View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12877_high_9 (Length: 535)

Name: NF12877_high_9
Description: NF12877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12877_high_9
NF12877_high_9
[»] scaffold0642 (2 HSPs)
scaffold0642 (311-525)||(3932-4146)
scaffold0642 (247-300)||(3810-3863)
[»] scaffold0345 (2 HSPs)
scaffold0345 (311-525)||(13844-14058)
scaffold0345 (247-300)||(13722-13775)
[»] scaffold0105 (2 HSPs)
scaffold0105 (311-525)||(24923-25137)
scaffold0105 (247-300)||(25206-25259)
[»] chr4 (30 HSPs)
chr4 (311-525)||(15707187-15707402)
chr4 (1-206)||(17932007-17932213)
chr4 (1-204)||(17931288-17931491)
chr4 (114-206)||(9268021-9268113)
chr4 (114-205)||(49028509-49028600)
chr4 (1-202)||(53892253-53892456)
chr4 (114-203)||(52677553-52677642)
chr4 (114-206)||(3990921-3991013)
chr4 (13-203)||(53898227-53898419)
chr4 (114-215)||(10468726-10468827)
chr4 (247-300)||(15707065-15707118)
chr4 (84-204)||(4437680-4437800)
chr4 (114-202)||(12585404-12585492)
chr4 (131-203)||(45667232-45667304)
chr4 (133-204)||(9450923-9450994)
chr4 (131-204)||(10286410-10286483)
chr4 (139-204)||(28451547-28451612)
chr4 (114-201)||(25225793-25225880)
chr4 (133-204)||(28450750-28450821)
chr4 (144-206)||(12315853-12315915)
chr4 (133-202)||(4439038-4439107)
chr4 (92-157)||(12316059-12316124)
chr4 (133-204)||(9449715-9449786)
chr4 (120-186)||(49028281-49028347)
chr4 (139-204)||(12585158-12585223)
chr4 (122-202)||(16067578-16067656)
chr4 (120-200)||(52677804-52677884)
chr4 (114-201)||(10202681-10202768)
chr4 (120-206)||(10468478-10468564)
chr4 (154-206)||(49287428-49287480)
[»] chr8 (11 HSPs)
chr8 (313-525)||(44495336-44495548)
chr8 (247-300)||(44495212-44495265)
chr8 (139-204)||(10536000-10536065)
chr8 (114-203)||(18203302-18203391)
chr8 (133-204)||(10536792-10536863)
chr8 (120-202)||(30905978-30906060)
chr8 (139-203)||(32539456-32539520)
chr8 (247-297)||(41434876-41434925)
chr8 (131-206)||(18202771-18202846)
chr8 (117-203)||(30905397-30905483)
chr8 (252-297)||(42934871-42934915)
[»] scaffold1526 (1 HSPs)
scaffold1526 (425-525)||(1260-1360)
[»] chr2 (16 HSPs)
chr2 (311-422)||(3377244-3377356)
chr2 (425-525)||(3378173-3378273)
chr2 (114-204)||(38695134-38695224)
chr2 (92-212)||(4410599-4410719)
chr2 (114-212)||(18166625-18166723)
chr2 (247-300)||(3377122-3377175)
chr2 (133-204)||(4734217-4734288)
chr2 (133-204)||(14159206-14159277)
chr2 (139-206)||(4733302-4733369)
chr2 (133-204)||(14160421-14160492)
chr2 (131-204)||(42963031-42963104)
chr2 (114-200)||(4409164-4409250)
chr2 (114-204)||(42962768-42962858)
chr2 (139-204)||(18171351-18171416)
chr2 (120-186)||(38694906-38694972)
chr2 (247-280)||(3081203-3081236)
[»] chr1 (7 HSPs)
chr1 (91-206)||(9114817-9114932)
chr1 (139-213)||(14904602-14904676)
chr1 (133-206)||(14903804-14903877)
chr1 (133-204)||(17690936-17691007)
chr1 (139-204)||(9116068-9116132)
chr1 (134-204)||(37499438-37499508)
chr1 (132-202)||(17689738-17689807)
[»] chr5 (12 HSPs)
chr5 (114-204)||(23322344-23322434)
chr5 (84-204)||(34634068-34634188)
chr5 (114-204)||(42792948-42793038)
chr5 (133-204)||(9379930-9380001)
chr5 (133-203)||(9380718-9380788)
chr5 (120-206)||(43183228-43183314)
chr5 (120-204)||(23322098-23322182)
chr5 (114-185)||(1501077-1501148)
chr5 (114-204)||(5841123-5841213)
chr5 (131-201)||(5840880-5840950)
chr5 (139-205)||(20244522-20244588)
chr5 (143-204)||(15933602-15933663)
[»] chr3 (21 HSPs)
chr3 (114-204)||(27864799-27864889)
chr3 (114-204)||(24107151-24107241)
chr3 (133-204)||(31596752-31596823)
chr3 (121-206)||(38758860-38758945)
chr3 (120-204)||(3171489-3171573)
chr3 (116-204)||(27865046-27865134)
chr3 (140-204)||(46685537-46685601)
chr3 (134-204)||(16907930-16908000)
chr3 (143-216)||(18025868-18025941)
chr3 (116-204)||(19860491-19860579)
chr3 (114-204)||(46684098-46684188)
chr3 (131-204)||(38758608-38758681)
chr3 (122-204)||(24107405-24107487)
chr3 (155-206)||(11422377-11422428)
chr3 (131-181)||(14812450-14812500)
chr3 (121-186)||(21792235-21792300)
chr3 (114-201)||(54446261-54446349)
chr3 (133-180)||(18026116-18026163)
chr3 (114-181)||(19860736-19860802)
chr3 (114-184)||(21792362-21792433)
chr3 (114-204)||(3171735-3171822)
[»] scaffold0069 (1 HSPs)
scaffold0069 (114-202)||(19897-19985)
[»] chr7 (10 HSPs)
chr7 (243-300)||(16000047-16000104)
chr7 (114-204)||(4265222-4265312)
chr7 (131-205)||(8905639-8905713)
chr7 (143-201)||(8342673-8342731)
chr7 (133-202)||(8328197-8328266)
chr7 (243-300)||(14586231-14586288)
chr7 (139-204)||(18471777-18471842)
chr7 (134-185)||(25749396-25749447)
chr7 (133-203)||(8329046-8329115)
chr7 (134-204)||(18470139-18470209)
[»] chr6 (6 HSPs)
chr6 (114-204)||(3659198-3659287)
chr6 (114-204)||(5367661-5367750)
chr6 (132-204)||(8286788-8286860)
chr6 (131-204)||(3658952-3659025)
chr6 (152-204)||(8287449-8287501)
chr6 (247-280)||(27765318-27765351)
[»] scaffold0076 (1 HSPs)
scaffold0076 (247-300)||(1876-1929)
[»] scaffold0008 (2 HSPs)
scaffold0008 (114-201)||(266866-266953)
scaffold0008 (120-183)||(266642-266705)
[»] scaffold0016 (1 HSPs)
scaffold0016 (481-525)||(53871-53915)
[»] scaffold0006 (1 HSPs)
scaffold0006 (92-183)||(93652-93743)


Alignment Details
Target: scaffold0642 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 311 - 525
Target Start/End: Original strand, 3932 - 4146
Alignment:
Q  311 ccgttgttacgtcacgtttcatatactttcatcaatatcatatcctttcaattacctctttgaactacaaacaatttt-aaactaaccaatcaacatcca 409  Q
    |||||||||| ||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3932 ccgttgttacctcacgtt-catatacttccattaatatcatatcctttcgattacctctttgaactacaaacaattttcaaactaaccaatcaacatcca 4030  T
Q  410 tcgctaacactatatatctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031 tcgctaacactatatatctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatc 4130  T
Q  510 cggttcttcttctctc 525  Q
    ||||||||||||||||    
T  4131 cggttcttcttctctc 4146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 3810 - 3863
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3810 atcctttactattaaaactagacttgatgagctgtcaccttagccctaatcact 3863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 311 - 525
Target Start/End: Original strand, 13844 - 14058
Alignment:
Q  311 ccgttgttacgtcacgtttcatatactttcatcaatatcatatcctttcaattacctctttgaactacaaacaatttt-aaactaaccaatcaacatcca 409  Q
