View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12872_low_14 (Length: 279)
Name: NF12872_low_14
Description: NF12872
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12872_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 21 - 274
Target Start/End: Original strand, 26944623 - 26944881
Alignment:
| Q |
21 |
tttcttacaatgaagatacaatgctattacttatgtttttcttacatggaaatgttaatt-----ttagtagaaaatattgaactatggacctcctttaa |
115 |
Q |
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| T |
26944623 |
tttcttacaatgaagatacaatgctattacttatgtttttcttacatgcaaatgttaattatattttagtagaaaatattgaactatggacctcctttaa |
26944722 |
T |
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| Q |
116 |
ttaatttgaaatgggtaattggcagatgaacaaagcctcaattattgtggacgcctccaaatacatagaagagttgaagcaaaaagtggagggaatgaac |
215 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26944723 |
ttaatttcaaatgggtaattggcagatgaacaaagcctcaattattgtggacgcctccaaatacataaaagagttgaagcaaaaagtggagggaatgaac |
26944822 |
T |
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| Q |
216 |
tctgagttaggaaacgttgagtcctcaacttctcaaatggatgagcaacctatgctact |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26944823 |
tctgagttaggaaacgttgagtcctcaacttctcaaatggatgagcaacctatggtact |
26944881 |
T |
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