View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12877_low_32 (Length: 353)
Name: NF12877_low_32
Description: NF12877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12877_low_32 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 55 - 335
Target Start/End: Original strand, 3816415 - 3816700
Alignment:
| Q |
55 |
taatttggaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaa |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| || |||||| |
|
|
| T |
3816415 |
taatttggaagataaatatccaattacctgcactccacaccaaagcttttccactagactatctgacaagtccaatataacaagattctttgcagaaaac |
3816514 |
T |
 |
| Q |
155 |
ttctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga--caatc-aaaacctt |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| |
|
|
| T |
3816515 |
ttctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaaaacaaatcaaaaacctt |
3816614 |
T |
 |
| Q |
252 |
ccataccaagaaaatac-aaaaaccgcaggttggtcatcttatc-aaatacatgacggcttaactttagctccctcattgttggca |
335 |
Q |
| |
|
| |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
3816615 |
ctataccaccaaaatacaaaaaaccgcaggttggtcatcttatcaaaatacatgacggcttaacttcagctccctcattgttggca |
3816700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 55 - 337
Target Start/End: Original strand, 3808839 - 3809121
Alignment:
| Q |
55 |
taatttggaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaa |
154 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||| |||||||||||| | | ||||| |||||| |||||||||||||||||||| |||||| |
|
|
| T |
3808839 |
taatttggaagacacgtatccaattacctgcactccacgccaaagcttttccattttactatcatacaagttcaatataacaagattctctgcagaaaag |
3808938 |
T |
 |
| Q |
155 |
ttctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttcca |
254 |
Q |
| |
|
||||||||||||||||||||||| || || |||||||||||||| ||| | | |||||||||||||| || |||||||||||||| |||| || | |
|
|
| T |
3808939 |
ttctctgggaatgattttagaggacaatacatccaatgaagatatcttagattagttggaaaagattgaaacctttgaggaagacaattgaaactatcta |
3809038 |
T |
 |
| Q |
255 |
taccaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattgttggcaga |
337 |
Q |
| |
|
|| || |||||||||||| || || ||||||||||||||||||||| || ||||||||| |||| |||||||||| ||||| |
|
|
| T |
3809039 |
tatcaccaaaatacaaaaatcgaagtttggtcatcttatcaaatacacgagggcttaactcgagcttcctcattgttcgcaga |
3809121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 75 - 315
Target Start/End: Complemental strand, 3956760 - 3956520
Alignment:
| Q |
75 |
caattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgattttag |
174 |
Q |
| |
|
|||||| |||||||||||||||||| ||||| | ||| ||| ||||| ||||||||||||||||||||||| |||||| ||||||| || ||||||||| |
|
|
| T |
3956760 |
caattatctgcactccacaccaaagtttttccagtaggctacctgacaggtccaatataacaagattctctgcagaaaacttctctgagagtgattttag |
3956661 |
T |
 |
| Q |
175 |
agggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccataccaagaaaatacaaaaac |
274 |
Q |
| |
|
|||| | || |||||||||||||||||| | || |||||||||||||| ||||| ||||| || ||| ||||| || || || |||||| ||||||| |
|
|
| T |
3956660 |
agggtaacatatccaatgaagatattttagatcagttggaaaagattgaatcccttcaggaatacgatccaaaccatctatgtcacgaaaatccaaaaac |
3956561 |
T |
 |
| Q |
275 |
cgcaggttggtcatcttatcaaatacatgacggcttaactt |
315 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3956560 |
tgcaggttggtcatcttatcaaatacattggggcttaactt |
3956520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 62 - 238
Target Start/End: Original strand, 4024013 - 4024189
Alignment:
| Q |
62 |
gaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctg |
161 |
Q |
| |
|
||||| |||||| || |||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| || |||||| ||||||| |
|
|
| T |
4024013 |
gaagagaaatattcacttacctgcactccacaccaaagcttttccactagactatctgacaagtccaatataacaagattctttgcagaaaacttctctg |
4024112 |
T |
 |
| Q |
162 |
ggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga |
238 |
Q |
| |
|
||||||||||||||||| | | ||||| ||||||| ||| | || |||||||||||||||||||||||||||| |
|
|
| T |
4024113 |
ggaatgattttagagggtaattcatccaagaaagatatcttagatcagttggaaaagattgaagcccttgaggaaga |
4024189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 70 - 320
Target Start/End: Original strand, 4001127 - 4001377
Alignment:
| Q |
70 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
169 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||| | | |||||| ||| |||||||||||||||||||||| | |||||| |||| |||||||||| |
|
|
| T |
4001127 |
atattcaattacctgcactccacaccaaagattttccactcgactatgtgaaaagtccaatataacaagattctttccagaaaacttctttgggaatgat |
4001226 |
T |
 |
| Q |
170 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccataccaagaaaataca |
269 |
Q |
| |
|
||||||||| | | | ||||| || |||| ||| | || ||| |||||||||||||||||||||||| || ||| | | |||||| |||| || |