    |||||||||| ||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13844 ccgttgttacctcacgtt-catatacttccattaatatcatatcctttcgattacctctttgaactacaaacaattttcaaactaaccaatcaacatcca 13942  T
Q  410 tcgctaacactatatatctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13943 tcgctaacactatatatctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatc 14042  T
Q  510 cggttcttcttctctc 525  Q
    ||||||||||||||||    
T  14043 cggttcttcttctctc 14058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 13722 - 13775
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13722 atcctttactattaaaactagacttgatgagctgtcaccttagccctaatcact 13775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 311 - 525
Target Start/End: Complemental strand, 25137 - 24923
Alignment:
Q  311 ccgttgttacgtcacgtttcatatactttcatcaatatcatatcctttcaattacctctttgaactacaaacaatttt-aaactaaccaatcaacatcca 409  Q
    |||||||||| ||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25137 ccgttgttacctcacgtt-catatacttccattaatatcatatcctttcgattacctctttgaactacaaacaattttcaaactaaccaatcaacatcca 25039  T
Q  410 tcgctaacactatatatctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25038 tcgctaacactatatatctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatc 24939  T
Q  510 cggttcttcttctctc 525  Q
    ||||||||||||||||    
T  24938 cggttcttcttctctc 24923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 25259 - 25206
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25259 atcctttactattaaaactagacttgatgagctgtcaccttagccctaatcact 25206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 311 - 525
Target Start/End: Original strand, 15707187 - 15707402
Alignment:
Q  311 ccgttgttacgtcacgtttcatatactttcatcaatatcatatcctttcaattacctctttgaactacaaacaatttt-aaactaaccaatcaacatcca 409  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15707187 ccgttgttacctcaggtttcatatacttccatcaatatcatatcctttcaattacctctttgaactacaaacaattttcaaactaaccaatcaacatcca 15707286  T
Q  410 tcgctaacactatatatctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatc 509  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15707287 tcgctaatactatatatctcttggaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatc 15707386  T
Q  510 cggttcttcttctctc 525  Q
    |||| |||||||||||    
T  15707387 cggtccttcttctctc 15707402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 17932007 - 17932213
Alignment:
Q  1 gccatgtcatcctcactcatttggccgttttccatccagtcatatgccacgttggatgatttaacgnnnnnnn--caaaaacttaacggttgggatttaa 98  Q
    |||| |||||||||||||||||||||||||| || |||  |||||||||||| |||||||||||||         |||||||||||||||| ||||||||    
T  17932007 gccacgtcatcctcactcatttggccgtttttcacccaa-catatgccacgtaggatgatttaacgtttttttttcaaaaacttaacggttaggatttaa 17932105  T
Q  99 ttggctagcgaagtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaat 198  Q
    ||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17932106 ttggctgataaagtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggaccaattcattaat 17932205  T
Q  199 taagccaa 206  Q
    ||||||||    
T  17932206 taagccaa 17932213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 17931491 - 17931288
Alignment:
Q  1 gccatgtcatcctcactcatttggccgttttccatccagtcatatgccacgttggatgatttaacgnnnnnnncaaaaacttaacggttgggatttaatt 100  Q
    |||| |||||| ||| | ||||| | |||||||| ||| ||||||||||||| | |||||||||||       |||||||||||||||||||||||||||    
T  17931491 gccacgtcatcgtcaattatttgcctgttttccacccaatcatatgccacgtagaatgatttaacgtttttttcaaaaacttaacggttgggatttaatt 17931392  T
Q  101 ggctagcgaagtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaatta 200  Q
    ||||  || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17931391 ggctgacggagtgtaacttaagggaccattttgtaacgttaataacttatgggaccaaattgtaaccaataaataacttaagggaccaattcattaatta 17931292  T
Q  201 agcc 204  Q
    ||||    
T  17931291 agcc 17931288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 114 - 206
Target Start/End: Complemental strand, 9268113 - 9268021
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  9268113 taacttaagggaccaaattgtaactttaataacttatgggaccaaaatgtaaccaataaataacttaagggaccaaatcattaattaagccaa 9268021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 49028509 - 49028600
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcca 205  Q
    |||||||||||||||  ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  49028509 taacttaagggaccaaattgtaacattaataatttatgggaccaaaatgtaaccaataaataacttaagggaccaaatcattaattaagcca 49028600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 53892456 - 53892253
Alignment:
Q  1 gccatgtcatcctcactcatttggccgttttccatccagtcatatgccacgttggatgatttaacgnnnnnnnc--aaaaacttaacggttgggatttaa 98  Q
    ||||||||||| ||||||||||  || ||||||| ||||| |||||||||    ||||||||||||       |  ||||| || |||||||||||||||    
T  53892456 gccatgtcatcatcactcatttatccattttccacccagttatatgccacacaagatgatttaacgtttttttctcaaaaaattgacggttgggatttaa 53892357  T
Q  99 ttggctagcgaagtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaat 198  Q
    ||||||  || || |||||||||  ||||||||| | || |||||||||||||||||| |||||||||| ||||||||||||||  || || ||||||||    
T  53892356 ttggctgacggagagtaacttaatagaccattttattacgttaataacttatgggacccaattgtaacctataaataacttaagaaaccaaatcattaat 53892257  T
Q  199 taag 202  Q
    ||||    
T  53892256 taag 53892253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 52677642 - 52677553
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagc 203  Q
    |||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| || | |||||||||||    
T  52677642 taacttaatggaccaaattgtaacgttaataacttatgggaccaaattgtaaccaacaaataacttaagggaccaaataattaattaagc 52677553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 206
Target Start/End: Original strand, 3990921 - 3991013
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||| || ||||||||||||| || ||| ||||||||||||    
T  3990921 taacttaagggaccaaattgtaacgttaataacttatgggaccaaaatgtaaccaacaattaacttaagggaccaaatcaataattaagccaa 3991013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 53898227 - 53898419
Alignment:
Q  13 tcactcatttggccgttttccatccagtcatatgccacgttggatgatttaacgnnnnnnn--caaaaacttaacggttgggatttaattggctagcgaa 110  Q
    ||||||||||| |||||||||| |||||||| |||||| | ||||||||||| |         |||||| || |||||||||||||||||||||  | ||    
