View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12879_low_1 (Length: 802)

Name: NF12879_low_1
Description: NF12879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12879_low_1
NF12879_low_1
[»] chr3 (16 HSPs)
chr3 (152-787)||(5374743-5375381)
chr3 (152-730)||(5356388-5356968)
chr3 (159-727)||(5369064-5369636)
chr3 (503-787)||(5362973-5363260)
chr3 (503-787)||(5368189-5368476)
chr3 (152-463)||(5363276-5363579)
chr3 (16-61)||(5375472-5375517)
chr3 (342-407)||(7178902-7178967)
chr3 (340-407)||(7127014-7127081)
chr3 (174-236)||(7179028-7179090)
chr3 (175-236)||(8399989-8400055)
chr3 (16-61)||(5363668-5363713)
chr3 (423-460)||(5368495-5368532)
chr3 (323-408)||(7119802-7119887)
chr3 (196-237)||(7119982-7120023)
chr3 (512-573)||(7126688-7126749)
[»] chr6 (4 HSPs)
chr6 (512-579)||(33839541-33839608)
chr6 (194-237)||(33839161-33839204)
chr6 (186-236)||(7174411-7174461)
chr6 (194-235)||(33843077-33843118)
[»] chr8 (2 HSPs)
chr8 (318-407)||(30054329-30054420)
chr8 (508-597)||(30054498-30054587)
[»] chr7 (1 HSPs)
chr7 (512-577)||(44500709-44500774)
[»] chr4 (2 HSPs)
chr4 (512-573)||(36590659-36590720)
chr4 (189-237)||(36590356-36590404)
[»] chr5 (1 HSPs)
chr5 (196-237)||(28092141-28092182)


Alignment Details
Target: chr3 (Bit Score: 569; Significance: 0; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 152 - 787
Target Start/End: Complemental strand, 5375381 - 5374743
Alignment:
Q  152 tttcaccttaatcatcattatctatgatggtaatctttgctaacggtgagttttgaagcaaaaattccactactccatcaggtatgaatttagctttaat 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5375381 tttcaccttaatcatcattatctatgatggtaatctttgctaacggtgagttttgaagcaaaaattccactactccatcaggtatgaatttagctttaat 5375282  T
Q  252 taactgaattccggcaccttctttcttgaacttgcgacatctcagtatcatgtataatccaggtgtaagcggtttcatttctacttgtagtgactccagg 351  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5375281 taactgaattctggcaccttctttcttgaacttgcgacatctcagtatcatgtataatccaggtgtaagcggtttcatttctacttgtagtgactccagg 5375182  T
Q  352 ttacacaaggaattgagtttaaccttgatcaaatcaggaacaaaggagagaacctaacgaaggaaagaaggatagttatatattttagacaaaatttata 451  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5375181 ttacacaaggaattgagtttaaccttgatcaaatcaggaacaaaggagagaacctatcgaaggaaagaaggatagttatatattttagacaaaatttata 5375082  T
Q  452 tataaagaaacggaaaatacaagcaattgaagaacaaaatataaatatatcggcctcaaaacctgaagagtattagaagagactgttaatgatttgatat 551  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5375081 tataaagaaacgaaaaatacaagcaattgaagaacaaaatataaatatatcggcctcaaaacctgaagagtattagaagagactgttaatgatttgatat 5374982  T
Q  552 tagcaagctctagcagccagctgaatagggttgcagaatcctcttcgacccatctgatgtcttctacatcaatgtataagtgtgtaatagaacaaggatg 651  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5374981 tagcaagctctagcagccagctgaatagggttgcagaatcctcttcgacccatctgatgtcttctacatcaatgtataagtgtgtaatagaacaaggatg 5374882  T
Q  652 gctcacacatagtttttgattcggagtaccagtaaaagcaaagttagaaagacacggagcagataacttgagtttgcgtccgta---gctataaagatag 748  Q
    ||||||||||||| ||||||||||||| ||||||||||||||  |||||||| |||||||||||||| ||| ||||| |  |||   | |||||||||||    
T  5374881 gctcacacatagtgtttgattcggagtgccagtaaaagcaaatgtagaaagatacggagcagataacatgattttgcttttgtagttgttataaagatag 5374782  T
Q  749 tatccatatatagttaagttgacaagcgttgtatttgat 787  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5374781 tatccatatatagttaagttgacaagcgttgtatttgat 5374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 152 - 730
Target Start/End: Complemental strand, 5356968 - 5356388
Alignment:
