||    
T  42260696 gtcaggtagtttagtagctagaattcatctttttaaaggtgaataagtgggatgtccggagttcgaaacccgaaccctgcatataacaatgcatgt 42260791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 305
Target Start/End: Original strand, 11246473 - 11246567
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||| ||| || |||||||||||||||||||| ||||||| |||| |||| |  ||| ||  | ||||| ||||||||||||||| ||||||    
T  11246473 aagtagtctagtggctagaattcacctttttcaagctgaataagtgggatgtctggggtttgagccccgacccctgcatataacaatgcatgtcc 11246567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 10192868 - 10192956
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||  ||||| ||||||| |||||||| ||||||||||| |||||||||||  |||  |||||||||| || | ||||||||||    
T  10192868 tcaagtagtccaggggctagaattaaccttttt-aagatgaataagtggggtgtccgtggtttaaatctcgacccctacttataacaatg 10192956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 18536033 - 18535988
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataa 253  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  18536033 gtcaagtagtttagtggttagaattcacttttttcaaggtgaataa 18535988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 22687862 - 22687911
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 262  Q
    ||||| ||| ||||||||||||||||||||||| ||||||| ||||||||    
T  22687862 gtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgt 22687911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 28537254 - 28537157
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||  ||| || ||||||||||| |||||||  ||||||| |||||||||||  ||||||| | || ||  |||||||||||||| ||||||    
T  28537254 gtcaagtagcctagtggctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaaccccggcccatgcatataacaatgcatgtcc 28537157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 22396982 - 22397030
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    ||||||||||| |||||||||||||||| |||||||||||  |||||||    
T  22396982 tagaattcacccttttcaagatgaataagtggggtgtccggggttcgaa 22397030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 4429262 - 4429207
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    ||||| |||||||  |||||||||||| |||||| ||||||||||| |||||||||    
T  4429262 gtcaaatagtttaatggttagaattcatcttttttaagatgaataagtggggtgtc 4429207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 31710032 - 31709966
Alignment:
Q  236 ctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||||||||| ||||||||||| || ||||| ||||||||||| ||| || ||||||||||| |||||    
T  31710032 ctttttcaaggtgaataaatggagt-tccgaggttcgaatctcaacccctacatataacaatatatgt 31709966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 298
Target Start/End: Original strand, 38129004 - 38129079
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||| | |||||||| ||||||| ||| ||||||   ||||||| | ||||| |||||||||||||||    
T  38129004 ggttagaattcatcattttcaaggtgaataagtggagtgtccagggttcgaaccccgacccctgcatataacaatg 38129079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 3535927 - 3536009
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||| ||||| ||| ||||||| |||||||||||  ||||||| | || |  ||| ||||||||||| ||||||    
T  3535927 ggttagaattcactttttttaaggtgaataagtggggtgtccggggttcgaaccccggctcctgtatataacaatgcatgtcc 3536009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 9408933 - 9409016
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||| |||||||||||| ||| |  ||| |||||||||| ||||||||  |||||||   ||||| |||||||||||||||    
T  9408933 gtagtttagtggttagaattcatcttat--aagttgaataaatgaggtgtccggggttcgaactccgacccctgcatataacaatg 9409016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 14077233 - 14077286
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 262  Q
    ||||||||||||| ||||||||||||||||||  || || ||||| ||||||||    
T  14077233 tcaagtagtttagtggttagaattcaccttttataaaataaataagtggggtgt 14077286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 35813219 - 35813315
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||  ||| || ||||||||||||||||||| | |||||| ||||||||||   ||||||| ||   || ||||||||||||||| ||||||    
T  35813219 gtcaagtagcctagtggctagaattcacctttttcaa-aggaataagtggggtgtcctgggttcgaacctgagcccctgcatataacaatgcatgtcc 35813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 37986844 - 37986933
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||  ||| || |||||||||||||||||||| ||||||| |||| ||||||  |||| ||   ||||| |||||||||| ||||    
T  37986844 tcaagtagcctagtggctagaattcacctttttcaaggtgaataagtgggatgtccggggttcaaactccgacctctgcatataataatg 37986933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 41539415 - 41539378
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  41539415 tagaattcacctttttcaagattaataagtggggtgtc 41539378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 9963518 - 9963445
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||| || |  ||| ||||||| ||||| |||||||||||||| | | ||| |||||||||||||||    
T  9963518 ggttagaattcactttat--aaggtgaataagtggggggtccgaagttcgaaccccaacccctgcatataacaatg 9963445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 10106731 - 10106683
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||  ||||||||||||||||||| |||||||||||  |||||||    
T  10106731 tagaatttgcctttttcaagatgaataagtggggtgtccggggttcgaa 10106683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 31907741 - 31907673
Alignment:
Q  237 tttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||| ||||||| |||||||| ||| ||| ||| |  |||| ||||||||||||||| ||||||    
T  31907741 tttttcaaggtgaataagtggggtgttcgaggtttgaaccatgacccctgcatataacaatgcatgtcc 31907673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 39684342 - 39684262
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    ||||||||||||||||||| ||| ||||||| |||| ||||||  |||  ||||  |||| || |||||||||||| ||||    
T  39684342 ggttagaattcaccttttttaaggtgaataagtgggatgtccggggtttaaatcctgacccctacatataacaatgcatgt 39684262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 1589139 - 1589229
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    ||||||||| || |||||||||||||||| |||||||||||||||| ||||||  |||||||||  |||| ||||||||||||||| |||||    
T  1589139 gtagtttagtggctagaattcaccttttt-aagatgaataaatgggatgtccggggttcgaatcctgacccctgcatataacaatgcatgtc 1589229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 227 - 305
Target Start/End: Complemental strand, 36045930 - 36045852
Alignment:
Q  227 agaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||||||| |||| ||| || |||||||| |||||||||||| ||| ||||||||||||||| ||||||    
T  36045930 agaattcacctttttcaatatgactaagtgaggtgtccggagttcgaatctcaacccctgcatataacaatgcatgtcc 36045852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 33359918 - 33359839
