View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12878_low_1 (Length: 851)
Name: NF12878_low_1
Description: NF12878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12878_low_1 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 638; Significance: 0; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 638; E-Value: 0
Query Start/End: Original strand, 20 - 833
Target Start/End: Original strand, 37533928 - 37534741
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37533928 |
tcaattgacctatggaataaggaatttcacctgaaaaagcagagaaagagaggaccaagtaccttagaggagtgctccagttggactttggaagttgacc |
37534027 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| | || ||||||| |
|
|
| T |
37534028 |
actaaggttatcattagatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactcagtttctgatagacta |
37534127 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||| ||| ||||||||||||| |
|
|
| T |
37534128 |
agagaaaccaaagaggatgacaaattctttagcattgacaaagagctctctctgatggaagacatgttcacattatccaaataaagttcccttaaattag |
37534227 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37534228 |
tagcattatgaatgagtttcttccaaatgaacgaattgagtttcaatcccacttctgcggaccagtaactgctaagatcaagtgatactaattttgacaa |
37534327 |
T |
|
| Q |
420 |
atgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
519 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37534328 |
atgagagattgtggaaggaatattaccactgaggtcagagtatgatagatttagatgtgtgagtttcactaaatctccaacaccaataggtattgaagac |
37534427 |
T |
|
| Q |
520 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
619 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37534428 |
caagaaaaatgattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
37534527 |
T |
|
| Q |
620 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaag |
719 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37534528 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaaa |
37534627 |
T |
|
| Q |
720 |
agaagaacacgcaaaatagagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaa |
819 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||| | ||||||| |
|
|
| T |
37534628 |
agaagaacgcgcaaaatagagttgagatgaagtgctgacagaaaaagagtttttgaattgtaacaaggcagagttgtcatgtttgttgcacagtgagaaa |
37534727 |
T |
|
| Q |
820 |
gtgtgggtagtaaa |
833 |
Q |
| |
|
|||| || |||||| |
|
|
| T |
37534728 |
gtgtaggaagtaaa |
37534741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 633; E-Value: 0
Query Start/End: Original strand, 20 - 833
Target Start/End: Original strand, 37595152 - 37595971
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
37595152 |
tcaattgacctatggaataaggaatttcacctgaaaaagcagataaacggaggttcaagtaccttagaggagtgctcaagttggactttggaagttgacc |
37595251 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| ||||| | |
|
|
| T |
37595252 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaacccagtgtttcgtagaaga |
37595351 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||||||||| | || |||||||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
37595352 |
agagaaaccaaagaggatgaaaaattctttagcatggacaaagagctctccgtaatggaagacatatccacactattcaaatgaagctcccttaaattag |
37595451 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37595452 |
tagcattatgaatgagtttcttccaaatgaatgacttgagtttcaatcccacttcttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
37595551 |
T |
|
| Q |
420 |
atgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
519 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37595552 |
atgagagattgtggaaggaatattaccactgaggtaacaatatgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
37595651 |
T |
|
| Q |
520 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
619 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37595652 |
tcagaaaaattattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcacctttaagattgttgcaactga |
37595751 |
T |
|
| Q |
620 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaag |
719 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37595752 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaaa |
37595851 |
T |
|
| Q |
720 |
agaagaacacgcaaa------atagagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataat |
813 |
Q |
| |
|
||| ||||| |||| || | |||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||| ||| |
|
|
| T |
37595852 |
agaggaacaaccaaagtacggattgggttgagatgaagtgttgacagaaaaagagtttttgaattgtaacaaggcagagttgtcatgtttgttgcacaat |
37595951 |
T |
|
| Q |
814 |
gagaaagtgtgggtagtaaa |
833 |
Q |
| |
|
|||||||||| || |||||| |
|
|
| T |
37595952 |
gagaaagtgtaggaagtaaa |
37595971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 630; E-Value: 0
Query Start/End: Original strand, 20 - 833
Target Start/End: Original strand, 37640700 - 37641522
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37640700 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggttcaagtaccttagaggagtgctccagttggactttggaagttgacc |
37640799 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| ||| |||||||| |
|
|
| T |
37640800 |
actaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactcagtttttcgtagacta |
37640899 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
37640900 |
agagaaaccaaagaggatgacaaattctttagcattgacaaagagctctccgtaatggaagacatatccacactattcaaatgaagctcccttaaattag |