Q  152 tttcaccttaatcatcattatctatgatggtaatctttgctaacggtgagttttgaagcaaaaattccactactccatcaggtatgaatttagctttaat 251  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||  |    
T  5356968 tttcaccttaatcatcattatctataatgttaatctttgctaacggtgagttttgaagcaaaaattccactactccataaggtatgaatttatctttctt 5356869  T
Q  252 taactgaattccggcaccttctttcttgaacttgcgacatctcagtatcatgtataatccaggtgtaagcggtttcatttctacttgtagtgactccagg 351  Q
     ||  |||||||||||| |  |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5356868 caaacgaattccggcacgtgttttcttgaacttgcgaaaactcagtatcttgtataatccaggtgtaagcggtttcatttctacttgtagtgactccaag 5356769  T
Q  352 ttacacaaggaattgagtttaaccttgatcaaatcaggaacaaaggagagaacctaacgaaggaaagaaggatagttatatattttagacaaaatttata 451  Q
    |||||||||||| | |||||||||||||  ||||||||||||| |  |||||||||  ||| |||| | |||  ||   | |||||||| |||||||| |    
T  5356768 ttacacaaggaagttagtttaaccttgaaaaaatcaggaacaatg--gagaacctattgaatgaaatatggacggtccgacattttagaaaaaatttaga 5356671  T
Q  452 tataaagaaacggaaaatacaagcaattgaagaac----aaaatataaatatatcggcctcaaaacctgaagagtattagaagagactgttaatgatttg 547  Q
     |||||  ||||  |||| ||||||| | ||||||     | ||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||     
T  5356670 aataaa-taacg--aaatgcaagcaactaaagaaccgcacatatataaatatagcagcctcaaaacctgaagagtattagaagagactgtcaatgatttt 5356574  T
Q  548 atattagcaagctctagcagccagctgaatagggttgcagaatcctcttcgacccatc---tgatgtcttctacatcaatgtataagtgtgtaatagaac 644  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||| |||  | |    |||||||||| ||| ||  |||||||||||||||||||    
T  5356573 atattggcaagctctagcagccagctgagtaggactgcagaatcctctttgacgaagccgacgatgtcttctgcattaacatataagtgtgtaatagaac 5356474  T
Q  645 aaggatggctcacacatagtttttgattcggagtaccagtaaaagcaaagttagaaagacacggagcagataacttgagtttgcgt 730  Q
    ||||||||||||||| |||| || |||| |||||||||||||||| |||||||| ||||| ||||| | |||||| ||||||||||    
T  5356473 aaggatggctcacacttagtattagatttggagtaccagtaaaagaaaagttagtaagactcggagtaaataactcgagtttgcgt 5356388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 159 - 727
Target Start/End: Complemental strand, 5369636 - 5369064
Alignment:
Q  159 ttaatcatcattatctatgatggtaatctttgctaacggtgagttttgaagcaaaaattccactactccatcaggtatgaatttagctttaattaactga 258  Q
    |||||||||||||| ||||| | ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||  | || |||    
T  5369636 ttaatcatcattatttatgaagttaacctttgctaacggtgaggtttgaagcaaaaattccactactccaacaggtatgagtttatctttcgtcaaatga 5369537  T
Q  259 attccggcaccttctttcttgaacttgcgacatctcagtatcatgtataatccaggtgtaagcggtttcatttctacttgtagtgactccaggttacaca 358  Q
    ||||  | |||   || |||| ||||||||   |||||||  | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |    
T  5369536 attctagaacccgtttccttgtacttgcgatgactcagtaatacgtataatccaggtgtaagcagtttcatttctacttgtagtgactccaagttacata 5369437  T
Q  359 aggaattgagtttaaccttgatcaaatcaggaacaaaggagagaacctaacgaaggaaagaaggatagttatatattttagacaaaatttatatataaag 458  Q
    ||||| |||||||||| |||| ||||||||||||||| |||||||||||  ||| |||||| ||| | | ||| |||||||||  |||||| |||| ||     
T  5369436 aggaagtgagtttaacattgaacaaatcaggaacaaaagagagaacctattgaatgaaagatggacaatcatacattttagac--aatttagatat-aat 5369340  T
Q  459 aaacggaaaatacaagcaattgaagaacaaaa--tataaatatatcggcctcaaaacctgaagagtattagaagagactgttaatgatttgatattagca 556  Q
    |||| |||||| |||||||  | ||||| | |  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5369339 aaac-gaaaatgcaagcaacagcagaaccacacgtataaatataacggcctcaaaacctgaagagtattagaagagactgtcaatgatttgatattagca 5369241  T
Q  557 agctctagcagccagctg---aatagggttgcagaatcctcttcgacccatc---tgatgtcttctacatcaatgtataagtgtgtaatagaacaaggat 650  Q