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||||||||| ||||||| ||||||||||   ||||||| |||||||  |||||||||||||| ||||||    
T  33359918 tagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaacctcgacccttgcatataacaatgaatgtcc 33359839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 49743481 - 49743391
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||| ||||| ||||||||||||||||| | ||||| || ||||||||  ||||||||| || || |||||||||| ||||    
T  49743481 gtcaagtagtttagtggttaaaattcacctttttcaaggtaaataagtgaggtgtccggggttcgaatcccggcccctgcatataataatg 49743391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 20610858 - 20610761
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||| ||||| ||| || |||||||||||||||| ||| ||||||| |||| |||||| |||||||| | || || ||||||||||||||| ||||||    
T  20610858 gtcaggtagtctagtggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaaccccggcccctgcatataacaatgcatgtcc 20610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 9084843 - 9084788
Alignment:
Q  243 aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||| |||||||||||| ||||||||| ||||| |||||||||||||||    
T  9084843 aagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatg 9084788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 11084227 - 11084318
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaaga-tgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||  ||| |||||||||||||||||||  | | ||||||||||||||||||  |||||||||| ||||| |||||||||| ||||    
T  11084227 gtcaagtagcatagtggttagaattcacctttttttaaagtgaataaatggggtgtcccgagttcgaatcccgacccctgcatataaaaatg 11084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 54414042 - 54413974
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||| ||||||||  ||||||||||||||||||||| |||||||| ||||| || ||||||||||||    
T  54414042 aattcacttttttcaaagtgaataaatggggtgtccgaa-ttcgaatcccgaccgctacatataacaatg 54413974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 4419662 - 4419758
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||| ||| ||||||||||||| ||||||||| |||||||||| ||||| |   ||| ||| | || || ||||||||||||||| |||||    
T  4419662 gtcaagtagtgtagcggttagaattcacttttttcaaggtgaataaatgaggtgttctgggtttgaaccccggcccctgcatataacaatgcatgtc 4419758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 47416582 - 47416502
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 293  Q
    |||| |||| ||||||||||||||||||||||  ||||||| ||||||||||||  |||||| | | ||| ||||||||||    
T  47416582 gtagcttagtggttagaattcacctttttcaaagtgaataagtggggtgtccgagattcgaaccccaacccctgcatataa 47416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 9302634 - 9302689
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    |||||||||| ||| | ||| ||||||||||||||||| |||||||||||||||||    
T  9302634 gtcaagtagtctagtgattaaaattcacctttttcaaggtgaataaatggggtgtc 9302689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 35122164 - 35122073
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaa-gatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||| |  ||||||| || |||||||| | |||||||||||||||| ||   |||||||||||||| || ||||||||||||    
T  35122164 gtcaagtagtttagtgtatagaatttacttttttcaaaggtgaataaatggggtgttcgggattcgaatctcgacccctacatataacaatg 35122073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 49039439 - 49039518
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||||||||| ||||||| |||||||||||  ||||||| | |   | ||||||||||||||| ||||||    
T  49039439 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatataacaatgcatgtcc 49039518  T

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Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 6202722 - 6202656
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    ||||||||| |||| |  |||||||||||||||||||||||||||| | |||||||||  |||||||    
T  6202722 gtcaagtagcttagtgactagaattcacctttttcaagatgaataagtagggtgtccggggttcgaa 6202656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 35230271 - 35230361
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||| ||| || || ||||||||| ||||||| | ||||| |||||||||||| ||||||| | |||||  |||||||| |||||    
T  35230271 gtcaagtagtctagtggctaaaattcacctatttcaaggtaaataagtggggtgtccgaggttcgaaccccgacccatgcatatagcaatg 35230361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 43115348 - 43115302
Alignment:
Q  247 tgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 293  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  43115348 tgaataaatggggtgtccggggttcgaatctcgacccctgcatataa 43115302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 55677224 - 55677158
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||||||| ||||||||||||| | ||||||  ||||||| ||| ||||||| ||||||||    
T  55677224 gtcaagtagtttagtggttagaattcacttatttcaaagtgaataagtggagtgtccggagttcgaa 55677158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 55967682 - 55967601
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||||||| |||||||   |||||| |||||||||||  |||||||| | | || ||||||||||||||| |||||    
T  55967682 ggttagaattcaccattttcaatgcgaataagtggggtgtccggggttcgaattttgtcccctgcatataacaatgcatgtc 55967601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 12585537 - 12585589
Alignment:
Q  210 caagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 262  Q
    |||||||| ||| || |||||||||||||||||||||||||||| || |||||    
T  12585537 caagtagtctagtggctagaattcacctttttcaagatgaataagtgaggtgt 12585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 21023343 - 21023383
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  21023343 ggttagaattcacctttttcaaggtgaataagtggggtgtc 21023383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 32887229 - 32887153
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||| ||||||||||| ||||| ||||||||||| |||||||| | ||||  | |||||||| |||||| ||||    
T  32887229 aattcacatttttcaagattaataagtggggtgtccggagttcgaaccacgactccggcatataaaaatgtacgtcc 32887153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 41492493 - 41492571
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||||||||| | ||||| |||||||||| | ||||||| | || || |||||||||| |||| ||||||    
T  41492493 tagaattcacctttttcaaggtaaataagtggggtgtcc-aggttcgaaccccggcccctgcatataataatgcatgtcc 41492571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 47094116 - 47094178
Alignment:
Q  212 agtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||| ||||||||||| |||||||||| | ||| || ||| ||||||| ||||||||    
T  47094116 agtagtttagtggttagaattctcctttttcaaaaagaagaagtggagtgtccggagttcgaa 47094178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 21664197 - 21664152