T  53898227 tcactcatttgcccgttttccacccagtcatctgccacataggatgatttaaagtttttttttcaaaaaattgacggttgggatttaattggctgacaaa 53898326  T
Q  111 gtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagc 203  Q
    | |||||||||||||||||||| | || ||||||  ||||| ||||||||| ||||  |||||||||||| | ||| || | |||||||||||    
T  53898327 gagtaacttaagggaccattttattacattaatagtttatgagaccaaattataacttataaataacttacgagaccaaattattaattaagc 53898419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 10468726 - 10468827
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaacattttt 213  Q
    |||||||| ||||||  ||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||| || | ||||||||||||| |||| ||    
T  10468726 taacttaacggaccaaattgtaacgttaataacttatgagaccaaaatgtaaccaacaaataacttaagggaccaaatgattaattaagccatcattatt 10468825  T
Q  214 ta 215  Q
    ||    
T  10468826 ta 10468827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 15707065 - 15707118
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15707065 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 15707118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 4437800 - 4437680
Alignment:
Q  84 acggttgggatttaattggctagcgaagtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagg 183  Q
    ||||| |||||||| ||||||| |  ||| |||||||| ||||||    ||||| ||||||||||||||||||||||||||||||| |||||| |||| |    
T  4437800 acggtcgggatttatttggctaacagagtctaacttaaaggaccaaaacgtaacgttaataacttatgggaccaaattgtaaccaacaaataatttaatg 4437701  T
Q  184 gactaattcattaattaagcc 204  Q
    ||| ||  |||||||||||||    
T  4437700 gaccaaaccattaattaagcc 4437680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 12585404 - 12585492
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaag 202  Q
    |||||||||||||||  ||||||  ||||||||||||| || |||| ||||||||| |||||||||||||||| || ||||||||||||    
T  12585404 taacttaagggaccaaattgtaatgttaataacttatgagatcaaaatgtaaccaacaaataacttaagggaccaaatcattaattaag 12585492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 45667304 - 45667232
Alignment:
Q  131 ttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagc 203  Q
    ||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||| || |||||||||||||    
T  45667304 ttgtaacgttaataacttatgagaccaaaatgtaaccaacaaataacttaagggaccaaatcattaattaagc 45667232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 9450923 - 9450994
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| |||||||||||||||||||||  |||||||| |||||||||||||||| || ||||||||||||||    
T  9450923 gtaacgttaataacttatgggaccaaaacgtaaccaacaaataacttaagggaccaaatcattaattaagcc 9450994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 10286483 - 10286410
Alignment:
Q  131 ttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||| ||||||||| ||||||| ||| ||||||||| |||||||||||||||| || ||||||||||||||    
T  10286483 ttgtaacgttaataactaatgggactaaaatgtaaccaacaaataacttaagggaccaaatcattaattaagcc 10286410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 28451547 - 28451612
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||| |||||| ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  28451547 ttaatatcttatgagaccaaaatgtaaccaacaaataacttaagggactaaatcattaattaagcc 28451612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 25225880 - 25225793
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaa 201  Q
    ||||||||| ||| |  ||||||| ||||||||||||| ||||||| | ||||||| |||||||||||||||| || |||||||||||    
T  25225880 taacttaagcgacaaaattgtaacgttaataacttatgagaccaaaatataaccaacaaataacttaagggaccaaatcattaattaa 25225793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 28450821 - 28450750
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| |||||||||||||||| |||| ||||||||| |||||| ||||||||| || ||||||||||||||    
T  28450821 gtaacattaataacttatgggatcaaaatgtaaccaacaaataatttaagggaccaaatcattaattaagcc 28450750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 12315915 - 12315853
Alignment:
Q  144 aacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    |||||||||||||||||||||||| | ||||||||||| |||| || ||||||||||||||||    
T  12315915 aacttatgggaccaaattgtaacctacaaataacttaaaggaccaaatcattaattaagccaa 12315853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 4439038 - 4439107
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaag 202  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||||| |||||| |  ||||||||||||    
T  4439038 gtaacgttaataacttatgagaccaaattgtaaccaacaaataactttagggaccacgtcattaattaag 4439107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 12316124 - 12316059
Alignment:
Q  92 gatttaattggctagcgaagtgtaacttaagggaccattttgtaaccttaataacttatgggacca 157  Q
    |||||||||||||| || || |||||||| ||||||||||||| || |||||||||||||||||||    
T  12316124 gatttaattggctaacggagagtaacttatgggaccattttgttacattaataacttatgggacca 12316059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 9449786 - 9449715
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| ||||||||||||| |||||||  |||||||| ||||||||||| |||| || ||||||||||||||    
T  9449786 gtaacgttaataacttatgagaccaaaacgtaaccaacaaataacttaatggaccaaatcattaattaagcc 9449715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 49028347 - 49028281
Alignment:
Q  120 aagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggac 186  Q
    |||||||||  | ||||| ||||||| ||||||||| ||| ||||||||| ||||||||||||||||    
T  49028347 aagggaccaaatggtaacgttaataatttatgggactaaaatgtaaccaacaaataacttaagggac 49028281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 12585223 - 12585158
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||||||||| ||| ||| ||||| ||| |||||||||||||||| |  ||||||||||||||    
T  12585223 ttaataacttatgagactaaaatgtaatcaacaaataacttaagggaccacgtcattaattaagcc 12585158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 16067578 - 16067656
Alignment:
Q  122 gggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaag 202  Q
    |||||||  ||||||| ||||||||||||| ||| ||| ||||||||| |||||| |||| ||||||  ||||||||||||    
T  16067578 gggaccaaattgtaacgttaataacttatgagactaaaatgtaaccaacaaataatttaaaggacta--tcattaattaag 16067656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 52677804 - 52677884
Alignment:
Q  120 aagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaatta 200  Q
