View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12871_low_10 (Length: 490)

Name: NF12871_low_10
Description: NF12871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12871_low_10
NF12871_low_10
[»] chr4 (47 HSPs)
chr4 (17-244)||(45056888-45057115)
chr4 (298-482)||(43143584-43143768)
chr4 (295-482)||(3292896-3293083)
chr4 (295-482)||(6690235-6690422)
chr4 (296-482)||(30216742-30216928)
chr4 (295-482)||(28877250-28877437)
chr4 (301-470)||(42333788-42333957)
chr4 (295-480)||(50205079-50205264)
chr4 (298-482)||(48989311-48989495)
chr4 (294-482)||(10352884-10353072)
chr4 (298-482)||(29995983-29996167)
chr4 (315-482)||(25930708-25930875)
chr4 (315-482)||(36382346-36382512)
chr4 (318-479)||(29319708-29319869)
chr4 (335-482)||(44156671-44156818)
chr4 (316-482)||(20129311-20129477)
chr4 (297-482)||(26448035-26448219)
chr4 (339-482)||(35545977-35546120)
chr4 (316-482)||(13012189-13012355)
chr4 (316-482)||(26439279-26439445)
chr4 (316-482)||(34407284-34407450)
chr4 (316-482)||(47500774-47500940)
chr4 (350-482)||(1817752-1817884)
chr4 (294-482)||(30077631-30077818)
chr4 (328-479)||(40529028-40529179)
chr4 (374-482)||(6235579-6235687)
chr4 (316-482)||(43355905-43356071)
chr4 (339-482)||(17511233-17511377)
chr4 (393-470)||(13392893-13392970)
chr4 (393-470)||(13396032-13396109)
chr4 (304-439)||(30109945-30110082)
chr4 (292-415)||(45194153-45194276)
chr4 (298-412)||(48129953-48130063)
chr4 (295-352)||(49908782-49908839)
chr4 (295-352)||(5517494-5517551)
chr4 (298-356)||(7769311-7769369)
chr4 (448-482)||(30110108-30110142)
chr4 (448-482)||(48130111-48130145)
chr4 (294-351)||(6212029-6212086)
chr4 (340-408)||(6254569-6254637)
chr4 (295-363)||(13392989-13393057)
chr4 (295-363)||(13396128-13396196)
chr4 (297-351)||(17554978-17555032)
chr4 (299-341)||(50720487-50720529)
chr4 (294-351)||(12680193-12680250)
chr4 (295-400)||(27363341-27363446)
chr4 (295-327)||(37236646-37236678)
[»] chr7 (22 HSPs)
chr7 (296-482)||(37002144-37002330)
chr7 (295-482)||(26624725-26624913)
chr7 (298-482)||(34389056-34389240)
chr7 (294-482)||(43184468-43184656)
chr7 (295-480)||(8867733-8867918)
chr7 (295-482)||(33685544-33685731)
chr7 (295-482)||(7002705-7002892)
chr7 (295-482)||(7048576-7048763)
chr7 (315-482)||(36630816-36630983)
chr7 (338-481)||(38638237-38638380)
chr7 (324-482)||(35090177-35090335)
chr7 (315-479)||(5555487-5555651)
chr7 (315-482)||(8394125-8394292)
chr7 (318-479)||(3114099-3114260)
chr7 (335-482)||(40920003-40920150)
chr7 (339-482)||(36658205-36658348)
chr7 (316-480)||(14777109-14777273)
chr7 (382-439)||(10868516-10868575)
chr7 (299-351)||(37966614-37966666)
chr7 (448-482)||(10868456-10868490)
chr7 (295-360)||(10876829-10876894)
chr7 (298-327)||(38826584-38826613)
[»] chr6 (12 HSPs)
chr6 (294-482)||(28996709-28996897)
chr6 (315-482)||(18339106-18339273)
chr6 (295-482)||(29743263-29743450)
chr6 (315-479)||(13837821-13837985)
chr6 (315-479)||(34948761-34948925)
chr6 (316-482)||(398618-398784)
chr6 (335-482)||(33229336-33229483)
chr6 (301-411)||(31028435-31028545)
chr6 (294-351)||(13646996-13647053)
chr6 (299-400)||(24697899-24698000)
chr6 (295-351)||(34385519-34385575)
chr6 (295-352)||(21149331-21149388)
[»] chr2 (24 HSPs)
chr2 (289-482)||(45418557-45418750)
chr2 (295-481)||(8147331-8147518)
chr2 (296-482)||(44084603-44084789)
chr2 (296-481)||(770975-771165)
chr2 (335-482)||(12756837-12756984)
chr2 (321-479)||(18981622-18981780)
chr2 (298-479)||(8059336-8059517)
chr2 (315-479)||(35962715-35962879)
chr2 (318-482)||(41251634-41251798)
chr2 (315-479)||(42439986-42440150)
chr2 (316-482)||(6403804-6403970)
chr2 (315-482)||(31581622-31581789)
chr2 (318-479)||(16405603-16405764)
chr2 (315-479)||(32127144-32127308)
chr2 (315-482)||(17445041-17445206)
chr2 (315-452)||(2958131-2958267)
chr2 (335-482)||(26162702-26162846)
chr2 (327-479)||(2285874-2286026)
chr2 (295-415)||(26237937-26238056)
chr2 (295-439)||(4555252-4555397)
chr2 (295-345)||(34523220-34523270)
chr2 (295-326)||(12756981-12757012)
chr2 (452-482)||(26238080-26238110)
chr2 (331-363)||(34905965-34905997)
[»] chr3 (22 HSPs)
chr3 (298-482)||(45182964-45183148)
chr3 (298-482)||(11018212-11018396)
chr3 (295-482)||(6930894-6931081)
chr3 (296-482)||(33040934-33041120)
chr3 (315-482)||(19390146-19390313)
chr3 (298-482)||(6503569-6503753)
chr3 (295-466)||(19565517-19565688)
chr3 (316-482)||(22968444-22968610)
chr3 (302-482)||(27935165-27935345)
chr3 (315-482)||(34084122-34084289)
chr3 (296-482)||(45335856-45336041)
chr3 (316-481)||(6269427-6269592)
chr3 (298-482)||(35514249-35514429)
chr3 (316-482)||(39771791-39771957)
chr3 (335-482)||(40081741-40081886)
chr3 (297-364)||(5354691-5354758)
chr3 (337-439)||(5135291-5135395)
chr3 (295-352)||(6890978-6891035)
chr3 (315-370)||(22922157-22922212)
chr3 (448-482)||(5135421-5135455)
chr3 (446-482)||(22922226-22922262)
chr3 (295-327)||(48757896-48757928)
[»] chr5 (24 HSPs)
chr5 (295-482)||(31680347-31680534)
chr5 (298-482)||(37254624-37254808)
chr5 (295-482)||(12278860-12279047)
chr5 (295-482)||(17332551-17332738)
chr5 (295-482)||(31501716-31501903)
chr5 (294-482)||(13817956-13818144)
chr5 (335-482)||(33430341-33430488)
chr5 (295-479)||(10033907-10034091)
chr5 (315-479)||(39657509-39657673)
chr5 (295-482)||(36291351-36291538)
chr5 (317-482)||(19985941-19986106)
chr5 (317-481)||(1776377-1776541)
chr5 (315-482)||(36293621-36293788)
chr5 (316-482)||(26283318-26283484)
chr5 (315-466)||(3155647-3155798)
chr5 (335-482)||(16155017-16155164)
chr5 (335-482)||(43068897-43069044)
chr5 (348-479)||(16333879-16334010)
chr5 (315-482)||(39434696-39434863)
chr5 (337-439)||(28801309-28801413)
chr5 (295-345)||(26543902-26543952)
chr5 (295-327)||(4307238-4307270)
chr5 (295-327)||(15917017-15917049)
chr5 (297-364)||(202621-202688)
[»] chr8 (15 HSPs)
chr8 (295-482)||(23402088-23402275)
chr8 (301-482)||(4403994-4404175)
chr8 (301-482)||(16788025-16788206)
chr8 (302-482)||(34136825-34137005)
chr8 (315-479)||(15838286-15838449)
chr8 (295-482)||(36408531-36408718)
chr8 (295-482)||(29728386-29728573)
chr8 (337-469)||(9877242-9877374)
chr8 (335-482)||(3648794-3648941)
chr8 (296-482)||(2729196-2729382)
chr8 (316-482)||(39914516-39914681)
chr8 (348-482)||(42230972-42231104)
chr8 (335-439)||(3435289-3435395)
chr8 (338-439)||(40470535-40470637)
chr8 (448-482)||(40470475-40470509)
[»] scaffold0502 (1 HSPs)
scaffold0502 (315-482)||(5230-5397)
[»] chr1 (17 HSPs)
chr1 (294-481)||(17445292-17445479)
chr1 (298-482)||(35907535-35907719)
chr1 (298-482)||(3828967-3829150)
chr1 (298-482)||(321377-321561)
chr1 (319-479)||(7433449-7433609)
chr1 (295-482)||(42310941-42311128)
chr1 (315-482)||(32982056-32982223)
chr1 (316-482)||(26144256-26144422)
chr1 (295-439)||(33489667-33489813)
chr1 (295-439)||(41972316-41972461)
chr1 (354-418)||(23313278-23313342)
chr1 (296-332)||(31866958-31866994)
chr1 (448-482)||(33489839-33489873)
chr1 (448-482)||(41972256-41972290)
chr1 (294-351)||(44352614-44352671)
chr1 (295-364)||(48901223-48901291)
chr1 (299-327)||(10907613-10907641)
[»] scaffold0154 (1 HSPs)
scaffold0154 (294-482)||(31459-31647)
[»] scaffold0041 (1 HSPs)
scaffold0041 (335-482)||(52945-53092)
[»] scaffold0069 (1 HSPs)
scaffold0069 (315-482)||(17842-18009)
[»] scaffold0002 (1 HSPs)
scaffold0002 (316-482)||(480457-480623)
[»] scaffold2142 (1 HSPs)
scaffold2142 (316-482)||(523-689)
[»] scaffold0769 (1 HSPs)
scaffold0769 (297-345)||(1259-1307)
[»] scaffold0012 (1 HSPs)
scaffold0012 (308-345)||(194021-194058)


Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 45056888 - 45057115
Alignment:
Q  17 agtttgatcactaactatagttaactaatgaaatcttattggagattttatggagacatattaggttgctgaagttcgccatactttgcatgaaggcaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  45056888 agtttgatcactaactatagttaactaatgaaatcttattggagatcttatggagacatattaggttgctgaagttcgccatactttgcatgaaggcaat 45056987  T
Q  117 ggtggcaacgactttcttgctaaaaagggtgttatgagtgccagtaaggttgttatcatttatggtgcctttagcgacatatcttatgttcatttagtga 216  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45056988 ggtggcagcgactttcttgctaaaaagggtgttatgagtgccagtaaggttgttatcatttatggtgcctttagcgacatatcatatgttcatttagtga 45057087  T
Q  217 gtgtcgttaatctttcgtttgttcttag 244  Q
    ||||||||||||||||||||||||||||    
T  45057088 gtgtcgttaatctttcgtttgttcttag 45057115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 298 - 482
Target Start/End: Complemental strand, 43143768 - 43143584
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    |||||||||||||| ||| ||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | ||||| |||||||||| |||||||    
T  43143768 gggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 43143669  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  43143668 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 3293083 - 3292896
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||||||||||| | |||||||||||||||  |||||||||||| |||||||||| |||||||| ||| | ||||| |||||||||| ||||    
T  3293083 caggggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacactta 3292984  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  3292983 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 6690422 - 6690235
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||| ||| | ||||| |||||||||| ||||    
T  6690422 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacactta 6690323  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| || |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  6690322 caaaaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 296 - 482
Target Start/End: Complemental strand, 30216928 - 30216742
Alignment:
Q  296 aggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttac 395  Q
    |||||||| ||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||| | |||||  ||||||||| |||||    
T  30216928 aggggcggattcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttac 30216829  T
Q  396 aaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  30216828 aaaaagaaaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 28877437 - 28877250
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||| |||  ||||||| ||||||| | ||||| ||||| |||||||||||||||||| |||| |||||||  ||||||||||||||    
T  28877437 caggggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgctta 28877338  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
     ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  28877337 taaaaagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 301 - 470
Target Start/End: Complemental strand, 42333957 - 42333788
Alignment:
Q  301 cggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaa 400  Q
    ||||||||||| || |||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||| | ||||| |||||||||| ||||||||||    
T  42333957 cggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 42333858  T