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataa 253  Q
    |||||||||  ||| ||||||||||||||||| |||||||||||||    
T  21664197 gtcaagtagcctagtggttagaattcacctttctcaagatgaataa 21664152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 21672961 - 21672916
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataa 253  Q
    |||||||||  ||| ||||||||||||||||| |||||||||||||    
T  21672961 gtcaagtagcctagtggttagaattcacctttctcaagatgaataa 21672916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 37032175 - 37032245
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||| |  ||| ||||||| |||||||||||  ||||||||| ||||| |||||||||| ||||    
T  37032175 tagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaatcccgacccctgcatataataatg 37032245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 49319492 - 49319415
Alignment:
Q  229 aattcaccttttt-caagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||| |||| ||||||| |||||||||||  ||| ||| | ||||| |||||||||| |||| ||||||    
T  49319492 aattcaccttttttcaaggtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcatgtcc 49319415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 53621313 - 53621222
Alignment:
Q  212 agtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||| ||||| ||| ||||||||||| ||||| ||||||| ||||||||| |  ||||||||| ||| | ||| ||||||||||| ||||||    
T  53621313 agtagtgtagggattaaaattcacctttctcaaggtgaataagtggggtgtctg-ggttcgaatcccga-ctctgtatataacaatgcatgtcc 53621222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 305
Target Start/End: Original strand, 56865 - 56933
Alignment:
Q  237 tttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||| |||||||||||||||| || ||||||||   || ||  |||||||||||||| ||||||    
T  56865 tttttcaaggtgaataaatggggtgttcggagttcgaactccggcccttgcatataacaatgcatgtcc 56933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 16336466 - 16336546
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    ||||| ||||||||||||||||||| |||||| ||| ||| | | ||||||| | | ||| || |||||||||||| ||||    
T  16336466 ggttaaaattcacctttttcaagatcaataaacgggatgttcaaggttcgaaccccaacccctacatataacaatgcatgt 16336546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 298
Target Start/End: Complemental strand, 31480385 - 31480300
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||| ||| ||||||||||||| ||||  ||| ||||||| |||||||| ||  |||||||| ||  || |||||||||||||||    
T  31480385 aagtagtctagtggttagaattcacgtttt--aaggtgaataagtggggtgttcggggttcgaatttcagcccctgcatataacaatg 31480300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 298
Target Start/End: Complemental strand, 32885802 - 32885717
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||| |||| || ||||||||||||| |  ||| ||||||| |||||||||||| |||||||   ||||| |||||||||| ||||    
T  32885802 aagtagcttagtggatagaattcaccttat--aaggtgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatg 32885717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 34684679 - 34684594
Alignment:
Q  214 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 301  Q
    |||| ||| |||||||||||||||| |  ||| ||||||| ||||||||| || ||||||||  | ||| |||||||||| |||||||    
T  34684679 tagtgtagtggttagaattcaccttat--aaggtgaataagtggggtgtctgaggttcgaattccaacctctgcatataataatgtat 34684594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 298
Target Start/End: Original strand, 41003165 - 41003237
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||| ||| |  ||| ||||||| ||||||||||| |||||||| ||| ||| |||||||||||||||    
T  41003165 ggttagaattcatcttgt--aaggtgaataagtggggtgtccggagttcgaa-ctcaacccctgcatataacaatg 41003237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 24579263 - 24579357
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    ||||||||||||| || |||||||||||||||||||| ||||||| ||||||||| |  |||||||||||  || |||||||||| |||| ||||    
T  24579263 tcaagtagtttagtggatagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaatctcatcccctgcatataataatgcatgt 24579357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 303
Target Start/End: Complemental strand, 43635707 - 43635612
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||||||||||||| || ||||||||||| |||  ||| ||||||| |||||||||||  ||||||| | ||||| ||||||||||||||| ||||    
T  43635707 gtcaagtagtttagtggctagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaaccccgaccgctgcatataacaatgcatgt 43635612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 11808158 - 11808060
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttc-aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| |||  |||||||||||| |||||| ||| ||||||| |||||||||||  ||||||| | ||||| ||||||||||||||| ||||||    
T  11808158 gtcaagtagtctagttgttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtcc 11808060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 10020445 - 10020542
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||  ||| || |||||||||||||||||||||||||||| |||| ||| ||  ||||||| | | ||| ||||||||||||||| ||||||    
T  10020445 gtcaagtaggctagtgggtagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatataacaatgcatgtcc 10020542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 38328547 - 38328639
Alignment:
Q  212 agtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||||||  |  ||||||| ||| |   ||||||||||||||||||||||    
T  38328547 agtagtttagtggttagaattaacctttttcaaggtgaataaatggggtgtttggggttcgaa-ctccagtcctgcatataacaatgtatgtcc 38328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 38363272 - 38363183
Alignment:
Q  214 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||| ||| ||||||||||||||||||| |||||||||||||| ||||| || | ||||||  ||| ||  |||||||||||||||||||    
T  38363272 tagtctagtggttagaattcaccttttttaagatgaataaatgaggtgttcggaattcgaacatcggcccttgcatataacaatgtatgt 38363183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 23470477 - 23470543
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||| ||||| ||| |||||||| ||||||||||||||||||||||||||| ||||||  |||||||    
T  23470477 gtcaggtagtctagtggttagaactcacctttttcaagatgaataaatgggatgtccggggttcgaa 23470543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 23799401 - 23799323
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    ||||||| |||||||| ||   |||||| |||||||||||| ||||||||| ||||| ||||||||||||||| |||||    
T  23799401 tagaattaaccttttttaaagagaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcatgtc 23799323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 8724492 - 8724406
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 301  Q
    ||||||||| | |||||||||||||| |  ||| ||||||| |||||||||||| |||||| || ||||| |||||||||| |||||||    
