View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12880_low_1 (Length: 882)

Name: NF12880_low_1
Description: NF12880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12880_low_1
NF12880_low_1
[»] chr2 (41 HSPs)
chr2 (18-872)||(36059668-36060505)
chr2 (446-872)||(39081273-39081696)
chr2 (446-795)||(1418785-1419132)
chr2 (460-763)||(38599290-38599592)
chr2 (446-872)||(13997192-13997614)
chr2 (486-801)||(29480471-29480787)
chr2 (502-805)||(18172773-18173073)
chr2 (590-872)||(17117408-17117691)
chr2 (502-805)||(38985540-38985842)
chr2 (502-800)||(18915889-18916188)
chr2 (493-872)||(1226030-1226408)
chr2 (502-872)||(21746994-21747364)
chr2 (502-805)||(15457430-15457734)
chr2 (488-805)||(2063721-2064039)
chr2 (446-789)||(26151595-26151939)
chr2 (446-800)||(31273002-31273355)
chr2 (446-789)||(18676158-18676503)
chr2 (446-773)||(27302400-27302715)
chr2 (488-789)||(42411406-42411706)
chr2 (438-575)||(32186211-32186348)
chr2 (488-789)||(45618892-45619192)
chr2 (514-773)||(41096400-41096660)
chr2 (488-789)||(7993548-7993848)
chr2 (558-871)||(4855979-4856293)
chr2 (450-789)||(6530536-6530875)
chr2 (488-751)||(19367304-19367568)
chr2 (446-789)||(13020294-13020638)
chr2 (485-675)||(34061815-34062007)
chr2 (484-789)||(13001556-13001855)
chr2 (606-789)||(36481428-36481611)
chr2 (488-805)||(45042303-45042625)
chr2 (514-787)||(12269367-12269639)
chr2 (488-789)||(25222238-25222539)
chr2 (590-789)||(42759604-42759802)
chr2 (454-789)||(9029495-9029812)
chr2 (650-732)||(38599593-38599675)
chr2 (543-647)||(18482495-18482600)
chr2 (521-617)||(12072449-12072543)
chr2 (744-801)||(26261446-26261504)
chr2 (722-803)||(4264709-4264789)
chr2 (722-805)||(24233653-24233735)
[»] chr7 (44 HSPs)
chr7 (438-805)||(26633231-26633596)
chr7 (446-870)||(36438117-36438539)
chr7 (446-805)||(40737832-40738180)
chr7 (468-803)||(32956670-32956998)
chr7 (449-752)||(7366570-7366867)
chr7 (502-872)||(1365939-1366310)
chr7 (446-699)||(18895334-18895590)
chr7 (483-805)||(30739033-30739358)
chr7 (548-805)||(773714-773972)
chr7 (477-801)||(41908081-41908407)
chr7 (512-805)||(42311950-42312243)
chr7 (468-805)||(40841073-40841414)
chr7 (456-653)||(9479015-9479208)
chr7 (489-871)||(33909980-33910365)
chr7 (467-847)||(41852090-41852467)
chr7 (483-805)||(3799594-3799911)
chr7 (502-785)||(26282391-26282676)
chr7 (446-789)||(18015428-18015772)
chr7 (477-805)||(28589976-28590301)
chr7 (597-869)||(25610091-25610362)
chr7 (446-789)||(46221550-46221894)
chr7 (559-789)||(12251135-12251365)
chr7 (502-872)||(40001474-40001830)
chr7 (489-789)||(36796219-36796520)
chr7 (514-789)||(6379932-6380206)
chr7 (453-789)||(42160970-42161306)
chr7 (454-789)||(33418964-33419301)
chr7 (552-872)||(44875922-44876238)
chr7 (485-805)||(7636153-7636483)
chr7 (514-789)||(44893877-44894151)
chr7 (446-666)||(4099840-4100063)
chr7 (477-626)||(25061809-25061957)
chr7 (453-773)||(11672464-11672786)
chr7 (450-639)||(8358291-8358481)
chr7 (697-872)||(29730852-29731021)
chr7 (697-872)||(29741926-29742095)
chr7 (519-617)||(2445795-2445889)
chr7 (744-805)||(44002764-44002825)
chr7 (707-773)||(21145491-21145555)
chr7 (446-539)||(12251485-12251579)
chr7 (726-785)||(4100112-4100170)
chr7 (817-872)||(40737761-40737816)
chr7 (747-805)||(28105789-28105847)
chr7 (837-871)||(44893791-44893825)
[»] chr3 (39 HSPs)
chr3 (446-872)||(46904607-46905043)
chr3 (452-872)||(7766943-7767367)
chr3 (488-800)||(27303103-27303413)
chr3 (452-742)||(42009156-42009443)
chr3 (450-805)||(51146818-51147170)
chr3 (456-763)||(50677187-50677492)
chr3 (446-713)||(36538109-36538373)
chr3 (467-872)||(40151895-40152299)
chr3 (454-804)||(21596219-21596566)
chr3 (446-789)||(23164420-23164762)
chr3 (502-872)||(48626792-48627163)
chr3 (514-805)||(28132566-28132857)
chr3 (453-789)||(51939403-51939739)
chr3 (501-789)||(21784627-21784919)
chr3 (488-805)||(25598912-25599236)
chr3 (453-789)||(29387601-29387938)
chr3 (502-872)||(43905616-43905977)
chr3 (485-789)||(24252531-24252837)
chr3 (514-789)||(52654970-52655245)
chr3 (488-773)||(54430468-54430754)
chr3 (488-773)||(18408107-18408391)
chr3 (453-773)||(41706916-41707239)
chr3 (483-797)||(19965716-19966035)
chr3 (489-872)||(1649604-1649978)
chr3 (488-773)||(46791561-46791846)
chr3 (453-789)||(8364052-8364389)
chr3 (488-773)||(13401375-13401660)
chr3 (528-805)||(1254892-1255158)
chr3 (454-773)||(27729633-27729952)
chr3 (446-789)||(23067573-23067917)
chr3 (590-789)||(6715457-6715655)
chr3 (579-693)||(15987207-15987321)
chr3 (575-789)||(20762052-20762266)
chr3 (523-651)||(4207343-4207465)
chr3 (521-654)||(21660445-21660572)
chr3 (629-786)||(27110723-27110879)
chr3 (706-773)||(15998418-15998483)
chr3 (446-534)||(27110909-27110999)
chr3 (836-869)||(27110636-27110669)
[»] chr4 (32 HSPs)
chr4 (446-805)||(35653811-35654168)
chr4 (446-872)||(21791313-21791744)
chr4 (446-772)||(22423562-22423886)
chr4 (487-869)||(5545244-5545625)
chr4 (512-773)||(10575386-10575644)
chr4 (454-669)||(43154755-43154972)
chr4 (502-872)||(55134138-55134510)
chr4 (453-789)||(19661260-19661595)
chr4 (502-768)||(45172514-45172778)
chr4 (456-646)||(24449007-24449200)
chr4 (514-789)||(23426014-23426288)
chr4 (453-789)||(32130638-32130973)
chr4 (488-789)||(53011628-53011931)
chr4 (488-789)||(27632313-27632614)
chr4 (453-789)||(28463436-28463772)
chr4 (502-805)||(34982154-34982457)
chr4 (488-871)||(11681505-11681892)
chr4 (488-871)||(11689784-11690171)
chr4 (454-805)||(26328860-26329213)
chr4 (574-789)||(41038252-41038465)
chr4 (512-789)||(23256534-23256810)
chr4 (669-801)||(24449196-24449328)
chr4 (515-789)||(29579823-29580095)
chr4 (558-789)||(44478025-44478256)
chr4 (514-789)||(29221469-29221743)
chr4 (488-748)||(16072509-16072774)
chr4 (611-747)||(51066314-51066449)
chr4 (675-805)||(16887813-16887943)
chr4 (453-528)||(48512330-48512407)
chr4 (488-603)||(21168972-21169088)
chr4 (817-872)||(24449347-24449402)
chr4 (821-871)||(23256847-23256897)
[»] chr1 (43 HSPs)
chr1 (372-869)||(44836492-44836994)
chr1 (457-872)||(37873519-37873940)
chr1 (446-872)||(42739983-42740406)
chr1 (501-872)||(17674117-17674488)
chr1 (477-800)||(15441195-15441516)
chr1 (457-805)||(24556696-24557035)
chr1 (446-805)||(22386667-22387022)
chr1 (453-805)||(27703365-27703715)
chr1 (461-805)||(50371023-50371367)
chr1 (464-805)||(26486206-26486533)
chr1 (563-794)||(13120708-13120939)
chr1 (502-869)||(12971336-12971704)
chr1 (477-802)||(5560388-5560713)
chr1 (488-869)||(25930518-25930902)
chr1 (453-789)||(50552374-50552711)
chr1 (558-872)||(28885433-28885749)
chr1 (514-789)||(10109662-10109940)
chr1 (446-789)||(30899528-30899876)
chr1 (446-789)||(14084547-14084892)
chr1 (488-789)||(18127785-18128086)
chr1 (453-789)||(48722214-48722556)
chr1 (488-805)||(30004737-30005052)
chr1 (453-760)||(6333396-6333699)
chr1 (484-792)||(1269471-1269772)
chr1 (514-871)||(17487042-17487405)
chr1 (488-773)||(6150636-6150922)
chr1 (548-805)||(9777389-9777648)
chr1 (488-674)||(12884098-12884286)
chr1 (574-871)||(9-310)
chr1 (446-789)||(29207946-29208288)
chr1 (455-789)||(51109949-51110284)
chr1 (488-805)||(20905115-20905437)
chr1 (488-805)||(52055466-52055786)
chr1 (512-632)||(38263804-38263924)
chr1 (483-743)||(31369302-31369541)
chr1 (488-681)||(33124584-33124781)
chr1 (477-646)||(3907377-3907545)
chr1 (446-561)||(13121752-13121863)
chr1 (618-805)||(52240366-52240554)
chr1 (725-805)||(39080452-39080531)
chr1 (526-617)||(32810370-32810459)
chr1 (726-789)||(33124489-33124551)
chr1 (838-871)||(20905049-20905082)
[»] chr8 (37 HSPs)
chr8 (459-785)||(3628598-3628923)
chr8 (453-801)||(32098012-32098361)
chr8 (502-872)||(34523717-34524085)
chr8 (502-805)||(12531489-12531792)
chr8 (454-805)||(42075996-42076342)
chr8 (502-792)||(39697782-39698072)
chr8 (456-646)||(35874807-35875000)
chr8 (502-773)||(23567138-23567408)
chr8 (590-795)||(36514996-36515202)
chr8 (488-789)||(18420456-18420758)
chr8 (488-789)||(13585214-13585515)
chr8 (488-789)||(43967918-43968219)
chr8 (555-769)||(29372340-29372554)
chr8 (514-805)||(43926155-43926445)
chr8 (517-805)||(3471545-3471833)
chr8 (462-869)||(30915052-30915465)
chr8 (477-805)||(5869151-5869479)
chr8 (454-789)||(7857966-7858300)
chr8 (487-792)||(42777668-42777966)
chr8 (669-801)||(35874996-35875128)
chr8 (574-789)||(1004060-1004272)
chr8 (514-747)||(44664935-44665168)
chr8 (484-682)||(33452705-33452901)
chr8 (548-681)||(27074550-27074684)
chr8 (574-789)||(18112118-18112341)
chr8 (721-805)||(33452908-33452992)
chr8 (574-674)||(42951725-42951831)
chr8 (446-539)||(3445555-3445648)
chr8 (573-654)||(5971742-5971819)
chr8 (725-805)||(12268755-12268834)
chr8 (695-789)||(3445660-3445751)
chr8 (605-659)||(3575117-3575171)
chr8 (454-532)||(41666040-41666120)
chr8 (706-789)||(42951643-42951723)
chr8 (817-872)||(35875147-35875202)
chr8 (838-871)||(3445800-3445833)
chr8 (838-871)||(13585573-13585606)
[»] chr6 (34 HSPs)
chr6 (467-805)||(30915192-30915538)
chr6 (450-805)||(3748399-3748752)
chr6 (596-805)||(6294278-6294489)
chr6 (512-872)||(1092804-1093164)
chr6 (502-872)||(29308230-29308601)
chr6 (454-805)||(350295-350651)
chr6 (574-785)||(21946109-21946317)
chr6 (453-789)||(2618236-2618570)
chr6 (488-805)||(57603-57917)
chr6 (453-789)||(6360641-6360975)
chr6 (487-801)||(19231528-19231854)
chr6 (453-789)||(3514698-3515035)
chr6 (501-773)||(12614582-12614851)
chr6 (516-675)||(628055-628215)
chr6 (454-742)||(6754088-6754376)
chr6 (514-727)||(29149345-29149560)
chr6 (502-647)||(1690622-1690767)
chr6 (477-672)||(11088461-11088647)
chr6 (486-789)||(7525015-7525317)
chr6 (446-591)||(7341089-7341228)
chr6 (467-579)||(6294175-6294286)
chr6 (708-805)||(11088706-11088804)
chr6 (502-773)||(31860933-31861186)
chr6 (521-617)||(31234862-31234956)
chr6 (446-675)||(29401013-29401245)
chr6 (467-641)||(14893412-14893585)
chr6 (521-617)||(31243999-31244092)
chr6 (580-872)||(22503751-22504045)
chr6 (729-872)||(1690480-1690624)
chr6 (573-617)||(1327594-1327638)
chr6 (568-615)||(32056056-32056103)
chr6 (454-557)||(21945934-21946034)
chr6 (368-429)||(6294091-6294152)
chr6 (838-871)||(29401406-29401439)
[»] chr5 (42 HSPs)
chr5 (446-872)||(17325727-17326146)
chr5 (446-791)||(10033425-10033770)
chr5 (470-805)||(138043-138377)
chr5 (502-805)||(43511548-43511851)
chr5 (528-805)||(18873409-18873693)
chr5 (477-805)||(27351254-27351582)
chr5 (502-872)||(3349492-3349862)
chr5 (502-872)||(10591038-10591407)
chr5 (502-805)||(29156120-29156423)
chr5 (576-805)||(7390232-7390460)
chr5 (502-868)||(17513703-17514070)
chr5 (442-872)||(16515398-16515806)
chr5 (514-805)||(20975927-20976218)
chr5 (514-872)||(42291643-42292003)
chr5 (512-773)||(4734444-4734706)
chr5 (575-872)||(33281677-33281974)
chr5 (477-733)||(40956223-40956475)
chr5 (502-805)||(5829315-5829614)
chr5 (453-789)||(26377622-26377959)
chr5 (514-804)||(19099145-19099436)
chr5 (574-789)||(13423866-13424081)
chr5 (514-789)||(13474572-13474846)
chr5 (512-773)||(40779132-40779391)
chr5 (450-773)||(13656085-13656410)
chr5 (558-789)||(12661295-12661524)
chr5 (628-797)||(8379282-8379450)
chr5 (518-872)||(931326-931670)
chr5 (477-805)||(23069125-23069457)
chr5 (615-805)||(26312027-26312221)
chr5 (484-619)||(8379538-8379673)
chr5 (514-666)||(36718535-36718689)
chr5 (729-805)||(4177358-4177433)
chr5 (573-617)||(37029051-37029095)
chr5 (722-805)||(17462993-17463078)
chr5 (744-805)||(13288615-13288676)
chr5 (695-789)||(37046906-37046997)
chr5 (514-595)||(26311948-26312029)
chr5 (521-615)||(524870-524961)
chr5 (456-532)||(12661187-12661263)
chr5 (755-805)||(16061081-16061131)
chr5 (838-871)||(13474898-13474931)
chr5 (838-871)||(26377539-26377572)
[»] scaffold0126 (1 HSPs)
scaffold0126 (514-789)||(16652-16926)
[»] scaffold0564 (1 HSPs)
scaffold0564 (595-789)||(1084-1278)
[»] scaffold0181 (1 HSPs)
scaffold0181 (513-805)||(16963-17255)
[»] scaffold0035 (1 HSPs)
scaffold0035 (591-789)||(22653-22850)
[»] scaffold0100 (1 HSPs)
scaffold0100 (488-805)||(46005-46322)
[»] scaffold0606 (1 HSPs)
scaffold0606 (520-693)||(8336-8511)
[»] scaffold0034 (1 HSPs)
scaffold0034 (739-872)||(99083-99219)


Alignment Details
Target: chr2 (Bit Score: 603; Significance: 0; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 603; E-Value: 0
Query Start/End: Original strand, 18 - 872
Target Start/End: Complemental strand, 36060505 - 36059668
Alignment:
Q  18 tagcaattcagggatttgaattattttatttctttggaaaagggattttgattttgagcagtcaaaattctgtaattacactagttccttcattagtgga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36060505 tagcaattcagggatttgaattattttatttctttggaaaagggattttgattttgagcagtcaaaattctgtaattacactagttcctttattagtgga 36060406  T
Q  118 tattcgatcaaaattggacgatttagatttcaatatagatttcaatattttgaagatgnnnnnnn-tccaaaatacaaatttgagatccacagcccaaac 216  Q
    ||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||        |||||||||||||||||| |||||||||||||||    
T  36060405 tattcgatcaaaattggacgatttaaatttcaatatagattttgatattttgaagatgaaaaaaaatccaaaatacaaatttgaaatccacagcccaaac 36060306  T
Q  217 atgccatctatttttctagtctcttttgtattgagaagggatggacaaatagtgacattaaataaagtctattttaatgataaattgcttatcttccatg 316  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36060305 atgccatctatttttctagtctcttctgtattgagaagggatggacaaatagtgacattaaataaagtctattttaatgataaattgcttgtcttccatg 36060206  T
Q  317 tcacatttggttcttctacaacannnnnnnnnngaaagatggttcttcttggggccggatcttggggagcgcaaggagctcaattaaattgggcctctaa 416  Q
    |||||||||||||||||||||||          |||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| |||    
T  36060205 tcacatttggttcttctacaacatttttttt--gaaagatggttcttctcggggccggatcttggggagcacaaggagctcaactaaattgggcctataa 36060108  T
Q  417 aaactatgggcctnnnnnnnntaagtatgatacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttt 516  Q
    |||                  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  36060107 aaa-----------------ataagtatgatacccacccccacttaaattaaaaaattacatgttacttctttttctttctttggtacgcgtataagttt 36060025  T
Q  517 tttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttc 616  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  36060024 tttctagactctagttctactttttagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagttaatttaaaaagctatttc 36059925  T
Q  617 attgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaa 716  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  36059924 attgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacgacgtatgagtgacattccaaacgacgccgttacgtaa 36059825  T
Q  717 attttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac-nnnnnnnnnt 815  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  36059824 attttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagtttagctacaaaaaaaaaat 36059725  T
Q  816 tgcgtttttattttactggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    ||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||    
T  36059724 tgcgtttttattttactggtacctattttaaaaaaagagtcgagcctcctatttcat 36059668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 446 - 872
Target Start/End: Original strand, 39081273 - 39081696
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    ||||||| |||||||||||||||||||||||||||| || |||||| ||||||| |||||||||| ||||||||||||||||||||| |||||||| |||    
T  39081273 atacccatccccacttaaattaaaaaattacatgttact-ctttttttttcttcagtacacgtatgagttttttctagactctagttttactttctggac 39081371  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||| ||||||||    
T  39081372 ataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaattacaacaattatttcttt 39081471  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatt 745  Q
    |    |||||||||| |||||||| ||||| || ||||| ||||||||||||||| ||| |  |||||||||||| ||||||||||||||||||||||||    
T  39081472 tcat-ataaaccattagttttcccctttcctacgacgtaggagtgacattccaaatgacaca-ttaggtaaatttcacctctctttcacttaattttatt 39081569  T
Q  746 ttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactggtgtctatttta 845  Q
    || ||||||||||| |||| |||||||| ||| ||||||||| |||||||||||| ||||         ||  ||||||||||||||||   ||||||||    
T  39081570 ttgttttgtttcatatttaaaagttcttatgattctgattttataatgaagcttaactacacaaaaaaattatgtttttattttactgggacctatttta 39081669  T
Q  846 aaaagagattcgagcctcctatttcat 872  Q
    |||| |||  ||| |||||||||||||    
T  39081670 aaaatagaaccgaacctcctatttcat 39081696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 446 - 795
Target Start/End: Original strand, 1418785 - 1419132
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    ||||||||||||| | |||||||||||||||||||| ||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  1418785 atacccacccccattaaaattaaaaaattacatgttacttttttttctt-cttcagtacacgtatgagttttttctagactctagttctactttttagac 1418883  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||| ||||||||    
T  1418884 ataa-tttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgtaaagctatttcattgaaagaatcacaacaattatttcttt 1418982  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatt 745  Q
    || |||||||| |||| ||||  | ||||| |  ||||||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||||||||    
T  1418983 ttcgcataaactattcattttttcctttcctatgacgtatgagtgacattccaaatgacaccgttaggtaaatttcacttctctttcacttaattttatt 1419082  T
Q  746 ttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaa 795  Q
    || |||||||||||||||| |||||||| ||| | ||| |||||||||||    
T  1419083 ttgttttgtttcatgtttaaaagttcttctgattttgactttttaatgaa 1419132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 460 - 763
Target Start/End: Original strand, 38599290 - 38599592
Alignment:
Q  460 ttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgct 559  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||  |||| ||||||| ||| | || | ||||||||||||    
T  38599290 ttaaattaaaaaattacatgttacttctttttctttcttcggtacaactatgagttttttcttaactcaagttctattttatggatataaatttgatgct 38599389  T
Q  560 atcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccat 659  Q
    |||||| ||  ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || |||||| |||| |||||| ||||||||||    
T  38599390 atcaaatcattatcaatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaaagaatcaaaacaattatttatttttt-cataaaccat 38599488  T
Q  660 tcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcat 759  Q
    |||||||||| |||||||| ||||||||||| |||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||    
T  38599489 tcgttttcccctttcccacgacgtatgagtggcatttcaaacgacaccgttaggtaaatttcatctctctttcacttaattttattttattttatttcat 38599588  T
Q  760 gttt 763  Q
    ||||    
T  38599589 gttt 38599592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 446 - 872
Target Start/End: Original strand, 13997192 - 13997614
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||| |||||| |||||||| ||||||||| ||||| ||| ||||| ||    |  ||||||||| ||||||| |||||||||||||  ||||||| |||    
T  13997192 atactcaccccaacttaaataaaaaaattatatgttacttttttttatt----caatacacgtatgagtttttcctagactctagtttcactttctggac 13997287  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    | ||||||||||||||  ||||||| |||||||| ||||||||||||| | ||||||| |||| ||||||||||||||||| ||||||||| ||||||||    
T  13997288 ataaatttgatgctattgaaccaccgtcaatttgaataatcacttaatgagtcaatttgaaaaactatttcattgaaagaatcacaacaattatttcttt 13997387  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatt 745  Q
    || ||||||||||||||||||||| ||||| || |||||||||||||||||||||| || |  |||||||||||| || ||||||||||||||| || ||    
T  13997388 ttcgcataaaccattcgttttccc-tttcctacgacgtatgagtgacattccaaacaacacatttaggtaaatttcacatctctttcacttaatcttgtt 13997486  T
Q  746 ttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac-nnnnnnnnnttgcgtttttattttactggtgtctatttt 844  Q
    |||||||||||  |||||| |||||||| ||| |||||||||||||||||||||||||||          ||||||||| |||||||||  | |||||||    
T  13997487 ttattttgttttgtgtttaaaagttcttctgattctgattttttaatgaagcttagctacacaaaaagaattgcgttttgattttactgtggcctatttt 13997586  T
Q  845 aaaaagagattcgagcctcctatttcat 872  Q
    ||||| |||  |||||||||||||||||    
T  13997587 aaaaatagaaccgagcctcctatttcat 13997614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 486 - 801
Target Start/End: Complemental strand, 29480787 - 29480471
Alignment:
Q  486 ctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataat 585  Q
    |||||| || |||| ||| |||||| | |||||| |||||| |||||| ||||||| |||| |||||||||||||| ||||||||||||||||| ||||     
T  29480787 cttttttttccttcagtagacgtatgatttttttttagactttagttcaactttctggacataaatttgatgctattaaaccaccatcaatttgaataaa 29480688  T
Q  586 cacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    |||||| ||| ||||||| ||||  |||||||||||||||| ||||||||| |||||||||| |||||||||||| || ||||| ||||  || || ||     
T  29480687 cacttattcagtcaatttgaaaaattatttcattgaaagaatcacaacaattatttctttttcgcataaaccatttgtcttcccctttcttacgacatag 29480588  T