    |||||| |||||||||||   | ||||  |||||||||||||| |||  | |   ||||||||||| ||| |||| ||||||||||||||||||||||||    
T  5369240 agctcttgcagccagctgatcagtaggactgcagaatcctctttgacgaagccgatgatgtcttctgcatgaatgcataagtgtgtaatagaacaaggat 5369141  T
Q  651 ggctcacacatagtttttgattcggagtaccagtaaaagcaaagttagaaagacacggagcagataacttgagtttg 727  Q
    |||||||||||| |||| |||  ||||||||||||||||||||  ||||||| | ||||| |||||||| |||||||    
T  5369140 ggctcacacataattttagatctggagtaccagtaaaagcaaacatagaaagtctcggagtagataactcgagtttg 5369064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 503 - 787
Target Start/End: Complemental strand, 5363260 - 5362973
Alignment:
Q  503 ggcctcaaaacctgaagagtattagaagagactgttaatgatttgatattagcaagctctagcagccagctgaatagggttgcagaatcctcttcgaccc 602  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  5363260 ggcctcaaaacctgaagagtattagaagagactgttaatgatttgatattagcaagctcaagcagccagctgagtagggttgcagaatcctcttcgaccc 5363161  T
Q  603 atctgatgtcttctacatcaatgtataagtgtgtaatagaacaaggatggctcacacatagtttttgattcggagtaccagtaaaagcaaagttagaaag 702  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  5363160 agctgatgtcttctacatcaatgtataagtgtgtaatagaacaaggatggctcacacatagtgtttgattcggagtgccagtaaaagcaaatgtagaaag 5363061  T
Q  703 acacggagcagataacttgagtttgcgtccgta---gctataaagatagtatccatatatagttaagttgacaagcgttgtatttgat 787  Q
    | |||||||||||||| ||| ||||| |  |||   | |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  5363060 atacggagcagataacatgattttgcttttgtacttgttataaagataatatccatatatagttaagttgacaagcgttgtacttgat 5362973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 503 - 787
Target Start/End: Complemental strand, 5368476 - 5368189
Alignment:
Q  503 ggcctcaaaacctgaagagtattagaagagactgttaatgatttgatattagcaagctctagcagccagctgaatagggttgcagaatcctcttcgaccc 602  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  5368476 ggcctcaaaacctgaagagtattagaagagactgttaatgatttgatattagcaagctcgagcagccagctgagtagggttgcagaatcctcttcgaccc 5368377  T
Q  603 atctgatgtcttctacatcaatgtataagtgtgtaatagaacaaggatggctcacacatagtttttgattcggagtaccagtaaaagcaaagttagaaag 702  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  5368376 agctgatgtcttctacatcaatgtataagtgtgtaatagaacaaggatggctcacacatagtgtttgattcggagtgccagtaaaagcaaatgtagaaag 5368277  T
Q  703 acacggagcagataacttgagtttgcgtccgta---gctataaagatagtatccatatatagttaagttgacaagcgttgtatttgat 787  Q
    | |||||||||||||| ||| ||||| |  |||   | |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  5368276 atacggagcagataacatgattttgcttttgtacttgttataaagataatatccatatatagttaagttgacaagcgttgtacttgat 5368189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 152 - 463
Target Start/End: Complemental strand, 5363579 - 5363276
Alignment:
Q  152 tttcaccttaatcatcattatctatgatggtaatctttgctaacggtgagttttgaagcaaaaattccactactccatcaggtatgaatttagctttaat 251  Q
    ||||||||||||||||||||| | | ||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||  |    
T  5363579 tttcaccttaatcatcattattttttatgttaatctttgctaaaggtgagttttgaagcaaaaattccactactccagcaggtatgaatttagttttctt 5363480  T
Q  252 taactgaattccggcaccttctttcttgaacttgcgacatctcagtatcatgtataatccaggtgtaagcggtttcatttctacttgtagtgactccagg 351  Q
     || |||||||| | ||||||||| |||||| |  |      |||| ||| || |||||||| |||||| ||||||||||||||||||||  |||||| |    
T  5363479 caaatgaattccagaaccttctttattgaacatatg------cagtttcaagtctaatccagttgtaagaggtttcatttctacttgtagcaactccaag 5363386  T
Q  352 ttacacaaggaattgagtttaaccttgatcaaatcaggaacaaaggagagaacctaacgaaggaaagaagg-------atagttatatattttagacaaa 444  Q
    ||||| |||||| |||||||||||||         |||||||||||||||||||||  |||||| | | ||       ||||||||| ||||||||||||    