T  8724492 gtagtttagtgattagaattcaccttat--aaggtgaataagtggggtgtccgaggttcgattcccgacctctgcatataataatgtat 8724406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 35498516 - 35498420
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||| | ||| || |||||||||||||||||||  ||||||| |||||||||||||||| ||| | | ||| |||||||||| |||| ||||||    
T  35498516 gtcaagtaatatagtggctagaattcacctttttcaaagtgaataagtggggtgtccgaagtttgaa-cccaacccctgcatataataatgcatgtcc 35498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 42976576 - 42976673
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| |||  | |||||||||||||||| ||  ||||||| ||| ||||||| |||||||| ||||| | || | |||||||||||||||||    
T  42976576 gtcaagtagtctagtaggtagaattcaccttttttaaagtgaataagtggagtgtccgtagttcgaacctcgatccctacctataacaatgtatgtcc 42976673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 43712289 - 43712386
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||| ||||||||| || |||||||| |||||||||||  | |||| |||||| ||||| ||||||| | ||||| ||| ||||||||||| ||||||    
T  43712289 gtcaggtagtttagtggctagaattctcctttttcaaggaggataagtggggtatccgaggttcgaaccccgacccctgtatataacaatgcatgtcc 43712386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 32309125 - 32309221
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||| ||| || |||||||||| ||||| ||| ||||||| ||||||||| ||  ||||||   ||||| ||||||||||||||| ||||||    
T  32309125 tcaagtagtctagtggctagaattcacattttttaaggtgaataactggggtgtctgagattcgaactccgacccctgcatataacaatgcatgtcc 32309221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 35195961 - 35195865
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||| ||||| |  ||||| |||||||||||||| |||||||||||||||| ||  ||||||| | || || |||||||||| |||| ||||||    
T  35195961 tcaagtaatttagtgactagaagtcacctttttcaaggtgaataaatggggtgttcggggttcgaaccccggcccctgcatataataatgcatgtcc 35195865  T

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Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 5773232 - 5773151
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggg--gtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||| ||||||||||||| ||||||| ||||  |||||||  ||||||| ||||||| || |||||||||||| ||||||    
T  5773232 tagaatccacctttttcaaggtgaataagtgggatgtgtccggggttcgaacctcgacccctacatataacaatgcatgtcc 5773151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 7162660 - 7162734
Alignment:
Q  224 gttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||||||||||||||||||| |||  | | |  |||||||| | ||||| |||||||||||||||    
T  7162660 gttagaattcacctttttcaagatgaataagtggaatattcagagttcgaaccccgacccctgcatataacaatg 7162734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 38854000 - 38854050
Alignment:
Q  224 gttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||||    
T  38854000 gttagaattcaccttttacaagataaataaatggggtgtctggagttcgaa 38854050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 44409304 - 44409223
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||  ||||||| | |||||  ||||||||| |||| ||||||    
T  44409304 ggttagaattcacctttttcaaggtgaataagtggggtgttcg-ggttcgaaccccgacccttgcatataataatgcatgtcc 44409223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 2567813 - 2567898
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||| ||| ||||||||||||||||||||||| | ||||| ||||||| |||  ||||||| | || || |||||||||| ||||    
T  2567813 gtagtctagtggttagaattcacctttttcaaggttaataagtggggtgaccggggttcgaaccccggcccctgcatataaaaatg 2567898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 27726345 - 27726442
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| |||||||||||||||||| |||   ||||||   |||||||||| ||||||| | || ||||||| ||||| |||| ||||||    
T  27726345 gtcaagtagtctagtggttagaattcaccttttccaaagcgaataagcagggtgtccgaggttcgaaccccggccactgcttataataatgcatgtcc 27726442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 37410462 - 37410555
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcct 306  Q
    ||||| ||| || |||||||| || |||| |||  |||||| || |||||||| |||||||| || |||| ||||||||||||||| |||||||    
T  37410462 gtagtctagtggctagaattctccctttttaaggagaataagtgaggtgtccggagttcgaaccttgacccctgcatataacaatgcatgtcct 37410555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 45198094 - 45198164
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||| |  ||| |||||||||||||||||||  ||||||||||| | |||||||||||| ||||    
T  45198094 tagaattcaccttat--aaggtgaataaatggggtgtccggggttcgaatctcaatcactgcatataataatg 45198164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 19837304 - 19837384
Alignment:
Q  225 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||| |||| || |||||||| | |||||||||| ||| ||| | ||||  ||||||||||||||| ||||||    
T  19837304 ttagaattcaccattttgaaaatgaataagttgggtgtccgaggtttgaaccgcgacacctgcatataacaatgcatgtcc 19837384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 27454107 - 27454050
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgca 288  Q
    ||||||||||||  ||||||||||| |||||||||||| ||||||| ||||||| |||||    
T  27454107 aattcacctttt--aagatgaataagtggggtgtccgaggttcgaacctcgacccctgca 27454050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 303
Target Start/End: Original strand, 7392282 - 7392377
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||||||||||||| || || ||||||  ||||||||| ||||||| |||||||| ||  |||| || | | ||| ||||||||||||||| ||||    
T  7392282 gtcaagtagtttagtggctataattcatatttttcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatataacaatgcatgt 7392377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 13906053 - 13905970
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataac 294  Q
    ||||||||||| |||||||||||| |||||| ||  | ||||| |||||||| || ||||||||  || ||| |||||||||||    
T  13906053 aagtagtttagtggttagaattcaacttttttaaagtaaataagtggggtgttcggagttcgaacatcaacccctgcatataac 13905970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 19687282 - 19687329
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatc 276  Q
    ||||||| ||||||||||||||||| ||||||||||| | ||||||||    
T  19687282 aattcacttttttcaagatgaataagtggggtgtccggaattcgaatc 19687329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 16916576 - 16916486
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||| |||| || || |||| | |||||| ||| ||||||| || ||||||||||||||||| | ||||| || |||||| |||||    
T  16916576 gtcaagtagcttagtggctaaaatttatcttttttaagctgaataagtgaggtgtccgaagttcgaaccccgacccctacatatagcaatg 16916486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 21877668 - 21877714
Alignment:
Q  228 gaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||| ||||||||||||||||||||| |||||||| ||| |||||||    