Q  686 gagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatt 785  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| ||||||||| | |||| |||||||| ||| |||||||    
T  29480587 gagtgacattccaaacgacaccgttaggtaaagttcacctctctttcacttaattttattttgttttgtttcgtatttaaaagttcttctgattctgatt 29480488  T
Q  786 -ttttaatgaagcttag 801  Q
     ||||||||||| ||||    
T  29480487 tttttaatgaagattag 29480471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 502 - 805
Target Start/End: Complemental strand, 18173073 - 18172773
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| || |||| || | | |||| |||| || | |||||||||||||   |||||||||||||||||||||| |||||    
T  18173073 tacacgtttgagttttttctagacttta-ttctcctatatggacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcactcaat 18172975  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||| || |||||| | ||||||    
T  18172974 ttgaaaagctatttcatcgaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccacaacggataagtgacaaatccaaa 18172875  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    |||||||||| |||||||| ||||||||||||||  |||||| || ||||| |||||||||||||||  |||| ||| |||||||||||||| ||||||     
T  18172874 cgacgccgtt-ggtaaattctacctctctttcac--aatttttttgtatttcgtttcatgtttagaaactcttctgattctgattttttaataaagcttg 18172778  T
Q  801 gctac 805  Q
    |||||    
T  18172777 gctac 18172773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 590 - 872
Target Start/End: Complemental strand, 17117691 - 17117408
Alignment:
Q  590 taatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagt 689  Q
    |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||| |||||||||||| || |||    
T  17117691 taatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttctttttcatataaaccattcgttttcccctttcccacaacggataagt 17117592  T
Q  690 gac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttt 788  Q
    ||| | |||||||||| |||||| ||||||| |||||||||||||||||||||| || ||||| |||||||||||||||| |||| ||| ||||||||||    
T  17117591 gacaaatccaaacgacaccgtta-gtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctgattttt 17117493  T
Q  789 taatgaagcttagctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    |||| ||||||||||||         |||| ||||||||||| | || | |||||||||| |||||  |||||||||||||||||    
T  17117492 taataaagcttagctacacaaaaaaattgcatttttattttattgggggcctattttaaatagagagccgagcctcctatttcat 17117408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 502 - 805
Target Start/End: Complemental strand, 38985842 - 38985540
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||| ||| || |||| || ||| |||| ||||||| | |||||||||||||  ||||||||||||||| |||||||||||||    
T  38985842 tacacgtttgagttttttctaaacttta-ttctcctatctggacataaatttggtactatcaaaccacctccaatttgtataatcatttaatcaatcaat 38985744  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||||||||||| ||||||||||||||||||||  |||||| |||| |||||||| ||| |||||||| || |||||| | ||||||    
T  38985743 ttgaaaagctatttcattgaaagaatcacaacaatcatttctttttcacataaaacatttgttttccccttttccacaacggataagtgacaaatccaaa 38985644  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
     |||||||||| || |||| ||| |||||||||||||||||| || ||||| ||||||| |||||||  |||| ||| |||||||||||||| |||||||    
T  38985643 agacgccgtta-gtgaattctacatctctttcacttaatttttttgtatttcgtttcatttttagaaactcttctgattctgattttttaataaagctta 38985545  T
Q  801 gctac 805  Q
     ||||    
T  38985544 actac 38985540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 502 - 800
Target Start/End: Complemental strand, 18916188 - 18915889
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | || |||||||||||| ||||||| |  ||| |||| |||| || | ||||||||||| |  |||||||||||||||||||||||||||||    
T  18916188 tacacgtttgaggtttttctagactttagttcttcaatctggacataaatctggtactatcaaaccatccccaatttgtataatcacttaatcaatcaat 18916089  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtg--acattccaa 699  Q
    || ||||||||||||| |||||||| |||| |||||||||||||||  ||||||| ||| ||||| || |||||||||||| || ||||  | | || ||    
T  18916088 ttgaaaagctatttcactgaaagaatcacagcaatcatttctttttcacataaactatttgtttttccctttcccacaacggataagtgataaaatcgaa 18915989  T
Q  700 acgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctt 799  Q
    |||||||||||| ||||||| |||||||||||||||||||||| || ||||| |||||||||||||||| |||| ||| |||  ||||||||| ||||||    
T  18915988 acgacgccgtta-gtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctatttttttaataaagctt 18915890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 493 - 872
Target Start/End: Complemental strand, 1226408 - 1226030
Alignment:
Q  493 tttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaa 592  Q
    |||||||||||||||| | |||||||||||||||||| |||| ||||   |||| |||| |||||||| ||||||||| ||||||| |||||||||| ||    
T  1226408 tttcttcggtacacgtttgagttttttctagactctaattctcctttg--gacataaatctgatgctaccaaaccaccctcaatttatataatcactcaa 1226311  T
Q  593 tcaatcaatttaaaaagctatttcattgaaa-gaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtga 691  Q
    |||  |||||| ||||| ||||||| | ||| ||| |||||||||||||||||||| |||||||||||| |||||||  |  ||||||||| | || | |    
T  1226310 tcagacaatttgaaaagttatttcaataaaaagaatcacaacaatcatttctttttcgcataaaccatttgttttcc--taccccacaacgaaggaatca 1226213  T
Q  692 -cattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga-tttttt 789  Q
      | ||||||||||  |||||||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||||||||| | | ||||| ||||||    
T  1226212 taaatccaaacgacatcgttaggtaaatttcatctctctttcacttaatttttttttatttcgtttcatgtttagaagttcttctaattctgattttttt 1226113  T
Q  790 aatgaagcttagctac-nnnnnnnnnttgcgtttttattttactggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    ||||||| ||||||||          ||  ||||||||||||  || | |||||||||||||||| ||||||||||||||||||    
T  1226112 aatgaagtttagctacacaaaaaaaattatgtttttatttta-aggggcctattttaaaaagagagtcgagcctcctatttcat 1226030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 502 - 872
Target Start/End: Complemental strand, 21747364 - 21746994
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | || |||||||||||| ||||||| || |||  ||| |||| || | |||||||||||||  ||||||||||||||||||||||| |||||    
T  21747364 tacacgtttgaggtttttctagactttagttcttctatctgaacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaat 21747265  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtga-cattccaaa 700  Q
    ||||||  |||| |||||||||||| ||||||||| ||||||||||  ||||||||||||||||| || |||||||||||  || |||||  | | ||||    
T  21747264 ttaaaatactatgtcattgaaagaatcacaacaataatttctttttcacataaaccattcgtttttccctttcccacaacagataagtgagaaattcaaa 21747165  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    ||||||||||| ||||||| ||||||||||||||| |||||| || ||||| |||||||||||| ||| |||| ||| |||  ||||||||| |||||||    
T  21747164 cgacgccgtta-gtaaattctacctctctttcactgaatttt-ttgtatttcgtttcatgtttaaaagctcttttgattctatttttttaataaagctta 21747067  T
Q  801 gctacnnnnnnnnnttgcgtttttattttactggtg-tctattttaaaaagagattcgagcctcctatttcat 872  Q
      |||         ||| |||||||||||| ||| |  |||||||||| |||||  |||||||||||||||||    
T  21747066 attacacaaaaaaattgtgtttttattttattggagacctattttaaatagagagccgagcctcctatttcat 21746994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 502 - 805
Target Start/End: Original strand, 15457430 - 15457734
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactt-tctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaa 600  Q
    ||||||| | ||||||||||||||| |||||| |||| ||  |||| |||| || | ||||||||| |||  ||||||||||||||||||||||| ||||    
T  15457430 tacacgtttgagttttttctagactttagttc-acttatccggacataaatctggtactatcaaactacccccaatttgtataatcacttaatcagtcaa 15457528  T
Q  601 tttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaacgtatgagtgac-attcca 698  Q
    ||| ||||||||||| |||||||||| ||||||||| |||| ||||||  || ||||||||||||||||| |||||||||||| |  |||||| | ||||    
T  15457529 tttgaaaagctattttattgaaagaatcacaacaataattttttttttcacacaaaccattcgttttcccctttcccacaacggacaagtgacaaatcca 15457628  T
Q  699 aacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagct 798  Q
    |||||||| |||| ||||||| || ||||||||||||||||||| || | ||| |||||||||| ||||| |||| | | | |||||||||||| |||||    
T  15457629 aacgacgctgtta-gtaaattctatctctctttcacttaatttttttgtttttcgtttcatgttcagaagctcttcttattttgattttttaataaagct 15457727  T
Q  799 tagctac 805  Q
    |||||||    
T  15457728 tagctac 15457734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 488 - 805
Target Start/End: Original strand, 2063721 - 2064039
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    |||||||||||||||| |||| | |||||||| |||||||||||| | |||| |  ||| |||| | || |||||||||||||   ||||||||||||||    
T  2063721 ttttctttcttcggtatacgtttgagttttttttagactctagttttcctttttgtacataaatataatcctatcaaaccacccctaatttgtataatca 2063820  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttt-ttgcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    |||||||| |||||||  ||||||||||||||||||||| |||||||||||||| ||||   ||| |||||||||||||| |||||| |||||||  | |    
T  2063821 cttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcccgcaaaaaccattcgttttacctttttccacaacagagg 2063920  T
Q  687 agtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga-t 784  Q
    |||||| | | |||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  || ||| |||||||| |||| ||| ||||| |    
T  2063921 agtgacaaattcaaacgacaccgttagataaatttcac--ctctttcacttaatttttttttaattccttccatatttagaaggtcttctgattctgatt 2064018  T
Q  785 tttttaatgaagcttagctac 805  Q
    |||||||||||| ||||||||    
T  2064019 tttttaatgaagtttagctac 2064039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 446 - 789
Target Start/End: Complemental strand, 26151939 - 26151595
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagact-ctagttctactttctag 543  Q
    ||||||||||||| |||||| |||||  || |||||   || |||||||||||  ||| |||| | |||||||| ||||||| |||||||| |||| |      
T  26151939 atacccacccccatttaaataaaaaatatatatgttatatccttttctttctttagtatacgtttgagtttttttctagacttctagttctcctttttgt 26151840  T
Q  544 acaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttct 643  Q
    ||| ||||  ||| |||||||||||||   |||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||| |    
T  26151839 acataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 26151740  T
Q  644 tt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattt 741  Q
    || || |||||||||||||||||| || ||| | |||||  | ||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||    
T  26151739 ttcttcgcataaaccattcgttttacccttttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaattt 26151642  T
Q  742 tattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||||| ||  |||||||||||||| ||||| ||| |||||||||||    
T  26151641 t-ttttaattactttcatgtttagaacttcttctgattctgatttttt 26151595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 446 - 800
Target Start/End: Complemental strand, 31273355 - 31273002
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    ||||||||||||||| |||| |||||  || ||||| | || |||||||||||  ||| || | | |||||||| || |||| || ||| |||||| |||    
T  31273355 atacccacccccactcaaataaaaaatatatatgttacatcattttctttctttagtatacatttgagttttttgtatactccagctctcctttctggac 31273256  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
      |||||||||| ||||||||||||  ||||||||||||||| ||||||| |||||||  ||  |||||||||| |||||| || |||| ||||||||||    
T  31273255 ttaaatttgatgttatcaaaccaccc-caatttgtataatcatttaatcagtcaatttggaatactatttcattaaaagaatcataacattcatttcttt 31273157  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttat 744  Q
    || |||||||||||| ||||| |  |||||||||||  |  |||||| | |||||||||| | ||||||||||||| || |||||||| ||||||||| |    
T  31273156 ttcgcataaaccatttgtttttctctttcccacaacagaaaagtgacaaatccaaacgacacagttaggtaaatttcacttctctttcgcttaatttt-t 31273058  T
Q  745 tttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
     ||| || |||| || ||||||||||||| ||| | ||||||||||||||||||||    
T  31273057 cttaattcgtttaatttttagaagttcttctgattttgattttttaatgaagctta 31273002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 446 - 789
Target Start/End: Complemental strand, 18676503 - 18676158
Alignment:
Q  446 atacccacccc-cacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctag 543  Q
    ||||||||||| ||||||||| |||||  || |||||   || |||||||||||  |||||||| | |||||||| ||||||||||||||| |||| |      
T  18676503 atacccacccctcacttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgt 18676404  T
Q  544 acaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttct 643  Q
    ||| ||||  ||| ||||||||| |||   |||||||||||| ||||||||| |||||||  ||||||||||||||||||||| |||||||||||||| |    
T  18676403 acataaatcggatcctatcaaactacccctaatttgtataataacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 18676304  T
Q  644 tt--tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaatt 740  Q
    ||  ||||||||||||||||||||| || ||| ||||||   | ||||||| | | |||||||| ||||||| |||| || ||  |||||||||||||||    
T  18676303 tttctttgcataaaccattcgttttacccttttccacaaaagaggagtgacaaattcaaacgacaccgttagataaagttcac--ctctttcacttaatt 18676206  T
Q  741 ttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    || ||||| ||  |||||||||||||||||||| ||| |||||||||||    
T  18676205 tt-ttttaattcctttcatgtttagaagttcttctgattctgatttttt 18676158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 446 - 773
Target Start/End: Complemental strand, 27302715 - 27302400
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||||||| ||||||||||| ||||||| ||||||| ||| |||||||||  |||  |||| | | |||||||||||||||||| |||| || ||| |||    
T  27302715 atacccacgcccacttaaataaaaaaat-acatgttacttttttttcttt--tcgaaacacatttgagttttttctagactctaattcttctgtctggac 27302619  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    ||||||| ||||||| |||| |||| |||||||||||||||||||||||  ||||||| ||||||||| ||||| |||||| |||||||||||||| |||    
T  27302618 aaaaattcgatgctaccaaatcaccctcaatttgtataatcacttaatcggtcaatttgaaaagctatatcattaaaagaatcacaacaatcatttattt 27302519  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttat 744  Q
    || ||||||||||||| ||||| | |||  ||        ||||||| | ||||||||||  |||||||||||||| |||| | |||||||||||||  |    
T  27302518 ttcgcataaaccattcattttcaccttttgca--------gagtgacaaatccaaacgacaacgttaggtaaatttcacctttatttcacttaattt--t 27302429  T
Q  745 tttattttgtttcatgtttagaagttctt 773  Q
    || |||| ||||||||||||  |||||||    
T  27302428 ttaatttcgtttcatgtttattagttctt 27302400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 488 - 789
Target Start/End: Complemental strand, 42411706 - 42411406
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    |||||||||||  |||||||| | ||||||||||||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   ||||||||||||||    
T  42411706 ttttctttctttagtacacgtttgagttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatca 42411607  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctt-ttttgcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    |||||| | |||||||  |||||||||||||| |||||| |||||||||||||| ||  || |||||||||||||||||| || |||  ||||||  | |    
T  42411606 cttaattagtcaatttggaaagctatttcatttaaagaatcacaacaatcattttttacttcgcataaaccattcgttttaccctttttcacaacagagg 42411507  T
Q  687 agtg-acattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatt 785  Q
    |||| | | |||||||||| ||||||| ||||||| ||  ||||||||||||||| | ||||| ||| ||||||||||| |||||||| ||| |||||||    
T  42411506 agtgaaaaatccaaacgacaccgttagataaatttaac--ctctttcacttaattat-ttttaatttctttcatgtttaaaagttcttctgattctgatt 42411410  T
Q  786 tttt 789  Q
    ||||    
T  42411409 tttt 42411406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 438 - 575
Target Start/End: Complemental strand, 32186348 - 32186211
Alignment:
Q  438 taagtatgatacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctact 537  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||  ||| ||||||||||||||||||||||||||    
T  32186348 taagtataatatccacccccaattaaattaaaaaattacatgttacttctttttctttcttcggcacatatatgagttttttctagactctagttctact 32186249  T
Q  538 ttctagacaaaaatttgatgctatcaaaccaccatcaa 575  Q
    || |||||| ||||||||||||||||||||||||||||    
T  32186248 ttttagacataaatttgatgctatcaaaccaccatcaa 32186211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 488 - 789
Target Start/End: Original strand, 45618892 - 45619192
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttctagact-ctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||  ||| |||| | ||||||||||||||| |||||||| |||| |  ||| ||||  ||| |||||||||||||   |||||||||||||    
T  45618892 ttttctttctttagtatacgtttgagttttttctagacttctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 45618991  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    ||||||||| |||||||  || |||||||||||||||||| |||||||||||||| ||| || |||||||||||| ||||| || ||| |||||||  |     
T  45618992 acttaatcagtcaatttggaa-gctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatttgttttacccttttccacaacagag 45619090  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
    ||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  |||||||||||||| ||||| ||| ||||||    
T  45619091 gagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaacttcttctgattctgat 45619187  T
Q  785 ttttt 789  Q
    |||||    
T  45619188 ttttt 45619192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 514 - 773
Target Start/End: Complemental strand, 41096660 - 41096400
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||||||||||| |||| |  ||| ||||  ||| |||||||| ||||   |||||||||||||||||||||| |||||||  ||| ||||    
T  41096660 ttttttctagactctagttctcctttttgtacataaatcagatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaaactat 41096561  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt--tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtt 710  Q
    ||||||||||||| |||||||||||||| |||  || |||| ||||||||||||| || ||| |||||||  | ||||||| | |||||||||| |||||    
T  41096560 ttcattgaaagaatcacaacaatcattttttttcttcgcattaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacgacaccgtt 41096461  T
Q  711 aggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    || ||||||| ||  |||||||||||| |||| ||||| ||  ||||||||||||||||||||    
T  41096460 agataaatttcac--ctctttcacttattttttttttaattcctttcatgtttagaagttctt 41096400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 488 - 789
Target Start/End: Original strand, 7993548 - 7993848
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    |||||||||||  |||||| | | ||||||||||||||||||||||| |||| |  ||| |||   ||| |||||||||||||   ||||||||||||||    
T  7993548 ttttctttctttagtacacatttgagttttttctagactctagttctcctttttgtacataaaccggatcctatcaaaccacccctaatttgtataatca 7993647  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt--tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    ||||||||  ||||||  ||||||||||||||||||||| |||||||||| ||| |||  || |||||||||||||||||| || ||| ||||||   |     
T  7993648 cttaatcagccaatttggaaagctatttcattgaaagaatcacaacaatctttttttttcttcgcataaaccattcgttttacccttttccacaatagag 7993747  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
    ||||||| | |||||||||| ||||||| ||||||| ||   |||||||||||  ||| ||||| ||  |||||||||||||||||||| ||| ||||||    
T  7993748 gagtgacaaatccaaacgacaccgttagataaatttcac--atctttcactta--ttttttttaattcctttcatgtttagaagttcttctgattctgat 7993843  T
Q  785 ttttt 789  Q
    |||||    
T  7993844 ttttt 7993848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 558 - 871
Target Start/End: Original strand, 4855979 - 4856293
Alignment:
Q  558 ctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaac 656  Q
    |||||||||||||   |||||||||||||||||||||| | |||||  ||||||||||||||||||||| |||||||||||||| ||| || ||||||||    
T  4855979 ctatcaaaccacccctaatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaac 4856078  T
Q  657 cattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtt 755  Q
    ||||||||||  | ||| |||||||  | ||||||| | ||||||||||   ||||| ||||||| ||  ||||||||||||||||| ||||| ||  ||    
T  4856079 cattcgttttaaccttttccacaacagaggagtgacaaatccaaacgacattgttagataaatttcac--ctctttcacttaatttt-ttttaattcctt 4856175  T
Q  756 tcatgtttagaagttcttgtgaatctga--ttttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagag 852  Q
    |||||||||||| ||||| ||| |||||  ||||||||||||  ||||||||         || || |||||||||||| || | |||||||||||||||    
T  4856176 tcatgtttagaacttcttctgattctgattttttttaatgaaatttagctacacaaaaaaattacg-ttttattttactaggggcctattttaaaaagag 4856274  T
Q  853 attcgagcctcctatttca 871  Q
    | |||||||||||||||||    
T  4856275 agtcgagcctcctatttca 4856293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 450 - 789
Target Start/End: Original strand, 6530536 - 6530875
Alignment:
Q  450 ccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaa 548  Q
    |||||||||||||||| |||||  || | |||   || |||||||||||  ||| | || |||||||||| |||||||||||||||  ||| |  ||| |    