T  5363385 ttacataaggaagtgagtttaacctt---------aggaacaaaggagagaacctattgaaggagaaatggatagttaatagttatacattttagacaaa 5363295  T
Q  445 atttatatataaagaaacg 463  Q
    |||||||||||||||||||    
T  5363294 atttatatataaagaaacg 5363276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 5375517 - 5375472
Alignment:
Q  16 atatgaactcaaacaattagataattttcattttactagacaagta 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5375517 atatgaactcaaacaattagataattttcattttactagacaagta 5375472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 342 - 407
Target Start/End: Complemental strand, 7178967 - 7178902
Alignment:
Q  342 tgactccaggttacacaaggaattgagtttaaccttgatcaaatcaggaacaaaggagagaaccta 407  Q
    |||||||| ||||||||||| | |||||||||||||||  |||| |||||| ||||||||||||||    
T  7178967 tgactccacgttacacaaggtagtgagtttaaccttgaataaattaggaactaaggagagaaccta 7178902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 7127081 - 7127014
Alignment:
Q  340 agtgactccaggttacacaaggaattgagtttaaccttgatcaaatcaggaacaaaggagagaaccta 407  Q
    ||||||| || ||||| |||||||| |||||||||||| | |||| ||||||| ||||||||||||||    
T  7127081 agtgacttcaagttacgcaaggaatggagtttaaccttcaacaaaccaggaactaaggagagaaccta 7127014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 7179090 - 7179028
Alignment:
Q  174 tatgatggtaatctttgctaacggtgagttttgaagcaaaaattccactactccatcaggtat 236  Q
    ||||||| ||| ||||||| | |||||||||||||||||||| |||| |||||||||| ||||    
T  7179090 tatgatgttaacctttgctgatggtgagttttgaagcaaaaaatccagtactccatcaagtat 7179028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 8399989 - 8400055
Alignment:
Q  175 atgatggtaatctttgctaacggtgagttttgaagcaaaaat-----tccactactccatcaggtat 236  Q
    |||||| ||| ||||||| | |||||||||||||||||||||     ||||||||||||||||||||    
T  8399989 atgatgttaacctttgctgatggtgagttttgaagcaaaaattaaagtccactactccatcaggtat 8400055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 5363713 - 5363668
Alignment:
Q  16 atatgaactcaaacaattagataattttcattttactagacaagta 61  Q
    |||||||||||||||| |||   |||||||||||||||||||||||    
T  5363713 atatgaactcaaacaagtaggacattttcattttactagacaagta 5363668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 460
Target Start/End: Complemental strand, 5368532 - 5368495
Alignment:
Q  423 atagttatatattttagacaaaatttatatataaagaa 460  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  5368532 atagttatacattttagaccaaatttatatataaagaa 5368495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 7119887 - 7119802
Alignment:
Q  323 gtttcatttctacttgtagtgactccaggttacacaaggaattgagtttaaccttgatcaaatcaggaacaaaggagagaacctaa 408  Q
    ||||||||| ||||  || ||||| || |||||||||||||   || |||||||| |  ||||||||||| |||||||||||||||    
T  7119887 gtttcatttttactcttaatgacttcaagttacacaaggaaggtagcttaaccttcaataaatcaggaactaaggagagaacctaa 7119802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 7120023 - 7119982
Alignment:
Q  196 ggtgagttttgaagcaaaaattccactactccatcaggtatg 237  Q
    |||||||||||||||||||| || |||| |||||||||||||    
T  7120023 ggtgagttttgaagcaaaaagtcgactattccatcaggtatg 7119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 573
Target Start/End: Complemental strand, 7126749 - 7126688
Alignment:
Q  512 acctgaagagtattagaagagactgttaatgatttgatattagcaagctctagcagccagct 573  Q
    |||||||||||||| |||||||| || |||| |||| ||| |||||||||| ||| ||||||    
T  7126749 acctgaagagtattcgaagagacggtcaatgttttggtatcagcaagctcttgcaaccagct 7126688  T

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Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 512 - 579