37640999 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37641000 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
37641099 |
T |
|
| Q |
420 |
atgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37641100 |
atgagagattgtggaaggaatattaccattgaggtaacattttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
37641199 |
T |
|
| Q |
520 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
619 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37641200 |
aaagaaaaattattaaaagccaagttgagttggtgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
37641299 |
T |
|
| Q |
620 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaag |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
37641300 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtattgtttttccaagattctgtcttgaaagaaaa |
37641399 |
T |
|
| Q |
720 |
agaagaac----acgcaaaata-----gagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcat |
810 |
Q |
| |
|
||| | || | ||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
37641400 |
agagggacaactagacaaaatatcgtccggtttagatgaagtgttgacagaaaaagagtttttgaattgtaacaaggcagaggtgtcatgttggttgcac |
37641499 |
T |
|
| Q |
811 |
aatgagaaagtgtgggtagtaaa |
833 |
Q |
| |
|
| ||||||||||| || |||||| |
|
|
| T |
37641500 |
agtgagaaagtgtaggaagtaaa |
37641522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 578; E-Value: 0
Query Start/End: Original strand, 20 - 833
Target Start/End: Original strand, 37712452 - 37713265
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| || |||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37712452 |
tcaattgacctatggaataaggaatttcacctgaaaaagcagaggaagagaggaccaagtaccttagaggagtgctccagttggactttggaagttgacc |
37712551 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
37712552 |
actaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtctcgtagacta |
37712651 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||| ||| ||||||||||||| |
|
|
| T |
37712652 |
agagaaaccaaagaggatgacaaattctttagcattgacaaagagctctctctgatggaagacatgttcacattatccaaataaagttcccttaaattag |
37712751 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
419 |
Q |
| |
|
||||||||||||||||||||||||| | |||| ||| ||||||||| |||| | || |||||||||||||||||||||||||||||||||| |
|
|
| T |
37712752 |
tagcattatgaatgagtttcttccatgtcaatggatttagtttcaattccacatc------cccaaaactgctaagatcaagtgatactaattttgacaa |
37712845 |
T |
|
| Q |
420 |
atgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37712846 |
atgagagattgtggaaggaatattaccattgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
37712945 |
T |
|
| Q |
520 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
619 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37712946 |
caagaaaaatgattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
37713045 |
T |
|
| Q |
620 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaag |
719 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37713046 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttgccaagattctgtcttgaaagaaaa |
37713145 |
T |
|
| Q |
720 |
agaagaacacgcaaa------atagagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataat |
813 |
Q |
| |
|
||| ||||| |||| || | |||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||| | | |
|
|
| T |
37713146 |
agaggaacaaccaaagtacggattgggttgagatgaagtgttgacagaaaaagagtttttgaattgtaacaaggcagagttgtcatgtttgttgcacagt |
37713245 |
T |
|
| Q |
814 |
gagaaagtgtgggtagtaaa |
833 |
Q |
| |
|
||||||||||||| |||||| |
|
|
| T |
37713246 |
gagaaagtgtgggaagtaaa |
37713265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 578; E-Value: 0
Query Start/End: Original strand, 20 - 728
Target Start/End: Original strand, 37824723 - 37825425
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37824723 |
tcaattgacctatggaataaggaatttcacctgaaaaagcagaggaagagaggtccaagtaccttagaggagtgctccagttggactttggaagttgacc |
37824822 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
37824823 |
actaaggttatgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttcgtagacta |
37824922 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||| ||||||| || | |||||| ||||||||||||| |
|
|
| T |
37824923 |
agagaaaccaaagaggatgacaaattctttagcattgacaatgagctctctccgattgaagacatgttcactccattaagatgaagatcccttaaattag |
37825022 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
37825023 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacgtg------ccagtttctgctgagatcaagtgatactaattttgacaa |
37825116 |
T |
|
| Q |
420 |
atgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37825117 |
atgagagattgtggaaggaatattaccattgaggtaacattttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
37825216 |
T |
|
| Q |
520 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37825217 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
37825316 |
T |
|
| Q |
620 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaag |
719 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37825317 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaaa |
37825416 |
T |
|
| Q |
720 |
agaagaaca |
728 |
Q |
| |
|
||| ||||| |
|
|
| T |
37825417 |
agaggaaca |
37825425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 527; E-Value: 0
Query Start/End: Original strand, 20 - 837