T  21877668 gaatccacctttttcaagatgaataagtggggtgttcgaggttcgaa 21877714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 24427456 - 24427386
Alignment:
Q  234 acctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||| ||||||| |||||||||||||| | ||  ||||||| || |||| ||||||||||||||| |||||    
T  24427456 acctatttcaaggtgaataaatggggtattcggggttcgaaccttgacccctgcatataacaatgcatgtc 24427386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 36315950 - 36316040
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||| ||||  |||||||||||| || |  ||| ||||||| |||||||||||| ||||||| | || || |||||||||| ||||    
T  36315950 gtcaagtagcttagttgttagaattcactttatataaggtgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatg 36316040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 39524806 - 39524717
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||  |||| || |||||||||||||||||||  | |||||||| ||||| || | |||||| ||| ||| |||||||||||||||    
T  39524806 gtcaagtaacttagtggatagaattcacctttttcaaagtaaataaatgaggtgttcgga-ttcgaacctcaacccctgcatataacaatg 39524717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 3481146 - 3481234
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||| |||||||||||||| |||| ||| ||||||| || ||| | || |||||||| | || |  |||||||||||||||    
T  3481146 tcaagtagtttagtggttagaattcaccatttttaaggtgaataagtgaggtat-cggagttcgaaccccggctcctgcatataacaatg 3481234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 17997716 - 17997770
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtcc 264  Q
    |||||||||| ||| || |||||||||||||||  ||| ||||||||||||||||||    
T  17997716 gtcaagtagtctagtggctagaattcacctttt--aaggtgaataaatggggtgtcc 17997770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 25200687 - 25200634
Alignment:
Q  212 agtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 265  Q
    |||||||||| || |||||||||   ||||||| ||||||||||||||||||||    
T  25200687 agtagtttagtggctagaattcattattttcaatatgaataaatggggtgtccg 25200634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 26734265 - 26734302
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  26734265 tagaattcacctttttcaaggtgaataagtggggtgtc 26734302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 31694148 - 31694099
Alignment:
Q  249 aataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||| ||||||||||| ||||||||||||| || |||||||||| ||||    
T  31694148 aataagtggggtgtccggagttcgaatctcgtcccctgcatataataatg 31694099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 32814946 - 32814849
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||  || ||||| |||||||||||||  | |||||||| |||||||||||   ||||||   ||||| |||||||||| |||| ||||||    
T  32814946 gtcaagtagtccagtggttaaaattcacctttttttatatgaataagtggggtgtccgggattcgaactccgacccctgcatataataatgcatgtcc 32814849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 41000879 - 41000794
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 293  Q
    |||||||||| | | ||||||||||||| ||||| ||| ||||||| |||| ||| ||   |||||||||||| | ||||||||||    
T  41000879 gtcaagtagtctggtggttagaattcacattttttaaggtgaataagtgggatgttcgggattcgaatctcgatctctgcatataa 41000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 41222227 - 41222264
Alignment:
Q  269 ttcgaatctcgaccactgcatataacaatgtatgtcct 306  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  41222227 ttcgaatctcgacccctgcatataacaatatatgtcct 41222264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 44843802 - 44843721
Alignment:
Q  214 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||| ||| |||||||||||||||| |  |||||||||||||||||||||||  ||||||| | ||||| || ||||||| ||||    
T  44843802 tagtctagtggttagaattcaccttat--aagatgaataaatggggtgtccg-ggttcgaaccccgacccctacatataataatg 44843721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 45314511 - 45314433
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||| ||||||||||||||||| |||| |||| |||||||||| | ||||| ||||||||||||||| |||||    
T  45314511 tagaattcacatttttcaagatgaataagtgggatgtctgaagttcgaaccccgacctctgcatataacaatgcatgtc 45314433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 1244683 - 1244591
Alignment:
Q  213 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||| ||| || |||||||||||||||||||| ||||||| |||||||||||  ||||||| | | ||| ||||||||| ||||||||||||    
T  1244683 gtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagcaatgtatgtcc 1244591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 17240003 - 17239930
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||||| |  ||||||||||| |||||||||||| ||||||||| ||||| |||||||||| ||||    
T  17240003 ggttagaattcaccttat--aagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataataatg 17239930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 22355184 - 22355104
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcct 306  Q
    ||||||||||||||| |||| ||||||| ||||||||| | |||||||| ||| ||| ||||| ||||||||| |||||||    
T  22355184 tagaattcaccttttgcaaggtgaataagtggggtgtctggagttcgaaactcaacccctgcacataacaatgcatgtcct 22355104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 38581582 - 38581677
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||  ||| ||||||||| ||||||||| ||||||||||| |||| ||||||| ||||||||||| | |  ||||||||| ||||||||||    
T  38581582 gtcaagtagcctagtggttagaatacaccttttttaagatgaataagtgggatgtccgaggttcgaatctc-aacgttgcatataataatgtatgtc 38581677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 44132568 - 44132635
Alignment:
Q  237 tttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||||||||||| |||||||| | |||||||| | ||||| ||||||||||||||| |||||    
T  44132568 tttttcaagatgaataaacggggtgtctggagttcgaaccccgacctctgcatataacaatgcatgtc 44132635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 37123287 - 37123209
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    ||||||||| |||||| ||  ||||||| | ||||||||| |||||||||||||||| |||||||||| |||| |||||    
T  37123287 tagaattcatcttttttaaagtgaataagtagggtgtccggagttcgaatctcgacccctgcatataataatgcatgtc 37123209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 25463242 - 25463339
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||  ||| ||||||||||||  ||||||||| |||||||| ||||||| || |||||||| ||| | | ||| ||||||||||| ||||||    
T  25463242 gtcaagtagcctagtggttagaattcatttttttcaaggtgaataaaaggggtgttcggagttcgaacctcaatccctgtatataacaatgaatgtcc 25463339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 2057581 - 2057507
Alignment:
Q  225 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 301  Q
    ||||||||||||||||| ||| ||||||| |||||||||||   |||||| ||||||| ||||||||||||||||||    