    |||||||||  || |||| ||||||||||||| ||| ||| ||||||||| ||||||| |||||||| |  ||||||||||    
T  52677804 aagggaccaaattataacattaataacttatgagactaaaatgtaaccaacaaataacctaagggaccacatcattaatta 52677884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 10202768 - 10202681
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaa 201  Q
    |||||||||| | ||  ||||||| ||||||| ||||||||||||| ||||||||  |||||| |||| |||  || |||||||||||    
T  10202768 taacttaaggcatcaaattgtaacgttaataatttatgggaccaaaatgtaaccagcaaataatttaaaggatcaaatcattaattaa 10202681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 10468564 - 10468478
Alignment:
Q  120 aagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    |||||||||  ||||||| |||| ||||||   ||| ||| ||||||||| |||||||||||||||| |  ||| ||||||||||||    
T  10468564 aagggaccaaattgtaacgttaaaaacttagatgactaaaatgtaaccaacaaataacttaagggaccacatcagtaattaagccaa 10468478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 49287480 - 49287428
Alignment:
Q  154 accaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    |||||| | ||||||| |||||||| ||| |||||| ||||||||||||||||    
T  49287480 accaaaatttaaccaacaaataactaaagagactaaatcattaattaagccaa 49287428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 178; Significance: 9e-96; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 313 - 525
Target Start/End: Original strand, 44495336 - 44495548
Alignment:
Q  313 gttgttacgtcacgtttcatatactttcatcaatatcatatcctttcaattacctctttgaactacaaacaatttt-aaactaaccaatcaacatccatc 411  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  44495336 gttgttacctcacatttcatatacttccatcaatatcatatcctttcaattacctcttt-aactacaaacaattttcaaactaaccaatcaacatccatc 44495434  T
Q  412 gctaacactatatatctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatccg 511  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44495435 gctaacactgtatatctcttcaaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatccg 44495534  T
Q  512 gttcttcttctctc 525  Q
    ||||||||||||||    
T  44495535 gttcttcttctctc 44495548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 44495212 - 44495265
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44495212 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 44495265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 10536065 - 10536000
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  10536065 ttaatatcttatgggaccaaaatgtaaccaacaaataacttaagggactaaatcattaattaagcc 10536000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 18203302 - 18203391
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagc 203  Q
    ||||||||| ||| |  ||||||| |||||||||||||| |||||| | |||||||||||||||||||||||| || |||||||||||||    
T  18203302 taacttaagagactaaattgtaacgttaataacttatggaaccaaaatataaccaataaataacttaagggaccaaatcattaattaagc 18203391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 10536792 - 10536863
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| |||||||||||||||| |||| ||||||||| |||||| ||||||||| || ||||||||||||||    
T  10536792 gtaacattaataacttatgggatcaaaatgtaaccaacaaataatttaagggaccaaatcattaattaagcc 10536863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 30905978 - 30906060
Alignment:
Q  120 aagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaag 202  Q
    |||||||||  ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||| ||| |  ||||||||||||    
T  30905978 aagggaccaaattgtaacgttaataacttatgggactaaaatgtaaccaacaaataacttaagagaccacatcattaattaag 30906060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 32539456 - 32539520
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagc 203  Q
    ||||||||||||| ||  ||| ||||||||| |||||||||||||||| || |||||||||||||    
T  32539456 ttaataacttatgagattaaaatgtaaccaacaaataacttaagggaccaaatcattaattaagc 32539520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 41434876 - 41434925
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatc 297  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  41434876 atcctttactattaacgctagacttgatgagctgtca-cttaaccctaatc 41434925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 18202846 - 18202771
Alignment:
Q  131 ttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    ||||||| ||||||||||||| ||| ||| ||||| ||| |||||||||||  |||||  | ||||||||||||||    
T  18202846 ttgtaacattaataacttatgagacgaaaatgtaatcaacaaataacttaatagactacattattaattaagccaa 18202771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 30905483 - 30905397
Alignment:
Q  117 cttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagc 203  Q
    ||||||||||||  ||||||| ||||||| |||| | |  ||| | ||||||| |||||| ||||||||| || |||||||||||||    
T  30905483 cttaagggaccaaattgtaacgttaataagttatagaattaaaatataaccaacaaataatttaagggaccaaatcattaattaagc 30905397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 42934915 - 42934871
Alignment:
Q  252 ttactattaaagctagacttgatgagctgtcaccttagccctaatc 297  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||||    
T  42934915 ttactattaacgctagacttgatgagctgtca-cttaaccctaatc 42934871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1526 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold1526
Description:

Target: scaffold1526; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 425 - 525
Target Start/End: Complemental strand, 1360 - 1260
Alignment:
Q  425 atctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatccggttcttcttctct 524  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1360 atctcttggaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatccggtccttcttctct 1261  T
Q  525 c 525  Q
    |    
T  1260 c 1260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 5e-45; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 311 - 422
Target Start/End: Original strand, 3377244 - 3377356
Alignment:
Q  311 ccgttgttacgtcacgtttcatatactttcatcaatatcatatcctttcaattacctctttgaactacaaacaatttt-aaactaaccaatcaacatcca 409  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3377244 ccgttgttacctcacgtttcatataattccatcaatatcatatcctttcaattacctctttgaactacaaacaattttcaaactaaccaatcaacatcca 3377343  T
Q  410 tcgctaacactat 422  Q
    |||||||||||||    
T  3377344 tcgctaacactat 3377356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 425 - 525
Target Start/End: Original strand, 3378173 - 3378273
Alignment:
Q  425 atctcttcgaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatccggttcttcttctct 524  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3378173 atctcttggaatgtctatccatcttaaaaaacagtgttgcacactgctccatattccttactttctctctaacatcattccaatccggtccttcttctct 3378272  T
Q  525 c 525  Q
    |    
T  3378273 c 3378273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 38695134 - 38695224
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||  ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  38695134 taacttaagggaccaaattgtaacgttaataatttatgggaccaaaatgtaaccaataaataacttaagggaccaaatcattaattaagcc 38695224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 4410599 - 4410719
Alignment:
Q  92 gatttaattggctagcgaagtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaatt 191  Q
    |||||| ||||||| |  ||| |||||||||||||||   |||| | ||||||||||| ||||||||||||||||||| |||||||||||||||| || |    
T  4410599 gatttatttggctaacagagtctaacttaagggaccaaaatgtagcgttaataacttacgggaccaaattgtaaccaacaaataacttaagggaccaaat 4410698  T
Q  192 cattaattaagccaacatttt 212  Q
    ||||||||||||| |||||||    
T  4410699 cattaattaagcctacatttt 4410719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 18166723 - 18166625
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaacatttt 212  Q
    |||||||||||||||  ||||||| ||||||||||||| || |||| ||||||||| |||||| ||||||||| || ||||||||||||||||| ||||    
T  18166723 taacttaagggaccaaattgtaacgttaataacttatgagatcaaaatgtaaccaacaaataatttaagggaccaaatcattaattaagccaacttttt 18166625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 3377122 - 3377175
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 300  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3377122 atcctttactattaaagctagacttgatgaactgtcaccttagccctaatcact 3377175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 4734217 - 4734288
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| |||||||||||| ||| |||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  4734217 gtaacgttaataacttataggatcaaaatgtaaccaacaaataacttaagggaccaattcattaattaagcc 4734288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 14159277 - 14159206
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| |||||||||||||||||||||  |||||||| |||||||||||||||| || ||||||||||||||    
T  14159277 gtaacgttaataacttatgggaccaaaacgtaaccaacaaataacttaagggaccaaatcattaattaagcc 14159206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 4733369 - 4733302
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||  || ||||||||||||||||    
T  4733369 ttaataacttatgggaccaaaatgtaaccaacaaataatttaagggatcaaatcattaattaagccaa 4733302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 14160421 - 14160492
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| |||||||||||||||||||||  |||||||| ||||||||||| |||| || ||||||||||||||    
T  14160421 gtaacgttaataacttatgggaccaaaacgtaaccaacaaataacttaatggaccaaatcattaattaagcc 14160492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 42963031 - 42963104
Alignment:
Q  131 ttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||| ||||||||||||| ||| ||| ||||||||| |||||||||||||||| |  ||||||||||||||    
T  42963031 ttgtaacgttaataacttatgagactaaaatgtaaccaacaaataacttaagggaccacatcattaattaagcc 42963104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 4409250 - 4409164
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaatta 200  Q
    |||||||||||||||    ||||| ||||||||||||| |||||||||||||| || |||||| ||||| ||| || ||||||||||    
T  4409250 taacttaagggaccaaaacgtaacgttaataacttatgagaccaaattgtaactaacaaataatttaagagaccaaatcattaatta 4409164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 42962858 - 42962768
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||  ||||||| ||| | ||||||| || |||| || |||||| ||||||| |||||||| || ||||||||||||||    
T  42962858 taacttaagggaccaaattgtaacgttagtcacttatgagatcaaaatgcaaccaacaaataacctaagggaccaaatcattaattaagcc 42962768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 18171351 - 18171416
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||||||||||||| ||| ||||||||| |||||| ||||||||| |  ||||||||||||||    
T  18171351 ttaataacttatgggactaaaatgtaaccaacaaataatttaagggaccatatcattaattaagcc 18171416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 38694972 - 38694906
Alignment:
Q  120 aagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggac 186  Q
    |||||||||  | ||||| ||||||| ||||||||| ||| ||||||||| ||||||||||||||||    
T  38694972 aagggaccaaatggtaacgttaataatttatgggactaaaatgtaaccaacaaataacttaagggac 38694906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 3081203 - 3081236
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctg 280  Q
    |||||||||||||||||| |||||||||||||||    
T  3081203 atcctttactattaaagccagacttgatgagctg 3081236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 9114932 - 9114817
Alignment:
Q  91 ggatttaattggctagcgaagtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaat 190  Q
    ||||||| ||||||| |||| | ||| |||||||||||    ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| ||     
T  9114932 ggatttatttggctaacgaattataaattaagggaccaaaacgtaacgttaataacttatgggaccaaaatgtaaccaacaaataacttaagggacaaaa 9114833  T
Q  191 tcattaattaagccaa 206  Q
    ||||||||||||||||    
T  9114832 tcattaattaagccaa 9114817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 14904602 - 14904676
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaacattttt 213  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| | ||||||    
T  14904602 ttaatatcttatgggaccaaaatgtaaccaacaaataacttaagggactaaatcattaattaagcctatattttt 14904676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 14903877 - 14903804
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    ||||| |||||||||||||||| |||| ||||||||| |||||||||||||||| || ||||||||||||||||    
T  14903877 gtaacgttaataacttatgggatcaaaatgtaaccaacaaataacttaagggaccaaatcattaattaagccaa 14903804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 17690936 - 17691007
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| ||||||||||||||||||| |   ||||||| |||||||||||||||| || ||||||||||||||    
T  17690936 gtaacgttaataacttatgggaccagaacataaccaacaaataacttaagggaccaaatcattaattaagcc 17691007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 9116068 - 9116132
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||| ||| |||| |||||||||||||    