Target Start/End: Original strand, 37436535 - 37437346
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37436535 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggttcaagtaccttagaggagtgctccagttggactttggaagttgacc |
37436634 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| || ||||||| |
|
|
| T |
37436635 |
actaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactgagtggatgctagacta |
37436734 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
|||||||||||||| |||||||||||| ||| || | ||||||||||||||| ||||||||||| ||||||| || || |||||||||||||||||||| |
|
|
| T |
37436735 |
agagaaaccaaagaagatgacaaattcgttaacaacgacaaagagctctctccaattgaagacattttcactccattcagatgaagctcccttaaattag |
37436834 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
419 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||| ||| | | || ||| || |||||||||| ||||||||||||||||| |
|
|
| T |
37436835 |
tagcattatgaatgagtttcttccatgcgaatggattgagttccaaa-----------gaatca-taattgttaagatcaagggatactaattttgacaa |
37436922 |
T |
|
| Q |
420 |
atgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
519 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||| | |||||| |||||||||||||||||||||||||| | || ||||||||| ||||||||| |
|
|
| T |
37436923 |
atgagagattttggaaggaatattaccactgaggtcacagtatgataggtttagatgtgtgagtttcactaaatcactaataccaataggtattgaagac |
37437022 |
T |
|
| Q |
520 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
619 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37437023 |
tcagaaaaatgattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcacctttcagattgttgcaactga |
37437122 |
T |
|
| Q |
620 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaag |
719 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37437123 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaaa |
37437222 |
T |
|
| Q |
720 |
agaagaacacgcaaa------atagagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataat |
813 |
Q |
| |
|
||| |||| |||| || | |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37437223 |
agagaaacaaccaaagtacggattgggttgagatgaagtgttgagaagaaaagagtttttgaattgtaataaggcagaggtgtcatgatggttgcataat |
37437322 |
T |
|
| Q |
814 |
gagaaagtgtgggtagtaaagtga |
837 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
37437323 |
gagaaagtgtgggtagtaaagtga |
37437346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 525; E-Value: 0
Query Start/End: Original strand, 20 - 817
Target Start/End: Original strand, 37697615 - 37698418
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37697615 |
tcaattgacctatggaataaggaatttcacctgagaaagcagtgtaagagaggtctaagtaccttagaggagtgctccagttggactttggaagttgacc |
37697714 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
37697715 |
actaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttcgtagacta |
37697814 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||| ||||||| || | |||||| ||||||||||||| |
|
|
| T |
37697815 |
agagaaaccaaagaggatgacaaattctttagcattgacaatgagctctctccgattgaagacatgttcactccattaagatgaagatcccttaaattag |
37697914 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37697915 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcgtaccagtaactgctaagatcaagtgatactaattttgacaa |
37698014 |
T |
|
| Q |
420 |
atgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
37698015 |
atgagagattgtggaaggaatattaccattgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccgacaccaataggtattgaagac |
37698114 |
T |
|
| Q |
520 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
619 |
Q |
| |
|
||||||||| |||||||||||| || |||||||||||| || ||||||| ||||| |||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
37698115 |
caagaaaaattattaaaagccaaattaagttgttgaaggcgtctaagctggaagatagtgctattgggatgtaattcacctttcaaattgttgcaactga |
37698214 |
T |
|
| Q |
620 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaag |
719 |
Q |
| |
|
|||||| ||||||||||| ||| ||| ||||| ||||||||||||||||||| |||||||||||| |||||| ||||||||||||| || |||||| |
|
|
| T |
37698215 |
ggtccaaaccaatcacgtaatccgactcagtgtcacacgtgacaccatcccacttgcaacaatctgtattgtttttccaagattctgtcctggaagaaaa |
37698314 |
T |
|
| Q |
720 |
agaagaac------acgcaaaatagagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataat |
813 |
Q |
| |
|
||| |||| || || || ||||||| |||||||| || ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
37698315 |
agaggaacatctagaccaaatatcaggttgagacgaagtgttaactgaaaatgagtttttgaattgtaacaaggcagaactgtcatgatggttgcataat |
37698414 |
T |
|
| Q |
814 |
gaga |
817 |
Q |
| |
|
|||| |
|
|
| T |
37698415 |
gaga |
37698418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 20 - 728
Target Start/End: Complemental strand, 37400144 - 37399451
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||| |||||||| || |||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37400144 |
tcaattggcctatggaatagggaatttcacctgaaaaagcagaggaagagaggaccaagtaccttagaggagtgctccagttggactttggaagttgacc |
37400045 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| | || ||||||| |
|
|
| T |
37400044 |
actaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactcagtttctgatagacta |
37399945 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||| |
|
|
| T |
37399944 |
agagaaaccaaagaggatgacaaattctttagcattgacaaagagctctctctgagggaagacatgttcacaatattcaaatgaagctcccttaaattag |