T  2057581 ttagaattcaccttttttaaggtgaataagtggggtgtccgggattcgaa-ctcgacc-ctgcatataacaatgtat 2057507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 14307688 - 14307767
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||||| ||  ||||||| |||||||| ||  ||||||| ||||||| ||||||||||||||| ||||||    
T  14307688 tagaattcactttttttaaagtgaataagtggggtgttcggggttcgaacctcgacccctgcatataacaatgcatgtcc 14307767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 33124341 - 33124412
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcg 279  Q
    |||||||||| ||| ||||||||||||||||||| ||| |||||||||| ||||| ||  ||||||| ||||    
T  33124341 gtcaagtagtatagtggttagaattcaccttttttaaggtgaataaatgtggtgttcggggttcgaacctcg 33124412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 36345158 - 36345252
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    ||||||||||||| || ||||| |||||||||||||||||||||| ||| ||||| | ||||||||   ||  | ||||||||||||||| |||||    
T  36345158 tcaagtagtttagtggctagaactcacctttttcaagatgaataagtggagtgtctg-agttcgaactacggtccctgcatataacaatgcatgtc 36345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 12206599 - 12206522
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||||||||||||||||||| |||||||  ||||||| ||  ||||||| | ||||| ||| |||||| |||||||||    
T  12206599 tagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaaccccgacccctgaatataataatgtatgt 12206522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 42507406 - 42507333
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgacc 282  Q
    ||||||||||| | |  ||||||||||||||||||| |||||||| |||||||||||  |||| |||| |||||    
T  42507406 tcaagtagtttggtgtctagaattcacctttttcaaaatgaataagtggggtgtccggtgttcaaatcccgacc 42507333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 44721700 - 44721770
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||| |  ||| |||||||||||||||||||| ||||||| | ||||| |||||||||| ||||    
T  44721700 tagaattcaccttat--aaggtgaataaatggggtgtccgaggttcgaaccccgacccctgcatataataatg 44721770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 29896137 - 29896193
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtcc 264  Q
    ||||||||||| |  |||||||||||| |||||||||| ||||||| ||||||||||    
T  29896137 gtcaagtagttcaatggttagaattcatctttttcaaggtgaataagtggggtgtcc 29896193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 1962910 - 1962863
Alignment:
Q  243 aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcata 290  Q
    ||||||||||| ||||||||||| |||||||| ||||||| |||||||    
T  1962910 aagatgaataagtggggtgtccggagttcgaacctcgacccctgcata 1962863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 4529760 - 4529835
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    ||||||||||||||||  ||||||| |||||||| || ||||||||   ||||| |||||||||| |||| |||||    
T  4529760 aattcacctttttcaaagtgaataagtggggtgttcggagttcgaactccgacccctgcatataataatgcatgtc 4529835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 11001758 - 11001805
Alignment:
Q  257 gggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||||||||||||| ||||| |||||||||| |||| |||||    
T  11001758 gggtgtccgaagttcgaatcccgacctctgcatataataatgcatgtc 11001805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 17896934 - 17896883
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 262  Q
    ||||||||||| ||||||||||||| ||||| ||| ||||||| ||||||||    
T  17896934 aagtagtttagtggttagaattcacattttttaaggtgaataagtggggtgt 17896883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 2394964 - 2395037
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 297  Q
    ||||||||||||||||||||||| ||||||| ||||   || || ||||||| | ||||| ||||||||||||||    
T  2394964 ggttagaattcacctttttcaaggtgaataagtgggacatctgatgttcgaaccccgacc-ctgcatataacaat 2395037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 3364809 - 3364751
Alignment:
Q  243 aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 301  Q
    ||||||||||| |||||||||  ||||||||| |||| || |||||||||| |||||||    
T  3364809 aagatgaataagtggggtgtctaaagttcgaacctcggcccctgcatataataatgtat 3364751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 23664088 - 23664038
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggg 258  Q
    |||||||||| ||| | ||||||||||| ||||||||| ||||||||||||    
T  23664088 gtcaagtagtctagtgattagaattcacttttttcaaggtgaataaatggg 23664038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 36386090 - 36386179
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||| ||||||  |||||||||||| |||||| ||  ||||||| ||||||||||||  ||| || | ||||| |||||||||||||||    
T  36386090 gtcaagcagtttattggttagaattcatcttttttaaagtgaataagtggggtgtccgagattc-aaacccgacccctgcatataacaatg 36386179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 37065425 - 37065507
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||| ||||||| ||||| ||| ||||| | || ||||  || |||||||| | ||||||||||||||||||||| ||||||    
T  37065425 ggttaaaattcacattttttaaggtgaattagtgaggtgatcggagttcgaaccccgaccactgcatataacaatgcatgtcc 37065507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 39334857 - 39334923
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||| ||| || |||||||||||||||||||  ||||||| |||| |||| | ||||||||    
T  39334857 gtcaagtagtctagtggctagaattcacctttttcaaagtgaataagtgggatgtctggagttcgaa 39334923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 44487743 - 44487809
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||| |||| |||| ||||||||||||||||||| ||| ||||||| |||| ||||||  |||||||    
T  44487743 gtcaggtaggttagtggttagaattcaccttttttaaggtgaataagtgggatgtccggggttcgaa 44487809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 9796996 - 9796926
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||| |  ||||||||||| |||||||||||  ||||||| | ||||| |||||||||| ||||    
T  9796996 tagaattcaccttat--aagatgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatg 9796926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 11133175 - 11133105
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||| |  ||| ||||||| |||||||||||  ||||||| | ||||| |||||||||||||||    
T  11133175 tagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatg 11133105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 22285206 - 22285165
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtcc 264  Q
    |||||||||||||||||||||| |||||||| | ||||||||    
T  22285206 ggttagaattcacctttttcaaaatgaataatttgggtgtcc 22285165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 25406643 - 25406692
Alignment:
Q  225 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||| ||||||| |||| ||||||| ||||||||||| ||||||||    