T  9116068 ttaataacttatgagaccaaaatgtaaccaacaaataacttaaagga-taatacattaattaagcc 9116132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 37499438 - 37499508
Alignment:
Q  134 taaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||| ||||||||||||| ||||||| ||||||||| |||||||||||| |   || ||||||||||||||    
T  37499438 taacattaataacttatgagaccaaaatgtaaccaacaaataacttaagaggtcaaatcattaattaagcc 37499508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 17689807 - 17689738
Alignment:
Q  132 tgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaag 202  Q
    |||||| || |||||||||| |||||||  |||| ||| |||||||||||||||| || ||||||||||||    
T  17689807 tgtaacgtttataacttatgagaccaaac-gtaatcaacaaataacttaagggaccaaatcattaattaag 17689738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 23322344 - 23322434
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||  ||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||| || ||||||||||||||    
T  23322344 taacttaagggaccaaattgtaacgttaataacttatggaaccaaaatgtaaccaacaaataacttaagggaccaaatcattaattaagcc 23322434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 34634188 - 34634068
Alignment:
Q  84 acggttgggatttaattggctagcgaagtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagg 183  Q
    ||||| |||||||| ||| ||| |  ||| |||||||| ||||||   |||||| ||||||||||||||||||||||||||||||| ||||||||||| |    
T  34634188 acggtagggatttatttgactaacagagtctaacttaatggaccaaaatgtaacgttaataacttatgggaccaaattgtaaccaacaaataacttaaag 34634089  T
Q  184 gactaattcattaattaagcc 204  Q
    ||| |  ||||||||||||||    
T  34634088 gaccacatcattaattaagcc 34634068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 42793038 - 42792948
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||  ||||||| ||||||| ||||||||||||| || |||||| |||||||||||| ||| || ||||||||||||||    
T  42793038 taacttaagggaccaaattgtaacattaataatttatgggaccaaaatgaaaccaacaaataacttaagcgaccaaatcattaattaagcc 42792948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 9380001 - 9379930
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| |||||||||| ||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  9380001 gtaacgttaataacttgtggaaccaaaatgtaaccaacaaataacttaagggaccaattcattaattaagcc 9379930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 9380718 - 9380788
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagc 203  Q
    ||||| |||||||||||||||| |||| ||||||||| |||||||||||||||  ||||||||||||||||    
T  9380718 gtaacattaataacttatgggatcaaaatgtaaccaacaaataacttaagggatcaattcattaattaagc 9380788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 43183314 - 43183228
Alignment:
Q  120 aagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    |||||||||  ||||||  ||||||| ||||||||||||| ||||||||| |||||||||||||||| || | ||||||||||||||    
T  43183314 aagggaccaaattgtaatgttaataatttatgggaccaaaatgtaaccaacaaataacttaagggaccaaattattaattaagccaa 43183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 23322182 - 23322098
Alignment:
Q  120 aagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||  ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||  |||||  ||||||||||||||    
T  23322182 aagggaccaaattgtaacattaataacttatgggactaaaatgtaaccaacaaataacttaatagactacatcattaattaagcc 23322098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 1501077 - 1501148
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaaggga 185  Q
    |||||||||||||||   |||||| ||||||| ||||||||||||| || ||||||||||||||||||||||    
T  1501077 taacttaagggaccaaaatgtaacgttaataatttatgggaccaaaatgaaaccaataaataacttaaggga 1501148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 5841123 - 5841213
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||| | ||||  ||||||| ||||||| ||||||||||||| ||||||||| |||||| ||||| ||| || ||||||||||||||    
T  5841123 taacttaaagaaccaaattgtaacgttaataatttatgggaccaaaatgtaaccaacaaataagttaagagaccaaatcattaattaagcc 5841213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 5840950 - 5840880
Alignment:
Q  131 ttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaa 201  Q
    ||||||| |||||||||||||| || ||| | ||||||| |||||||||||||||| |  |||||||||||    
T  5840950 ttgtaacgttaataacttatggcactaaaatataaccaacaaataacttaagggaccacatcattaattaa 5840880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 20244522 - 20244588
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcca 205  Q
    ||||||| ||||||||||||| ||||||||| |||||| |||||  || || |||||||||||||||    
T  20244522 ttaataatttatgggaccaaaatgtaaccaacaaataatttaagtaacaaaatcattaattaagcca 20244588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 15933602 - 15933663
Alignment:
Q  143 taacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||| ||||| ||| ||||||||| |||||||||||||||| || |||| |||||||||    
T  15933602 taacttaagggactaaaatgtaaccaacaaataacttaagggaccaaatcatgaattaagcc 15933663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 9e-25; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 27864889 - 27864799
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||| || ||||||||||||||    
T  27864889 taacttaagggaccaaattgtaacgttaataacttatgggaccaaaatgtaaccaacaaataacttacgggaccaaatcattaattaagcc 27864799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 24107241 - 24107151
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||||| ||||||||| |||||||| ||||||| || ||||||||||||||    
T  24107241 taacttaagtgaccaaattgtaacgttaataacttatgggaccaaaatgtaaccaacaaataactcaagggaccaaatcattaattaagcc 24107151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 31596752 - 31596823
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| || ||||||||||||||    
T  31596752 gtaacgttaataacttatgggaccaaaatgtaaccaacaaataacttaagggaccaaatcattaattaagcc 31596823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 38758860 - 38758945
Alignment:
Q  121 agggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    ||||||||  || |||| || |||||||||||||||||| ||||||||| |||||||||||||||| || ||||||||||||||||    
T  38758860 agggaccaaattataacgttgataacttatgggaccaaaatgtaaccaacaaataacttaagggaccaaatcattaattaagccaa 38758945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 3171573 - 3171489
Alignment:
Q  120 aagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||  ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||| |  ||||||||||||||    