37399845 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
419 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||| ||| ||||| ||| | |||||||||||||||||||||||||||||| |
|
|
| T |
37399844 |
tagcattatgaatgagtttcttccatgtcaatgaat-------caa--------gttcgacaaagttaaagctaagatcaagtgatactaattttgacaa |
37399760 |
T |
|
| Q |
420 |
atgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37399759 |
atgagagattgtggaaggaatattaccattgaggttacaatatgatgtatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
37399660 |
T |
|
| Q |
520 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
619 |
Q |
| |
|
|||||||| |||||||||||| || ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37399659 |
ccagaaaaattattaaaagccaaattaagttgttgaaggtgtctaagctgaaagatgatgctattgggatgtaattcaccttttagtttgttgcaactga |
37399560 |
T |
|
| Q |
620 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaag |
719 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37399559 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaaa |
37399460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 20 - 833
Target Start/End: Original strand, 37703496 - 37704309
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| || ||||| |||||| ||||||| || |||||||||||| |||||||||||||| |
|
|
| T |
37703496 |
tcaattgacctatggaataaggaatttcacctgaaaaagcagaggaagagaggttcaagtatcttagaggagagctccagttggattttggaagttgacc |
37703595 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| | || ||||||| |
|
|
| T |
37703596 |
actaaggttataattgaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactcagtttctgatagacta |
37703695 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||||| | || |||||||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
37703696 |
agagaaaccaaagaggatgacaaattctttagcattgacaatgagctctccgtaatggaagacatatccacactattcaaatgaagctcccttaaattag |
37703795 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttc--ggaccagtaactgctaagatcaagtgatactaattttgac |
417 |
Q |
| |
|
||||||||||||||||||||||||| | || | ||| | || || ||||| | | | |||||||||||||||||||||| |||||||||| |
|
|
| T |
37703796 |
tagcattatgaatgagtttcttccatgtcaacggattaatttcca--------tgttcgagtaactataactgctaagatcaagtgatattaattttgac |
37703887 |
T |
|
| Q |
418 |
aaatgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaag |
517 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||| |||| ||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
37703888 |
aaatgagagattgtggagggagtattacccttgaggtgacaaaatgataaatttagatgtgtgagattcactaaatcgccaataccaataggcattgaag |
37703987 |
T |
|
| Q |
518 |
acaaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaact |
617 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||||||||| |||||| |||| |||||||| || |||||||||||||| |||||||||||||| |
|
|
| T |
37703988 |
atccagaaaaatgattaaaagccaagttgagttgttgaaggtgtctaagcttgtagattgtgctattaggttgtaattcacctttcagattgttgcaact |
37704087 |
T |
|
| Q |
618 |
gaggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaa |
717 |
Q |
| |
|
||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| | | ||| ||||||||||||||| |||||| |
|
|
| T |
37704088 |
gagatccaaaccaatcacgtgatcagacacggtgtcgcacgtgacaccatcccactcgcaacaatctgtgccggttttccaagattctgtcttaaaagaa |
37704187 |
T |
|
| Q |
718 |
agagaagaac------acgcaaaatagagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcata |
811 |
Q |
| |
|
| ||| ||| || |||| | ||| ||||||||||||||||||||| |||| ||| |||||||| ||||| ||| | ||||| ||| |||| | |
|
|
| T |
37704188 |
aaagacaaacacatagacagaaaaccgggtttagatgaagtgttgacagaaaatgagtgtttgaattgtaacaaggcggagctatcatgttggctgcaca |
37704287 |
T |
|
| Q |
812 |
atgagaaagtgtgggtagtaaa |
833 |
Q |
| |
|
|||||||||||| || |||||| |
|
|
| T |
37704288 |
atgagaaagtgtaggaagtaaa |
37704309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 70 - 729
Target Start/End: Complemental strand, 37392240 - 37391584
Alignment:
| Q |
70 |
aggtacaagtaccttagagaagtgctccagttggactttggaagttgaccactaaggttatcattaaatgacaaatccaatctttgaagattaggtaaag |
169 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| || |||||||||| ||| ||||| | || ||| ||||||||| | |||||||||||||||||||| |
|
|
| T |
37392240 |
aggtccaagtaccttagaggagtgctccagtttgattttggaagtttaccgctaagttcattatt---tgacaaatctagtctttgaagattaggtaaag |
37392144 |
T |
|
| Q |
170 |
agaggatgtcacttgatatatttccttgcaacacagtgtttggtagactaagagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctc |
269 |
Q |
| |
|
|||||||| ||||||| | ||||||||||||| || | | | ||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
37392143 |
agaggatggcacttgacaaatttccttgcaacccaatttctcctagcctaagagaaaccaaagaggatgacacattctttagcatagacaaagagctctc |
37392044 |
T |
|
| Q |
270 |
tctgattgaagacatattcactctatccaaatgaagctcccttaaattagtagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatccc |
369 |
Q |
| |
|
||| || ||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||| || ||||| | | |
|
|
| T |
37392043 |
tctaatggaatacatatccactctattcaaatgaagctcccttaaattagtagcattatgaatgagtttcttccatgtcaatgtatcaagtttgagttg- |
37391945 |
T |
|
| Q |
370 |
acttgttcgga---ccagtaactgctaagatcaagtgatactaattttgacaaatgagagattgtggaaggaatattaccactgaggtaacaatttgata |
466 |
Q |
| |
|
|||||| | || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37391944 |