T  25406643 ttagaattgaccttttccaaggtgaataagtggggtgtccggagttcgaa 25406692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 34830676 - 34830616
Alignment:
Q  237 tttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||  |||||||||||||||||| |||||||| | || || |||||||||||||||    
T  34830676 tttttcaaggagaataaatggggtgtccggagttcgaaccccggcc-ctgcatataacaatg 34830616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 36190151 - 36190078
Alignment:
Q  231 ttcacctttttcaaga-tgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    |||| ||||||||| | ||||||| ||||||||| || ||||||| |||||||  | |||||||||||||||||    
T  36190151 ttcatctttttcaaaagtgaataagtggggtgtctgaggttcgaacctcgacccttacatataacaatgtatgt 36190078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 407594 - 407542
Alignment:
Q  211 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    ||||||||||| ||  | ||||||| ||||||||| |||||||||||||||||    
T  407594 aagtagtttagcggcgaaaattcacttttttcaagctgaataaatggggtgtc 407542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 18065367 - 18065283
Alignment:
Q  214 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||  ||||| ||||||| ||||||||| ||||||| |  ||||| ||  ||||||| ||| ||| |||||||||||||||    
T  18065367 tagtttaatggttaaaattcacatttttcaaggtgaataagtaaggtgttcggggttcgaacctcaacccctgcatataacaatg 18065283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 19905148 - 19905224
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||| ||||||||||||||  || || |||||| |||  |||||| || ||||||| |||| ||||||    
T  19905148 aattcaccttttttaagatgaataaatgatgtatctgaagttagaacatcgacccctacatataataatgcatgtcc 19905224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 25732039 - 25731963
Alignment:
Q  223 ggttagaattcacctttttc-aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||||| |   ||||||||||| |||||||||||| |||||||   ||||| |||||||||| ||||    
T  25732039 ggttagaattcaccttataagaagatgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatg 25731963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 36413858 - 36413782
Alignment:
Q  229 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||  ||||||| ||||||||||   |||||||   || || ||||||||||||||| ||||||    
T  36413858 aattcacctttttcaaagtgaataagtggggtgtccagggttcgaactccggcccctgcatataacaatgcatgtcc 36413782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 41305062 - 41305126
Alignment:
Q  228 gaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatata 292  Q
    |||||||||||||||||| ||||||| |||||| |||| |||| ||| |||  || |||||||||    
T  41305062 gaattcacctttttcaaggtgaataagtggggtatccggagtttgaacctcagcccctgcatata 41305126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 303
Target Start/End: Original strand, 14949016 - 14949091
Alignment:
Q  229 aattcacctttttcaagatgaataaat-ggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||| | ||||| |||||||||| |||||||||    
T  14949016 aattcacctttttcaaggtgaataaatgggggtgtccggagttcgaaccccgacctctgcatataataatgtatgt 14949091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 4844262 - 4844165
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| ||||||||||||| ||||||||| ||||||| || |||||| || |||  || | ||||| ||||||||||||||| ||||||    
T  4844262 gtcaagtagtctagtggttagaattcacttttttcaaggtgaataagtgaggtgtctgaggtttaaaccccgacccctgcatataacaatgcatgtcc 4844165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 26669635 - 26669690
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    |||||||||||||| || |||||||||||||||||||| ||||||| |||||||||    
T  26669635 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtc 26669690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 30833118 - 30833039
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||| |||||||||||  |||||| |||||||||||  ||||||| | ||||| ||||||||||||||| ||||||    
T  30833118 tagaattctcctttttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtcc 30833039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 3037569 - 3037631
Alignment:
Q  212 agtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    ||||| |||| ||||||||||||||||||| ||||||||||| |||| |||| ||||||||||    
T  3037569 agtagcttagtggttagaattcaccttttttaagatgaataagtgggttgtctgaagttcgaa 3037631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 32057150 - 32057063
Alignment:
Q  209 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    ||||||||||||| |||||||||||||||| |  ||||||||||| |||| | || |  ||||||| |||||||||||||||||| ||||    
T  32057150 tcaagtagtttagtggttagaattcaccttat--aagatgaataagtgggatctctggggttcgaacctcgaccactgcatataataatg 32057063  T

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Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 29204860 - 29204941
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    ||||||||||||| ||||| ||| ||||||| |||||||| ||||||||||| | ||||| | |||||||| | ||||||||    
T  29204860 ggttagaattcactttttttaaggtgaataagtggggtgttcgaagttcgaaccccgacctccgcatataatattgtatgtc 29204941  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 1488190 - 1488111
Alignment:
Q  225 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||||||||||| |||| ||| ||||||||||||||||  |  ||||||| | ||||| ||||||||||||||| |||||    
T  1488190 ttagaattcaccatttttaaggtgaataaatggggtgtttggggttcgaaccccgacctctgcatataacaatgcatgtc 1488111  T

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Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 7234066 - 7233995
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 297  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||| || | |  || ||||||||||||||    
T  7234066 tagaattcacctttttcaaggtgaataagtggggtgtccgaggttcaaaccccagcccctgcatataacaat 7233995  T

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Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 19680242 - 19680321
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||||||  |||||| |||||||||||  ||||||| | || |  ||||||||||||||| ||||||    
T  19680242 tagaattcacctttttcaaggagaataagtggggtgtccggggttcgaaccccggctcctgcatataacaatgcatgtcc 19680321  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 16110985 - 16111030
Alignment:
Q  225 ttagaattcacctttttcaagatgaataaatggggtgtccgaagtt 270  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||    
T  16110985 ttagaattcacctttttcaagataaataagtgaggtgtccgaagtt 16111030  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 34524976 - 34524897
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||| || ||||||| |||||||| ||  | ||||| | || || ||||||||||||||| ||||||    
T  34524976 tagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtcc 34524897  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 9031886 - 9031788