|
|
| T |
4001227 |
tttagagggtaatgtatccaacaaatatatcttagatcagttgggaaagattgaagcccttgaggaagaagttccaaatcgtatttaccaatgaaatcca |
4001326 |
T |
 |
| Q |
270 |
aaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct |
320 |
Q |
| |
|
|| | |||||||||||||||||| ||||||||||| |||||||||| |||| |
|
|
| T |
4001327 |
aatatcgcaggttggtcatcttagcaaatacatgagggcttaacttcagct |
4001377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 320
Target Start/End: Complemental strand, 3934252 - 3933996
Alignment:
| Q |
70 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
169 |
Q |
| |
|
|||| |||||||||| ||||||||||| |||||||| | | ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
3934252 |
atattcaattacctgtactccacaccatagcttttccattcgactaagatacaagtccaatataacaagattctctgcagaaaacttctctgggaatgat |
3934153 |
T |
 |
| Q |
170 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaa---ccttccataccaa---gaa |
263 |
Q |
| |
|
||||||||| | || ||||||||||||| | | |||| ||||||||||| |||||||||||||| | ||| ||| | || | | ||| || |
|
|
| T |
3934152 |
tttagagggtaacatacccaatgaagatatctaagaccagttggaaaagattcaagcccttgaggaaaaagatccaaatagtcatcaaaatcaacccaaa |
3934053 |
T |
 |
| Q |
264 |
aatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct |
320 |
Q |
| |
|
||| |||||| | ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3934052 |
aattcaaaaattggaggttggtcatcttatcaaatacatgagggcttaactttagct |
3933996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 70 - 238
Target Start/End: Original strand, 3985821 - 3985989
Alignment:
| Q |
70 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
169 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||| | ||| ||||| |||||||||||||||||||| ||||||| |||||| |||| ||| ||||| |
|
|
| T |
3985821 |
atattcaattacctgtactccacaccaaagcttttctactaggctatacgacaagtccaatataacaagtttctctgcagaaaacttctttggcaatgac |
3985920 |
T |
 |
| Q |
170 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga |
238 |
Q |
| |
|
| ||||||| | | | ||||||||||||| ||| | || |||||||| ||||||||||||||||||| |
|
|
| T |
3985921 |
tctagagggtaatgtacccaatgaagatatcttagatcagttggaaaaggttgaagcccttgaggaaga |
3985989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 70 - 238
Target Start/End: Original strand, 4217452 - 4217620
Alignment:
| Q |
70 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
169 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||| | | |||||| ||||| |||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
4217452 |
atattcaattacctgtactccacaccaaagcttttccactttactataacgcaagttcaatataacaagattctctgcagaaaagttctctgggaatgat |
4217551 |
T |
 |
| Q |
170 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga |
238 |
Q |
| |
|
||||||||| | || |||| |||||||| ||| | || ||||||||||||||||||| |||||||| |
|
|
| T |
4217552 |
tttagagggtaacatacccaacgaagatatcttagatcatttggaaaagattgaagccctcgaggaaga |
4217620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 3800482 - 3800671
Alignment:
| Q |
131 |
ataacaagattctctgaagaaaaattctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagccctt |
230 |
Q |
| |
|
||||||||||||| || |||||| |||||||||||||||||||||||| | | |||||||||||||| ||| | || |||||||||||||||||||| |
|
|
| T |
3800482 |
ataacaagattctttgcagaaaacttctctgggaatgattttagagggtaatgcatccaatgaagatatcttagatcatttggaaaagattgaagccctt |
3800581 |
T |
 |
| Q |
231 |
gaggaagacaatcaaaaccttccataccaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct |
320 |
Q |
| |
|
|||||||| || ||| | | ||||| |||||| |||| | |||| ||||||||||||| ||||||||||| |||||||||| |||| |
|
|
| T |
3800582 |
gaggaagaagttccaaatcgtatttaccatgaaaatccaaatatcgcaagttggtcatcttagcaaatacatgagggcttaacttcagct |
3800671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 3921031 - 3920865
Alignment:
| Q |
70 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
169 |
Q |
| |
|
|||| |||||||||| ||||||||||| |||||||| | | ||| | ||||||||||||||||||||||||| | | |||| ||||||| ||||||| |
|
|
| T |
3921031 |
atattcaattacctgtactccacaccatagcttttccattcgaccaagatacaagtccaatataacaagattctcagcaaaaaacttctctgagaatgat |
3920932 |
T |
 |
| Q |
170 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaa |
236 |
Q |
| |
|
||||||||| | | | |||||||||||||| ||| |||| ||||||||||| |||||||||||||| |
|
|
| T |
3920931 |
tttagagggtaatctatccaatgaagatatcttaaaccagttggaaaagattcaagcccttgaggaa |
3920865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 4008825 - 4008942
Alignment:
| Q |
61 |
ggaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctct |
160 |
Q |
| |
|
|||||||| ||| ||||||||| ||||||| ||||||||||||| | | | ||| |||||||||| ||||||||||||||||| | |||||| |||| | |
|
|
| T |
4008825 |