Q  401 gaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattga 470  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  42333857 gaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 295 - 480
Target Start/End: Complemental strand, 50205264 - 50205079
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||| ||||||| ||||||||||||  || ||||||||| ||||||||||||||||||  ||| | ||||| |||||||||| ||||    
T  50205264 caggggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacactta 50205165  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatc 480  Q
    |||||||||||| |||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  50205164 caaaaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 298 - 482
Target Start/End: Original strand, 48989311 - 48989495
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    |||| ||||||||||||| |||| ||||||||||   |||| ||||||| |||||||||||||||| || |||   ||||||| |||||||| |||||||    
T  48989311 gggcagtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaa 48989410  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48989411 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 10353072 - 10352884
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctt 393  Q
    |||||||||||||||||| ||||||||||| ||||||||  ||||||| |||| ||||||||||||||||||| ||| | ||||||| ||||||||  ||    
T  10353072 acaggggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacattt 10352973  T
Q  394 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| | || ||| ||||||||    
T  10352972 acaaaaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctc 10352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 298 - 482
Target Start/End: Complemental strand, 29996167 - 29995983
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    |||||||||||||||||| ||| ||||| ||||||| ||| |||||||| ||||||||| ||||||||||||| | ||||||| ||||||||  |||| |    
T  29996167 gggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacga 29996068  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| ||||||||  ||||||||||  ||||||||||||||| |||||||||||||||| ||||||||    
T  29996067 aaagaaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 482
Target Start/End: Original strand, 25930708 - 25930875
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    |||||||| |||||||||  |||||||||||  |||||||||||||||| |||||| | ||||| | ||||||||  |||||||||||||||||||||||    
T  25930708 ggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 25930807  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    || | |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  25930808 atttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 482
Target Start/End: Complemental strand, 36382512 - 36382346
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||  |||||||||||  |||||||||||||||| |||||| | ||||||| ||||||||  |||||||| ||||||||||| ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 318 - 479
Target Start/End: Complemental strand, 29319869 - 29319708
Alignment:
Q  318 gaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatc 417  Q
    |||||| ||||||||| | |||||||||| ||||||||||||||||||||||| | ||||  | ||||||||  ||||||||||||||||||| ||||||    
T  29319869 gacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatc 29319770  T
Q  418 taaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    | |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  29319769 tgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 335 - 482
Target Start/End: Original strand, 44156671 - 44156818
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    ||||||| | || ||||||||||||||||||| ||| | ||||| |||||||||| ||||||||||||||| ||||| |||||| ||||||||| |||||    
T  44156671 cgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctcacgc 44156770  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44156771 aaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 20129311 - 20129477
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | ||||| | ||||||||  ||||||||||||||||||||||||    
T  20129311 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 20129410  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||| |||||| ||||||| ||||| ||||  ||||||||||| ||||||||||||| | ||||||||    
T  20129411 tctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctc 20129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 297 - 482
Target Start/End: Original strand, 26448035 - 26448219
Alignment:
Q  297 ggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttaca 396  Q
    |||||||||||||||||||||||| ||| ||| |||| ||| |||||||| |||||||||||||||| |   || | ||||||| |||||||| ||||||    
T  26448035 ggggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttaca 26448134  T
Q  397 aaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| ||||||||||||||||| |||||||||| || |||||| || |||||||||||||||||||||||||| ||| || |||||    
T  26448135 aaaa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattggcggatttatctc 26448219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 339 - 482
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  339 ctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaat 438  Q
    ||||||||  ||||||||| ||| |||| ||| | ||||| |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  439 aagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
      ||||| |||||||||||||||||||||||| |||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 13012189 - 13012355
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||||||| |||||||||||||||||| |||| | |||||   ||||||||  ||| ||||||||||||||||||||    
T  13012189 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 13012288  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | | |||||| ||||||| ||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  13012289 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 13012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 482
Target Start/End: Complemental strand, 26439445 - 26439279
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||| ||| ||||||||||||||||||||||| | ||||| | ||||||||  ||| ||||||||||||||||||||    
T  26439445 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 26439346  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||| |||||| ||||||| ||||| |||| | ||||||||||  |||||||||||| | ||||||||    
T  26439345 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 26439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 482
Target Start/End: Complemental strand, 34407450 - 34407284
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||| ||| ||||||||||||||||||||||| | ||||| | ||||||||  ||| ||||||||||||||||||||    
T  34407450 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 34407351  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||| |||||| ||||||| ||||| |||| | ||||||||||  |||||||||||| | ||||||||    
T  34407350 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 34407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 47500774 - 47500940
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | |||||   ||||||||  |||  |||||||||||||||||||    
T  47500774 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaaaagaaaaatttgggcaa 47500873  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | | |||||| ||||||| ||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  47500874 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 47500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 350 - 482
Target Start/End: Original strand, 1817752 - 1817884
Alignment:
Q  350 atttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaa 449  Q
    ||||||||||||||||  ||||| ||||||| ||||| ||  ||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  450 ttttatttagcacactattgacgggttcatctc 482  Q
    ||||||||| |||||||||| ||| ||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 30077818 - 30077631
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctt 393  Q
    |||||||||||||||||||||| ||||| ||||||||||  | ||||| |||| ||| ||||||||||||||| ||| | ||||||  ||||||||  ||    
T  30077818 acaggggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacattt 30077720  T
Q  394 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||| |||||| |||||| | |||| |||||| |||| | ||||||||||||||||||| || ||| ||||||||    
T  30077719 acaaaaagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctc 30077631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 328 - 479
Target Start/End: Original strand, 40529028 - 40529179
Alignment:
Q  328 ggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattct 427  Q
    |||||| ||| |||||||| |||||||||||||||| |||||| ||||||    ||||||||  |||||||||||||||||||| |||| | |||||| |    
T  40529028 ggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttggacaatttgaaaattgt 40529127  T
Q  428 cacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  40529128 cacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 374 - 482
Target Start/End: Original strand, 6235579 - 6235687
Alignment:
Q  374 aaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgg 473  Q
    ||||||| ||||||||  ||||||||||||||||||||||||| | |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  6235579 aaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgg 6235678  T
Q  474 gttcatctc 482  Q
    |||||||||    
T  6235679 gttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 43355905 - 43356071
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||| ||| ||||  |||||||| ||| ||||||||||||||||||||||| | ||||| | ||||||||  ||| ||||||||||||||||||||    
T  43355905 gcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 43356004  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||| |||||| ||||||| ||||| |||| | ||||||||||  |||||||||||| | ||||||||    
T  43356005 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 43356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 339 - 482
Target Start/End: Complemental strand, 17511377 - 17511233
Alignment:
Q  339 ctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaat 438  Q
    |||||||| ||||||||||||||||||||||| | ||||| | ||||||||  ||||||||||||||||||||||||| | |||||| | ||||||||||    
T  17511377 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgttacacgcaaat 17511278  T
Q  439 aagtctcgg-aattttatttagcacactattgacgggttcatctc 482  Q
    | |||| || |||||||||||||||| ||||||  ||||||||||    
T  17511277 aggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  393 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattga 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  393 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattga 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 304 - 439
Target Start/End: Original strand, 30109945 - 30110082
Alignment:
Q  304 tttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaa 403  Q