--ttgttccaagtgccggtaattgctaagatcaagtgatactaattttgacaaatgagagattgtggagggaatattaccactgaggtaacaatttgata |
37391847 |
T |
|
| Q |
467 |
gatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagacaaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaag |
566 |
Q |
| |
|
||||||||| |||||| ||||||||||| |||| ||||| | ||| ||||||| | ||||| ||| |||| |||||||||||||||||||||| |||| |
|
|
| T |
37391846 |
gatttagatatgtgagattcactaaatcaccaataccaacatgcaatgaagacccaaaaaaaaaatttaaagacaagttgagttgttgaaggtgtctaag |
37391747 |
T |
|
| Q |
567 |
ctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactgaggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacacca |
666 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| || | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37391746 |
ctgaaagatagtgctattgggatgtaaatcaccattcaaattgttgcaactgaggtctagttcaatcacgtgatctgacatggtgtcgcacgtgacacca |
37391647 |
T |
|
| Q |
667 |
tcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaagagaagaacac |
729 |
Q |
| |
|
||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||| |||||| |
|
|
| T |
37391646 |
tcccacttgcaacaatttgtactgtttttccaagattctgtcttgaaagaaaaagaggaacac |
37391584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 28 - 833
Target Start/End: Complemental strand, 37381659 - 37380842
Alignment:
| Q |
28 |
cctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgaccactaaggt |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | ||||| ||||||||| | || ||||||||||||||| || |||||||||| || || | |
|
|
| T |
37381659 |
cctatggaataaggaatttcacctgagaaaggggtgcgagagaggtccaagtacctcaaaggagtgctccagttggatttcggaagttgactgctcagat |
37381560 |
T |
|
| Q |
128 |
tatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagactaagagaaac |
227 |
Q |
| |
|
| |||| |||| ||||| | | |||| ||||||||||||||||||||||||||||| | ||||||||||||| |||| | | ||||| ||||||||| |
|
|
| T |
37381559 |
atttattagatgataaatctagtgtttggagattaggtaaagagaggatgtcacttgacaaatttccttgcaacccagtttctcctagaccaagagaaac |
37381460 |
T |
|
| Q |
228 |
caaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattagtagcatta |
327 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||| |||| || || ||||| ||||| | | | ||| ||||||||||||||||||||||||| |
|
|
| T |
37381459 |
caaagaggatgacaaattctttagcatagataaagagctcgctctaatagaggacatgttcacacaacctaaagaaagctcccttaaattagtagcatta |
37381360 |
T |
|
| Q |
328 |
tgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaaatgagaga |
427 |
Q |
| |
|
||||||||||||||||| | |||| ||||||||||||||||| || | |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
37381359 |
tgaatgagtttcttccatgtcaatggattgagtttcaatcccatatgccaatcataataactgctgagatcaagtgatactaattttgacaaatgagaga |
37381260 |
T |
|
| Q |
428 |
ttgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagacaaagaaaa |
527 |
Q |
| |
|
||||||| ||||||||||||| |||| |||| | ||||||||||||||||||||| ||||||||||| ||| || || | ||| | ||||| |||||| |
|
|
| T |
37381259 |
ttgtggagggaatattaccaccgagggaacagtgtgatagatttagatgtgtgagattcactaaatcatcaatactaacatgcaataaagacccagaaaa |
37381160 |
T |
|
| Q |
528 |
atcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactgaggtccaga |
627 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||| || |||||| ||||||||||||||||| |
|
|
| T |
37381159 |
attattaaaagccaagttgagttgttgaaggtgtctaagctggaagattgtgctattgggatgtaattcaccattcagattgctgcaactgaggtccaga |
37381060 |
T |
|
| Q |
628 |
ccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaagagaagaac |
727 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| | |||| |||||||||| |||||||||||| || |||| |
|
|
| T |
37381059 |
ccaatcacatgatctgacatggagtcgcacgtgacaccatcccacccacaacaatctgtattatttttccaagattctatcttgaaagaaaaagtggaac |
37380960 |
T |
|
| Q |
728 |
----acgcaaa--------atagagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatga |
815 |
Q |
| |
|
| || || || | || ||||||||||||| |||||| |||||||| || ||||| |||||||| || ||||| |||||||| ||||| |
|
|
| T |
37380959 |
atctaggccaaaaatgtatatcggatttcgatgaagtgttgaaagaaaatgagtttttgaaatgtaacaaggcagatgtatcatgttggttgcacaatga |
37380860 |
T |
|
| Q |
816 |
gaaagtgtgggtagtaaa |
833 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
37380859 |
gaaagtgtgggaagtaaa |
37380842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 69 - 809
Target Start/End: Original strand, 37429618 - 37430374
Alignment:
| Q |
69 |
gaggtacaagtaccttagagaagtgctccagttggactttggaagttgaccactaaggttatcattaaatgacaaatccaatctttgaagattaggtaaa |
168 |
Q |
| |
|
||||| |||||||||||| | |||||||||||||||| |||||||| |||||||||| |||||||| |||||||| | | ||||||||| |||||| |
|
|
| T |
37429618 |
gaggtccaagtaccttaggggagtgctccagttggacagtggaagtttcccactaaggtcctcattaaaagacaaatctagttcttgaagatttggtaaa |
37429717 |
T |
|
| Q |
169 |
gagaggatgtcacttgat----atatttccttgcaacacagtgtttggtagactaagagaaaccaaagaggatgacaaattctttagcatcaacaaagag |
264 |
Q |
| |
|
|||||||||||||| | | | |||| ||||||| ||||| ||| |||| ||||| ||||||||||| || |||||| |||||| | ||||||| |
|
|
| T |
37429718 |
gagaggatgtcactagcttggaaaattttcttgcaagccagtgattgatagatcaagagcgaccaaagaggacgataaattccttagcagcgacaaagat |
37429817 |
T |
|
| Q |
265 |
ctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattagtagcattatgaatgagtttcttccaaatgaatgaa------ttga |
358 |
Q |
| |
|