T  3171573 aagggaccaaattgtaacattaataacttatgggactaaaatgtaaccaacaaataacttaagggaccacatcattaattaagcc 3171489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 27865046 - 27865134
Alignment:
Q  116 acttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||| ||||||  ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||| |  ||||||||||||||    
T  27865046 acttaaaggaccaaattgtaacgttaataacttatgggactaaaatgtaaccaacaaataacttaagggaccacatcattaattaagcc 27865134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 46685537 - 46685601
Alignment:
Q  140 taataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||    
T  46685537 taataacttatgggaccaaaatgtaaccaataaataatttaagggaccaaatcattaattaagcc 46685601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 16908000 - 16907930
Alignment:
Q  134 taaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||| |||||||||||||||||||||  |||||||| |||||||||||||||| || ||||||||||||||    
T  16908000 taacgttaataacttatgggaccaaaacgtaaccaacaaataacttaagggaccaaatcattaattaagcc 16907930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 18025941 - 18025868
Alignment:
Q  143 taacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagccaacattttttat 216  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| ||  ||||||||||||||||  |||||||    
T  18025941 taacttatgggaccaaaatgtaaccaacaaataacttaagggaccaaagcattaattaagccaaccctttttat 18025868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 19860579 - 19860491
Alignment:
Q  116 acttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||| ||||||  ||||||| ||||||||||||||||| ||| |||||||||||||||||||||  ||| |  ||||||||||||||    
T  19860579 acttaaaggaccaaattgtaacgttaataacttatgggactaaaatgtaaccaataaataacttaatagaccacatcattaattaagcc 19860491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 46684188 - 46684098
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||    ||||  |||||||||||||||| |||| ||||||||| |||||||||||| ||| || ||||||||||||||    
T  46684188 taacttaagggaccaaaacgtaatgttaataacttatgggatcaaaatgtaaccaacaaataacttaagcgaccaaatcattaattaagcc 46684098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 38758681 - 38758608
Alignment:
Q  131 ttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||| |  ||| ||||||||||    
T  38758681 ttgtaacgttaataacttatgggactaaaatgtaaccaacaaataacttaagggacaacatcactaattaagcc 38758608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 24107405 - 24107487
Alignment:
Q  122 gggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||  ||||||| ||||||||||||||||| ||| ||||||||| || |||||||| |||| |  ||||||||||||||    
T  24107405 gggaccaaattgtaacgttaataacttatgggactaaaatgtaaccaacaattaacttaatggaccacatcattaattaagcc 24107487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 11422428 - 11422377
Alignment:
Q  155 ccaaattgtaaccaataaataacttaagggactaattcattaattaagccaa 206  Q
    ||||| ||||||||| |||||||||||||||| || ||||||||||||||||    
T  11422428 ccaaaatgtaaccaacaaataacttaagggaccaaatcattaattaagccaa 11422377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 14812500 - 14812450
Alignment:
Q  131 ttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaa 181  Q
    ||||||| ||||||||||||||||||||| |||||| || |||||||||||    
T  14812500 ttgtaacgttaataacttatgggaccaaaatgtaactaaaaaataacttaa 14812450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 21792300 - 21792235
Alignment:
Q  121 agggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggac 186  Q
    ||||||||  ||||||| ||||||||||||||||| ||| |||||||||  ||||| |||||||||    
T  21792300 agggaccaaattgtaacgttaataacttatgggactaaaatgtaaccaaccaataaattaagggac 21792235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 54446261 - 54446349
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaat-tgtaaccaataaataacttaagggactaattcattaattaa 201  Q
    ||||||||  |||||  ||||||  |||||||||||| ||||||||  |||||| || |||||||||||||||| || |||||||||||    
T  54446261 taacttaaaagaccaaattgtaatgttaataacttataggaccaaaaatgtaactaacaaataacttaagggaccaaatcattaattaa 54446349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 18026116 - 18026163
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataactta 180  Q
    ||||| ||||||||||||||||| ||| ||||||||| ||||||||||    
T  18026116 gtaacgttaataacttatgggactaaaatgtaaccaacaaataactta 18026163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 19860736 - 19860802
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaa 181  Q
    |||||||| ||||||  ||||||  |||||||||| || ||||||| |||||||||||||||||||||    
T  19860736 taacttaaaggaccaaattgtaatgttaataactt-tgagaccaaaatgtaaccaataaataacttaa 19860802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 21792362 - 21792433
Alignment:
Q  114 taacttaagg-gaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaaggg 184  Q
    |||||||||| |||||  ||||||| |||||||||||  |||||||| ||||| ||| ||||||||||||||    
T  21792362 taacttaaggagaccaaattgtaacgttaataacttagaggaccaaaatgtaaacaacaaataacttaaggg 21792433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 3171735 - 3171822
Alignment:
Q  114 taacttaagggaccat-tttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||  |||||||| |||||||    |||||  ||| ||||||| | |||||||||||||||| || ||||||||||||||    
T  3171735 taacttaagggaccaaatttgtaacattaataa----tgggatgaaaatgtaaccgacaaataacttaagggaccaaatcattaattaagcc 3171822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 19985 - 19897
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaag 202  Q
    |||||||||||||||  ||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||| || ||||||||||||    
T  19985 taacttaagggaccaaattgtaacgttaataacttatgcgaccaaaatgtaaccaacaaataacttaagggaccaaatcattaattaag 19897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 9e-22; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 16000047 - 16000104
Alignment:
Q  243 atacatcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16000047 atacatcctttactattaatgctagacttgatgagctgtcaccttagccctaatcact 16000104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 4265222 - 4265312
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||| ||||||  ||||||| |||||||||||||||| |||| ||||||| | || ||||||||||||| || ||||||||||||||    