    |||||||||||| ||||||||| ||||||  ||| |||||||| ||||||||||||||||||| ||| |  |||| | |||||||| |||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  404 aaatttgggc--aatctaaaaattctcacacgcaaata 439  Q
    |||||||| |  ||| | |||| |||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaata 30110082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 415
Target Start/End: Original strand, 45194153 - 45194276
Alignment:
Q  292 agacaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgc 391  Q
    ||||| |||| ||||||||||||| ||||||| |||| | |  ||| |||||||  |||||||||||||||| |||||| | ||||||| |||||||| |    
T  45194153 agacaagggcagtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacac 45194252  T
Q  392 ttacaaaaagaaaaatttgggcaa 415  Q
    ||||||||| ||||  ||||||||    
T  45194253 ttacaaaaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 412
Target Start/End: Original strand, 48129953 - 48130063
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    ||||||||| |||||||||||||| |||    |||  |||||||||||| ||||||||||| ||||||| ||| | |||||   |||||||| |||||||    
T  48129953 gggcggtttaaccgcccggcgacctcgg----tcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaa 48130048  T
Q  398 aaagaaaaatttggg 412  Q
    |||||||||||||||    
T  48130049 aaagaaaaatttggg 48130063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 49908839 - 49908782
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatt 352  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  49908839 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 5517551 - 5517494
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatt 352  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  5517551 caggggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 7769311 - 7769369
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttg 356  Q
    |||||||||||||| ||||||||||| ||||||||  |||||||||||| |||||||||    
T  7769311 gggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 482
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q  448 aattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||||||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctc 30110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 482
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q  448 aattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||||||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctc 48130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 6212086 - 6212029
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaat 351  Q
    |||||||||||||||||| ||||||||| ||||||||||  || ||||||||| ||||    
T  6212086 acaggggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 408
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  340 tcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatt 408  Q
    ||||||| |||||||||||||||| || ||| | ||||| |||||||||| ||| |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 13393057 - 13392989
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacatta 363  Q
    |||||||||||||||||||| |||||||||| ||||||  ||||||| |||| | | ||||||| ||||    
T  13393057 caggggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13392989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 13396196 - 13396128
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacatta 363  Q
    |||||||||||||||||||| |||||||||| ||||||  ||||||| |||| | | ||||||| ||||    
T  13396196 caggggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13396128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 17554978 - 17555032
Alignment:
Q  297 ggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaat 351  Q
    ||||||||||||||| ||| |||||||||| |||||  |||||||||||| ||||    
T  17554978 ggggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgatcgataat 17555032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 50720529 - 50720487
Alignment:
Q  299 ggcggtttcaccgcccggcgaccccgggcggtcgttcgggctc 341  Q
    ||||||||||||||||||||||| ||||||||||  |||||||    
T  50720529 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggctc 50720487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 12680250 - 12680193
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaat 351  Q
    ||||||||||||||||||||| || ||||| |||||| |  |||||||||||| ||||    
T  12680250 acaggggcggtttcaccgcccagcaaccccaggcggtggcccgggctcgatcgataat 12680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 400
Target Start/End: Original strand, 27363341 - 27363446
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||| ||||   ||||||| ||||||||||  ||||||||||||    |||||||| ||||| | ||| | ||||| | |||||||| ||||    
T  27363341 caggggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacactta 27363440  T
Q  395 caaaaa 400  Q
    ||||||    
T  27363441 caaaaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 37236678 - 37236646
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggc 327  Q
    |||| ||||||||||||||||||||||||||||    
T  37236678 caggagcggtttcaccgcccggcgaccccgggc 37236646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 4e-82; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 296 - 482
Target Start/End: Complemental strand, 37002330 - 37002144
Alignment:
Q  296 aggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttac 395  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  37002330 aggggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttac 37002231  T
Q  396 aaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  37002230 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 26624725 - 26624913
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgat-cgttaatttttgcacattagactcaatctaaaagtcaattaacacgctt 393  Q
    ||||||||||||||||||||||| ||||||||||||||   ||||||||| || ||||||||||| ||||||| ||||| |||||| ||||||||| |||    
T  26624725 caggggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacactt 26624824  T
Q  394 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26624825 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 298 - 482
Target Start/End: Complemental strand, 34389240 - 34389056
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||| | |||||  ||||||||| |||||||    
T  34389240 gggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaa 34389141  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  34389140 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 43184656 - 43184468
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctt 393  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||| | ||| ||||| || | ||||| |||||||||  |||    
T  43184656 acaggggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatactt 43184557  T
Q  394 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  43184556 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 295 - 480
Target Start/End: Complemental strand, 8867918 - 8867733
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||||| ||||| ||||| ||||||| ||  |||    
T  8867918 caggggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacattta 8867819  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatc 480  Q
    |||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  8867818 caaaaagaaaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 33685544 - 33685731
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||||||||||| |||||||||||||||| || ||| | ||||| | |||||||| ||||    
T  33685544 caggggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacactta 33685643  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||| |||||    
T  33685644 caaaaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 7002705 - 7002892
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||||   ||||||  |||||| || ||| | ||||| |||||||||| | ||    
T  7002705 caggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacata 7002804  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  7002805 caaaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 7048576 - 7048763
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||||   ||||||  |||||| || ||| | ||||| |||||||||| | ||    
T  7048576 caggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacata 7048675  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  7048676 caaaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 315 - 482
Target Start/End: Original strand, 36630816 - 36630983
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||| ||||||  |||||||||||| |||||||||||||||| |||||| | ||||||| ||||||||  |||||||||||||||||||||||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 36630915  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  36630916 atctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 338 - 481
Target Start/End: Complemental strand, 38638380 - 38638237
Alignment:
Q  338 gctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaa 437  Q
    ||||||| | ||||||||||||||||||  ||| | |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  438 taagtctcggaattttatttagcacactattgacgggttcatct 481  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 324 - 482
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q  324 gggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaa 423  Q
    |||||||||  |||||||||||  ||||||||||||||||||| ||| | ||||| |||||||||| |||||||||||||||||||||| ||||| ||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  424 ttctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 315 - 479
Target Start/End: Original strand, 5555487 - 5555651
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | ||||| | |||||| |  |||||||||||||||||||||||    
T  5555487 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaatttgggca 5555586  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||| |||||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  5555587 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 315 - 482
Target Start/End: Original strand, 8394125 - 8394292
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||||| |||||| | ||||||| ||||||||  |||||||| ||||||||||||||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 318 - 479
Target Start/End: Complemental strand, 3114260 - 3114099
Alignment:
Q  318 gaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatc 417  Q
    |||||||| ||||||  |||||||||||| ||||||||||||||||||||||| | ||||| | ||||||||  ||||||||||||||||||||||||||    
T  3114260 gaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 3114161  T
Q  418 taaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    | |||||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  3114160 tgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 40920150 - 40920003
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||||||||||| |||||||||||||||||| | || | ||||| ||||||||||  |||||||||||||||||||| |||||| |||||||||||| ||    
T  40920150 cgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgc 40920051  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40920050 aaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 339 - 482