T  6530536 ccacccccacttaaataaaaaatatatacgttatatccttttctttctttagtagatgtttaagtttttttctagactctagttctcatttttgtacata 6530635  T
Q  549 aatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatt-tcttttt 647  Q
    |||  ||| |||||||||||||   |||||||||||||||||||||| ||||||| ||||| |||||||||||||||| ||||||||||||| | || ||    
T  6530636 aatcggatactatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaaggtatttcattgaaagaatcacaacaatcattattttctt 6530735  T
Q  648 tgcataaaccattcgttttcccttttcccacaacgtatgagtgaca-ttccaaacgacgccgttaggtaaattttacctctctttcacttaattttattt 746  Q
     ||||||||||||||||||  | | | |||||||  | ||||||||  | |||||| | | ||||| |||||||  | |||||||||||||||||| |||    
T  6530736 cgcataaaccattcgttttatcctattccacaacagaggagtgacagattcaaacgtcactgttagataaattt--catctctttcacttaatttt-ttt 6530832  T
Q  747 tattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    || ||  |||||||||||||||||||| ||| |||||||||||    
T  6530833 taattcctttcatgtttagaagttcttttgattctgatttttt 6530875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 488 - 751
Target Start/End: Complemental strand, 19367568 - 19367304
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||  |||||||| | |||||||| ||||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   |||||||||||||    
T  19367568 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggattctatcaaaccacccctaatttgtataatc 19367469  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||| || | |||||||||||||||| || ||| |||||||        
T  19367468 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccattcgttttacccttttccacaacagtg 19367369  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattt 751  Q
    ||||||| | | |||||||| ||||||| ||||||| ||  ||||||||||||| ||| ||| ||||    
T  19367368 gagtgacaaattcaaacgacaccgttagataaatttcac--ctctttcacttaactttttttaattt 19367304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 446 - 789
Target Start/End: Original strand, 13020294 - 13020638
Alignment:
Q  446 atacccacccccacttaaattaaaaaat-tacatgttgcttctttttctttcttcggtacacgtataagtttttt--ctagactctagttctactttcta 542  Q
    |||||||||||||||||||| ||||||| || |||||   || |||||||||||  |||||||| | ||||||||  |||||||||||||||  ||| |     
T  13020294 atacccacccccacttaaataaaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctcttttttg 13020393  T
Q  543 gacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttc 642  Q
     ||| ||||  ||| |||||||||||||   |||||||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| ||||     
T  13020394 tacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcatttaaagaatcacaacaataatttt 13020493  T
Q  643 ttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtg-acattccaaacgacgccgttaggtaaattttacctctctttcacttaatt 740  Q
    ||| || |||||||||||||||||| ||||||  ||||||  | ||||| | | | |||| ||| ||||||| ||||||| ||  ||||||||||||||     
T  13020494 tttcttcgcataaaccattcgttttaccttttttcacaacagaggagtgaaaaattcaaatgacaccgttagataaatttcac--ctctttcacttaatc 13020591  T
Q  741 ttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    || ||||| ||  |||||||||||||| ||||| | | |||||||||||    
T  13020592 tt-tttta-ttcctttcatgtttagaacttcttctaattctgatttttt 13020638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 485 - 675
Target Start/End: Complemental strand, 34062007 - 34061815
Alignment:
Q  485 tctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataa 584  Q
    ||||||||||||||| |||||||||| |||||||| |||||| ||||||| |||| |  ||| |||| || | |||||||||||||   ||||||||| |    
T  34062007 tctttttctttcttcagtacacgtatgagttttttttagactatagttcttctttttgtacataaatctggtcctatcaaaccacccataatttgtatga 34061908  T
Q  585 tcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgtttt-cccttttcc 675  Q
    | ||||||||| |||||||  ||||||||||||||||||||| |||||||||||||| ||| || ||||||||||| |||||| |||||||||    
T  34061907 ttacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatccgttttacccttttcc 34061815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 484 - 789
Target Start/End: Original strand, 13001556 - 13001855
Alignment:
Q  484 ttctttttctttcttcggtacacgtata-agttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtat 582  Q
    |||||||||||| ||||||| |||| |  ||||||||||| |||||| |||| |||| || ||| |||||||||||||||||||||||  ||||||||||    
T  13001556 ttctttttcttttttcggtatacgttttgagttttttctaaactctaattctcctttttatacataaatttgatgctatcaaaccacccccaatttgtat 13001655  T
Q  583 aatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacg 682  Q
    ||| | |        ||||||| |||||||||||||| |||||| ||||| |||||||| ||||  | ||| || |||||||||| | |||||||||||     
T  13001656 aattagt--------caatttataaagctatttcattaaaagaatcacaataatcattttttttcagtatatacaattcgttttctcctttcccacaaca 13001747  T
Q  683 tatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatct 781  Q
     | ||||||| | |||||||||| | ||| ||||||||  || ||||||||||||| |  | |||||||| ||||| ||||||||| ||||  ||| |||    
T  13001748 aaggagtgacaaatccaaacgacactgttcggtaaattgcacttctctttcacttattaattttttatttcgtttcgtgtttagaaattctattgattct 13001847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 606 - 789
Target Start/End: Original strand, 36481428 - 36481611
Alignment:
Q  606 aaagctatttcattgaaagaaccacaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacga 703  Q
    ||||||||||||||||||||| |||||||||||||| ||| || ||||||||||||| |||| || ||| |||||||  | ||||||||  |||||||||    
T  36481428 aaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcattttacccttttccacaacagaggagtgacaaatccaaacga 36481527  T
Q  704 cgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||| ||| ||||||| ||||||  ||||||||||||| ||||| ||  |||||||||||||||||||| ||| |||||||||||    
T  36481528 caccggtagataaatttcacctct--ttcacttaatttttttttaattcctttcatgtttagaagttcttctgattctgatttttt 36481611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 488 - 805
Target Start/End: Original strand, 45042303 - 45042625
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt--ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataat 585  Q
    |||||||||||| ||| |||| | ||||||||  ||||||||||||||| ||||    ||| ||||||||| |||||||||||||   ||||||||||||    
T  45042303 ttttctttcttcagtatacgtttgagttttttttctagactctagttcttcttttcgtacataaatttgatcctatcaaaccacccctaatttgtataat 45042402  T
Q  586 cacttaatcaatcaatt---taaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaac 681  Q
    |||||||||| ||||||   | |||  ||||||||||||||||| |||||||||||||| ||| || |||||||||||||| || ||||||| |||||||    
T  45042403 cacttaatcagtcaatttggtgaaagtctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcg-ttaccctttt-ccacaac 45042500  T
Q  682 gtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatc 780  Q
      | ||||||| | | ||||||||   ||| | ||||||| ||  || |||||||||||||| ||||| ||  |||||| |||||||||||||  || ||    
T  45042501 agaggagtgacaaattcaaacgacattgttggataaatttcac--ctatttcacttaatttt-ttttaattcctttcatatttagaagttcttccgattc 45042597  T
Q  781 tga---ttttttaatgaagcttagctac 805  Q
    |||   ||||||||||||| ||||||||    
T  45042598 tgatttttttttaatgaagtttagctac 45042625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 514 - 787
Target Start/End: Original strand, 12269367 - 12269639
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    |||||| ||||||||||||||  ||| |  ||| ||||  ||| |||||||||||||   |||||||||||||||||||||| | | |||  ||||||||    
T  12269367 ttttttttagactctagttctcttttttgcacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagtga-tttggaaagctat 12269465  T
Q  614 ttcattgaaagaaccacaacaatcatttcttttttg-cataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacgacgccgtta 711  Q
    |||||| ||| || ||| |||||||||| ||| ||  |||||||||||||||||  ||||| ||||| |  | || |||||  | |||||||| ||||||    
T  12269466 ttcattaaaaaaatcaccacaatcatttttttcttcacataaaccattcgttttatctttttccacagcagaggaatgacaaattcaaacgacaccgtta 12269565  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttt 787  Q
    | ||||||| ||||||  ||||||||||||| ||||| ||  |||||||||||||||||||| ||| |||||||||    
T  12269566 gataaatttcacctct--ttcacttaatttttttttaattcctttcatgtttagaagttcttctgattctgatttt 12269639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 488 - 789
Target Start/End: Original strand, 25222238 - 25222539
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||  |||||||| | |||||||| ||||||| ||||||| |||| |  ||| ||||  ||| |||||||| ||     |||||||||||||    
T  25222238 ttttctttctttagtacacgtttgagtttttttctagactttagttctcctttttgtacataaatcggatcctatcaaatcattcctaatttgtataatc 25222337  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    ||||||| | |||||||| |||| |||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || |||  ||||||  |     
T  25222338 acttaattagtcaatttagaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccctttttcacaacagag 25222437  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
    ||||||| | | ||||| || ||||||  ||||||| ||   |||||||||||||||| ||||| ||  |||||||||||||| || || ||| | ||||    
T  25222438 gagtgacaaattcaaacaacaccgttatataaatttcac--atctttcacttaatttt-ttttaattcctttcatgtttagaactttttctgattttgat 25222534  T
Q  785 ttttt 789  Q
    |||||    
T  25222535 ttttt 25222539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 590 - 789
Target Start/End: Complemental strand, 42759802 - 42759604
Alignment:
Q  590 taatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgag 688  Q
    |||||| |||||||  |||| |||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||| ||||||   | | |    
T  42759802 taatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaatagagggg 42759703  T
Q  689 tgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttt 787  Q
    |||| | | |||||||| ||||||| ||||  || | |||||||||||||||||| ||||| ||  |||||||||||||| ||||| ||| |||||||||    
T  42759702 tgacaaattcaaacgacaccgttagataaa--ttccatctctttcacttaatttt-ttttaattcctttcatgtttagaacttcttctgattctgatttt 42759606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 789
Target Start/End: Original strand, 9029495 - 9029812
Alignment:
Q  454 ccccacttaaattaaaaaat-tacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatt 552  Q
    |||||||||||| ||||||| || |||||  |||||||| |||  |||||| | || | |||||||| ||||||||| |||| ||||||||||| ||||     
T  9029495 ccccacttaaataaaaaaatatatatgttatttcttttttttt--tcggtatatgtttgagttttttttagactctaattctcctttctagacataaata 9029592  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcat 652  Q
    || |||||||||| || |  ||||||||||||| | |        ||||||| |||| ||||||||| |||||| |||||  ||||||| ||||  |||     
T  9029593 tgttgctatcaaagcagccccaatttgtataattagt--------caatttagaaagttatttcattaaaagaatcacaagtatcattt-ttttccgca- 9029682  T
Q  653 aaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattt 751  Q
         |||||||||| | |||| |||||||   ||||||||  |||||||||| ||||| ||||||||| |||||||||||||||| |  | ||||||||    
T  9029683 -----attcgttttctcctttctcacaacg---gagtgacaaatccaaacgacaccgtttggtaaatttcacctctctttcacttattaattttttattt 9029774  T
Q  752 tgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     ||||||||||||||||||||  ||| | |||||||||    
T  9029775 cgtttcatgtttagaagttctattgattatgatttttt 9029812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 650 - 732
Target Start/End: Original strand, 38599593 - 38599675
Alignment:
Q  650 cataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttc 732  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||| |||||||| ||||||||||||||| | |||||||||    
T  38599593 cataaaccattcgttttcccctttcccacgacgtatgagtggcatttcaaacgacaccgttaggtaaatttcatctctctttc 38599675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 543 - 647
Target Start/End: Complemental strand, 18482600 - 18482495
Alignment:
Q  543 gacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaa-aaagctatttcattgaaagaaccacaacaatcattt 641  Q
    |||| ||||||||||||| ||||| |||  |||||||||||||| |||||||| ||||||||| | || ||||||||||||||||  |||||||| || |    
T  18482600 gacataaatttgatgctaacaaactacccccaatttgtataatcgcttaatcagtcaatttaacacagttatttcattgaaagaataacaacaataatgt 18482501  T
Q  642 cttttt 647  Q
    ||||||    
T  18482500 cttttt 18482495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 617
Target Start/End: Original strand, 12072449 - 12072543
Alignment:
Q  521 tagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttca 617  Q
    |||||| ||||||| |||| | ||||| ||||  ||| ||||||||||   ||||||| |||||||||||||||||||||||||||||| |||||||    
T  12072449 tagactgtagttctcctttttggacaagaattcaatgttatcaaaccat--tcaatttatataatcacttaatcaatcaatttaaaaagttatttca 12072543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 801
Target Start/End: Original strand, 26261446 - 26261504
Alignment:
Q  744 ttttattttgtttcatgtttagaagttcttgtgaatctga-ttttttaatgaagcttag 801  Q
    |||||||| ||||||||||||||||||||| ||| | ||| ||||||||||||||||||    
T  26261446 ttttatttcgtttcatgtttagaagttcttatgattatgatttttttaatgaagcttag 26261504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 803
Target Start/End: Complemental strand, 4264789 - 4264709
Alignment:
Q  722 acctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagct 803  Q
    ||||||||||| |||||| || ||||||||  |||||| ||||||||||||| ||| ||| ||||||| |||||| ||||||    
T  4264789 acctctctttcgcttaatatt-ttttatttcatttcatctttagaagttcttttgattctaattttttgatgaagtttagct 4264709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 722 - 805
Target Start/End: Complemental strand, 24233735 - 24233653
Alignment:
Q  722 acctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||||||| ||||||||| ||| |||| ||| ||||||||||||||||| | | |||||||| |  ||| |||||||||||    
T  24233735 acctctctttcgcttaatttt-tttgatttcgttgcatgtttagaagttcttctaattctgatttgtgtatgtagcttagctac 24233653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 438 - 805
Target Start/End: Original strand, 26633231 - 26633596
Alignment:
Q  438 taagtatgatacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctact 537  Q
    ||||||| ||||||||||| |||||||   |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26633231 taagtataatacccaccccaacttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctact 26633328  T
Q  538 ttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatc 637  Q
    |||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  26633329 ttctggacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 26633428  T
Q  638 atttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcactta 737  Q
    |||||||||| ||||||||||||| |||| || |||||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||    
T  26633429 atttctttttcgcataaaccattcatttttccctttcccacgacgtatgagtgacattccaaacgacaccgttaagtaaatttcacctctctttcactta 26633528  T
Q  738 attttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  26633529 attttattttattttgtttcatgtttagacgttcttctgattctgattttttaatgaagcttagctac 26633596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 446 - 870
Target Start/End: Complemental strand, 36438539 - 36438117
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||||||||| |||||||||||||||||||||| || || || ||| ||||||| ||||| |||| |||||||||||| ||||||||||||||||| |||    
T  36438539 atacccaccctcacttaaattaaaaaattacattttact-ctcttt-tttcttcagtacaggtatgagttttttctaggctctagttctactttctggac 36438442  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| | ||||||||||||||| ||||||||| |||| |||    
T  36438441 ataaatttgatgctatcaaaccactatcaatttgtataatcacttaatcagtcaatttgaaaaaccatttcattgaaagaatcacaacaataatttattt 36438342  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatt 745  Q
    ||  |||||||||||||||||||||||||| || ||||| ||||||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||||    
T  36438341 ttcacataaaccattcgttttcccttttcctacgacgtaggagtgacattccaaatgacaccgttaggtaaatttcacctatctttcacttaattttatt 36438242  T
Q  746 ttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactggtgtctatttta 845  Q
    || |||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||         |||| ||||||||||||||  | ||||||||    
T  36438241 ttgttttgtttcatgtttaaaagttcttctgattctgattttttaatgaagcttagctacacacaaaaattgcatttttattttactgaggcctatttta 36438142  T
Q  846 aaaagagattcgagcctcctatttc 870  Q
    |||| |||  |||||||||||||||    
T  36438141 aaaatagaaccgagcctcctatttc 36438117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 446 - 805
Target Start/End: Complemental strand, 40738180 - 40737832
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||||||||||||||||||||||||||||||||||| | | ||||| ||| |||||||| ||||| ||||||||||| |||||||||||||||| | |||    
T  40738180 atacccacccccacttaaattaaaaaattacatgttacgttttttt-tttattcggtacgcgtatgagttttttctaaactctagttctacttttttgac 40738082  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| |||||         ||||    
T  40738081 ataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaagctattttattgaaagaatcacaa---------cttt 40737991  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatt 745  Q
    || |||||||| |||||||||||| ||||| || ||||| |||||||||| |||| ||| ||||||||||||||| ||||||||||||||| ||||||||    
T  40737990 ttcgcataaactattcgttttcccctttcctacgacgtaggagtgacatttcaaatgacaccgttaggtaaatttcacctctctttcactttattttatt 40737891  T
Q  746 ttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    |||||||||||||| |||| |||||||| ||| ||||| |||||||||||||||||||||    
T  40737890 ttattttgtttcat-tttaaaagttcttttgattctgactttttaatgaagcttagctac 40737832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 468 - 803
Target Start/End: Original strand, 32956670 - 32956998
Alignment:
Q  468 aaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttct-agactctagttctactttctagacaaaaatttgatgctatcaaac 566  Q
    ||||| || ||||| |||||||||||||||||||||||||| | |||||||| | ||||||||||||| |||||| |||| |||| ||||||||||||||    
T  32956670 aaaaaatatatgttacttctttttctttcttcggtacacgtttgagtttttttttagactctagttctcctttctggacataaatctgatgctatcaaac 32956769  T
Q  567 caccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgtttt 666  Q
    ||||  |||||| |||||||| ||||||| |||||||| |||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  32956770 cacccccaatttttataatcatttaatcagtcaatttataaagttatttcattgaaagaatcacaacaatgatttctttttcgcataaaccattcgtttt 32956869  T
Q  667 cccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttag 765  Q
    ||| |||||||||||| ||||||||| | |||||||||| | ||||||||||||| |||| ||||||||         |||| ||| |||||||||||||    
T  32956870 cccctttcccacaacggatgagtgacaaatccaaacgacactgttaggtaaatttcacctatctttcac---------ttttttttggtttcatgtttag 32956960  T
Q  766 aagttcttgtgaatctgattttttaatgaagcttagct 803  Q
    |||||||| ||  | |||||||||||||||||||||||    
T  32956961 aagttcttttggttttgattttttaatgaagcttagct 32956998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 449 - 752
Target Start/End: Original strand, 7366570 - 7366867
Alignment:
Q  449 cccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaa 548  Q
    |||||||||||||||||||||| |||| ||||| ||| |||||      || | |||||||| ||||||||||| |||||||||| ||||||| |||| |    
T  7366570 cccacccccacttaaattaaaatattatatgttactttttttt------tcagcacacgtatgagttttttctatactctagttccactttctggacata 7366663  T
Q  549 aatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt 648  Q
    ||||||||| ||| ||||||||||||||||| ||||| |||||||   ||||||| |||| |||||| |||||||||| ||||||||| ||||||||||     
T  7366664 aatttgatgatattaaaccaccatcaatttgaataattacttaatttgtcaatttgaaaaactattttattgaaagaatcacaacaattatttctttttc 7366763  T
Q  649 gcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatttta 748  Q
    ||||||||||||| ||||||| |||||  | ||||| ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||     
T  7366764 gcataaaccattcattttcccctttcctgcgacgtaggagtgacattccaaacgacaccgtaaggtaaatttcacctctctttcacttaattttattttg 7366863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 502 - 872
Target Start/End: Original strand, 1365939 - 1366310
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||| ||||||||| ||||||| || ||| |||| ||||||| | |||||||||||| | ||||| ||||||| ||||||||| |||||    
T  1365939 tacacgtttgagtttcttctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaat 1366038  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaa 700  Q
    || ||||| |||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||| || | |||||| | ||||    
T  1366039 ttgaaaagttatttcatagaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccacaacggataattgacatattcaaa 1366138  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
     ||| |||||  ||||||| |||||||||||||||||||||| || ||||| |||||||||||| ||| |||| ||| |||||||||||||| |||||||    
T  1366139 tgacaccgtt-tgtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttacaagctcttctgattctgattttttaataaagctta 1366237  T
Q  801 gctacnnnnnnnnnttgcgtttttattttactggtg-tctattttaaaaagagattcgagcctcctatttcat 872  Q
    |||||         || ||||||||||||| ||| | ||||||||||| |||||  ||||||| |||||||||    
T  1366238 gctacacaaaaaaattacgtttttattttattggggatctattttaaatagagagccgagccttctatttcat 1366310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 446 - 699