|||||||||||| |||| |||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||| || | | || |
|
|
| T |
37429818 |
ctctctctgattaaagatatatccacagtattcaaatgaagctcccttaaattagtagcattaagaatgagtttcttccatgtgagtggaccaagttcga |
37429917 |
T |
|
| Q |
359 |
gtttcaatcccacttgttc--ggaccagtaactgctaagatcaagtgatactaattttgacaaatgagagattgtggaaggaatattaccactgaggtaa |
456 |
Q |
| |
|
||||| | ||| ||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | | |
|
|
| T |
37429918 |
gtttctgttcca--tgttccagtaactataactgctaagatcaagtgatactaattttgacaaatgagagattgtggaggaaatattaccactaatgccg |
37430015 |
T |
|
| Q |
457 |
caatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagacaaagaaaaatcattaaaagccaagttgagttgttgaa |
556 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||| |||| |||| | ||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
37430016 |
gtgtttgatagatttagatgtgtgagcttcactagatcaccaataccagcatgcaccgaagacccgaaaaaatcattaaaagccaagttgagttgttgaa |
37430115 |
T |
|
| Q |
557 |
ggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactgaggtccagaccaatcacgtgatctgacatggtgtcgca |
656 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||||||| | ||| ||||| ||||||| |
|
|
| T |
37430116 |
ggtgtttaagttgaaagatggtgctattggccgctaattcaccgttcagattgttgcaactaaggtccagaccaatcacataatcgtacatgatgtcgca |
37430215 |
T |
|
| Q |
657 |
cgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaagagaagaaca------cgcaaaatagagttgagatgaa |
750 |
Q |
| |
|
|||||||||||||||||| || |||||||| | | ||| ||||||||||||||||||||||| ||| ||||| | |||| ||||||||||| |
|
|
| T |
37430216 |
cgtgacaccatcccactcgcagcaatctgtgccggttttccaagattctgtcttgaaagaaaaagaggaacagtgagaccaaaaaccaggttgagatgaa |
37430315 |
T |
|
| Q |
751 |
gtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgca |
809 |
Q |
| |
|
||||||| | |||| || || || |||||||| |||||||| |||||||||| ||||| |
|
|
| T |
37430316 |
gtgttgataaaaaatgaattcttgaattgtaacaaggcagaactgtcatgatgcttgca |
37430374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 162 - 728
Target Start/End: Complemental strand, 37412504 - 37411939
Alignment:
| Q |
162 |
aggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagactaagagaaaccaaagaggatgacaaattctttagcatcaacaaa |
261 |
Q |
| |
|
|||||||||| | |||||||||| || |||||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| |
|
|
| T |
37412504 |
aggtaaagagggaatgtcacttgctaaatttccttgcaaactagtgttccctagactaagagagaccagagaggatgacaaattctttagcagcgacaaa |
37412405 |
T |
|
| Q |
262 |
gagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattagtagcattatgaatgagtttcttccaaatgaatgaattgagtt |
361 |
Q |
| |
|
|| |||||||||| |||||||||| || |||| || ||||||||| |||||||| ||| ||||||||||||||| |||||| |||| | || |||| |
|
|
| T |
37412404 |
gaattctctctgatggaagacatatcaacactattcagatgaagctcgcttaaatttgtaacattatgaatgagttccttccatgtgaagggatcaagtt |
37412305 |
T |
|
| Q |
362 |
tcaatcccacttgttc---ggaccagtaactgctaagatcaagtgatactaattttgacaaatgagagattgtggaaggaatattaccactgaggtaaca |
458 |
Q |
| |
|
| | | ||| || | | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||| | |
|
|
| T |
37412304 |
tgagttt---ttgatccatgtatcagttactgctaagatcaagtgatactaattttgacaagtgagagattgtggaaggaatattacaaatgattccagt |
37412208 |
T |
|
| Q |
459 |
atttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagacaaagaaaaatcattaaaagccaagttgagttgttgaagg |
558 |
Q |
| |
|
||||||| ||| ||||||||||| ||||| ||||| | || | || | ||| |||||| |||||||||||||||||| ||||||| |||||||| |
|
|
| T |
37412207 |
gtttgataaattaagatgtgtgagattcaccaaatcactaatatcatcatgcaccgaagacctgaaaaaatcattaaaagcca-gttgagtcgttgaagg |
37412109 |
T |
|
| Q |
559 |
tgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactgaggtccagaccaatcacgtgatctgacatggtgtcgcacg |
658 |
Q |
| |
|
|||||||| | ||||| ||||||||| |||||||||||||||| ||||||||||| || ||||||| ||||||||| ||||| | | |||||||||| |
|
|
| T |
37412108 |
tgtttaagtttgaagatagtgctattgagatgtaattcacctttaagattgttgcacctaaggtccaaaccaatcacatgatccaaaacggtgtcgcaca |
37412009 |
T |
|
| Q |
659 |
tgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaagagaagaaca |
728 |
Q |
| |
|
||||||||| |||||| |||||||||||| | |||| |||||| ||||| || ||||||| ||| ||||| |
|
|
| T |
37412008 |
tgacaccataccactcgcaacaatctgtattatttttccaagaatctgttttcaaagaaaaagaggaaca |
37411939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 744 - 833
Target Start/End: Original strand, 37825465 - 37825554
Alignment:
| Q |
744 |
agatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaa |
833 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||| | ||||||||||| || |||||| |
|
|
| T |
37825465 |
agatgaagtgttgacagaaaaagagtttttgaattgtaacaaggcagagttgtcatgtttgttgcacagtgagaaagtgtaggaagtaaa |
37825554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 37412608 - 37412513
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagtt |
115 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| || |||| ||| | |||||||||||||| ||||||||||||| || ||||||||| |
|
|
| T |
37412608 |
tcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaagtt |
37412513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 745 - 823
Target Start/End: Complemental strand, 37399410 - 37399332
Alignment:
| Q |
745 |
gatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgt |
823 |
Q |
| |
|
|||||||||| ||| |||| || ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37399410 |