Target Start/End: Original strand, 36658205 - 36658348
Alignment:
Q  339 ctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaat 438  Q
    |||||||| ||||||||||||||| ||| ||| | ||||| |||||||||  || ||||||| ||||||||||||||||| |||||||||||||||||||    
T  36658205 ctcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacacgcaaat 36658304  T
Q  439 aagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | ||||||||||||||||||||||||||||||||||||||||||    
T  36658305 aggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 316 - 480
Target Start/End: Complemental strand, 14777273 - 14777109
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| | |||||   ||||||||  ||||||||||||||||||||||||    
T  14777273 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaa 14777174  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatc 480  Q
    ||| |||||| ||||||| ||||| |||| |||||||||||||||||||||||||| | ||||||    
T  14777173 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 14777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 439
Target Start/End: Complemental strand, 10868575 - 10868516
Alignment:
Q  382 attaacacgcttacaaaaagaaaaatttgggc--aatctaaaaattctcacacgcaaata 439  Q
    ||||||||  ||||||||||||||||||||||  ||||| ||||||||||| ||||||||    
T  10868575 attaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaata 10868516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 37966666 - 37966614
Alignment:
Q  299 ggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaat 351  Q
    ||||||||||||||||||||||| | ||||||||| || ||||||||| ||||    
T  37966666 ggcggtttcaccgcccggcgacctcaggcggtcgtccgagctcgatcgataat 37966614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 448 - 482
Target Start/End: Complemental strand, 10868490 - 10868456
Alignment:
Q  448 aattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||| ||||||||||||||||    
T  10868490 aattttatttagcacacttttgacgggttcatctc 10868456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 10876894 - 10876829
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcaca 360  Q
    ||||||| |||||||  |||||||| |||| | |||||  |||||||||||| |||||||||||||    
T  10876894 caggggcagtttcacttcccggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 327
Target Start/End: Complemental strand, 38826613 - 38826584
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggc 327  Q
    ||||||||||||||||||||||||||||||    
T  38826613 gggcggtttcaccgcccggcgaccccgggc 38826584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 2e-78; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 28996709 - 28996897
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctt 393  Q
    |||||||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||| ||| |||||||||||||||||| |||    
T  28996709 acaggggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacactt 28996808  T
Q  394 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28996809 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 315 - 482
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||  |||||||||||  ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 29743263 - 29743450
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||| ||| ||| |||||||||| |  ||||||| |||| ||||||||||||||||||| ||| | ||||||  ||||||||  |||    
T  29743263 caggggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacattta 29743362  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    || ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| || ||| ||||||||    
T  29743363 cagaaagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctc 29743450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 315 - 479
Target Start/End: Original strand, 13837821 - 13837985
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    |||||||||||||| ||| ||||| ||||||| ||||||||| ||||||||||||| | |||||   || |||||  |||||||||||||||||||||||    
T  13837821 ggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaatttgggca 13837920  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  13837921 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 315 - 479
Target Start/End: Complemental strand, 34948925 - 34948761
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||| ||||||||  | |||||||||| ||||||||||||||||||||||| | ||||| | ||||||||  |||||||||||||||||||||||    
T  34948925 ggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 34948826  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||| |||||| |||||| ||||||  ||| | ||||||||||||||||||||||||||||||||    
T  34948825 atctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 398618 - 398784
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | |||||   ||||||||  ||| ||||||||||||||||||||    
T  398618 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 398717  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | | |||||| ||||||| ||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  398718 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 33229483 - 33229336
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||||||||||| | ||||||| ||||||||| ||| | ||||||| ||||||||  || |||||||||||||||||||||||| |||||||| |||||     
T  33229483 cgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttacacgt 33229384  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  33229383 aaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 411
Target Start/End: Complemental strand, 31028545 - 31028435
Alignment:
Q  301 cggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaa 400  Q
    |||||||||||||||||||||||| ||||| |  ||| |||||||| ||||||||||||||||||  ||| |||||||   ||||||||  |||||||||    
T  31028545 cggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaa 31028446  T
Q  401 gaaaaatttgg 411  Q
    | ||| |||||    
T  31028445 ggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 13646996 - 13647053
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaat 351  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||||||| ||||    
T  13646996 acaggggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 400
Target Start/End: Complemental strand, 24698000 - 24697899
Alignment:
Q  299 ggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaa 398  Q
    ||||||||||||||||||||||||||| |  |||  ||||||| |||| |||||||| |||||||| | ||| | ||||| | |||||||| ||||||||    
T  24698000 ggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaa 24697901  T
Q  399 aa 400  Q
    ||    
T  24697900 aa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 34385575 - 34385519
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaat 351  Q
    |||||||||||||||||||||||||||||||||||| |  | |||||||||| ||||    
T  34385575 caggggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataat 34385519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 21149388 - 21149331
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatt 352  Q
    ||||||| |||||||||||||| |||| |||||||||| ||||||| ||||| |||||    
T  21149388 caggggcagtttcaccgcccggtgacctcgggcggtcgctcgggcttgatcgataatt 21149331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 6e-72; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 289 - 482
Target Start/End: Original strand, 45418557 - 45418750
Alignment:
Q  289 tgtagacaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaaca 388  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||  ||| | ||||| |||||||||    
T  45418557 tgtatacaggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaaca 45418656  T
Q  389 cgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  45418657 cacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 295 - 481
Target Start/End: Original strand, 8147331 - 8147518
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||| |||||||||||||| |||   |||||||||||||||| ||||    
T  8147331 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacactta 8147430  T
Q  395 caaaaagaaaaatttgggcaatct-aaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatct 481  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  8147431 caaaaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 296 - 482
Target Start/End: Complemental strand, 44084789 - 44084603
Alignment:
Q  296 aggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttac 395  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| || ||||| ||||||  |||||||| |||||    
T  44084789 aggggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttac 44084690  T
Q  396 aaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  44084689 aaaaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 296 - 481
Target Start/End: Original strand, 770975 - 771165
Alignment:
Q  296 aggggcggtttcaccgcccggcgacc-----ccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacg 390  Q
    ||||||||||||||||||||||||||     |||||||||||  |||||||||||| ||| ||||||||||||||| ||| | ||||| | ||||||||     
T  770975 aggggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacaca 771074  T
Q  391 cttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatct 481  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  771075 cttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 12756984 - 12756837
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||| ||||||| |||||||||| |||||||| ||| | ||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  12756984 cgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 12756885  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12756884 aaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 321 - 479
Target Start/End: Original strand, 18981622 - 18981780
Alignment:
Q  321 cccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaa 420  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||| | ||||||| ||||| ||  ||||||||||||||||||||||||| |||    
T  18981622 cccgggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaa 18981721  T
Q  421 aaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  18981722 aaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 298 - 479
Target Start/End: Complemental strand, 8059517 - 8059336
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    |||||||||||||||||| ||||||||| || |||  | ||||| |||| |||||||||||||||||| |||| | ||||| |||||||||| |||||||    
T  8059517 gggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaa 8059418  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||||||||||||| |||| | ||||||||||||| |||||  |||||||||||||||||||||||| ||||||||||||||    
T  8059417 aaagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 315 - 479
Target Start/End: Original strand, 35962715 - 35962879
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| | |||||   ||||||||  |||||||||||||| ||||||||    