Target Start/End: Complemental strand, 18895590 - 18895334
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgct---tctttttctttcttcggtacacgtataagttttttctagactctagttctactttcta 542  Q
    ||||||||| ||| |||||||||||||||||||||| ||   | |||||||| ||||| ||||||||| |||||||||||||||| ||||||||||  ||    
T  18895590 atacccacctccatttaaattaaaaaattacatgttactctttttttttcttccttcgatacacgtatgagttttttctagactcgagttctacttatta 18895491  T
Q  543 gacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttc 642  Q
    |||| |||||||||| ||||||||||| || |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||    
T  18895490 gacataaatttgatgttatcaaaccactattaatttgtataatcaattaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaattatttc 18895391  T
Q  643 ttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaa 699  Q
     |||| |||||||| |||||||||||| || || || ||||| ||||||||||||||    
T  18895390 cttttcgcataaacaattcgttttccccttacctacgacgtaggagtgacattccaa 18895334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 483 - 805
Target Start/End: Original strand, 30739033 - 30739358
Alignment:
Q  483 cttctttttctttcttcggtacacgtataagtttt-ttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgta 581  Q
    ||||||||||||| |||||||||||| | |||||| ||||||| || | |||| |||||| |||| ||||  ||||||||||||||| | ||||||| ||    
T  30739033 cttctttttcttttttcggtacacgtttgagtttttttctagattccaattctcctttctggacataaatcggatgctatcaaaccatcttcaattttta 30739132  T
Q  582 taatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaac 681  Q
    |||||||||||||| ||||||| ||||| ||||||||| |||||| |||||| |||||||| |||| |||||||| ||| |||||||| |||  ||||||    
T  30739133 taatcacttaatcagtcaatttgaaaagttatttcattaaaagaatcacaacgatcatttccttttcgcataaacaattagttttcccctttttcacaac 30739232  T
Q  682 gtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcac-ttaattttattttattttgtttcatgtttagaagttcttgtgaat 779  Q
    |   ||||||| | |||||| ||| ||||| ||||||||| ||||||||||||| || ||||||||||||||  |||||||| ||||||||||| ||| |    
T  30739233 ggcggagtgacaaatccaaatgacaccgtttggtaaatttcacctctctttcacttttattttattttatttcatttcatgtatagaagttcttctgatt 30739332  T
Q  780 ctgattttttaatgaagcttagctac 805  Q
    ||||||||||||||||| ||||||||    
T  30739333 ctgattttttaatgaagtttagctac 30739358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 548 - 805
Target Start/End: Complemental strand, 773972 - 773714
Alignment:
Q  548 aaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttt 647  Q
    |||| ||||||||||||| ||||   |||||||||||| |||| |||| ||||||| ||||||||||| |||||||||| |||||||||||||| |||||    
T  773972 aaatctgatgctatcaaatcacccctaatttgtataattactttatcagtcaatttgaaaagctattttattgaaagaatcacaacaatcattttttttt 773873  T
Q  648 --tgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttat 744  Q
      |||||||||||||||||||||| ||||| |||||| | |||| || | | |||||||||||||||||||||||| || |||||||||||||||||| |    
T  773872 tgtgcataaaccattcgttttccc-tttccaacaacggaggagtcacaaattcaaacgacgccgttaggtaaatttcacatctctttcacttaatttt-t 773775  T
Q  745 tttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||| ||||    
T  773774 tttatttcgtttcatgtttagaagttcttctgattttgattttttaatgaagcttaactac 773714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 477 - 801
Target Start/End: Original strand, 41908081 - 41908407
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttct-actttctagacaaaaatttgatgctatcaaaccaccatca 574  Q
    ||||| ||||||||||||||||||||||| || | |||||||| || |||||| ||||| | ||| | |||| |||| ||||||| ||||||||||  ||    
T  41908081 atgttacttctttttctttcttcggtacatgtttgagtttttttcttgactctggttctcattttttggacataaatctgatgctttcaaaccacctcca 41908180  T
Q  575 atttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttc 674  Q
    ||||||| ||||||||||||| ||||||  ||||||| |||||||||||||| |||||||||||||||||||| ||||||| || |||| ||| | |||     
T  41908181 atttgtacaatcacttaatcagtcaattagaaaagctgtttcattgaaagaatcacaacaatcatttctttttcgcataaa-cactcgtattctcctttt 41908279  T
Q  675 ccacaacgtatgagtgaca-ttccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
     ||| ||| | ||||||||  |||||||||   |||||| ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| ||    
T  41908280 tcactacggaggagtgacagatccaaacgatatcgttagataaatttcacctctttttcacttaatttt-ttttattttgtttcatgtttagaagttttt 41908378  T
Q  774 gtgaatctga-ttttttaatgaagcttag 801  Q
     ||| ||||| ||||||||||||||||||    
T  41908379 ctgattctgatttttttaatgaagcttag 41908407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 512 - 805
Target Start/End: Original strand, 42311950 - 42312243
Alignment:
Q  512 agttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagct 611  Q
    |||||||||||||||||| ||||  ||||| |||| |||| ||||| || ||||| ||| || |||||||||||||||| || | ||||||| |||||||    
T  42311950 agttttttctagactctaattctcttttctggacataaatctgatgtta-caaactaccctcgatttgtataatcacttgattagtcaatttgaaaagct 42312048  T
Q  612 atttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtt 710  Q
    |||||||| |||||| ||||||| |||||| ||||| || ||||  |||||||||||| ||| |||||||| ||||| ||| | || ||||||| |||||    
T  42312049 atttcattaaaagaatcacaacagtcatttatttttcgcttaaataattcgttttccccttt-ccacaacggatgagcgacaaatctaaacgacaccgtt 42312147  T
Q  711 aggtaaattttacctctctttcacttaa-ttttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    | |||||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||    
T  42312148 aagtaaatttcacctctctttcacttaattttttttttatttcgtttcatgtttagaagttcttctgattctaattttttaatgaagcttaactac 42312243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 468 - 805
Target Start/End: Complemental strand, 40841414 - 40841073
Alignment:
Q  468 aaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaacc 567  Q
    ||||| || ||||| ||||||||||||||||| ||||| || | |||||||||||||||||| || | |||| | |||| |||| ||||| |||||||||    
T  40841414 aaaaaatatatgtttcttctttttctttcttcagtacatgtttgagttttttctagactctaattattctttttggacataaatatgatgttatcaaacc 40841315  T
Q  568 accatc-aatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgtttt 666  Q
    |||  | |||||||||||| ||||||  |||||||||| |||| ||||  ||| ||||||  |||||| |||||||||||| ||||||||||||||||||    
T  40841314 acctcctaatttgtataattacttaactaatcaatttataaagttattctattaaaagaattacaacactcatttctttttcgcataaaccattcgtttt 40841215  T
Q  667 cccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttag 765  Q
    ||| ||||| |||||| |  |||||| | |||||||||  || ||||| |||||| |||| ||||||| ||| |||| |||||||| |||||||||||||    
T  40841214 cccctttcctacaacggagaagtgacaaatccaaacgagaccattaggaaaatttcacctatctttcaattattttttttttatttcgtttcatgtttag 40841115  T
Q  766 aagttcttgtgaatctga--ttttttaatgaagcttagctac 805  Q
    |||||||| | | |||||  ||||||||| ||||||||||||    
T  40841114 aagttcttctaattctgattttttttaataaagcttagctac 40841073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 456 - 653
Target Start/End: Original strand, 9479015 - 9479208
Alignment:
Q  456 ccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttga 555  Q
    |||||||||||||||||||||||||| ||| |||||||||  |    |||||||| | ||||||||| |||||||||||||||||| |||| ||||||||    
T  9479015 ccacttaaattaaaaaattacatgttacttttttttctttaat----acacgtatgatttttttctaaactctagttctactttctggacataaatttga 9479110  T
Q  556 tgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcata 653  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||| ||||||||| |||||||||| |||||    
T  9479111 tgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaaactatttcgttgaaagaatcacaacaattatttctttttcgcata 9479208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 489 - 871
Target Start/End: Original strand, 33909980 - 33910365
Alignment:
Q  489 tttctttcttcggtacacgtataagtttt-ttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||| |||| |  ||| |||| |||| |||||||| ||||   |||||||||||||     
T  33909980 tttctttcttcggtacacgtttgagtttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatttgtataatcg 33910079  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||| |||||||  | |    
T  33910080 cttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagagg 33910179  T
Q  687 agtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga-- 783  Q
    | | || | |||||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  ||||||||||||||||| || | | |||||      
T  33910180 aattacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttattcttattctgatt 33910276  T
Q  784 -ttttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttca 871  Q
     ||||||||||||| ||||||||         || || |||||||||||| || | ||||||||||||||||  ||||||||||||||||    
T  33910277 tttttttaatgaagtttagctacacaaaaatattacg-ttttattttactaggggcctattttaaaaagagagccgagcctcctatttca 33910365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 467 - 847
Target Start/End: Complemental strand, 41852467 - 41852090
Alignment:
Q  467 aaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaac 566  Q
    |||||| || ||||| ||| ||||||| ||||   ||||||| |  |||||||||||||| ||||||| |||||  ||   |||| || |||||| ||||    
T  41852467 aaaaaaatatatgttacttatttttctctctttaatacacgtttgggttttttctagactttagttctcctttcaggatgtaaatatggtgctataaaac 41852368  T
Q  567 caccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgtttt 666  Q
    |||  || | || |||||||||||| ||| |||||||||| || |||||||||||||||| | ||||| ||||||||||||||||||||  |||| ||||    
T  41852367 cac--tccaattttataatcacttactcagtcaatttaaagagttatttcattgaaagaatcgcaacactcatttcttttttgcataaataattcatttt 41852270  T
Q  667 cccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttag 765  Q
    ||| ||| |||||||| | ||||||| | | |||||||| ||||||| ||||||| || |||||||||||||||||  |||||||| |||| | |||||     
T  41852269 ccccttttccacaacggaggagtgacaaattcaaacgacaccgttagataaatttcacatctctttcacttaattt--ttttatttcgtttgacgtttaa 41852172  T
Q  766 aagttcttgtgaatctgattttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactggtgtctattttaaa 847  Q
    |||||||| ||| |||||||| |||||||| |||||||||         || |||||||||||||| || ||||||||||||    
T  41852171 aagttcttctgattctgatttcttaatgaaacttagctacacaaatcaattacgtttttattttaccggggtctattttaaa 41852090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 483 - 805
Target Start/End: Complemental strand, 3799911 - 3799594
Alignment:
Q  483 cttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtat 582  Q
    |||||||||||||||||  ||| ||| |  |||| || |||| | ||||||| |||||| ||  ||| ||||||||| ||||||||||  ||| ||||||    
T  3799911 cttctttttctttcttcattacgcgtttgggtttcttttagattttagttctcctttctggattaaa-tttgatgct-tcaaaccacctccaaattgtat 3799814  T
Q  583 aatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacg 682  Q
    ||||| ||||| |  ||||||   |||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||||     ||||||||| |    
T  3799813 aatcatttaataagccaattttggaagctatttcattgaaagaatcacaacaatcattt-ttttccgcataaaccattcgttttagaaattcccacaatg 3799715  T
Q  683 tatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctg 782  Q
     | ||| |  | |||||||||| ||||||||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||||| ||| ||||    
T  3799714 gaggagcgcaaatccaaacgacaccgttaggtaaatttcacctctctttcacttaatttt--tttatttcgtttcatgtttagaagttcttctgattctg 3799617  T
Q  783 attttttaatgaagcttagctac 805  Q
    |||||| ||||||| ||||||||    
T  3799616 atttttaaatgaagtttagctac 3799594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 502 - 785
Target Start/End: Complemental strand, 26282676 - 26282391
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||||| || |||  ||| |||| || | |||||||||||||  ||||||||||||||||||||||| |||||    
T  26282676 tacacgtttgagttttttctagactttagttctcctatctgcacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaat 26282577  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgc--ataaaccattcgttttcccttttcccacaacgtatgagtg-acattcca 698  Q
    || |||||||||||||||||||||| |||||||||||||| |||| | |  ||||| ||||| ||||| | ||||||||||| ||| |||| | | | ||    
T  26282576 ttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcatataaatcattcattttctcctttcccacaacatataagtgaaaaataca 26282477  T
Q  699 aacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatt 785  Q
    || ||| | |||| ||||||| |||||||||||||||||||||| || |||||  ||||||||||||||  |||| ||| |||||||    
T  26282476 aatgacactgtta-gtaaattctacctctctttcacttaatttttttgtatttcatttcatgtttagaaactcttctgattctgatt 26282391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 446 - 789
Target Start/End: Complemental strand, 18015772 - 18015428
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||||||||||||||||||| |||||  || |||||   || |||||||||||  ||||| || | ||||||||||||||||||||| | |||| |  ||    
T  18015772 atacccacccccacttaaataaaaaatatatatgttatatccttttctttctttagtacatgtttgagttttttctagactctagttttcctttttgtac 18015673  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    | ||||  ||| |||||||||||||   ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||| |||    
T  18015672 ataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaattattttttt 18015573  T
Q  646 ---tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattt 741  Q
       || |||| ||||||||||||| || |||  ||||||  |  |||||| | | |||||||| ||||| | ||||||| ||  ||||||||||||||||    
T  18015572 ttcttcgcattaaccattcgttttacccttttacacaacagaaaagtgacaaattcaaacgacaccgtttgataaatttcac--ctctttcacttaattt 18015475  T
Q  742 tattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||||| ||  |||||||||||||||||||| | | |||||||||||    
T  18015474 t-ttttaattcctttcatgtttagaagttcttctaattctgatttttt 18015428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 477 - 805
Target Start/End: Complemental strand, 28590301 - 28589976
Alignment:
Q  477 atgttgcttctttttctttcttcggtacac--gtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatca 574  Q
    ||||||||| ||||||||||||| ||| ||  || | ||||||||||||| | ||||| | |||||| |||||||||  ||||||| |||||||||  ||    
T  28590301 atgttgcttttttttctttcttccgtatacatgtttgagttttttctagatt-tagttatcctttctggacaaaaatacgatgctaccaaaccaccccca 28590203  T
Q  575 atttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttc 674  Q
    |||| |||||| ||||||| | | | |||  ||  |||||||||| |||||| ||||||||| |||||||||| || ||| |||||||||||||| ||||    
T  28590202 atttatataattacttaattagttactttttaa--ctatttcattaaaagaatcacaacaattatttctttttcgcgtaa-ccattcgttttcccctttc 28590106  T
Q  675 ccacaacgtatgagtgacat-tccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    |||||||| | ||||||||  ||||||||||   |||||||||| || ||||||||| |||||||||||  | |||||  |||||||||||||| |||||    
T  28590105 ccacaacggaggagtgacaaatccaaacgacattgttaggtaaaattcacctctcttccacttaatttt--tctatttcatttcatgtttagaaattctt 28590008  T
Q  774 gtgaatctgattttttaatgaagcttagctac 805  Q
     ||| |||||||||||||||||| ||||||||    
T  28590007 ctgattctgattttttaatgaagtttagctac 28589976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 597 - 869
Target Start/End: Original strand, 25610091 - 25610362
Alignment:
Q  597 tcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacat-t 695  Q
    ||||||| |||||  ||||||||||||||| ||||||||||||||||||||  ||||||||| | |||||||| |||||||||| | ||  ||||||  |    
T  25610091 tcaatttgaaaagtcatttcattgaaagaatcacaacaatcatttctttttcacataaaccaatagttttcccctttcccacaatggataggtgacaaat 25610190  T
Q  696 ccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaa 795  Q
    ||||||||| ||||||| |||||| || ||||||||||||||||||| || ||||| ||||||||||| |||| |||| ||| |||||||||||||| ||    
T  25610191 ccaaacgacaccgttag-taaattctatctctctttcacttaatttttttgtatttcgtttcatgtttggaagctcttctgattctgattttttaataaa 25610289  T
Q  796 gcttagctacnnnnnnnnnttgcgtttttattttactggtgtctattttaaaaagagattcgagcctcctattt 869  Q
    ||||||||||         |||| ||||||||||| ||| |||||||||||| ||||| |||| |||| |||||    
T  25610290 gcttagctac-aaaaaaaattgcatttttattttattggggtctattttaaatagagagtcgaacctcttattt 25610362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 446 - 789
Target Start/End: Complemental strand, 46221894 - 46221550
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctaga 544  Q
    ||||||||||| |||||||| |||||  || |||||   || |||||||||||  ||| |||| | |||||||| |||||||||||||||  ||| |  |    
T  46221894 atacccacccctacttaaataaaaaatatatatgttatatcattttctttctttagtatacgtttgagtttttttctagactctagttctcttttttgta 46221795  T
Q  545 caaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctt 644  Q
    || ||||   || ||||||||| |||   |||||||| ||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||| ||    
T  46221794 cataaatcgaatcctatcaaactacccctaatttgtagaatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttt 46221695  T
Q  645 t-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaatttt 742  Q
    | || |||||||||||||||||| || ||| |||||||  | || |||| | |||||| ||   |||||| ||||||||||  |||||||||||||||||    
T  46221694 tattcgcataaaccattcgttttaccattttccacaacagaagaatgacaaatccaaatgatatcgttagataaattttac--ctctttcacttaatttt 46221597  T
Q  743 attttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     ||||| ||| |||||||||||||||||||| | | |||||||||||    
T  46221596 tttttaatttctttcatgtttagaagttcttctaattctgatttttt 46221550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 559 - 789
Target Start/End: Complemental strand, 12251365 - 12251135
Alignment:
Q  559 tatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaacc 657  Q
    ||||||||||||   ||||| |||||||| ||||||| |||||||  ||||||||||||||||||||| |||||||||||||| ||| || |||||||||    
T  12251365 tatcaaaccacccctaatttctataatcatttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaacc 12251266  T
Q  658 attcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgttt 756  Q
    ||||||||| || ||| |||||||  | ||||||| | |||||||| | ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  |||    
T  12251265 attcgttttacccttttccacaacagaggagtgacaaatccaaacgtcaccgttagataaatttcac--ctctttcacttaatttttttttaattccttt 12251168  T
Q  757 catgtttagaagttcttgtgaatctgatttttt 789  Q
    ||||||||||||||||| ||| |||||||||||    
T  12251167 catgtttagaagttcttctgattctgatttttt 12251135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 502 - 872
Target Start/End: Complemental strand, 40001830 - 40001474
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | || |||||||||||| ||||||| || |||  ||| |||| || | |||||||||||||  ||||||||||||||||||||||| |||||    
T  40001830 tacacgtttgaggtttttctagactttagttcttctatctgaacataaatctggtactatcaaaccacctccaatttgtataatcacttaatcagtcaat 40001731  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||||||||||| ||||||||||               |||||||||||||| || |||||||||||| || |||||| | | ||||    
T  40001730 ttgaaaagctatttcattgaaagaatcacaacaatc---------------aaaccattcgtttttccctttcccacaacggataagtgacaaattcaaa 40001646  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    ||||||||||| |||||||  ||||||||||||||||||||| || ||||| |||||||||||||||| |||| | | |||  |||| |||| |||||||    
T  40001645 cgacgccgtta-gtaaattccacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctaattctatttttctaataaagctta 40001547  T
Q  801 gctacnnnnnnnnnttgcgtttttattttactgg-tgtctattttaaaaagagattcgagcctcctatttcat 872  Q
     ||||         |||| ||||||||||| |||    |||||||||| ||||| |||| |||||||||||||    
T  40001546 actacacaaaaaaattgcatttttattttattggaaacctattttaaatagagagtcgaacctcctatttcat 40001474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 489 - 789
Target Start/End: Complemental strand, 36796520 - 36796219
Alignment:
Q  489 tttctttcttcggtacacgtataagttttttctagact-ctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    ||||||||||  |||||||| | ||||||||||||||| |||||||| |||| |  ||| ||||  ||| ||||||||| ||| | |||||||||||| |    
T  36796520 tttctttctttagtacacgtttgagttttttctagacttctagttctcctttttgtacataaatcggatcctatcaaactacccttaatttgtataataa 36796421  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt--tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    |||||||| |||||||  |||  |||||||||||||||| |||||||||||||| |||  || |||||||||||||||||| || ||| |||||||  |     
T  36796420 cttaatcagtcaatttggaaaattatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttacccttttccacaacagag 36796321  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
    ||||||| | || ||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  |||| ||||||||| ||||| ||| ||||||    
T  36796320 gagtgacaaatcaaaacgacaccgttagataaatttcac--ctctttcacttaatttttttttaattcatttc-tgtttagaacttcttctgattctgat 36796224  T
Q  785 ttttt 789  Q
    |||||    
T  36796223 ttttt 36796219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 514 - 789
Target Start/End: Complemental strand, 6380206 - 6379932
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||||||||||| |||| |  |||  ||| |||| |||||||||||||   ||||||||||||||||||||||||||||||  ||  ||||    
T  6380206 ttttttctagactctagttcttctttttgtacatgaatctgatcctatcaaaccacccctaatttgtataatcacttaatcaatcaatttggaagtctat 6380107  T
Q  614 ttcattgaaagaaccacaacaatcat-ttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||| || || || |||||||||||||||||| || ||| |||||||  | ||||||| | ||||||||||   |||     