Target Start/End: Original strand, 33839541 - 33839608
Alignment:
Q  512 acctgaagagtattagaagagactgttaatgatttgatattagcaagctctagcagccagctgaatag 579  Q
    |||||||||||| | |||||||||||||||||||  || |||||||| ||||||||||||||||||||    
T  33839541 acctgaagagtacttgaagagactgttaatgattctatgttagcaaggtctagcagccagctgaatag 33839608  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 33839161 - 33839204
Alignment:
Q  194 acggtgagttttgaagcaaaaattccactactccatcaggtatg 237  Q
    ||||||||||||||||||| || ||||||| |||||||||||||    
T  33839161 acggtgagttttgaagcaagaagtccactattccatcaggtatg 33839204  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 7174411 - 7174461
Alignment:
Q  186 ctttgctaacggtgagttttgaagcaaaaattccactactccatcaggtat 236  Q
    ||||||| |||||||||||||||| |||||||||| || ||||||| ||||    
T  7174411 ctttgctgacggtgagttttgaaggaaaaattccaatattccatcatgtat 7174461  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 33843077 - 33843118
Alignment:
Q  194 acggtgagttttgaagcaaaaattccactactccatcaggta 235  Q
    ||||||||||||||||||| || ||||||| |||||||||||    
T  33843077 acggtgagttttgaagcaagaagtccactattccatcaggta 33843118  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 30054329 - 30054420
Alignment:
Q  318 aagcggtttcatttctacttgtagtgactccaggtt---acacaaggaattgagtttaaccttgatcaaatcaggaacaaaggagagaaccta 407  Q
    ||||||||||||||| |||||||||||||||| |||   ||||||||||  ||||||||||||||  |||||||||| ||| |||||||||||    
T  30054329 aagcggtttcatttcaacttgtagtgactccaagttacaacacaaggaagagagtttaaccttgaataaatcaggaagaaa-gagagaaccta 30054420  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 508 - 597
Target Start/End: Original strand, 30054498 - 30054587
Alignment:
Q  508 caaaacctgaagagtattagaagagactgttaatgatttgatattagcaagctctagcagccagctgaatagggttgcagaatcctcttc 597  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||| || || ||| |||||| ||| ||||  |||||| || |||||    
T  30054498 caaaacctgaagagtatcagaagagacagtcaatgatttgatattagaaaactgtagtagccagttgagtaggactgcagattcgtcttc 30054587  T

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Target: chr7 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 577
Target Start/End: Original strand, 44500709 - 44500774
Alignment:
Q  512 acctgaagagtattagaagagactgttaatgatttgatattagcaagctctagcagccagctgaat 577  Q
    |||||||||||| | | |||||| || |||||||| || |||||||||||||| ||||||||||||    
T  44500709 acctgaagagtagttgtagagaccgtcaatgattttatgttagcaagctctagtagccagctgaat 44500774  T

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Target: chr4 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 573
Target Start/End: Original strand, 36590659 - 36590720
Alignment:
Q  512 acctgaagagtattagaagagactgttaatgatttgatattagcaagctctagcagccagct 573  Q
    |||||||||||| | | |||||| || |||||||||||||||||||| |||| |||||||||    
T  36590659 acctgaagagtactcgcagagaccgtcaatgatttgatattagcaagttctaacagccagct 36590720  T

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Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 36590356 - 36590404
Alignment:
Q  189 tgctaacggtgagttttgaagcaaaaattccactactccatcaggtatg 237  Q
    |||| ||||||||||||||| |||||| ||||||| |||||||||||||    
T  36590356 tgctgacggtgagttttgaatcaaaaagtccactattccatcaggtatg 36590404  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 28092182 - 28092141
Alignment:
Q  196 ggtgagttttgaagcaaaaattccactactccatcaggtatg 237  Q
    ||||||||||||| |||||| ||||||| |||||||||||||    
T  28092182 ggtgagttttgaatcaaaaagtccactattccatcaggtatg 28092141  T

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