T  35962715 ggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaattttgggca 35962814  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||| |||||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  35962815 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 318 - 482
Target Start/End: Complemental strand, 41251798 - 41251634
Alignment:
Q  318 gaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatc 417  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||||||||| | ||||| | ||||||||  ||||||||||||||||||||||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  418 taaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | |||||| ||||||| ||||| |||| |||||||||||||||||||||||||| | ||||||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 41251634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 315 - 479
Target Start/End: Original strand, 42439986 - 42440150
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||||||||| || | ||||| | ||||||||  |||||||||||||||||||||||    
T  42439986 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 42440085  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||| |||||| ||||||||||||| |||| | |||||||||||||||||||||||||| |||||    
T  42440086 atctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 316 - 482
Target Start/End: Complemental strand, 6403970 - 6403804
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | ||||||  ||||||||  ||| ||||||||||||||||||||    
T  6403970 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaa 6403871  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||| |||||| ||||||| ||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  6403870 tctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 6403804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 482
Target Start/End: Complemental strand, 31581789 - 31581622
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||| ||||||||||  | ||||||| || || |||||||| ||||||||||  | ||||| | ||||||||  |||||||||||||||||||||||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggca 31581690  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  31581689 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 318 - 479
Target Start/End: Original strand, 16405603 - 16405764
Alignment:
Q  318 gaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatc 417  Q
    ||||| |||||||||  ||||||| |||| |||||||||||| |||||||||| | |||||   ||||||||  ||| |||||||||||||||| |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  418 taaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    | |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 315 - 479
Target Start/End: Complemental strand, 32127308 - 32127144
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||  |||||||||||  |||||||||||||||| |||| | | |||||   ||||||||  |||||||||||||||||| ||||    
T  32127308 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggca 32127209  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||| |||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  32127208 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 315 - 482
Target Start/End: Complemental strand, 17445206 - 17445041
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||| ||||||||||  || ||||||||| ||||||||||||  ||||||||| | ||||| | ||||||||  |||||||||||||||||||||||    
T  17445206 ggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17445109  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| ||||||| ||||| |||| |||||||||||||||||||||||||| | ||||||||    
T  17445108 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 17445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 315 - 452
Target Start/End: Complemental strand, 2958267 - 2958131
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| | ||||| | ||||||||  ||||||| ||||||||||||| |    
T  2958267 ggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatttacaaagagaaaaatttgggta 2958169  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattt 452  Q
    |||| |||||| ||||||||||||| |||| |||||||    
T  2958168 atctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 26162846 - 26162702
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||||||  ||| |||||||| ||||||| | |||| | ||||  | |||||||| ||||||||||||||||||||||||||||||||||||||| || |    
T  26162846 cgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaacac 26162747  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||| ||||||||   |||||||||||| ||||||||||||||||||    
T  26162746 aaataggtctcgga---ttatttagcacattattgacgggttcatctc 26162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 327 - 479
Target Start/End: Original strand, 2285874 - 2286026
Alignment:
Q  327 cggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattc 426  Q
    ||||| ||| || ||||||| |||||||||||||||| |  ||| | ||||||| ||||||||  |||| ||| |||||||||| ||||||| ||||||     
T  2285874 cggtcattcaggttcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattg 2285973  T
Q  427 tcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    ||||||||||||| || | ||||||||||||||||||||||||||| ||||||    
T  2285974 tcacacgcaaataggttttggaattttatttagcacactattgacgtgttcat 2286026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 295 - 415
Target Start/End: Original strand, 26237937 - 26238056
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||| ||||| || ||||||||||||||||||||||  |||||||||||| || |||||||| ||||||  ||| | ||||||| |||||||| ||||    
T  26237937 caggggtggttttacagcccggcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacactta 26238035  T
Q  395 caaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||||||    
T  26238036 caaaaagaaaaatttgggcaa 26238056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 439
Target Start/End: Complemental strand, 4555397 - 4555252
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||| |||| ||||||||||||| | |||||||||| | || |||||||| |||||||||||||| | || ||| | |||||    ||||||| ||||    
T  4555397 caggggtggttccaccgcccggcgatctcgggcggtcgct-ggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacactta 4555299  T
Q  395 caaaaagaaaaatttgggc--aatctaaaaattctcacacgcaaata 439  Q
    ||||||||||| |||||||  ||||| |||||||||||||| |||||    
T  4555298 caaaaagaaaattttgggcaaaatctgaaaattctcacacgtaaata 4555252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 34523220 - 34523270
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatc 345  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  34523220 caggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 34523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 326
Target Start/End: Complemental strand, 12757012 - 12756981
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccggg 326  Q
    ||||||||||||||||||||||||||||||||    
T  12757012 caggggcggtttcaccgcccggcgaccccggg 12756981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 452 - 482
Target Start/End: Original strand, 26238080 - 26238110
Alignment:
Q  452 ttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||||||||||    
T  26238080 ttatttagcacactattgacgggttcatctc 26238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 363
Target Start/End: Original strand, 34905965 - 34905997
Alignment:
Q  331 cgttcgggctcgatcgttaatttttgcacatta 363  Q
    |||||||||||||||| ||||||||||||||||    
T  34905965 cgttcgggctcgatcgataatttttgcacatta 34905997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 2e-71; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 298 - 482
Target Start/End: Original strand, 45182964 - 45183148
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||| ||| | ||||| |||||||||| |||||||    
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 45183063  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45183064 aaagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 298 - 482
Target Start/End: Complemental strand, 11018396 - 11018212
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    |||||||||||||| |||||||| |||||||||||  | |||||||||| ||||||||||||||||||||||| | ||||| |||||||||| |||||||    
T  11018396 gggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 11018297  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  11018296 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 6931081 - 6930894
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||| |||||||||| |||||||  ||| | ||||| ||||||||||  |||    
T  6931081 caggggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacattta 6930982  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  6930981 caaaaagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 296 - 482
Target Start/End: Original strand, 33040934 - 33041120
Alignment:
Q  296 aggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttac 395  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| ||||||| ||| | |||||  ||||||||| |||||    
T  33040934 aggggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttac 33041033  T
Q  396 aaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||  |||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33041034 aaaaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 315 - 482
Target Start/End: Original strand, 19390146 - 19390313
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| ||||||| ||||| |||| |||||||||||||||||||||||||| | ||||||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 19390313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 298 - 482
Target Start/End: Complemental strand, 6503753 - 6503569
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||| | ||||||||| ||||||||||| | ||||| |||||| ||| |||||||    
T  6503753 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttacaa 6503654  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||  ||||||| |||||||||||| ||||||| |||||||| ||||||||||||||| ||||| |||||||||||    
T  6503653 aaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 295 - 466
Target Start/End: Complemental strand, 19565688 - 19565517
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||||||||||| ||||||||||||  |||| || |||| ||||||||||||||||||| ||| | |||| || ||||||||  |||    
T  19565688 caggggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacattta 19565589  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacacta 466  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  19565588 caaaaagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 316 - 482
Target Start/End: Complemental strand, 22968610 - 22968444
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||| || | ||||| | ||||||||  ||||||||||||||||||||||||    
T  22968610 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 22968511  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||| ||||||| ||||| |||| | |||||||||||||||||||||||| | ||||||||    
T  22968510 tctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 22968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 302 - 482
Target Start/End: Original strand, 27935165 - 27935345
Alignment:
Q  302 ggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaag 401  Q
    |||||||||||| ||| |||| |||| ||||  |||||||||||| |||||||||||||||| || ||| | |||||   |||||||| |||||||||||    
T  27935165 ggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaag 27935264  T
Q  402 aaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  27935265 aaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 482
Target Start/End: Complemental strand, 34084289 - 34084122
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||  ||| |||||||| |||||||||||||||| | |||| | ||||||| ||||||||  |||||||||||||||||||||||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    || | |||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 296 - 482
Target Start/End: Original strand, 45335856 - 45336041
Alignment:
Q  296 aggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttac 395  Q
    |||||||||||||||||||||||||| ||||||||||  ||| ||| |||| |||||||| |||||||||| ||| | |||||||| |||||||  ||||    
T  45335856 aggggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttac 45335954  T
Q  396 aaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||| |||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||| || ||| ||||||||    
T  45335955 aaaaagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctc 45336041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 316 - 481
Target Start/End: Complemental strand, 6269592 - 6269427
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||| | ||||| | ||||||||  ||||||||||||||||||||||||    
T  6269592 gcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 6269493  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatct 481  Q
    ||| |||||| ||||||| ||||| |||| |||||||||||||||||||||||||| | |||||||    
T  6269492 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 298 - 482
Target Start/End: Original strand, 35514249 - 35514429
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||| | ||||  ||| | ||||||| ||||||||    ||||    
T  35514249 gggcagtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacac----acaa 35514344  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||| |||| | ||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  35514345 aaagaaaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 39771791 - 39771957
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||| ||| ||||||||||||||||||||||| | ||||| | ||||||||  ||| ||||||||||||||||||||    
T  39771791 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 39771890  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||| |||||| ||||||| ||||| |||| | ||||||||||  |||||||||||| | ||||||||    
T  39771891 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 39771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 40081886 - 40081741
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||||||||||| ||||||||| ||||||||||||| | |||  ||| |||||||  ||||||||||||||||||||||||| | |||||| ||||||||    
T  40081886 cgggctcgatcgataatttttgaacattagactcaaccaaaagctca-ttaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgc 40081788  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||  ||| || ||||| ||||||||||||||||||||||||||||    
T  40081787 aaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 5354691 - 5354758
Alignment:
Q  297 ggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattag 364  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||| ||||||||  ||||||||    
T  5354691 ggggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattag 5354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 439
Target Start/End: Original strand, 5135291 - 5135395
Alignment:
Q  337 ggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggc--aatctaaaaattctcacacgc 434  Q
    |||||||||| | ||||||| ||||||||| ||| |||||||   |||||||| ||||||||||||||||||||| |  ||||  ||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  435 aaata 439  Q
    |||||    
T  5135391 aaata 5135395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 6890978 - 6891035
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatt 352  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||||||| |||||    
T  6890978 caggggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 22922157 - 22922212
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaa 370  Q
    ||||| |||||||||||| ||||||||||||| | |||||||||||||| ||||||    
T  22922157 ggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaa 22922212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 482
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q  448 aattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||||||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctc 5135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 482
Target Start/End: Original strand, 22922226 - 22922262
Alignment:
Q  446 ggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22922226 ggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 48757928 - 48757896
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggc 327  Q
    ||||||||||||||||||||| |||||||||||    
T  48757928 caggggcggtttcaccgcccgtcgaccccgggc 48757896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 1e-70; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 31680347 - 31680534
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||| | |||||||| ||| | ||||| |||||||||| ||||    
T  31680347 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacactta 31680446  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31680447 caaaaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 298 - 482
Target Start/End: Original strand, 37254624 - 37254808
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    ||||||||||||||| |||||||||| ||||||||  | |||||||||| ||||||||||||||||||| ||| | |||||||||||||||| |||||||    
T  37254624 gggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaa 37254723  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  37254724 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 12279047 - 12278860
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||||||||||| ||||||||||||  ||| |||||||| ||||||||||||||||||| ||| | ||| | |||||||||| ||||    
T  12279047 caggggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacactta 12278948  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  12278947 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 17332738 - 17332551
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||||||| ||||||| ||| | ||||| |||||||||| ||||    
T  17332738 caggggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacactta 17332639  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  17332638 caaaaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 31501903 - 31501716
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||||||||||||||||||||||||| | |  |||||||||||| ||||||||||||||||||| ||| | ||||| |||||||||| ||||    
T  31501903 caggggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacactta 31501804  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||||||||||||||||||| | |||||||||    
T  31501803 caaaaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc 31501716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 13817956 - 13818144
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctt 393  Q
    ||||||||||||  ||||   |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||| | ||||||||  ||    
T  13817956 acaggggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 13818055  T
Q  394 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||    
T  13818056 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 335 - 482
Target Start/End: Original strand, 33430341 - 33430488
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||||||||||| |||||||||| |||||||| ||| | ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  33430341 cgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 33430440  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33430441 aaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 295 - 479
Target Start/End: Original strand, 10033907 - 10034091
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||  ||||   ||||||||||| || |||  |||||||||||| ||||||||||||||||||||||| | ||||| | ||||||||  |||    
T  10033907 caggggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 10034006  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  10034007 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 315 - 479
Target Start/End: Complemental strand, 39657673 - 39657509
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| | |||||   ||||||||  |||||||||||||||||||||||    
T  39657673 ggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 39657574  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  39657573 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 36291351 - 36291538
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||||||| |||| |||||||||||| |||| ||||||  ||||||||||||||||||   || ||||||||  ||||||||  |||    
T  36291351 caggggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacattta 36291450  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| |||||| | |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  36291451 caaaaagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 317 - 482
Target Start/End: Original strand, 19985941 - 19986106
Alignment:
Q  317 cgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaat 416  Q
    ||||| ||||||||||| || ||||||||| |||||||||||||||||| |||| | ||||||| |||| |||  ||||||||||||||||||||| |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  417 ctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||| ||||||||||||| |||| | ||||||||||| |||||||||||| ||||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 317 - 481
Target Start/End: Complemental strand, 1776541 - 1776377
Alignment:
Q  317 cgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaat 416  Q
    ||||||||||||||||  |||||||||||| ||||||||| |||||| | |||| | ||||||| ||||||||  |||||||||||||||||||||||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  417 ctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatct 481  Q
     | |||||| ||||||||||||| |||| |||||||||||||||||||||| ||| |||||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 482
Target Start/End: Complemental strand, 36293788 - 36293621
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    |||||||||| |||||||| ||| |||||||| ||||||||| ||||||||||||| | ||||| | ||||||||  |||||||||||||||||||||||    
T  36293788 ggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 36293689  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| ||||||| ||||| |||| ||||||||||||||||||||||| || | ||||||||    
T  36293688 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctc 36293621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 316 - 482