T  6380106 ttcattgaaagaatcacaacaatcatatttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacgacattgttg 6380007  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||||||| ||  ||||||||||||||||| ||||| ||  |||||| |||||||||||||  || |||||||||||    
T  6380006 gataaatttcac--ctctttcacttaatttt-ttttaattcctttcatatttagaagttctttcgattctgatttttt 6379932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 453 - 789
Target Start/End: Complemental strand, 42161306 - 42160970
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaat 551  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  |||||||| | |||||||| |||||||||| ||||  ||| |  ||| ||||    
T  42161306 cccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctaattctcatttttgtacataaat 42161207  T
Q  552 ttgatgc--tatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttg 649  Q
    | ||| |  ||||||||||||   ||||||||||||||||| |||| | |||||  ||||||||||||||||||||| |||| ||| || || || || |    
T  42161206 tggatcctatatcaaaccacccctaatttgtataatcacttgatcagttaatttggaaagctatttcattgaaagaatcacagcaa-caatttttcttcg 42161108  T
Q  650 cataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttatttta 748  Q
    ||||||||||||||||| |||||| |||||||  | ||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||| |||||    
T  42161107 cataaaccattcgttttacctttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttt-tttta 42161011  T
Q  749 ttttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     ||  ||||||||||||||||| || ||| |||||||||||    
T  42161010 attcctttcatgtttagaagttattctgattctgatttttt 42160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 454 - 789
Target Start/End: Complemental strand, 33419301 - 33418964
Alignment:
Q  454 ccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatt 552  Q
    |||||||||||| |||||  || |||||   || |||||||||||   ||||||| | |||||||| |||||||||||||||  ||| |  ||| ||||     
T  33419301 ccccacttaaataaaaaatatatatgttatatccttttctttctttaatacacgtttgagtttttttctagactctagttcttgtttttgtacataaatc 33419202  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaa-tcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgc 650  Q
     ||| ||||||||| |||   |||||||||||||||||||| || ||||||| ||||| |||||||||||||||| ||||| |||||||| ||| || ||    
T  33419201 ggatcctatcaaactacccctaatttgtataatcacttaattaagtcaatttgaaaagttatttcattgaaagaatcacaataatcatttttttcttcgc 33419102  T
Q  651 ataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttat 749  Q
    |||||||||||||||| || ||| | |||||  | ||||||| | |||||||||| ||||||| ||||||| ||  |||||||||||| |||| |||||     
T  33419101 ataaaccattcgttttaccattttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttattttttttttaa 33419004  T
Q  750 tttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    ||   ||||||||||||| ||||| ||| |||||||||||    
T  33419003 ttccattcatgtttagaacttcttctgattctgatttttt 33418964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 552 - 872
Target Start/End: Complemental strand, 44876238 - 44875922
Alignment:
Q  552 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgca 651  Q
    ||||| |||||||||| | | |||||| || ||||| ||||||| |||||||| |||||||||||||| |||||| |||||||||||||| ||||  |||    
T  44876238 ttgatactatcaaaccgc-accaatttttaaaatcatttaatcagtcaatttagaaagctatttcattaaaagaatcacaacaatcattt-ttttccgca 44876141  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaa-ttttattttat 749  Q
    |||||||||||||||||||||  |||||| | | ||||||| | ||||||||||  | |||||||||||| | ||||||||||||||| |||| ||||||    
T  44876140 taaaccattcgttttcccttt--ccacaatgaaggagtgacaaatccaaacgac-actttaggtaaatttcatctctctttcacttaattttttttttat 44876044  T
Q  750 tttgtttcatgtttagaagttcttgtgaatctga-ttttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaa 847  Q
    ||  ||||||||||||||||||||   | ||||| ||||||||||||| ||||||||          | | ||||||||||| | ||   ||||||||||    
T  44876043 ttcatttcatgtttagaagttctt---attctgatttttttaatgaagtttagctacaaaaataaaatacatttttattttagtagggacctattttaaa 44875947  T
Q  848 aagagattcgagcctcctatttcat 872  Q
    |||||| ||||||||||||||||||    
T  44875946 aagagagtcgagcctcctatttcat 44875922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 485 - 805
Target Start/End: Complemental strand, 7636483 - 7636153
Alignment:
Q  485 tctttttctttcttcggtacacgtataagtttttt------ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaattt 578  Q
    ||||||||||| |||||||||||| ||||||||||      |||||||||| |||| | || |  ||| || | |||| |||||||||||||   |||||    
T  7636483 tctttttcttttttcggtacacgtttaagtttttttttcttctagactctacttctcccttttgtacataactctgatcctatcaaaccacccctaattt 7636384  T
Q  579 gtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt--tttgcataaaccattcgttttcccttttccc 676  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||| | |||||||||||| |||  ||  ||||| ||||||||||| || ||| ||    
T  7636383 gtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcgcaacaatcattttttttcttcccataagccattcgttttacccttttcc 7636284  T
Q  677 acaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaa-ttttattttattttgtttcatgtttagaagttcttg 774  Q
    |||||  | ||||||| | | |||||||  ||||||| ||||||| ||  || |||||||||| |||| ||||| ||  ||||||||||||||||| ||     
T  7636283 acaacagaagagtgacaaattcaaacgataccgttagataaatttcac--ctttttcacttaattttttttttaattcctttcatgtttagaagttgttc 7636186  T
Q  775 tgaatctgatttttt--aatgaagcttagctac 805  Q
    ||| |||||||||||  ||||||| ||||||||    
T  7636185 tgattctgatttttttcaatgaagtttagctac 7636153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 514 - 789
Target Start/End: Complemental strand, 44894151 - 44893877
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||| ||||||| |||| |  ||| ||||  ||| |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||    
T  44894151 ttttttctagactatagttcttctttttgtacataaatcggatcctattaaaccacccctaatttgtataatcacttaatcaatcaatttggaaagctat 44894052  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    || |||||||||| |||||||||||||| ||| ||  ||||||||||||||||| || ||| ||||| |  | |||| || | | |||||||| ||||||    
T  44894051 tttattgaaagaatcacaacaatcatttttttcttcacataaaccattcgttttacccttttccacagcaaaggagttacaaattcaaacgacaccgtta 44893952  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
      ||||||| ||  ||||||||||||||||| ||||| ||  ||||||| ||| || ||||| ||| | |||||||||    
T  44893951 cataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgcttacaacttcttctgattatgatttttt 44893877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 446 - 666
Target Start/End: Original strand, 4099840 - 4100063
Alignment:
Q  446 atacccacc-cccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt--ctagactctagttctactttcta 542  Q
    ||||||||| ||||||||||| |||||  || |||||   || |||||||||||  |||||||| | ||||||||  |||||| ||| |||| |||| |     
T  4099840 atacccacctcccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagacgctaattctcctttttg 4099939  T
Q  543 gacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttc 642  Q
     ||| ||||  ||| |||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||     
T  4099940 tacataaatcggat-ctatcaaaccacccctaatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaattacaacaatcatttt 4100038  T
Q  643 ttt-tttgcataaaccattcgtttt 666  Q
    ||| || ||| ||||||||||||||    
T  4100039 tttcttcgcaaaaaccattcgtttt 4100063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 477 - 626
Target Start/End: Original strand, 25061809 - 25061957
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaat 576  Q
    ||||| |||||||||||||||||||||||||| | | |||||| |||||||||||||| |||| | |||| |||| |||||||||||||| |   |||||    
T  25061809 atgttacttctttttctttcttcggtacacgttttaatttttt-tagactctagttcttctttttggacataaatctgatgctatcaaactattctcaat 25061907  T
Q  577 ttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaa 626  Q
    ||||| |||||||| |||| | ||||| ||||||||||||||||||||||    
T  25061908 ttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 25061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 453 - 773
Target Start/End: Original strand, 11672464 - 11672786
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaa--a 549  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  |||||| | | |||||||| ||||||||||||||| |||| |  ||| |  |    
T  11672464 cccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacatataa 11672563  T
Q  550 atttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-ttt 648  Q
    ||  ||| ||||||||||||    |||||||||||||||||||||| |||||||  |||| ||||||| |||||||| |||||||||||||| ||| ||     
T  11672564 atcggatcctatcaaaccactcctaatttgtataatcacttaatcagtcaatttggaaagttatttcaatgaaagaatcacaacaatcatttttttcttc 11672663  T
Q  649 gcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttatttt 747  Q
    ||||||| |||||||||| |  ||| |||||||  | ||||||| | || |||||||  |||| | ||||||| ||  ||||||||||||||||| ||||    
T  11672664 gcataaatcattcgttttactcttttccacaacagaggagtgacaaatctaaacgacatcgtttgataaatttcac--ctctttcacttaatttt-tttt 11672760  T
Q  748 attttgtttcatgtttagaagttctt 773  Q
    | ||  |||||||||||||| |||||    
T  11672761 aattcctttcatgtttagaacttctt 11672786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 450 - 639
Target Start/End: Complemental strand, 8358481 - 8358291
Alignment:
Q  450 ccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttt-tctagactctagttctactttctagacaaa 548  Q
    |||||| ||||||||| |||||  || |||||   || |||||||||||  ||| |||| | ||||||| |||||||| ||||||| |||| |  ||| |    
T  8358481 ccaccctcacttaaataaaaaatatatatgttatatcattttctttctttagtatacgtttgagtttttctctagactttagttctcctttttgtacata 8358382  T
Q  549 aatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcat 639  Q
    |||  ||| |||||||||||||   ||||| |||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||||    
T  8358381 aatcggatcctatcaaaccacccctaatttatataatcacttaatcagtcaatttaaaaagttatctcattgaaagaatcacaacaatcat 8358291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 697 - 872
Target Start/End: Complemental strand, 29731021 - 29730852
Alignment:
Q  697 caaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaag 796  Q
    |||||||| | ||||||||||||| |||||||||||||| |||||| ||||     |||||||||||||||||| || ||| | |||||||||||||||     
T  29731021 caaacgacactgttaggtaaatttcacctctctttcact-aatttttttttc----gtttcatgtttagaagtttttctgattgtgattttttaatgaaa 29730927  T
Q  797 cttagctacnnnnnnnnnttgcgtttttattttactggtgtc-tattttaaaaagagattcgagcctcctatttcat 872  Q
    |||||||||         ||   ||||||||||||||| | | ||||||||||||||| ||||||||||||||||||    
T  29730926 cttagctacaaaaaaaaatta--tttttattttactgggggcctattttaaaaagagagtcgagcctcctatttcat 29730852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 697 - 872
Target Start/End: Original strand, 29741926 - 29742095
Alignment:
Q  697 caaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaag 796  Q
    |||||||| | ||||||||||||| |||||||||| ||| |||||| ||||     |||||||||||||||||| || ||| | |||||||||||||||     
T  29741926 caaacgacactgttaggtaaatttcacctctcttttact-aatttttttttc----gtttcatgtttagaagtttttctgattgtgattttttaatgaaa 29742020  T
Q  797 cttagctacnnnnnnnnnttgcgtttttattttactggtgtc-tattttaaaaagagattcgagcctcctatttcat 872  Q
    |||||||||         |||  ||||||||||||||| | | ||||||||||||||| ||||||||||||||||||    
T  29742021 cttagctacaaaaaaaaattg--tttttattttactgggggcctattttaaaaagagagtcgagcctcctatttcat 29742095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 519 - 617
Target Start/End: Complemental strand, 2445889 - 2445795
Alignment:
Q  519 tctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttca 617  Q
    |||||||||||||||  |||| |  |||| ||||||||||||||||||||   ||||||||||||||||||||||| ||||| |||||| | |||||||    
T  2445889 tctagactctagttc--ctttttttacaagaatttgatgctatcaaaccat--tcaatttgtataatcacttaatctatcaaattaaaaggttatttca 2445795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 744 - 805
Target Start/End: Complemental strand, 44002825 - 44002764
Alignment:
Q  744 ttttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||||  |||||||||||||||||||| ||| | | |||||||||||||||||||||||    
T  44002825 ttttatttcatttcatgtttagaagttcttctgattataattttttaatgaagcttagctac 44002764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 707 - 773
Target Start/End: Original strand, 21145491 - 21145555
Alignment:
Q  707 cgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    |||||||||||||| ||||| ||||||||||||||  |||||||| ||||||||| || ||||||||    
T  21145491 cgttaggtaaatttcacctccctttcacttaattt--ttttatttcgtttcatgtataaaagttctt 21145555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 539
Target Start/End: Complemental strand, 12251579 - 12251485
Alignment:
Q  446 atacccaccc-ccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctacttt 539  Q
    |||||||||| |||||||||| |||||  || |||||   || |||||||||||  |||||||| | ||||||||||||||||||||||| ||||    
T  12251579 atacccaccctccacttaaataaaaaatatatatgttatctcattttctttctttagtacacgtttgagttttttctagactctagttctccttt 12251485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 785
Target Start/End: Original strand, 4100112 - 4100170
Alignment:
Q  726 ctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatt 785  Q
    ||||||||||||||||| ||||| ||  |||||||||||||||||||| ||| |||||||    
T  4100112 ctctttcacttaatttt-ttttaattcctttcatgtttagaagttcttctgattctgatt 4100170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 872
Target Start/End: Complemental strand, 40737816 - 40737761
Alignment:
Q  817 gcgtttttattttactggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    |||||||||||||||| |  ||||||||||||| |||  |||||||||||||||||    
T  40737816 gcgtttttattttactcgaatctattttaaaaatagaaccgagcctcctatttcat 40737761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 747 - 805
Target Start/End: Original strand, 28105789 - 28105847
Alignment:
Q  747 tattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||| |||||||||||| ||||| || ||| ||| |||| ||||||||||||||||||    
T  28105789 tatttcgtttcatgtttaaaagtttttctgattctaatttcttaatgaagcttagctac 28105847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 837 - 871
Target Start/End: Complemental strand, 44893825 - 44893791
Alignment:
Q  837 tctattttaaaaagagattcgagcctcctatttca 871  Q
    ||||||||||||||||| |||||||||||||||||    
T  44893825 tctattttaaaaagagagtcgagcctcctatttca 44893791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 446 - 872
Target Start/End: Original strand, 46904607 - 46905043
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  46904607 atacccacccccacttaaattaaaaaattacatgttacttttttttctt-cttcggtacatgtatgagttttttctagactctagttctactttctagac 46904705  T
Q  546 aa----------aaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaa 635  Q
    |           | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||    
T  46904706 atttctggacatagatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaatcacaacaa 46904805  T
Q  636 tcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcact 735  Q
    | |||||||||||||||||||| ||  |||| || ||||| || ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  46904806 ttatttcttttttgcataaaccttttatttttccctttcctacgacgtaggagtgacattccaaacgacaccgttaggtaaatttcacctctctttcact 46904905  T
Q  736 taattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac-nnnnnnnnnttgcgtttttattttactgg 834  Q
    |||||||||||| |||||||||||||||| |||||||| | | ||||||||||||||||||||| |||||          |||  |||||||||||||||    
T  46904906 taattttattttgttttgtttcatgtttaaaagttcttcttattctgattttttaatgaagcttcgctacacataaaaaattgaatttttattttactgg 46905005  T
Q  835 tgtctattttaaaaagagattcgagcctcctatttcat 872  Q
       |||||||||||| |||  |||||||||||||||||    
T  46905006 aacctattttaaaaatagaaccgagcctcctatttcat 46905043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 452 - 872
Target Start/End: Original strand, 7766943 - 7767367
Alignment:
Q  452 acccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt--ctagactctagttctactttctagacaaaa 549  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||  |||||||||| ||||||||  |||||||| ||||||||||||| |||| ||    
T  7766943 acccccacttaaattaaaaaattacatgttactt-tttttctt-ctttagtacacgtatgagttttttttctagactccagttctactttctggacataa 7767040  T
Q  550 atttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttg 649  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||| |||||      
T  7767041 atttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaattatttttttttct 7767140  T
Q  650 ---cataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattt 746  Q
       ||||||| |||||||||||| ||||| |  ||||| ||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||||||    
T  7767141 tcacataaactattcgttttcccatttcctaagacgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttattt 7767240  T
Q  747 tattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac-nnnnnnnnnttgcgtttttattttactggtgtctatttta 845  Q
    |||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||           ||||||||||| ||||| | | ||||||||    
T  7767241 tattttgtttcatgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacaaaaaaatgcgtttttatcttacttgggcctatttta 7767340  T
Q  846 aaaagagattcgagcctcctatttcat 872  Q
    |||| |||  |||||||||||||||||    
T  7767341 aaaatagaaccgagcctcctatttcat 7767367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 488 - 800
Target Start/End: Original strand, 27303103 - 27303413
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    |||| ||||||| | ||||||||  ||||||||||||||||| ||||||||| | |||| ||||||||||| || |||||||||||||||||||||||||    
T  27303103 ttttttttcttcaggacacgtatgtgttttttctagactctacttctactttatggacataaatttgatgccatgaaaccaccatcaatttgtataatca 27303202  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatga 687  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||| ||| |||||||| ||||| || ||||| ||    
T  27303203 cttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaattatttctttttcgcataaactatttgttttccc-tttcctacgacgtagga 27303301  T
Q  688 gtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttt 787  Q
    |||||||| |||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||||||||    
T  27303302 gtgacatt-caaacgacaccattaggtaaatttcacctctctttcacttaattttattttgttttgtttcatgtttaaaagttcttctgattctgatttt 27303400  T
Q  788 ttaatgaagctta 800  Q
    |||||||||||||    
T  27303401 ttaatgaagctta 27303413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 452 - 742
Target Start/End: Complemental strand, 42009443 - 42009156
Alignment:
Q  452 acccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaat 551  Q
    |||||||||||||||||||||||| || |   | |||||| |||||||   |||||||| |||||||| |||||| |||||||||||||| |||| ||||    
T  42009443 acccccacttaaattaaaaaattatattt---tactttttttttcttcatgacacgtatgagttttttttagactttagttctactttctggacataaat 42009347  T
Q  552 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgca 651  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||  ||    
T  42009346 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaattatttctttttcaca 42009247  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaatttt 742  Q
    |||||||||||||||||| ||||| || ||||| ||||||||||||||||||   |||||| ||||||| |||||||||||||||| ||||    
T  42009246 taaaccattcgttttcccctttcctacgacgtaagagtgacattccaaacgaaatcgttagataaatttcacctctctttcacttagtttt 42009156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 450 - 805
Target Start/End: Original strand, 51146818 - 51147170
Alignment:
Q  450 ccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaa 548  Q
    ||||| ||||||||||||||||||||||||||  ||  ||||||| ||||| ||||||||| |||||||| ||||| |||||||| ||||| | |||| |    
T  51146818 ccacctccacttaaattaaaaaattacatgttattt--ttttctt-cttcgttacacgtatgagtttttttctagattctagttccactttttggacata 51146914  T
Q  549 aatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt 648  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||| |||||| |||||||||| ||||||||| |||| || | |    
T  51146915 aatttgatgctattaaaccaccatcaatttgaata-tcacttaatcagtcaatttaaaaaactattttattgaaagaatcacaacaattattttttctct 51147013  T
Q  649 -gcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatttt 747  Q
     ||||||||||||||||||||||||||  || || ||  |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  51147014 cgcataaaccattcgttttcccttttct-acgacatagaagtgacattccaaacgacaccgttaggtaaattttatctctctttcacttcattttatttt 51147112  T
Q  748 attttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
     ||||||||| ||||||  ||||||| ||| | |||||||||||||||||||| ||||    
T  51147113 gttttgtttcgtgtttaagagttcttctgattatgattttttaatgaagcttacctac 51147170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 456 - 763
Target Start/End: Complemental strand, 50677492 - 50677187
Alignment:
Q  456 ccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttga 555  Q
    |||||||||||||||||||||||||| ||| |||||||  |||||| |||| |||  |||||| ||||||| ||||| |||||||| ||||||||||||     