gatgaagtgtcaacaaaaaatgaatttttgaattgtaacaaggcagaggtgtcatgatggttgcatagtgagaaagtgt |
37399332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 745 - 817
Target Start/End: Complemental strand, 37391548 - 37391476
Alignment:
| Q |
745 |
gatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgaga |
817 |
Q |
| |
|
||||||||||||||| |||| |||||||| ||||||| ||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
37391548 |
gatgaagtgttgacaaaaaatgagtttttgaattgtagcaaggcagagctatcatgaaggttgcacaatgaga |
37391476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 821
Target Start/End: Original strand, 37441499 - 37441573
Alignment:
| Q |
745 |
gatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagt |
821 |
Q |
| |
|
|||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| | ||| || | ||||||||| |
|
|
| T |
37441499 |
gatgaagtgttgactgaaa--gagtttttgaattgtaacaaggcagaggtgtcatgtttgtttcacagtgagaaagt |
37441573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 775 - 833
Target Start/End: Complemental strand, 37411883 - 37411825
Alignment:
| Q |
775 |
aattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgtgggtagtaaa |
833 |
Q |
| |
|
|||||||| |||||| || ||||||||| ||||||||||||||| |||| || |||||| |
|
|
| T |
37411883 |
aattgtaacaaggcaaagctgtcatgatagttgcataatgagaaggtgtaggaagtaaa |
37411825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 378; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 22 - 837
Target Start/End: Complemental strand, 16842206 - 16841394
Alignment:
| Q |
22 |
aattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgaccac |
121 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||||||||| | |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
16842206 |
aattgacctatggaataggagatttctcctgagaaagcagtatgagagaggtacaagtaccttagaggagtgctccagttggattttggaagttgaccac |
16842107 |
T |
|
| Q |
122 |
taaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagactaag |
221 |
Q |
| |
|
|||||| | |||| ||||||||| | |||||||||||| | |||||||| ||||||||| | | |||||||||||| ||||||||| |||| ||| |
|
|
| T |
16842106 |
taaggtcttgattatgtgacaaatctagtctttgaagatttgacaaagagagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaag |
16842007 |
T |
|
| Q |
222 |
agaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattagta |
321 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||| || | || ||| |||||||| |||||| |
|
|
| T |
16842006 |
agaaaccaaagaggatgacaaattgtttagcattgacaaagagctctctccaattgaagacatgttcactccatttagataaagatcccttaatttagta |
16841907 |
T |
|
| Q |
322 |
gcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaaat |
421 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| || |||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
16841906 |
gcattatgaatgagtttcttccaagtgaacgaattgagtttcaatcccactttttcgtacgagtaaccgctaagatcaagagatactaattttgacaaat |
16841807 |
T |
|
| Q |
422 |
gagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagacaa |
521 |
Q |
| |
|
||||||||||||| |||| | |||| |||||| ||| | |||||||||||||||||||| ||||||||||| | || ||||||||||||||||||| |
|
|
| T |
16841806 |
gagagattgtggagtgaatgtcaccattgaggtcacagtatgatagatttagatgtgtgatattcactaaatcgctaataccaataggcattgaagaccc |
16841707 |
T |
|
| Q |
522 |
agaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactgagg |
621 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| | | ||| | ||| |||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
16841706 |
agaaaaattattaaaagccaagttgagttgttgaaggtgtcttaactggaggatagtgctattgggatgtaattcacctttcaaattgttgcaactgagg |
16841607 |
T |
|
| Q |
622 |
tccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaagag |
721 |
Q |
| |
|
|||| ||||| ||||| |||||| ||||| ||||||||||||||||||| |||||||| |||| ||||| |||||||| ||||||||||||| || |
|
|
| T |
16841606 |
tccaaaccaaccacgtaatctgattcagtgtcacacgtgacaccatcccacttgcaacaatccgtaccgtttttccaagattttgtcttgaaagaagtag |
16841507 |
T |
|
| Q |
722 |
aagaacacgcaaaatagagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagt |
821 |
Q |
| |
|
| ||||| || || |||||||||||||||||||||||||| |||||||| || ||||| || |||||| ||||||| |||||||| ||||| ||||| |
|
|
| T |
16841506 |
aggaaca---aatatcaagttgagatgaagtgttgacagaaaatgagtttttgaaatgtaacaaagcagagctgtcatgttggttgcagaatgacaaagt |
16841410 |
T |
|
| Q |
822 |
gtgggtagtaaagtga |
837 |
Q |
| |
|
||| | |||||||||| |
|
|
| T |
16841409 |
gtgtgaagtaaagtga |
16841394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 42 - 823
Target Start/End: Complemental strand, 24217050 - 24216266
Alignment:
| Q |
42 |
aatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgaccactaaggttatcattaaatgac |
141 |
Q |
| |
|
|||||||||||||||| |||| ||| ||||| |||||||||||| | |||||||||||||||| |||||| || ||||| ||||| | ||| ||||| |
|
|
| T |
24217050 |
aatttcacctgagaaaccagagaaagagaggtccaagtaccttaggggagtgctccagttggacgttggaaatttaccacgaaggtcttgattcgatgac |
24216951 |
T |
|
| Q |
142 |
aaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagactaagagaaaccaaagaggatgaca |
241 |
Q |
| |
|
||||| | | |||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
24216950 |
aaatctagtttttgaagatttggtaaagagaggatgtcacttgacatatttccttgcaatccagtggatgctagactaagagaaaccaaagaggatgaca |
24216851 |
T |
|
| Q |
242 |
aattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattagtagcattatgaatgagtttctt |
341 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| || | ||||| || || | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24216850 |
aattctttagca------aagagctctctctgattgaagatatgtccactccattcaggtaaagctcccttaaattagtagcattatgaatgagtttctt |
24216757 |
T |
|
| Q |
342 |
ccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaa---ctgctaagatcaagtgatactaattttgacaaatgagagattgtggaagga |
438 |
Q |
| |
|
||| |||| ||||||||| | | || | | ||||||| || ||||||||||||| |||| ||||||||| |||||||||||||| ||| |
|
|
| T |
24216756 |
ccatgtgaagatattgagtttgagtttttgttccaccggccagtaataacttttaagatcaagtgacactagttttgacaactgagagattgtggaggga |
24216657 |
T |
|
| Q |
439 |
atattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagacaaagaaaaatcattaaaag |
538 |
Q |
| |
|
||||||||| | |||||||| |||||| |||||||| |||||| ||||||| ||| |||| |||| | ||||||||||| ||||||||| |||||| | |
|
|
| T |
24216656 |
atattaccagtaaggtaacagcttgataaatttagatatgtgagattcactagatcaccaatcccaacatgcattgaagaccaagaaaaattattaaagg |
24216557 |
T |
|
| Q |
539 |
ccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactgaggtccagaccaatcacgtg |
638 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
24216556 |
ccaagttgagttgttgaaggtgtctaagcttgaagatagtgcaatttggatgtaactcacctttcagattgttgcaactaaggtccagaccaatcacgta |
24216457 |
T |
|
| Q |
639 |
atctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaagagaagaacac-----gcaa |
733 |
Q |
| |
|
|| |||| | ||||| ||| |||| ||||||||||| |||||||||| || |||| ||| ||||| ||| ||||| ||| || |||||| ||| |
|
|
| T |
24216456 |
atttgacctagtgtcacacatgaccccatcccactcgcaacaatctgcaccatttttccaggattccgtcctgaaataaaaagtggaacacatagaccaa |
24216357 |
T |
|
| Q |
734 |
a-atagagttgagatgaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagtgt |
823 |
Q |
| |
|
| || | ||| |||||||||||||||| ||| ||||| || |||||||| || ||||| |||||||||||||||| |||||| |||||| |
|
|
| T |
24216356 |
atatcgggttcagatgaagtgttgacaacaaatgagttcttgaattgtaacaatgcagaactgtcatgatggttgcagaatgagtaagtgt |
24216266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 362; Significance: 0; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 20 - 718
Target Start/End: Original strand, 14553866 - 14554552
Alignment:
| Q |
20 |
tcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggtacaagtaccttagagaagtgctccagttggactttggaagttgacc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||| ||||||||||| |||||||||||||| |
|
|
| T |
14553866 |
tcaattgacctatggaataaggaatttcacctgagaaagcagagtaatggaggtacaagtaccttagaggagtactccagttggattttggaagttgacc |
14553965 |
T |
|
| Q |
120 |
actaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttggtagacta |
219 |
Q |
| |
|
|||||| ||||||| | |||||| | | |||||||||| || |||||||| ||||||||||| | ||||||||||||| | ||||||| ||||||| |
|
|
| T |
14553966 |
actaagaccatcattacctaccaaatctagtttttgaagatttggcaaagagagtatgtcacttgacaaatttccttgcaacccggtgtttgctagacta |
14554065 |
T |
|
| Q |
220 |
agagaaaccaaagaggatgacaaattctttagcatcaacaaagagctctctctgattgaagacatattcactctatccaaatgaagctcccttaaattag |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| || || || ||| ||||||||||||| |
|
|
| T |
14554066 |
agagaaaccaaagaggatgacaaattctttagcattgacaaagagctctctctgatggaagacatgttcactccattcagataaagatcccttaaattag |
14554165 |
T |
|
| Q |
320 |
tagcattatgaatgagtttcttccaaatgaatgaattgagtttcaatcccacttgttcggaccagtaactgctaagatcaagtgatactaattttgacaa |
419 |
Q |
| |
|
||||||||||||||||||| ||||| | |||| ||| | || ||| | |||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
14554166 |
tagcattatgaatgagtttattccatgtaaatggattaatttccaa------------gaaccagttaatgctaagatcaagtgatactaattttgacaa |
14554253 |
T |
|
| Q |
420 |
atgagagattgtggaaggaatattaccactgaggtaacaatttgatagatttagatgtgtgagtttcactaaatctccaacaccaataggcattgaagac |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||||||||| |||| ||||| ||||||||||||| |
|
|
| T |
14554254 |
atgagagattgtggaaggaatattaccactaaggtaacaattggatatatttagatgcatgagtttcactaaatcgccaataccaagaggcattgaagac |
14554353 |
T |
|
| Q |
520 |
aaagaaaaatcattaaaagccaagttgagttgttgaaggtgtttaagctgaaagatggtgctattgggatgtaattcaccttttagattgttgcaactga |
619 |
Q |
| |
|
| ||| |||||||||||| | ||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||| || | |||||||||||| | |
|
|
| T |
14554354 |
ccaaaaatatcattaaaagctaggttgagttgttgaaggtgtctaagctggaagatagtgctattaggatgtaattcaccattcaaattgttgcaactaa |
14554453 |
T |
|
| Q |
620 |
ggtccagaccaatcacgtgatctgacatggtgtcgcacgtgacaccatcccactcacaacaatctgtactgttttcccaagattctgtcttgaaagaaa |
718 |
Q |
| |
|
|||| || ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
14554454 |
ggtctagttcaatcacgtgacctgatatggtgtcgcacgtgacaccatcccactcgcaacaatctgtactctttttccaagattctgtcttgaaagaaa |
14554552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 748 - 821
Target Start/End: Original strand, 14554615 - 14554688
Alignment:
| Q |
748 |
gaagtgttgacagaaaaagagtttttaaattgtaataaggcagaggtgtcatgatggttgcataatgagaaagt |
821 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
14554615 |
gaagtgttgacagaaaaagagtttttgaattgtaacaaggcagaggtgtcatgttggttgcacaatgagaaagt |
14554688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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