Target Start/End: Complemental strand, 26283484 - 26283318
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||| ||||||||||  |||||||||||| ||||||||||||||||||||||| | ||||||  ||||||||  ||| ||||||||||||||||||||    
T  26283484 gcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaa 26283385  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||| |||||| ||||||| ||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  26283384 tctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 466
Target Start/End: Complemental strand, 3155798 - 3155647
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||| |||||||||||| ||||||||||||  ||||||||||||||| ||||||| ||||||||| ||||||||  ||| |||||||||||||||| ||    
T  3155798 ggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggaca 3155699  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacacta 466  Q
    |||| |||||| |||||||||||||  ||| |||||||||||||||||||||    
T  3155698 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 335 - 482
Target Start/End: Original strand, 16155017 - 16155164
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||||||||||| ||||||||||||||||||||||| | ||||| | ||||||||  ||| |||||||||||||| |||||||| |||||| ||||||||    
T  16155017 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacacgc 16155116  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||| |||| |||||||||||||||||||||||||| | ||||||||    
T  16155117 aaataggtcttggaattttatttagcacactattgacagattcatctc 16155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 335 - 482
Target Start/End: Original strand, 43068897 - 43069044
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||||||||||  |||||||| |||||||||| ||| | ||||||| ||||||||  ||||||||||||||||||||||||||| |||||||| ||| |     
T  43068897 cgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatgt 43068996  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  43068997 aaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 348 - 479
Target Start/End: Complemental strand, 16334010 - 16333879
Alignment:
Q  348 taatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcgg 447  Q
    |||||||||||||||||| |||| | ||||| | ||||||||  ||||||||||||||||||||||||||| |||||| ||||||||||||| |||| ||    
T  16334010 taatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgg 16333911  T
Q  448 aattttatttagcacactattgacgggttcat 479  Q
    |||||||||||||||||||||||||| |||||    
T  16333910 aattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 482
Target Start/End: Original strand, 39434696 - 39434863
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    |||||||| |||||||||  |||||||||||| |||||||| |||||||||||||| | ||||| | ||||||||  |||||||| ||||||||||||||    
T  39434696 ggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatgaaaaatttgggca 39434795  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| ||||| | ||||| ||||  ||||||||||||||||||||||||| | ||||||||    
T  39434796 atctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctc 39434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 439
Target Start/End: Original strand, 28801309 - 28801413
Alignment:
Q  337 ggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttggg--caatctaaaaattctcacacgc 434  Q
    |||||||||| ||||||||||||||||||  ||| | ||||| | |||||||| ||||||||||||||||||||||   ||| | |||||||||||||||    
T  28801309 ggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaattctcacacgc 28801408  T
Q  435 aaata 439  Q
    |||||    
T  28801409 aaata 28801413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 26543952 - 26543902
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatc 345  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  26543952 caggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 26543902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 4307270 - 4307238
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggc 327  Q
    |||||||||||||||||||||||||||||||||    
T  4307270 caggggcggtttcaccgcccggcgaccccgggc 4307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 15917017 - 15917049
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggc 327  Q
    |||||||||||||||||||||||||||||||||    
T  15917017 caggggcggtttcaccgcccggcgaccccgggc 15917049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 202621 - 202688
Alignment:
Q  297 ggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattag 364  Q
    ||||||||||||||||||| ||||||  || |||||  |||||||||||| |||||| || |||||||    
T  202621 ggggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataatttgtgtacattag 202688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 6e-66; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 23402088 - 23402275
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||| |||||| ||||||| ||| | ||||| |||||||||| ||||    
T  23402088 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacactta 23402187  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||| |||||||||||| ||||||||||    
T  23402188 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 301 - 482
Target Start/End: Original strand, 4403994 - 4404175
Alignment:
Q  301 cggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaa 400  Q
    ||||||||| | ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||| | ||||| |||||||||  ||||||||||    
T  4403994 cggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaa 4404093  T
Q  401 gaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  4404094 gaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 301 - 482
Target Start/End: Complemental strand, 16788206 - 16788025
Alignment:
Q  301 cggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaa 400  Q
    ||||||||  ||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||| | ||||| |||||||||| ||||||||||    
T  16788206 cggtttcattgcccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 16788107  T
Q  401 gaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  16788106 gaaaaatttgggcaatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 302 - 482
Target Start/End: Complemental strand, 34137005 - 34136825
Alignment:
Q  302 ggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaag 401  Q
    |||||||||| | |||||||||| |||||||  |||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  34137005 ggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaag 34136906  T
Q  402 aaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||    
T  34136905 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 315 - 479
Target Start/End: Original strand, 15838286 - 15838449
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    |||||||||||||||||   |||||||||| | |||||||||||||||| |||||| | ||||||| ||||||||  |||||||| ||||||||||||||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggca 15838384  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    |||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  15838385 atctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 36408531 - 36408718
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||| |||||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||||  ||| | ||||||| ||||||||  |||    
T  36408531 caggggtggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacattta 36408630  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||| ||| |||||| | |||||||| |||||| |||| ||||| |||||||||||| |||||||||| ||| ||||||||    
T  36408631 caaaaagaaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 29728573 - 29728386
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||  ||||   ||||||||||| ||||||  || ||||||||| ||| ||||||||||||||||||| | |||||   ||||||||  |||    
T  29728573 caggggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacattta 29728474  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| |||||| | ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  29728473 caaaaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 337 - 469
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  337 ggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaa 436  Q
    |||||||| | |||||||||||||||||||  || | |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  437 ataagtctcggaattttatttagcacactattg 469  Q
    ||| |||||| ||||||||||||||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 3648941 - 3648794
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||||||||||| |||||||| |||||||||||||| | ||||| | ||||||||  |||||||||||||| |||||||||||| |||||| ||||||||    
T  3648941 cgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtcacacgc 3648842  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    || || || | |||||||||||||||||||||||||||||||||||||    
T  3648841 aagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 296 - 482
Target Start/End: Complemental strand, 2729382 - 2729196
Alignment:
Q  296 aggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttac 395  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||| ||||||| |  ||||| ||||| | |||||||| ||||     
T  2729382 aggggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttat 2729283  T
Q  396 aaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||  ||| |||||| | |||| ||||| ||||||||| |||||  ||||||||||||||||||||||| || ||||||||    
T  2729282 aaaaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctc 2729196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 39914516 - 39914681
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | |||||   ||||||||  ||| ||||| ||||||||||||||    
T  39914516 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaa 39914614  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | | |||||| ||||| | ||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  39914615 tttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctc 39914681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 348 - 482
Target Start/End: Original strand, 42230972 - 42231104
Alignment:
Q  348 taatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcgg 447  Q
    |||||||||||||||| |  |||   ||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| | ||||||| ||||| |    
T  42230972 taatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctcag 42231069  T
Q  448 aattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||||| ||||||||    
T  42231070 aattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 3435289 - 3435395
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggc--aatctaaaaattctcacac 432  Q
    |||||| ||||| ||||||||||||||||||| ||| | ||||  | |||||||| |||||||||||||||||||||||  ||||| |||||||||| ||    
T  3435289 cgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctcaaac 3435388  T
Q  433 gcaaata 439  Q
    |||||||    
T  3435389 gcaaata 3435395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 40470637 - 40470535
Alignment:
Q  338 gctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggc--aatctaaaaattctcacacgca 435  Q