T  50677492 ccacttaaattaaaaaattacatgttacttttttttct--cttcgggacacatatgggtttttcctagactttagttatactttctggacaaaaatttgt 50677395  T
Q  556 tgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaa 655  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| || ||||||||| |||||||||| |||||||    
T  50677394 tgttatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaacaatcacaacaattatttctttttcgcataaa 50677295  T
Q  656 ccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtt 755  Q
    | |||||||||||| ||||| || | ||| ||||||||||||||||||  | ||||| ||||||| | |||||||||||||   |||||||| |||| ||    
T  50677294 caattcgttttcccctttcctacgatgtaggagtgacattccaaacgaaactgttagataaatttcatctctctttcactttgctttattttgttttatt 50677195  T
Q  756 tcatgttt 763  Q
    ||||||||    
T  50677194 tcatgttt 50677187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 446 - 713
Target Start/End: Complemental strand, 36538373 - 36538109
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||||||||| ||||||||| ||||||||||||||| ||| ||||||   ||||  ||||||||| ||||||||||| ||||||||| |||||| | |||    
T  36538373 atacccaccctcacttaaataaaaaaattacatgttacttttttttc---cttcactacacgtatgagttttttctaaactctagttatactttatggac 36538277  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| ||||||||| ||||||||    
T  36538276 ataaacttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaattatttcttt 36538177  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttagg 713  Q
    || ||||||||||||||||||||| ||||| || | | | ||||||||||| |||||| || ||||||    
T  36538176 ttcgcataaaccattcgttttcccctttcctacgaagcaggagtgacattctaaacgatgctgttagg 36538109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 467 - 872
Target Start/End: Complemental strand, 40152299 - 40151895
Alignment:
Q  467 aaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaac 566  Q
    |||||| || ||||| ||||||||| |||||||||||||||| | |||||||| ||||||||| |||| |||| |||||| | || |||||||| ||||     
T  40152299 aaaaaaatatatgttacttctttttttttcttcggtacacgtttgagttttttttagactctaattcttctttttagacatagatctgatgctaccaaat 40152200  T
Q  567 caccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaa-gaaccacaacaatcatttcttttttgcataaaccattcgttt 665  Q
    || |  ||||||||||||||||||||||  ||||||| |||| |||||||||| ||| ||| |||||||||||||||||||  |||||||||||| | ||    
T  40152199 catccccaatttgtataatcacttaatcggtcaatttgaaaaactatttcattaaaacgaatcacaacaatcatttcttttgcgcataaaccatttg-tt 40152101  T
Q  666 tcccttttcccacaacgtatgagtgaca-ttccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgttta 764  Q
    |||| |||||||||||| | || ||| |  ||||||| || || |||||||||||| |||||||||||| |||||||| |||||||| ||||||| ||||    
T  40152100 tcccctttcccacaacggaggaatgatacatccaaacaacacctttaggtaaatttcacctctctttcatttaatttt-ttttatttcgtttcatattta 40152002  T
Q  765 gaagttcttgtgaatctgattttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactggtgtctattttaaaaagagattcgagcctcc 864  Q
     ||||| || ||| |||||||||||||||||||||| ||||         ||   |||||||||||  || |||||||||||||||||| ||||||||||    
T  40152001 aaagtttttatgattctgattttttaatgaagcttaactacacaaaacaattatatttttatttta-gggagtctattttaaaaagagagtcgagcctcc 40151903  T
Q  865 tatttcat 872  Q
    ||||||||    
T  40151902 tatttcat 40151895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 454 - 804
Target Start/End: Original strand, 21596219 - 21596566
Alignment:
Q  454 ccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaattt 553  Q
    |||||||||||| |||||||||  ||||  ||||||| |||| |||| ||||||| |  ||||||||||||||||| |||| |||||| |||| ||||      
T  21596219 ccccacttaaataaaaaaatta--tgttatttcttttacttttttcgttacacgtttgcgttttttctagactctaattctcctttctggacataaatca 21596316  T
Q  554 gatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcata 653  Q
    ||||||||||||||||   ||||||||||||||||||||||| || ||||  ||||||||||||||  ||||| |||||||||||||| ||||||||  |    
T  21596317 gatgctatcaaaccactcccaatttgtataatcacttaatcagtcgatttggaaagctatttcattacaagaatcacaacaatcatttattttttgctca 21596416  T
Q  654 aaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatttt 752  Q
    ||||||| ||||| || ||| |||||| | | ||||||| |   |||||||||| ||||||||||||| |  | ||||||| |||||| | |||||||      
T  21596417 aaccatttgtttttcccttt-ccacaatggaggagtgacaaaatcaaacgacgctgttaggtaaatttcatttttctttcatttaattct-ttttattac 21596514  T
Q  753 gtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagcta 804  Q
     |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  21596515 atttcatgtttagaagttcttttgattctgattttttaatgaagcttagcta 21596566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 446 - 789
Target Start/End: Complemental strand, 23164762 - 23164420
Alignment:
Q  446 atacccacccc-cacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctaga 544  Q
    ||||||||||| ||||||||| ||||||| | |||||   || |||||||| ||| |||||||| | ||||||||||||||||||||||| |||| |  |    
T  23164762 atacccacccctcacttaaataaaaaaat-atatgttatatccttttcttttttcagtacacgtttgagttttttctagactctagttctcctttttgta 23164664  T
Q  545 caaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctt 644  Q
    || |||| |||| |||||||||||||   ||||||||||||||||||||||||||||||  ||  ||||||||||||||||| ||||||||| |||| ||    
T  23164663 cataaatctgatcctatcaaaccacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaataatttttt 23164564  T
Q  645 t-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaatttt 742  Q
    | || |||||||||||||||||| |||||| |||||||  | ||||||| | |||||||||| ||||| | ||||||| ||  |||||||||||||||||    
T  23164563 tcttcgcataaaccattcgttttacctttttccacaacagaggagtgacaaatccaaacgacaccgttggataaatttcac--ctctttcacttaatttt 23164466  T
Q  743 attttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     ||||| ||  |||||| ||||||||||||| ||| ||| |||||||    
T  23164465 -ttttaattcttttcatatttagaagttcttctgattctaatttttt 23164420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 502 - 872
Target Start/End: Complemental strand, 48627163 - 48626792
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| |||||||  | ||| |||| |||| |||| |||||| ||||||  |||||||||||||||||| |||| |||||    
T  48627163 tacacgtttgagttttttctagactttagttctcatatctggacataaatctgatactatcagaccaccgccaatttgtataatcacttgatcagtcaat 48627064  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||| ||||||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||  |||||||| || || |||||| | ||||||    
T  48627063 ttgaaaatctatttcattgaaagaatcacaacaatcatttatttttcacataaaccattcgttttccc-attcccacagcggataagtgacaaatccaaa 48626965  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattt-tattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctt 799  Q
     ||| | |||| ||||||| ||||||||||||||||| |||| ||| ||||| |||||||||||||||| |||| ||| ||| ||||||| || ||| ||    
T  48626964 tgacactgtta-gtaaattctacctctctttcacttatttttttttgtatttcgtttcatgtttagaagctcttctgattctaatttttttataaagttt 48626866  T
Q  800 agctacnnnnnnnnnttgcgtttttattttactg-gtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    | ||||         |||||||||||||||| ||   | |||||||||| |||||  |||||||||||||||||    
T  48626865 aactacacaaaaaaattgcgtttttattttattgaaggcctattttaaatagagaaccgagcctcctatttcat 48626792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 514 - 805
Target Start/End: Complemental strand, 28132857 - 28132566
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||||||||||| |||| |  ||| ||||  ||| |||||||| |||| | |||||||||||||||||||||| |||||||  ||||||||    
T  28132857 ttttttctagactctagttctcctttttgtacataaatcagatcctatcaaatcacccttaatttgtataatcacttaatcagtcaatttggaaagctat 28132758  T
Q  614 ttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttag 712  Q
    ||||||||||||| |||||||||||||| || || |||||||||||||||||| || ||| |||||||  | ||||||| | | ||||||||||||||||    
T  28132757 ttcattgaaagaatcacaacaatcattttttcttcgcataaaccattcgttttaccattttccacaacagaggagtgacaagttcaaacgacgccgttag 28132658  T
Q  713 gtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatt--ttttaatgaagcttagctac 805  Q
     ||||||| ||  ||||||||||||||||| ||||| ||  |||||||||||||||||||| ||| | |||||  ||||||||||  ||||||||    
T  28132657 ataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttcttctgattttgatttcttttaatgaaatttagctac 28132566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 453 - 789
Target Start/End: Complemental strand, 51939739 - 51939403
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatt 552  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  || ||||| | |||||||||||||||||||||||  ||| |  ||| ||||     
T  51939739 cccccacttaaataaaaaatatatatgttatatccttttctttctttagtccacgtttgagttttttctagactctagttctcttttttgtacataaatc 51939640  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt--tttgc 650  Q
     ||| |||||||||||||   |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| |||  ||  |    
T  51939639 agatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcac 51939540  T
Q  651 ataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttat 749  Q
    |||||||||||||||| || ||| ||||||| ||  |||||| | |||||||||| | ||| | ||||||| ||  ||||||||||||||||| |||||     
T  51939539 ataaaccattcgttttacccttttccacaacatagaagtgacaaatccaaacgacacagttggttaaatttcac--ctctttcacttaatttt-ttttaa 51939443  T
Q  750 tttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    ||  |||||||||||||||||||| | | |||||||||||    
T  51939442 ttcctttcatgtttagaagttcttctcattctgatttttt 51939403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 501 - 789
Target Start/End: Complemental strand, 21784919 - 21784627
Alignment:
Q  501 gtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaa 600  Q
    |||||||| | ||||||||||||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   |||||||||||||||||||||| | ||    
T  21784919 gtacacgtttgagttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagttaa 21784820  T
Q  601 tttaaaaagctatttcattgaaagaaccacaacaatcatttcttt--tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attcc 697  Q
    |||  ||||||||||||||||||||| |||||||||||||| |||  || |||||||||||||||||| || ||| |||||||  | ||||||| | |||    
T  21784819 tttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatcc 21784720  T
Q  698 aaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgt----ttagaagttcttgtgaatctgatttttt 789  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||||| ||||| ||  ||||||||    |||||||||||| ||| |||||||||||    
T  21784719 aaacgacgccgttagataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttaattagaagttcttttgattctgatttttt 21784627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 488 - 805
Target Start/End: Complemental strand, 25599236 - 25598912
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttct--agactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataat 585  Q
    |||||||||||| ||||| || | |||||||| |  ||||||||||||| |||| |  ||| |||| |||| |||||||||||||   ||||| ||||||    
T  25599236 ttttctttcttcagtacaggtttgagttttttttttagactctagttctcctttttgtacataaatctgattctatcaaaccacctctaatttatataat 25599137  T
Q  586 cacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    |||||||||| ||||||| |||| ||||||||||||||||| |||||||||||| | || || |||||||||||||||||| || ||| |||||||  |     
T  25599136 cacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcatgttttcttcgcataaaccattcgttttacccttttccacaacagag 25599037  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaa----ttttattttattttgtttcatgtttagaagttcttgtgaatc 780  Q
    ||||||| | | |||||||| ||||||| ||||||| ||  |||||||||||||    |||| ||||| ||| |||||||||||||||||||| ||| ||    
T  25599036 gagtgacaaattcaaacgacaccgttagataaatttcac--ctctttcacttaatttttttttttttaatttctttcatgtttagaagttcttctgattc 25598939  T
Q  781 tga--ttttttaatgaagcttagctac 805  Q
    |||  ||||||||||||| ||||||||    
T  25598938 tgattttttttaatgaagtttagctac 25598912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 453 - 789
Target Start/End: Complemental strand, 29387938 - 29387601
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttct-agactctagttctactttctagacaaaaat 551  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  |||||||| | |||||||| | ||||||||||||| |||| |  ||| ||||    
T  29387938 cccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaat 29387839  T
Q  552 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt-gc 650  Q
      ||| |||||||||||||   |||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||| || ||    
T  29387838 cggatcctatcaaaccacccctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgc 29387739  T
Q  651 ataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttat 749  Q
    |||||||||||||||| || ||| | ||||   | ||||||||  ||||||| || ||||||| ||||||| ||||||  ||||||||||||| ||||      
T  29387738 ataaaccattcgttttacccttttctacaatagaggagtgacaaatccaaacaacaccgttagataaatttcacctct--ttcacttaatttttttttta 29387641  T
Q  750 tttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     || ||||||||||| |||||||| ||| |||||||||||    
T  29387640 attctttcatgtttataagttcttctgattctgatttttt 29387601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 502 - 872
Target Start/End: Complemental strand, 43905977 - 43905616
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | || ||||| |||||| ||||||| || ||| |||| |||| || | ||||||||| ||| |||||||||||||||||| ||||| |||||    
T  43905977 tacacgtttgaggtttttttagactttagttctcctatctggacataaatctggtactatcaaactaccctcaatttgtataatcactcaatcagtcaat 43905878  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaa 700  Q
    || ||||| |||||||          ||||||||||||||||||||  |||||||||||| |||| || ||||||||| || || |||||||  ||||||    
T  43905877 ttgaaaagttatttca----------cacaacaatcatttctttttcacataaaccattcatttttccctttcccacagcggataagtgacaaatccaaa 43905788  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
     ||| ||||||| |||||| |||||||||||||||||||||| || ||||| |||||||||||||||| |||| ||| |||  ||||||| | |||||||    
T  43905787 tgacaccgttag-taaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttatgattctatttttttagtaaagctta 43905689  T
Q  801 gctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
     | ||         |||||||||||||||| | || |||||||||||| ||||| ||||||||||||||||||    
T  43905688 acaacacaaaaaaattgcgtttttattttattgggggtctattttaaatagagagtcgagcctcctatttcat 43905616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 485 - 789
Target Start/End: Original strand, 24252531 - 24252837
Alignment:
Q  485 tctttttctttcttcggtacacgtataagtttttt---ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgta 581  Q
    ||||||||||||||  |||||||| | ||||||||   ||||||||||||||| |||| |  ||| || |  ||| ||||||||||||| | ||||||||    
T  24252531 tctttttctttctttagtacacgtttgagtttttttttctagactctagttcttctttttgtacataa-tcagatcctatcaaaccacccttaatttgta 24252629  T
Q  582 taatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaa 680  Q
    |||||||||||||| |||||||  |||| ||||||| || ||||| |||||||||||||| ||| || |||||||||||||||||| || ||| ||||||    
T  24252630 taatcacttaatcagtcaatttggaaagttatttcagtgcaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaa 24252729  T
Q  681 cgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaat 779  Q
    |  ||||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  |||||||||||||| ||||| ||| |    
T  24252730 cagatgagtgacaaatccaaacgaccccgttagataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttagaacttcttctgatt 24252827  T
Q  780 ctgatttttt 789  Q
    || |||||||    
T  24252828 ctaatttttt 24252837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 514 - 789
Target Start/End: Complemental strand, 52655245 - 52654970
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    |||| |||||||||||||||| |||| |  | | ||||  ||| ||||||||||||||  |||||||||||||||||||||| |||||||  ||||||||    
T  52655245 ttttctctagactctagttctcctttttgtatataaatcggatcctatcaaaccaccactaatttgtataatcacttaatcagtcaatttggaaagctat 52655146  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||||| |||  | |||||||||||||||||| || ||| ||||||| || ||||||| | | |||||||  ||||||    
T  52655145 ttcattgaaagaatcacaacaatcatttttttcctcgcataaaccattcgttttacccttttccacaacataggagtgacaaattcaaacgataccgtta 52655046  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||||||| ||  |||||||||||| |||| ||||| ||  |||||||||||||||||||| ||| ||| |||||||    
T  52655045 gataaatttcac--ctctttcacttattttttttttaattcctttcatgtttagaagttcttctgattctaatttttt 52654970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 488 - 773
Target Start/End: Original strand, 54430468 - 54430754
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    |||||||| |||||||||||| | |||||||||||| |||||||||| |||| |  ||| |||| ||||| ||||||||||||   ||||||||||||||    
T  54430468 ttttcttttttcggtacacgtttgagttttttctaggctctagttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatca 54430567  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    |||||||| ||||||| ||||| ||||||||| ||||||   |||||||||||| ||| || |||||||||||||||||| || ||| |||||||  | |    
T  54430568 cttaatcagtcaatttgaaaagttatttcattaaaagaattgcaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacaaacg 54430667  T
Q  687 agtgac-attccaaac-gacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    |||||| | ||||||| ||  ||||||| ||||||| ||  || |||||||||||||| ||||| ||  ||||||||||||||||||||    
T  54430668 agtgacaaatccaaacggataccgttagataaatttcac--ctttttcacttaatttttttttaattcctttcatgtttagaagttctt 54430754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 488 - 773
Target Start/End: Original strand, 18408107 - 18408391
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    |||||||||||  |||||||| | ||||||||||||||| |||||||  ||| |  ||| ||||  ||| |||||||||||||   ||||||||||||||    
T  18408107 ttttctttctttagtacacgtttgagttttttctagactttagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtataatca 18408206  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    |||||||| ||||||| |||||||| | ||||||||||| |||||||||||||| |||||| |||||||| ||||||||| || ||| |||||||  |      
T  18408207 cttaatcagtcaatttgaaaagctaatccattgaaagaatcacaacaatcattttttttttcgcataaacaattcgttttacccttttccacaacagagc 18408306  T
Q  687 agtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    |||||| | |||||||||| ||||| | ||||||| ||  ||||||||||||||||| ||||| ||  ||||||||||||||||||||    
T  18408307 agtgacaaatccaaacgacaccgtttgataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttctt 18408391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 453 - 773
Target Start/End: Complemental strand, 41707239 - 41706916
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaat 551  Q
    ||||||||||||| |||||  || |||||   ||||||||||||||  |||||||| | |||||||| ||||||||||||||| |||| |  ||| ||||    
T  41707239 cccccacttaaataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaat 41707140  T
Q  552 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt--- 648  Q
      ||| |||||||||||||   |||||| ||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||||||       
T  41707139 cggatcctatcaaaccacccctaatttgcataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttttctt 41707040  T
Q  649 -gcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattt 746  Q
     |||||||||||||| ||| || |||  |||| |  | ||||||| | ||||||||||  |||||| ||||||| ||  | ||||||||||||||| |||    
T  41707039 cgcataaaccattcgctttaccctttttcacaccagaggagtgacaaatccaaacgacaacgttagataaatttcac--ccctttcacttaatttt-ttt 41706943  T
Q  747 tattttgtttcatgtttagaagttctt 773  Q
    || ||  ||||||||||||||||||||    
T  41706942 taattcttttcatgtttagaagttctt 41706916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 483 - 797
Target Start/End: Complemental strand, 19966035 - 19965716
Alignment:
Q  483 cttctttttctttcttcggtacacgtataagtt--ttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgt 580  Q
    ||||||||||||| ||| ||| |||| | ||||  |||| || |||||| |||| |||| | |||| |||| |||||||||||||||||   ||||||||    
T  19966035 cttctttttctttattccgtatacgtttgagttggttttttaaactctaattctcctttttggacataaatctgatgctatcaaaccactgccaatttgt 19965936  T
Q  581 ataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccac-aacaatcatttcttttttgcataaaccattcgttttcccttttcccaca 679  Q
    ||||||||||||| | | || || ||||||||||||||| |||||| ||| ||||||||||| |||   ||||||||||||||||||| | |||||||||    
T  19965935 ataatcacttaattagttaaattgaaaagctatttcattaaaagaatcacaaacaatcattt-tttcccgcataaaccattcgttttctcctttcccaca 19965837  T
Q  680 acgtatgagtga-cattccaaacgacgccg--ttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtg 776  Q
    ||| |||| |||  | | |||| || ||||  |||||||||||| ||||||||||||||| ||||| ||||||||  |||||||||||||||||||| ||    
T  19965836 acggatgaatgagaaattcaaatgatgccgctttaggtaaatttcacctctctttcactt-atttttttttatttcctttcatgtttagaagttcttctg 19965738  T
Q  777 aatctgat-tttttaatgaagc 797  Q
    | | |||| |||||||||||||    
T  19965737 attttgatatttttaatgaagc 19965716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 489 - 872