ggaagatacatagtcaattaccttcactccataccaaagcttttctacttggctaaatgacaagtcaaatataacaagattctccgcagaaaacttcttt |
4008924 |
T |
 |
| Q |
161 |
gggaatgattttagaggg |
178 |
Q |
| |
|
|| ||||||||||||||| |
|
|
| T |
4008925 |
ggcaatgattttagaggg |
4008942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 3920817 - 3920775
Alignment:
| Q |
278 |
aggttggtcatcttatcaaatacatgacggcttaactttagct |
320 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3920817 |
aggttggtcatcttatcaaatacatgagggcttaactttagct |
3920775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 4009029 - 4009093
Alignment:
| Q |
256 |
accaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct |
320 |
Q |
| |
|
|||| |||||| |||||| ||||||||||||||||| ||||||||||| |||||||||| |||| |
|
|
| T |
4009029 |
accatgaaaatccaaaaatagcaggttggtcatcttagcaaatacatgagggcttaacttcagct |
4009093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 4017510 - 4017574
Alignment:
| Q |
80 |
acctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctc |
144 |
Q |
| |
|
|||||||||||| ||| |||||||||| | ||||||||||||||||||||||||| || ||||| |
|
|
| T |
4017510 |
acctgcactccatgccagagcttttcaactcgactatatgacaagtccaatataacgagtttctc |
4017574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 3964796 - 3964730
Alignment:
| Q |
78 |
ttacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctc |
144 |
Q |
| |
|
|||||||||||||| ||| || ||||||| | ||||||||||||||||||||||||| || ||||| |
|
|
| T |
3964796 |
ttacctgcactccatgccagagtttttcaactcgactatatgacaagtccaatataacgagtttctc |
3964730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 4217647 - 4217706
Alignment:
| Q |
256 |
accaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactt |
315 |
Q |
| |
|
||||| ||||| |||||| |||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
4217647 |
accaaaaaaattcaaaaatttcaggttggtcatcttagcaaatacatgagggcttaactt |
4217706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 75 - 329
Target Start/End: Original strand, 13396800 - 13397054
Alignment:
| Q |
75 |
caattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgattttag |
174 |
Q |
| |
|
|||||||||| |||||||||||||||||||| | || ||||||| |||| ||| |||||||||||| || |||||| |||||||||||||||||||| |
|
|
| T |
13396800 |
caattacctgtactccacaccaaagcttttctacaaggctatatggcaagcccagtataacaagattatcaacagaaaacttctctgggaatgattttag |
13396899 |
T |
 |
| Q |
175 |
agggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccataccaagaaaatacaaaaac |
274 |
Q |
| |
|
|||| | | |||||| ||||||| ||| | || ||||||| ||||||||||||||||||||| ||| ||||| || ||| || ||||||||||||| |
|
|
| T |
13396900 |
agggtaatgcatccaataaagatatcttagatcagttggaaaaaattgaagcccttgaggaagacgatccaaaccgtctatatcatgaaaatacaaaaat |
13396999 |
T |
 |
| Q |
275 |
cgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattg |
329 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||| |||| ||| |||| |
|
|
| T |
13397000 |
ttcaggttggtcatcttatcaaatacaggcgggcttaacttcagcttcctaattg |
13397054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 27682726 - 27682682
Alignment:
| Q |
11 |
cagagagagctacgggaggaagagaaagaatgagggaagtgttat |
55 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27682726 |
cagagagagctacgggaggaaaagaaagaatgagggaagtgttat |
27682682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 27690045 - 27690003
Alignment:
| Q |
13 |
gagagagctacgggaggaagagaaagaatgagggaagtgttat |
55 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27690045 |
gagagagctacgggaggaaaagaaagaatgagggaagtgttat |
27690003 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 30230240 - 30230282
Alignment:
| Q |
13 |
gagagagctacgggaggaagagaaagaatgagggaagtgttat |
55 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30230240 |
gagagagctacgggaggaaaagaaagaatgagggaagtgttat |
30230282 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 13143892 - 13143937
Alignment:
| Q |
11 |
cagagagagctacgggaggaagagaaag-aatgagggaagtgttat |
55 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| ||||||||| |
|
|
| T |
13143892 |
cagagagagctacgggaggaaaagaaagaaatgaggaaagtgttat |
13143937 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 31712578 - 31712534
Alignment:
| Q |
11 |
cagagagagctacgggaggaagagaaagaatgagggaagtgttat |
55 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
31712578 |
cagagagagctacgggaggaaaagaaagaatgagggaagtgttat |
31712534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 39156533 - 39156577
Alignment:
| Q |
11 |
cagagagagctacgggaggaagagaaagaatgagggaagtgttat |
55 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39156533 |
cagagagagctacgggaggaaaagaaagaatgagggaagtgttat |
39156577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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