    ||||||||| ||||||||||||||||||| |||   ||||||| |||||||| |||| ||||| ||||| ||||||  |||||||||| || |||||| |    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaa-aaaaaattgggcaaaatctaaaaactcgcacacgta 40470539  T
Q  436 aata 439  Q
    ||||    
T  40470538 aata 40470535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 482
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q  448 aattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||||||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctc 40470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 315 - 482
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||  |||||||||||  ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 8e-59; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 294 - 481
Target Start/End: Original strand, 17445292 - 17445479
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctt 393  Q
    |||||||||||||||  |||||||||||||  |||||||  |||||| ||||  ||||||||| ||||||||  ||| | |||||||||||||||| |||    
T  17445292 acaggggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacactt 17445391  T
Q  394 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatct 481  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  17445392 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 298 - 482
Target Start/End: Original strand, 35907535 - 35907719
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    |||||||||||||||||||||||| ||||||||||  |||||| ||||| ||||||||||||||||||| ||| | ||||| ||||||  || |||||||    
T  35907535 gggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaa 35907634  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  35907635 aaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 298 - 482
Target Start/End: Original strand, 3828967 - 3829150
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    ||||||||||| | |||||| ||||||| |||||| ||||| ||||||| |||||||||||||||| || ||| | ||||||  |||||||| |||||||    
T  3828967 gggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaa 3829066  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| |||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  3829067 aaagaaaaatttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 298 - 482
Target Start/End: Complemental strand, 321561 - 321377
Alignment:
Q  298 gggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaa 397  Q
    ||||||||||||| ||||||||   ||||||||||| |||||||||||| |||||||||  |||||||  ||| | ||||||| ||||||||  ||||||    
T  321561 gggcggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaa 321462  T
Q  398 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  321461 aaagaaaaatttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 319 - 479
Target Start/End: Original strand, 7433449 - 7433609
Alignment:
Q  319 accccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatct 418  Q
    ||||||||||||||  || ||||||||  ||||||||||||||||||||||| | ||||| | ||||||||  |||||||||||||| ||||||||||||    
T  7433449 accccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatct 7433548  T
Q  419 aaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcat 479  Q
    ||||||| |||||| |||||| |||| | ||||||||||||||||||||||||||||||||    
T  7433549 aaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 42311128 - 42310941
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||  ||||   ||||||||| | || |||  |||||||||||| ||||||||||||||||||||||| | ||||| |  |||||||  |||    
T  42311128 caggggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacattta 42311029  T
Q  395 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||||||||| || |||||||||||||||||||    
T  42311028 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 482
Target Start/End: Complemental strand, 32982223 - 32982056
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    ||||||||||||||||||  ||||| |||||| ||||||||||||||||||| ||| ||||||| | |||||||   |||||||||||||||||||| ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| |||||| |||||| |||| ||||||||||||||||| |||||||| | ||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctc 32982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 26144256 - 26144422
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | |||||   ||||||||  ||| ||||||||||||||||||||    
T  26144256 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 26144355  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | | |||||| ||||||| ||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  26144356 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 295 - 439
Target Start/End: Original strand, 33489667 - 33489813
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    |||||||||||||||| |||||||||||||| |||||||||||| | | ||| ||||||||| ||||||||||||| ||||||| | |||||||| ||||    
T  33489667 caggggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacactta 33489766  T
Q  395 caaaaagaaaaatttgggc--aatctaaaaattctcacacgcaaata 439  Q
    | |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  33489767 ctaaaagaaaaatttgagcaaaatctgaaaattctcacacgcaaata 33489813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 439
Target Start/End: Complemental strand, 41972461 - 41972316
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctta 394  Q
    ||||||||||| ||||| || |||||||||||||||||  | |||||||||| ||||||||||||||||||  ||| ||||||| | |||||||| ||||    
T  41972461 caggggcggttccaccgtccagcgaccccgggcggtcgc-ctggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacactta 41972363  T
Q  395 caaaaagaaaaatttgg--gcaatctaaaaattctcacacgcaaata 439  Q
    |||||||||||||||||    ||||| ||||||||||||||||||||    
T  41972362 caaaaagaaaaatttggaaaaaatctgaaaattctcacacgcaaata 41972316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 23313278 - 23313342
Alignment:
Q  354 ttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatct 418  Q
    |||||||||||||||||  |||||||  ||||||||  |||||||||||||||||||||||||||    
T  23313278 ttgcacattagactcaacataaaagttcattaacacatttacaaaaagaaaaatttgggcaatct 23313342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 31866958 - 31866994
Alignment:
Q  296 aggggcggtttcaccgcccggcgaccccgggcggtcg 332  Q
    |||||||||||||||||||||||||||||||||||||    
T  31866958 aggggcggtttcaccgcccggcgaccccgggcggtcg 31866994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 482
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q  448 aattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||||||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctc 33489873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 482
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q  448 aattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||||||||||||||||||||    
T  41972290 aattttatttagcacactattgacgggttcatctc 41972256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 44352671 - 44352614
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaat 351  Q
    |||||||||||||||||  |||||||||||||| |||||  |||||||||||| ||||    
T  44352671 acaggggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 48901291 - 48901223
Alignment:
Q  295 caggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattag 364  Q
    ||||||||||| ||||||||||| || ||||||||| |  |||| ||||||| |||||| ||||||||||    
T  48901291 caggggcggttccaccgcccggcaactccgggcggt-ggccggggtcgatcgataatttatgcacattag 48901223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 327
Target Start/End: Original strand, 10907613 - 10907641
Alignment:
Q  299 ggcggtttcaccgcccggcgaccccgggc 327  Q
    |||||||||||||||||||||||||||||    
T  10907613 ggcggtttcaccgcccggcgaccccgggc 10907641  T

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Target: scaffold0154 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 31459 - 31647
Alignment:
Q  294 acaggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgctt 393  Q
    ||||||||||||||| |||||||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| ||| | ||||| | |||||||| |||    
T  31459 acaggggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacactt 31558  T
Q  394 acaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||| |||| | |||||||||| ||||||||||||| ||||||||||    
T  31559 acaaaaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 335 - 482
Target Start/End: Original strand, 52945 - 53092
Alignment:
Q  335 cgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 434  Q
    |||||||||||| |||||||||||||||||| | || | ||||| ||||||||||  |||||||||||||||||||| |||||| |||||||||||| ||    
T  52945 cgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgc 53044  T
Q  435 aaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  53045 aaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 482
Target Start/End: Original strand, 17842 - 18009
Alignment:
Q  315 ggcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggca 414  Q
    |||||||||| ||| |||| |||||||||||| ||||||||||||||||||||||| | ||||| | ||||||||  |||||||||||||||||||||||    
T  17842 ggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17941  T
Q  415 atctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    |||| |||||| ||||| | ||||| |||| | |||||||||||||||||||||||| | ||||||||    
T  17942 atctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 18009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 316 - 482
Target Start/End: Complemental strand, 480623 - 480457
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | |||||   ||||||||  ||| ||||||||||||||||||||    
T  480623 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 480524  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | | |||||| ||||||| ||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  480523 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 480457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 523 - 689
Alignment:
Q  316 gcgaccccgggcggtcgttcgggctcgatcgttaatttttgcacattagactcaatctaaaagtcaattaacacgcttacaaaaagaaaaatttgggcaa 415  Q
    |||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| | |||||   ||||||||  ||| ||||||||||||||||||||    
T  523 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 622  T
Q  416 tctaaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 482  Q
    | | |||||| ||||||| ||||| |||| |||||||||||| ||||||||||||| | ||||||||    
T  623 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 1259 - 1307
Alignment:
Q  297 ggggcggtttcaccgcccggcgaccccgggcggtcgttcgggctcgatc 345  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||    
T  1259 ggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 1307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 194021 - 194058
Alignment:
Q  308 accgcccggcgaccccgggcggtcgttcgggctcgatc 345  Q
    |||||||||||||||||||||||||  |||||||||||    
T  194021 accgcccggcgaccccgggcggtcgcccgggctcgatc 194058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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