T  4265222 taacttaatggaccaaattgtaacgttaataacttatgggatcaaaatgtaaccgacaactaacttaagggaccaaatcattaattaagcc 4265312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 8905713 - 8905639
Alignment:
Q  131 ttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcca 205  Q
    ||||||| ||||||||||||| ||||||| ||||||||| |||||||||||| ||| || ||||| |||||||||    
T  8905713 ttgtaacattaataacttatgagaccaaaatgtaaccaacaaataacttaagagaccaaatcattgattaagcca 8905639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 8342673 - 8342731
Alignment:
Q  143 taacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaa 201  Q
    ||||||||| ||||||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  8342673 taacttatgagaccaaagtgtaaccaaaaaataacttaatggaccaattcattaattaa 8342731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 8328266 - 8328197
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaag 202  Q
    ||||| |||||||||| || ||||||| | |||| |||||||||||||||||||  ||||||||||||||    
T  8328266 gtaacgttaataacttgtgagaccaaaatctaactaataaataacttaagggaccgattcattaattaag 8328197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 14586231 - 14586288
Alignment:
Q  243 atacatcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 300  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||| |||||    
T  14586231 atacatcctttactattaacgctagacttgatgcattgtcaccttagccctagtcact 14586288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 18471777 - 18471842
Alignment:
Q  139 ttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||||||||| ||||||| ||||||||| | |||||||||||||| || ||||||| ||||||    
T  18471777 ttaataacttatgagaccaaaatgtaaccaacagataacttaagggaccaaatcattaactaagcc 18471842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 25749396 - 25749447
Alignment:
Q  134 taaccttaataacttatgggaccaaattgtaaccaataaataacttaaggga 185  Q
    |||| ||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  25749396 taacgttaataacttatgagactaaattgtaaccaacaaataacttaaggga 25749447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 8329046 - 8329115
Alignment:
Q  133 gtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagc 203  Q
    ||||| |||||||||| || ||||||| ||||||||| |||||||||||  ||| ||||||||||||||||    
T  8329046 gtaacgttaataacttttgagaccaaaatgtaaccaacaaataacttaa-agaccaattcattaattaagc 8329115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 18470209 - 18470139
Alignment:
Q  134 taaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||| ||||||||||||| | ||||| ||||||||| |||||| |||||| || || ||||||||||||||    
T  18470209 taacattaataacttatgtggccaaaatgtaaccaacaaataatttaaggcacaaaatcattaattaagcc 18470139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 6e-20; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 3659198 - 3659287
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||  ||||||  ||||||||||||||||||||| |||||| || |||||||||||||||| || ||||||||||||||    
T  3659198 taacttaagggaccaaattgtaag-ttaataacttatgggaccaaaatgtaactaacaaataacttaagggaccaaatcattaattaagcc 3659287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 5367661 - 5367750
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||||||||||||  ||||||| |||||||||||||| |||||| ||||||||| ||||||||||| |||| || ||||||||||||||    
T  5367661 taacttaagggaccaaattgtaacgttaataacttatggaaccaaaatgtaaccaacaaataacttaa-ggaccaaatcattaattaagcc 5367750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 8286860 - 8286788
Alignment:
Q  132 tgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||||| ||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  8286860 tgtaacgttaattacttaagggaccaaaatgtaaccaacaaataacttaagggactaaatcattaattaagcc 8286788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 3659025 - 3658952
Alignment:
Q  131 ttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| |  ||| ||||||||||    
T  3659025 ttgtaactttaataacttatgggactaaactgtaaccaataaataacttaagggaccacatcagtaattaagcc 3658952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 8287449 - 8287501
Alignment:
Q  152 ggaccaaattgtaaccaataaataacttaagggactaattcattaattaagcc 204  Q
    |||| ||| ||||||||| |||||||||||||||| || ||||||||||||||    
T  8287449 ggactaaaatgtaaccaacaaataacttaagggaccaaatcattaattaagcc 8287501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 27765318 - 27765351
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctg 280  Q
    |||||||| |||||||||||||||||||||||||    
T  27765318 atcctttattattaaagctagacttgatgagctg 27765351  T

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Target: scaffold0076 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 1929 - 1876
Alignment:
Q  247 atcctttactattaaagctagacttgatgagctgtcaccttagccctaatcact 300  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  1929 atcctttactattaacgctagacttgatgagttgtcaccttagccctaatcact 1876  T

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Target: scaffold0008 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 266866 - 266953
Alignment:
Q  114 taacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagggactaattcattaattaa 201  Q
    |||||||||||||||  || |||  ||||||||||||| ||||||| ||||||||| ||||||||||| |||| || |||||||||||    
T  266866 taacttaagggaccaaattataaggttaataacttatgtgaccaaaatgtaaccaacaaataacttaaaggaccaaatcattaattaa 266953  T

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Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 266705 - 266642
Alignment:
Q  120 aagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagg 183  Q
    |||||||||  || |||| |||||||||||| |||| ||| ||||||||| |||||||||||||    
T  266705 aagggaccaaattataacattaataacttatcggactaaaatgtaaccaacaaataacttaagg 266642  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 53915 - 53871
Alignment:
Q  481 cttactttctctctaacatcattccaatccggttcttcttctctc 525  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  53915 cttactttctctctaacatcattccaatccggtccttcttctctc 53871  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 93743 - 93652
Alignment:
Q  92 gatttaattggctagcgaagtgtaacttaagggaccattttgtaaccttaataacttatgggaccaaattgtaaccaataaataacttaagg 183  Q
    |||||| ||||||| | ||  |||||||||||||| |  ||||||| ||||||| ||||||||||||| |||||| || |||||||||||||    
T  93743 gatttatttggctaacaaatagtaacttaagggactaaattgtaacgttaataatttatgggaccaaaatgtaactaacaaataacttaagg 93652  T

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