Target Start/End: Complemental strand, 1649978 - 1649604
Alignment:
Q  489 tttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcac 588  Q
    |||||||| ||||||||| | |||||||| |||| | |||||||||  |||||||||| |||| || |||||||||| ||||  ||||||||||||||||    
T  1649978 tttctttcatcggtacacatttaagttttgtctaaaatctagttctcttttctagacataaatctggtgctatcaaatcacccccaatttgtataatcac 1649879  T
Q  589 ttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgag 688  Q
    ||||||| ||||||| |||| |||||||| ||||||   | ||||||||| ||||||||||||||| ||||| |||||||| ||||| | |||| | |||    
T  1649878 ttaatcattcaatttgaaaatctatttcactgaaagcttcgcaacaatcaattcttttttgcataagccatttgttttccc-tttcctataacggaggag 1649780  T
Q  689 tgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttat-tttattttgtttcatgtttagaagttcttgtgaatctgattt 786  Q
    |||| | |||||||||  | |||| |||||           ||||||||| |||| | ||||||| ||||||||||||||||||||| | | || |||||    
T  1649779 tgacaaatccaaacgaaactgttaagtaaa-----------tttcacttatttttttctttatttcgtttcatgtttagaagttcttataactccgattt 1649691  T
Q  787 tttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactggtg-tctattttaaaaagagattcgagcctcctatttcat 872  Q
    ||||||||||||| | |||         ||| |||||||||||||||| |  |||||||||| |||||  ||||||||| |||||||    
T  1649690 tttaatgaagcttcggtacacaaacaaattgtgtttttattttactggggaactattttaaatagagagccgagcctcccatttcat 1649604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 488 - 773
Target Start/End: Complemental strand, 46791846 - 46791561
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||  |||||||| | |||||||| ||||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   |||||||||||||    
T  46791846 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataatc 46791747  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    ||||||||| |||||||  ||| ||||||||||| ||||| |||||||||||||| ||| || |||||||||||||  ||  || ||| |||||||  |     
T  46791746 acttaatcagtcaatttggaaaactatttcattgcaagaatcacaacaatcatttttttcttcgcataaaccattcacttgacccttttccacaacagag 46791647  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    ||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  ||||||||||||||||||||    
T  46791646 gagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttctt 46791561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 453 - 789
Target Start/End: Original strand, 8364052 - 8364389
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttt-ttctagactctagttctactttctagacaaaaat 551  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  |||||||| | |||||| ||||||||||| ||||| |||| |  ||| ||||    
T  8364052 cccccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactcttgttctcctttttgtacataaat 8364151  T
Q  552 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt--tttg 649  Q
      ||| |||||||||||||   |||||||||||||||||||||| |||||||  |||| |||||||||||||||| |||||||||||||| |||  || |    
T  8364152 cggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcattttttttcttcg 8364251  T
Q  650 cataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttatttta 748  Q
    || |||||||| ||||| || ||| |||||||  | ||| ||| | |||||||||| ||||||| ||||||| ||  |||||||||||||| || |||||    
T  8364252 cacaaaccatttgttttacccttttccacaacagaggagagacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatgtt-tttta 8364348  T
Q  749 ttttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     ||  |||||||||||||| ||||| ||| ||| |||||||    
T  8364349 attcctttcatgtttagaacttcttctgattctaatttttt 8364389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 488 - 773
Target Start/End: Original strand, 13401375 - 13401660
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    |||||||| |||||| |||||  |  ||||||||| ||||||||||| |||| |  ||| | ||| ||| ||||||||||||  | ||||||||||||||    
T  13401375 ttttcttttttcggtccacgttgagtttttttctaaactctagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatca 13401474  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttt--tgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    |||||||| ||||||| |||||||||||||||| ||||| |||||||||||||| |||||   |||||||||||| ||||| || ||| |||||||  |     
T  13401475 cttaatcagtcaatttgaaaagctatttcattggaagaatcacaacaatcatttttttttcccgcataaaccatttgttttacccttttccacaacagag 13401574  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    ||||| | | | |||||||| |||| || ||||||| ||  |||||||| |||||||| ||||| ||  ||||||||||||||||||||    
T  13401575 gagtgccaaattcaaacgacaccgtaagataaatttcac--ctctttcaattaatttt-ttttaattcctttcatgtttagaagttctt 13401660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 528 - 805
Target Start/End: Complemental strand, 1255158 - 1254892
Alignment:
Q  528 tagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaac 627  Q
    ||||||| |||| | |||| |||| |||||||||||||| ||| | |||||||||||| ||||||||  |||||||| |||| ||||||||||||||||     
T  1255158 tagttcttctttttggacataaatctgatgctatcaaacgacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaagaa- 1255060  T
Q  628 cacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctct 727  Q
      ||||||| |||| ||||| ||||||||||||||||||||| |||||| ||||    |||||  | || | || || |||||||||| |||| ||||||    
T  1255059 -tcaacaataatttgtttttcgcataaaccattcgttttcccctttcccgcaac---agagtgcaaatctagacaacaccgttaggtagatttcacctct 1254964  T
Q  728 ctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
     |||| ||||||||  |||||||| ||||||||||||||| ||      | ||||||||||||||||| |||||||||    
T  1254963 ttttcgcttaatttctttttatttcgtttcatgtttagaaatt------attctgattttttaatgaaacttagctac 1254892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 454 - 773
Target Start/End: Complemental strand, 27729952 - 27729633
Alignment:
Q  454 ccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttc-tagactctagttctactttctagacaaaaatt 552  Q
    |||||||||||| |||||  || |||||   || ||||||||| |  |||||||| | ||||||||  |||||||||||||| |||| |  ||| ||||     
T  27729952 ccccacttaaataaaaaatatatatgttatatcattttctttcattagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatc 27729853  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatt-tcttttttgca 651  Q
     |||  ||||||||||||   ||||||||||||||| ||||||||||||||  ||||| |||| || ||||||| ||||||||||||| | || || |||    
T  27729852 ggatcttatcaaaccacccctaatttgtataatcacataatcaatcaatttggaaagcaatttgatcgaaagaatcacaacaatcattattttcttcgca 27729753  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    ||||||||||||||| || |||  |||||| ||  |||||| | |||||||||| | ||||| ||||||| ||  ||||||||||||||||| ||||| |    
T  27729752 taaaccattcgttttaccctttttcacaacatagaagtgacaaatccaaacgacactgttagataaatttcac--ctctttcacttaatttt-ttttaat 27729656  T
Q  751 ttgtttcatgtttagaagttctt 773  Q
    |  ||||||||||||||||||||    
T  27729655 tcctttcatgtttagaagttctt 27729633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 446 - 789
Target Start/End: Complemental strand, 23067917 - 23067573
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt--ctagactctagttctactttctag 543  Q
    ||||||||||||| |||||| ||| |  || |||||   || |||||||||||  |||||||| | ||||||||  ||||||| ||||||| |||| |      
T  23067917 atacccacccccatttaaataaaatatatatatgttatatcattttctttctttagtacacgtttgagttttttttctagactttagttctcctttttgt 23067818  T
Q  544 acaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccaca-acaatcatttc 642  Q
    ||| ||||  ||| |||||||||||||   ||||||||||||||||| | || ||||||| ||||| ||||||||| |||||| |||| ||||||||||     
T  23067817 acataaatcggatcctatcaaaccacccctaatttgtataatcacttcaccagtcaatttgaaaagttatttcatttaaagaatcacacacaatcatttt 23067718  T
Q  643 tt-ttttgcataaaccattcgttttcccttttcccacaacgtatgagtg-acattccaaacgacgccgttaggtaaattttacctctctttcacttaatt 740  Q
    ||  || |||||||||||| ||||| || ||| |||||||  | ||||| | | |||||| ||| ||||||| ||||||| ||  ||||||||||||||     
T  23067717 ttaattcgcataaaccatttgttttacccttttccacaacagaggagtgaaaaatccaaatgacaccgttagataaatttcac--ctctttcacttaatc 23067620  T
Q  741 ttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    || ||||| ||  |||||||||||||| ||||| ||| | |||||||||    
T  23067619 tt-tttta-ttcctttcatgtttagaacttcttctgattttgatttttt 23067573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 590 - 789
Target Start/End: Original strand, 6715457 - 6715655
Alignment:
Q  590 taatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgtttt-cccttttcccacaacgtatgag 688  Q
    |||||| |||||||  |||| |||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| ||||||| |||||||  | |||    
T  6715457 taatcagtcaattttgaaagttatttcattgaaagaatcataacaatcatttttttttcgcataaaccattcgttttaccctttttccacaacagaggag 6715556  T
Q  689 tgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttt 787  Q
    |||| | |||||||||| || |||  ||||||| ||  ||||||||||||||||| ||||| ||  || ||||||||||  ||||| ||  |||||||||    
T  6715557 tgacaaatccaaacgacaccattatataaatttcac--ctctttcacttaatttt-ttttaattccttccatgtttagatcttcttctgcttctgatttt 6715653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 579 - 693
Target Start/End: Original strand, 15987207 - 15987321
Alignment:
Q  579 gtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccac 678  Q
    ||||||||||||||||| |||||||  |||| ||||||||| ||||||  ||||| ||||||| ||||| |||||||||||||||||| || ||||||||    
T  15987207 gtataatcacttaatcattcaatttcgaaagttatttcattaaaagaattacaactatcatttatttttcgcataaaccattcgtttttccctttcccac 15987306  T
Q  679 aacgtatgagtgaca 693  Q
    |||| | ||||||||    
T  15987307 aacggaggagtgaca 15987321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 575 - 789
Target Start/End: Original strand, 20762052 - 20762266
Alignment:
Q  575 atttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttccctttt 673  Q
    |||||||||||||||| |||| | |||||  ||  ||||||||||||||||| || ||||||||||| |||  | |||||||||||||||||| || |||    
T  20762052 atttgtataatcacttgatcagttaatttggaagtctatttcattgaaagaatcataacaatcatttttttcgtcgcataaaccattcgttttacccttt 20762151  T
Q  674 cccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttct 772  Q
     ||||||   | ||||||| | | |||||||  |||||   ||||||| ||  ||||||||||||||||| ||||| ||  |||||| ||||||||||||    
T  20762152 tccacaatagaggagtgacaaatacaaacgataccgttgaataaatttcac--ctctttcacttaatttttttttaattcatttcatatttagaagttct 20762249  T
Q  773 tgtgaatctgatttttt 789  Q
    |  || |||||||||||    
T  20762250 tccgattctgatttttt 20762266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 523 - 651
Target Start/End: Complemental strand, 4207465 - 4207343
Alignment:
Q  523 gactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaa 622  Q
    |||||||||||| |||| | ||||| ||||  |||||||||||||| |  ||||||||||||||||||||||| |||||||  |||| ||||||    ||    
T  4207465 gactctagttctcctttttggacaagaattcaatgctatcaaaccatc--caatttgtataatcacttaatcattcaatttggaaagatatttc----aa 4207372  T
Q  623 agaaccacaacaatcatttcttttttgca 651  Q
    |||| |||||||||| |||||||||||||    
T  4207371 agaatcacaacaatcctttcttttttgca 4207343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 521 - 654
Target Start/End: Original strand, 21660445 - 21660572
Alignment:
Q  521 tagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattg 620  Q
    |||||| || |||| |||| | ||||| ||||| |||||||||||||| ||  ||| |||||||||||||||||||||||||||||||  ||||||        
T  21660445 tagactatatttctcctttttggacaagaatttaatgctatcaaaccatca--aatctgtataatcacttaatcaatcaatttaaaaaattatttc---- 21660538  T
Q  621 aaagaaccacaacaatcatttcttttttgcataa 654  Q
    |||||| ||||| |||| ||||||||| ||||||    
T  21660539 aaagaatcacaataatcctttctttttcgcataa 21660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 629 - 786
Target Start/End: Complemental strand, 27110879 - 27110723
Alignment:
Q  629 acaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacgacgccgttaggtaaattttacctc 726  Q
    ||||||||||||| ||  || |||||||||||||||||| || ||| |||||||  | ||||||||  | |||||||| ||||||| ||||||| |||||    
T  27110879 acaacaatcattttttccttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccgttagataaatttcacctc 27110780  T
Q  727 tctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattt 786  Q
    |  ||||||||||||| ||||| ||  |||||||||||||| ||||| ||| ||||||||    
T  27110779 t--ttcacttaatttt-ttttaattcctttcatgtttagaacttcttatgattctgattt 27110723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 706 - 773
Target Start/End: Original strand, 15998418 - 15998483
Alignment:
Q  706 ccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    ||||||||||||||| || |||||||||||||||||  || | ||| |||||||||||||||||||||    
T  15998418 ccgttaggtaaatttcacatctctttcacttaattt--ttctgtttcgtttcatgtttagaagttctt 15998483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 27110999 - 27110909
Alignment:
Q  446 atacccaccccc-acttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttct 534  Q
    |||||||||||| |||||||| |||||  || |||||   ||||||||||||||  |||||||| | |||||||| |||||||||||||||    
T  27110999 atacccaccccctacttaaataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttct 27110909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 869
Target Start/End: Complemental strand, 27110669 - 27110636
Alignment:
Q  836 gtctattttaaaaagagattcgagcctcctattt 869  Q
    |||||||||||||||||| |||||||||||||||    
T  27110669 gtctattttaaaaagagagtcgagcctcctattt 27110636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 213; Significance: 1e-116; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 446 - 805
Target Start/End: Complemental strand, 35654168 - 35653811
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||||||  ||||||||||||||||||||||||||  ||| |||||  | ||||  ||||||||| |||||||||||||||||||||||||||||| |||    
T  35654168 atacccatacccacttaaattaaaaaattacatgtaactttttttt--tccttcactacacgtatgagttttttctagactctagttctactttctggac 35654071  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  35654070 ataaatatgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaattatttcttt 35653971  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatt 745  Q
    || |||||||| ||||||||| || ||||| || ||||| |||||||||| |||| ||| ||||||| ||||||| ||||||||||||||||||||||||    
T  35653970 ttcgcataaactattcgtttttccctttcctacgacgtaggagtgacatttcaaatgacaccgttagataaatttcacctctctttcacttaattttatt 35653871  T
Q  746 ttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    || |||||||||||||||| |||||||| ||| || || |||||||||||||||| ||||    
T  35653870 ttgttttgtttcatgtttaaaagttcttctgattcggactttttaatgaagcttaactac 35653811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 446 - 872
Target Start/End: Complemental strand, 21791744 - 21791313
Alignment:
Q  446 atacccacccccacttaaattaaaaaat-------tacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactt 538  Q
    ||||||||||||||||||||||||||||       || ||||| |||||||||||||| || ||||| || | ||||||||||||||||||||||| |||    
T  21791744 atacccacccccacttaaattaaaaaatatatatatatatgttacttctttttctttcatcagtacatgtttgagttttttctagactctagttctcctt 21791645  T
Q  539 tctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatca 638  Q
    |||  ||| ||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||    
T  21791644 tctgaacataaatttgatgccatcaaaccaccttcaatgtgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatca 21791545  T
Q  639 tttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaa 738  Q
    ||||||||| |||||||||||| | |||||| |||||||| ||| |||||||||| ||||||||||   ||||||||||||| |||||||||| | || |    
T  21791544 tttctttttcgcataaaccatttg-tttcccctttcccacgacgaatgagtgacaatccaaacgacattgttaggtaaatttcacctctctttaaattta 21791446  T
Q  739 ttttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactggtgtc 838  Q
    |||||||||||||  |||||||||||||||||||| ||| ||| | |||||||| ||| |||||| |         |||| ||| ||||||||||| | |    
T  21791445 ttttattttatttcatttcatgtttagaagttcttctgattct-aatttttaataaagtttagctgcacagaaaaattgcatttctattttactggagcc 21791347  T
Q  839 tattttaaaaagagattcgagcctcctatttcat 872  Q
    ||||||||||||||| ||||||||| ||||||||    
T  21791346 tattttaaaaagagagtcgagcctcatatttcat 21791313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 446 - 772
Target Start/End: Original strand, 22423562 - 22423886
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    ||||||||||||||||| |||||||||||| ||||| ||| |||||||||    ||||||||||| |||||||||||||||||||||||||||||| |||    
T  22423562 atacccacccccacttatattaaaaaattatatgttacttttttttcttt----ggtacacgtatgagttttttctagactctagttctactttctggac 22423657  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt 645  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||| || |||||| |||| |||    
T  22423658 ataaatttgatgctatcaaaccaccatcaatttgtatgatcacttaatcaatcaatttgaaaaactattttattgaaagaatcaaaacaattatttattt 22423757  T
Q  646 ttt--gcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaatttta 743  Q
    |||   |||||| |||||||||| || ||||  || || || ||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||    
T  22423758 tttccacataaatcattcgtttttccatttcatacgacataggagtgacattccaaacgacaccgttagataaatttcacctctgtttcacttaatttta 22423857  T
Q  744 ttttattttgtttcatgtttagaagttct 772  Q
    |||| |||||||||||||||| |||||||    
T  22423858 ttttgttttgtttcatgtttaaaagttct 22423886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 487 - 869
Target Start/End: Original strand, 5545244 - 5545625
Alignment:
Q  487 tttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    ||||| ||| |||||  ||||| | |||||||||||||||||| |||| || ||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  5545244 ttttttttttttcggagcacgtttgagttttttctagactctaattcttctgtctggacataaatttgatgccatcaaaccaccaccaatttgtataatc 5545343  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    ||||||||  |||||||  |||||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||  ||| ||||||| | |    
T  5545344 acttaatcggtcaatttggaaagctatttcattaaaagaatcacaacaatcatttatttttcgcataaaccattcgttttcccccttctcacaacggagg 5545443  T
Q  687 agtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaa-ttttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
    |||||| | | |||||||| ||||||||||||||| ||   |||||||||||| |||| |||||||| ||||||||||||||||||||| ||| |||  |    
T  5545444 agtgacaaattcaaacgacaccgttaggtaaatttcac--gtctttcacttaattttttttttatttcgtttcatgtttagaagttcttctgattctatt 5545541  T
Q  785 tttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactggtgtctattttaaaaagagattcgagcctcctattt 869  Q
    |||||| |||| |||||||||         || |||||||| ||| |||| | |||||||||||||||| |||||||||||||||    
T  5545542 tttttactgaatcttagctac-aaaaaaaattacgtttttacttttctggagcctattttaaaaagagagtcgagcctcctattt 5545625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 512 - 773
Target Start/End: Complemental strand, 10575644 - 10575386
Alignment:
Q  512 agttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagct 611  Q
    ||||||||||| |||||||||||  ||| || ||| |||||| |||||||||||||||| |||| ||||||||||||||||||| |||||||| |||| |    
T  10575644 agttttttctaaactctagttct--ttttta-acataaattttatgctatcaaaccaccctcaacttgtataatcacttaatcagtcaatttagaaagtt 10575548  T
Q  612 atttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgtta 711  Q
    |||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| | |||||||| ||| || ||| |||| |    
T  10575547 atttcattgaaataatcacaacaatcatttctttttcgcataaaccattcgttttcccctttcccacgacggaggagtgacaatccgaatgacaccgtca 10575448  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    ||||||||| | |||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  10575447 ggtaaatttcatctctttttcactttattttattttatttcgtttcatgtttagaagttctt 10575386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 454 - 669
Target Start/End: Complemental strand, 43154972 - 43154755
Alignment:
Q  454 ccccacttaaattaaaaaattacatgttgcttcttttt--ctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaat 551  Q
    |||||||| ||||||||||||||||||| ||| |||||  |||||||  | |||||||| ||||||||||||| |||||||||||||| | |||| ||||    
T  43154972 ccccactttaattaaaaaattacatgttacttttttttttctttctttaggacacgtatgagttttttctagattctagttctactttttggacataaat 43154873  T
Q  552 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgca 651  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||||||||| |||| ||||| |||    
T  43154872 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattaaaagaatcacaacaattatttatttttcgca 43154773  T
Q  652 taaaccattcgttttccc 669  Q
    |||| |||||||||||||    
T  43154772 taaatcattcgttttccc 43154755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 502 - 872
Target Start/End: Original strand, 55134138 - 55134510
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | |||||||| |||||| |||||||  | ||| |||| ||||||| | |||||||||||| | ||||| ||||||| ||||||||| |||||    
T  55134138 tacacgtttgagttttttgtagactttagttctcttatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaat 55134237  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttc-ttttttgcataaaccattcgttttcccttttcccacaacgtatgagtga-cattccaa 699  Q