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacct-ttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| ||||||||||||||| ||||  | |||||||| ||||||||| || |||| ||  || | | ||||||||||||||| ||||||    
T  9031886 gtcaagtagtctagtggttagaattcaccttttttttaaatgaataagtggggtgtctgaggttcaaacttcaagccctgcatataacaatgcatgtcc 9031788  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 20149973 - 20150011
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtcc 264  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  20149973 tagaattcacctttttcaaggtgaataagtggggtgtcc 20150011  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 22182859 - 22182821
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtcc 264  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  22182859 tagaattcacctttttcaaggtgaataagtggggtgtcc 22182821  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 3243935 - 3243890
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataa 253  Q
    |||| ||||||||| ||||||||||||||||||| ||| |||||||    
T  3243935 gtcaggtagtttagtggttagaattcaccttttttaaggtgaataa 3243890  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 15126353 - 15126295
Alignment:
Q  214 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||  |||||||||||||||| |  ||| ||||||||||||||||||| ||||||||    
T  15126353 tagtttaatggttagaattcaccttat--aaggtgaataaatggggtgtccggagttcgaa 15126295  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 31595290 - 31595193
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||| ||| || ||||||| ||| |||||||  | |||||  ||||| || |||||||||||||| ||| ||  ||||||||||| ||||||    
T  31595290 gtcaagtagtctagtggatagaatttaccgttttcaaagtaaataagcggggtatctgaagttcgaatctcaacccctatatataacaatgcatgtcc 31595193  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 8176113 - 8176049
Alignment:
Q  211 aagtagtttaggggttagaattcacct-ttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||||  |||||||||||||| |||| ||| ||||||| |||||||| || ||||||||    
T  8176113 aagtagtttagtagttagaattcacctttttttaaggtgaataagtggggtgttcggagttcgaa 8176049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 8309266 - 8309186
Alignment:
Q  226 tagaattcaccttttt-caagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    |||||||||||||||| |||| ||||||  |||||||||||  ||||||| || | ||  |||||||||||||| ||||||    
T  8309266 tagaattcaccttttttcaaggtgaataggtggggtgtccggggttcgaaacttggcccatgcatataacaatgcatgtcc 8309186  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 9422950 - 9422886
Alignment:
Q  211 aagtagtttaggggttagaattcacctttt-tcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||| |||| || ||||||||||||||| ||||| ||||||| |||||||||||  |||||||    
T  9422950 aagtagcttagtggctagaattcaccttttatcaaggtgaataagtggggtgtccggtgttcgaa 9422886  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 12291274 - 12291234
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    ||||||||| || |||||||||| |||||||||||||||||    
T  12291274 ggttagaatacatctttttcaagctgaataaatggggtgtc 12291234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 17305635 - 17305580
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtcc 264  Q
    ||||||||| |||| | |||||||||| |||||||||| ||||||| ||||||||||    
T  17305635 gtcaagtagcttagtgattagaattca-ctttttcaaggtgaataagtggggtgtcc 17305580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 20858400 - 20858456
Alignment:
Q  249 aataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||| | |||||| | | ||| ||||||||||||||| ||||||    
T  20858400 aataaatggggtgtccggaattcgaaccccaacccctgcatataacaatgcatgtcc 20858456  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 22730682 - 22730774
Alignment:
Q  213 gtagtttaggggttagaattcacctt-tttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtc 304  Q
    |||| |||| || ||||||||||||| ||| ||| ||||||| |||||||||||| |||||||  ||   | ||||||||||||||| |||||    
T  22730682 gtaggttagtggctagaattcaccttattttaaggtgaataagtggggtgtccgaggttcgaacttcagtccctgcatataacaatgcatgtc 22730774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 29430297 - 29430345
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    ||||||| |||||||| ||| ||||||| |||||||||||| |||||||    
T  29430297 tagaatttacctttttaaaggtgaataagtggggtgtccgaggttcgaa 29430345  T

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Target: scaffold0119 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 1158 - 1103
Alignment:
Q  208 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 263  Q
    |||||||||||||| || |||||||||||||||||||| ||||||| |||||||||    
T  1158 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtc 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 7157 - 7085
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 298  Q
    |||||||||||||||||||||||||||| ||| ||||  || ||||||| |  |||| |||||||||||||||    
T  7157 tagaattcacctttttcaagatgaataagtggagtgtatgaggttcgaaacctgacccctgcatataacaatg 7085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 19388 - 19468
Alignment:
Q  225 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgtcc 305  Q
    ||||||||||||||||||||  |||||||||| ||||||||| |||| |  | | ||| || |||||||||||| ||||||    
T  19388 ttagaattcacctttttcaaagtgaataaatgaggtgtccgaggttcaatccccaacccctacatataacaatgcatgtcc 19468  T

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Target: scaffold1603 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1603
Description:

Target: scaffold1603; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 703 - 630
Alignment:
Q  224 gttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 297  Q
    |||||||||||||||||| ||| |||| |||| || ||||||   |||||| ||||||| | ||||||||||||    
T  703 gttagaattcaccttttttaaggtgaacaaattggatgtccgtgattcgaacctcgaccccggcatataacaat 630  T

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Target: scaffold0079 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 56394 - 56314
Alignment:
Q  223 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatgt 303  Q
    ||||| ||||||||||||||||||| |||||| ||| ||| | | ||||||| | | ||| || |||||||||||| ||||    
T  56394 ggttaaaattcacctttttcaagatcaataaacgggatgttcaaggttcgaaccccaacccctacatataacaatgcatgt 56314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 62814 - 62766
Alignment:
Q  226 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 274  Q
    |||||||||| ||||| ||||||||||| |||| ||||||| |||||||    
T  62814 tagaattcactttttttaagatgaataagtgggttgtccgatgttcgaa 62766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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