    || |||||||||||||| ||||||| ||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||| || ||| |  | |||||    
T  55134238 ttgaaaagctatttcatagaaagaatcacaacaatcatttctttttttacataaatcattcgttttcccttttcccgcaacggataagtaataaatccaa 55134337  T
Q  700 acgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctt 799  Q
    | ||| | |||| ||||||| |||||||||||||||||||||| || ||||| |||||||||||||||| |||| |||  ||||||||||||| ||||||    
T  55134338 atgacactgtta-gtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttttgatcctgattttttaataaagctt 55134436  T
Q  800 agctacnnnnnnnnnttgcgtttttattttactggtg-tctattttaaaaagagattcgagcctcctatttcat 872  Q
    ||||||         ||| |||||||||||| ||| |  |||||||||| |||||  |||||||| ||||||||    
T  55134437 agctacacaaaaaaattgtgtttttattttattggggacctattttaaatagagagccgagcctcatatttcat 55134510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 453 - 789
Target Start/End: Original strand, 19661260 - 19661595
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatt 552  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  |||||||| | |||||||||||||||||||||||  ||| |  ||| ||||     
T  19661260 cccccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttctagactctagttctcatttttgtacataaatc 19661359  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgca 651  Q
     ||| |||||||||||||   |||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||| ||| ||| ||||||    
T  19661360 ggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaaacacaacaatcctttttttctttgca 19661459  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    ||||||||||||||| || ||| |||||||  | ||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| |    
T  19661460 taaaccattcgttttacccttttccacaacaaaggagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttt-ttttaat 19661556  T
Q  751 ttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |  |||||||||||||||||||| ||| |||| ||||||    
T  19661557 tcctttcatgtttagaagttcttctgattctgttttttt 19661595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 502 - 768
Target Start/End: Complemental strand, 45172778 - 45172514
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||||| |  ||| |||| |||| || | ||||||||||||| | |||||||||||||||||||||| |||||    
T  45172778 tacacgtttgagttttttctagactttagttctccaatctggacataaatctggtactatcaaaccaccct-aatttgtataatcacttaatcagtcaat 45172680  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||| ||||||| ||||||||||||||||||||   ||| ||||||||||||||| |||||||||||| || |||||| | ||||||    
T  45172679 ttgaaaagctatttcatggaaagaatcacaacaatcatttctttttcatatagaccattcgttttcccctttcccacaacggataagtgacaaatccaaa 45172580  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaag 768  Q
     ||| |||||| ||||||| |||||||||||||||| ||||| || ||||| ||||||||||||||||    
T  45172579 tgacaccgtta-gtaaattctacctctctttcactt-atttttttgtatttcgtttcatgtttagaag 45172514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 456 - 646
Target Start/End: Original strand, 24449007 - 24449200
Alignment:
Q  456 ccacttaaattaaaaaattacatgttgc-ttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttg 554  Q
    |||||||||||||||||||||||||| | || ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || | |||||||    
T  24449007 ccacttaaattaaaaaattacatgttacattttttttctttcttcagtacacgtatgagttttttctagactctagttctactttctggatataaatttg 24449106  T
Q  555 atgctatcaaaccac--catcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttt 646  Q
    |||||||||||||||   ||||||||||||||||||||||||  ||||||| |||| ||||||| | ||||||||||||||||| |||||||||    
T  24449107 atgctatcaaaccactatatcaatttgtataatcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaattatttctttt 24449200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 514 - 789
Target Start/End: Complemental strand, 23426288 - 23426014
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   |||||||||||||||||||||| |||||||  ||||||||    
T  23426288 ttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataatcacttaatcagtcaatttggaaagctat 23426189  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||| |||||||  | ||||||| | ||||||| |||||||||    
T  23426188 ttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacaacgccgtta 23426089  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||||||| ||  ||||||||||||||||| ||||| ||  |||||||||||||||||||| ||| ||| |||||||    
T  23426088 gataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttcttctgattctaatttttt 23426014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 453 - 789
Target Start/End: Complemental strand, 32130973 - 32130638
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatt 552  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  |||| ||| | |||||||||||||| |||||||| |||| |  ||| ||||     
T  32130973 cccccacttaaataaaaaatatatatgttatatcattttctttctttagtacccgtttgagttttttctagacactagttcttctttttgtacataaatc 32130874  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgca 651  Q
     ||| |||||||||||||   |||||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||||| ||| || |||    
T  32130873 ggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcatttttttcttcgca 32130774  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    ||||||||||||||| || ||| |||||||  | ||||||| | | |||||||| |  |||| |||||||  | |||||||||||||||||| ||||| |    
T  32130773 taaaccattcgttttacccttttccacaacagaggagtgacaaattcaaacgacacaattagataaattt--catctctttcacttaatttt-ttttaat 32130677  T
Q  751 ttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |  |||||||||||||||||||| ||| |||||||||||    
T  32130676 tcctttcatgtttagaagttcttctgattctgatttttt 32130638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 488 - 789
Target Start/End: Original strand, 53011628 - 53011931
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatca 587  Q
    |||||||||||  |||||||| | ||||||||||| |||||| |||| |||| |  ||| ||||  ||| |||||||||||||   ||||||||||||||    
T  53011628 ttttctttctttagtacacgtttgagttttttctaaactctaattctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtataatca 53011727  T
Q  588 cttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    |||||||| |||||||  |||||||||||||| |||||| |||||||||||||| ||| || ||||||||||||| |||| || ||| |||||||  | |    
T  53011728 cttaatcagtcaatttggaaagctatttcattaaaagaatcacaacaatcatttttttcttcgcataaaccattcattttacccttttccacaacagagg 53011827  T
Q  687 agtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaa--ttttattttattttgtttcatgtttagaagttcttgtgaatctga 783  Q
    |||||| | |||||||||| ||||||| ||||||| ||  |||||||||||||  |||| ||||| ||  |||||||||||||||||||| ||| |||||    
T  53011828 agtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttttttttttaattcctttcatgtttagaagttcttctgattctga 53011925  T
Q  784 tttttt 789  Q
    ||||||    
T  53011926 tttttt 53011931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 488 - 789
Target Start/End: Original strand, 27632313 - 27632614
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttt-ttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||| |||||||| | |||||| ||||||| ||||||||| |||| |  ||| ||||||||| |||||||||||||   |||||||||||||    
T  27632313 ttttctttcttcagtacacgtttgagtttttttctagattctagttctcctttttgtacataaatttgatcctatcaaaccacccctaatttgtataatc 27632412  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    ||||||| | ||||||| |||||||| ||||||||||||| |||| ||||||||| ||| || ||||||| |||||| ||| || ||| |||||||  |     
T  27632413 acttaattagtcaatttgaaaagctacttcattgaaagaatcacatcaatcatttttttcttcgcataaatcattcgctttacccttttccacaacagag 27632512  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
     |||||| | ||||||| || ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  |||||||||||||||||||| ||| ||||||    
T  27632513 tagtgacaaatccaaacaacaccgttagataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttcttctgattctgat 27632609  T
Q  785 ttttt 789  Q
    |||||    
T  27632610 ttttt 27632614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 453 - 789
Target Start/End: Complemental strand, 28463772 - 28463436
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaat 551  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  ||| |||| | |||||||| ||||||||||||||| |||| |  ||| ||||    
T  28463772 cccccacttaaataaaaaatatatatgttatatccttttctttctttagtaaacgtttgagtttttttctagactctagttctcctttttgtacataaat 28463673  T
Q  552 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgc 650  Q
      |||  ||||||||||||   ||||||||||||||||||||||||||| || ||||||||||||||||||| || |||||||||||||| ||| || ||    
T  28463672 cggatcttatcaaaccacccctaatttgtataatcacttaatcaatcaagttgaaaagctatttcattgaaaaaatcacaacaatcatttttttcttcgc 28463573  T
Q  651 ataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttat 749  Q
    |||||||||||||||| || ||| ||||||   | ||||||| | | |||||||| ||||||| ||||||| ||  ||||||||||||||||| |||||     
T  28463572 ataaaccattcgttttgcccttttccacaatagaggagtgacaaattcaaacgacaccgttagataaatttcac--ctctttcacttaatttt-ttttaa 28463476  T
Q  750 tttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    ||  ||| |||||||||| ||||| ||| |||||||||||    
T  28463475 ttcctttgatgtttagaacttcttctgattctgatttttt 28463436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 502 - 805
Target Start/End: Original strand, 34982154 - 34982457
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||| | || ||| |||| |||| || | ||| ||||||| |  ||||||||||||||||||||||| |||||    
T  34982154 tacacgtttgagttttttctagactttagtttttctatctggacataaatctggtactaacaaaccatccccaatttgtataatcacttaatcagtcaat 34982253  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac--attccaa 699  Q
    |  |||| ||||||| ||||||||| ||||||||| ||||||||||   ||||| |||| |||||||| |||||||||||  || | ||||  ||  |||    
T  34982254 tggaaaaactatttcgttgaaagaatcacaacaattatttctttttcatataaatcatttgttttcccctttcccacaacagataaatgacaaatctcaa 34982353  T
Q  700 acgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctt 799  Q
    ||||| |||||| ||||||| ||||||||||| |||||||||| || ||||| |||| |||||||||| ||||| ||| ||||| |||||||| ||||||    
T  34982354 acgaccccgtta-gtaaattctacctctcttttacttaatttttttgtatttcgttttatgtttagaatttcttctgattctga-tttttaataaagctt 34982451  T
Q  800 agctac 805  Q
    | ||||    
T  34982452 aactac 34982457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 488 - 871
Target Start/End: Complemental strand, 11681892 - 11681505
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctag-acaaaaatttgatgctatcaaaccaccatcaatttgtataat 585  Q
    |||||||||||  |||||||| | |||||||| ||||||||||||||| |||| |   ||| ||||  ||| |||||||||||||   ||||| ||||||    
T  11681892 ttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccacccctaatttttataat 11681793  T
Q  586 cacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgta 684  Q
    |||||||||| |||||||  |||| |||||||||||||||| |||||||||||||| ||| || | ||||||||| |||||| || ||| |||||||  |    
T  11681792 cacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttacccttttccacaacaga 11681693  T
Q  685 tgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga 783  Q
    |||||||| | ||||||| || ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  |||||||||||||| || || ||| |||||    
T  11681692 tgagtgacaaatccaaacaacaccgttagataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttagaactttttctgattctga 11681595  T
Q  784 --ttttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttca 871  Q
      ||||||||||||  ||||||||         ||  | |||||||||||| || | |||||||||||||||| |||||||||||||||||    
T  11681594 ttttttttaatgaaatttagctacacaaaaaagttatg-ttttattttactaggggcctattttaaaaagagagtcgagcctcctatttca 11681505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 488 - 871
Target Start/End: Complemental strand, 11690171 - 11689784
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctag-acaaaaatttgatgctatcaaaccaccatcaatttgtataat 585  Q
    |||||||||||  |||||||| | |||||||| ||||||||||||||| |||| |   ||| ||||  ||| |||||||||||||   ||||| ||||||    
T  11690171 ttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccacccctaatttttataat 11690072  T
Q  586 cacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgta 684  Q
    |||||||||| |||||||  |||| |||||||||||||||| |||||||||||||| ||| || | ||||||||| |||||| || ||| |||||||  |    
T  11690071 cacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttacccttttccacaacaga 11689972  T
Q  685 tgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga 783  Q
    |||||||| | ||||||| || ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  |||||||||||||| || || ||| |||||    
T  11689971 tgagtgacaaatccaaacaacaccgttagataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttagaactttttctgattctga 11689874  T
Q  784 --ttttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttca 871  Q
      ||||||||||||  ||||||||         ||  | |||||||||||| || | |||||||||||||||| |||||||||||||||||    
T  11689873 ttttttttaatgaaatttagctacacaaaaaagttatg-ttttattttactaggggcctattttaaaaagagagtcgagcctcctatttca 11689784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 454 - 805
Target Start/End: Complemental strand, 26329213 - 26328860
Alignment:
Q  454 ccccacttaaattaa-aaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatt 552  Q
    |||||||||||| || |||| || ||||| |||||||||||||||| ||||||||| | | ||||||||||||| || |||| |||  | |||| ||||     
T  26329213 ccccacttaaataaataaaaatatatgttacttctttttctttctttggtacacgtttgaattttttctagactgtaattctcctt--tggacataaatc 26329116  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttc-attgaaagaaccacaacaatcatttcttttttgca 651  Q
    |||||||| |||||||||  |||||| |||||||| | ||||| |||||||| ||||||  ||| ||  |||||| |||||| ||||||| ||||||| |    
T  26329115 tgatgctaccaaaccacctccaatttatataatcattcaatcagtcaatttagaaagctgcttcaataaaaagaatcacaacgatcatttattttttgga 26329016  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtga-cattccaaacgacgccgttaggtaaattttacctctctttcacttaatt-ttattttat 749  Q
    ||||||||| | |||||| |||||||||||| | || |||  | | |||||||| |  |||||||||||| |||||||||| |||||||| || ||||||    
T  26329015 taaaccatttg-tttcccctttcccacaacggaggaatgataaattcaaacgacacttttaggtaaatttcacctctcttttacttaattctttttttat 26328917  T
Q  750 tttgtttcatgtttagaagttcttgtgaatctga-ttttttaatgaagcttagctac 805  Q
    ||  |||||||||||||| ||||| | | ||||| ||||||||||||| ||||||||    
T  26328916 ttcttttcatgtttagaaattcttctaattctgatttttttaatgaagtttagctac 26328860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 574 - 789
Target Start/End: Original strand, 41038252 - 41038465
Alignment:
Q  574 aatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttt 672  Q
    |||||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||    
T  41038252 aatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccctt 41038351  T
Q  673 tcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttc 771  Q
    | |||||||  | ||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||  ||||| ||  ||||||||||||||||||    
T  41038352 ttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaattt--ttttaattcctttcatgtttagaagttc 41038447  T
Q  772 ttgtgaatctgatttttt 789  Q
    || ||| | |||||||||    
T  41038448 ttctgattttgatttttt 41038465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 512 - 789
Target Start/End: Original strand, 23256534 - 23256810
Alignment:
Q  512 agttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagct 611  Q
    |||||||| ||||||| |||||| |||| |  ||| ||||  ||| |||||||||||||   ||||||||||| |||||||||| |||||||| ||||||    
T  23256534 agttttttttagactccagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataaccacttaatcagtcaatttagaaagct 23256633  T
Q  612 atttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtt 710  Q
    |||||| |||||||| |||||||||||||| || ||  ||||||||||||||||| || ||| |||||||  | ||||||| | | |||||||| ||| |    
T  23256634 atttcaatgaaagaatcacaacaatcattttttcttcccataaaccattcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccggt 23256733  T
Q  711 aggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaag-ttcttgtgaatctgatttttt 789  Q
    || ||||||| ||  || ||| |||||||||| ||||| ||  |||||||||| |||| ||||| ||| |||||||||||    
T  23256734 agataaatttcac--ctattttacttaatttt-ttttaattcctttcatgtttggaagtttcttctgattctgatttttt 23256810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 669 - 801
Target Start/End: Original strand, 24449196 - 24449328
Alignment:
Q  669 cttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaag 768  Q
    ||||||| || ||||| |||||||||| |||| |||  ||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||| |||    
T  24449196 cttttcctacgacgtaggagtgacatttcaaatgacatcgttaggtaaactccacctctcgttcacttaattttattttattttgtttcatgtttaaaag 24449295  T
Q  769 ttcttgtgaatctgattttttaatgaagcttag 801  Q
    ||||| ||| |||||||||||||||||||||||    
T  24449296 ttcttctgattctgattttttaatgaagcttag 24449328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 515 - 789
Target Start/End: Original strand, 29579823 - 29580095
Alignment:
Q  515 tttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatt 614  Q
    ||||||||||||||||||||| ||| |  ||| |||| |||| |||||||||||||   |||||||||||| | ||||||| |||| || ||||||||||    
T  29579823 tttttctagactctagttctattttttgtacataaatctgatcctatcaaaccacccataatttgtataattaattaatcagtcaaattgaaaagctatt 29579922  T
Q  615 tcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttag 712  Q
    ||| |||||||| |||||||||||||| ||| || |||||||| ||||||||| || ||| |||||||  |  |||||| | |||||| ||  |||||||    
T  29579923 tcaatgaaagaatcacaacaatcatttttttcttcgcataaacaattcgttttaccattttccacaacagagtagtgacaaatccaaatgataccgttag 29580022  T
Q  713 gtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     ||||||| ||  ||||||||||||||||| ||||| ||  ||| || ||||||||||||| ||| | |||||||||    
T  29580023 ataaatttcac--ctctttcacttaatttt-ttttaattccttt-atatttagaagttcttttgattttgatttttt 29580095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 558 - 789
Target Start/End: Original strand, 44478025 - 44478256
Alignment:
Q  558 ctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt--tttgcataaa 655  Q
    |||||||||||||   |||||||||||||||| ||||| |||||||  ||||||||||||||||||||| |||||||||||||| |||  || |||||||    
T  44478025 ctatcaaaccacccataatttgtataatcactaaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaa 44478124  T
Q  656 ccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgt 754  Q
    | ||||||||| || ||| |||||||  | ||||||| | | |||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  |    
T  44478125 ctattcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccgttagataaatttcac--ctctttcacttaatttt-ttttaattcct 44478221  T
Q  755 ttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     | |||||||||| ||||| ||| || ||||||||    
T  44478222 cttatgtttagaacttcttctgactcggatttttt 44478256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 514 - 789
Target Start/End: Complemental strand, 29221743 - 29221469
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    |||||||||||||||| ||||  ||| |  ||| |||| |||| ||||||||||||  | ||||||||||||||||||| |  |||||||  ||  ||||    
T  29221743 ttttttctagactctaattctcgtttttgtacataaatctgatcctatcaaaccactcttaatttgtataatcacttaaacggtcaatttggaagtctat 29221644  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||| ||| |||||||||||||| ||| || |||||||||||||||||| || ||| |||||||  | ||||||| | |  ||||||| |||||     
T  29221643 ttcattgaaggaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatttaaacgacaccgttg 29221544  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | | ||||| ||  ||||||||||||||||| ||||| ||  |||||| ||||||||||||| ||| |||||||||||    
T  29221543 gattaatttcac--ctctttcacttaatttt-ttttaattcctttcatatttagaagttcttctgattctgatttttt 29221469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 488 - 748
Target Start/End: Original strand, 16072509 - 16072774
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    ||||||||||||||||||||| | |||||||| |||  |||||| ||| |||| |  ||| ||||||||| ||||||||||| |   |||||||||||||    
T  16072509 ttttctttcttcggtacacgtttgagtttttttctaagctctagatctcctttttgtacataaatttgatcctatcaaaccatccctaatttgtataatc 16072608  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaac----cacaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaac 681  Q
    | ||||||| ||||||| |||| |||||||| ||||||||     |||||||||||||| ||| || |||||||| ||| ||||| || ||| |||||||    
T  16072609 atttaatcagtcaatttgaaaaactatttcaatgaaagaaagaatcacaacaatcatttttttcttcgcataaactatttgttttacccttttccacaac 16072708  T
Q  682 gtatgagtgacattcc-aaacgacgccgttaggtaaattttacctctctttcacttaattttatttta 748  Q
      | ||||||||  || ||| |||  |||||| ||||||| ||||||  ||||||||||||| |||||    
T  16072709 agaggagtgacaaacccaaatgacatcgttagataaatttcacctct--ttcacttaattttttttta 16072774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 611 - 747
Target Start/End: Complemental strand, 51066449 - 51066314
Alignment:
Q  611 tatttcattgaaagaaccacaacaatcatttctttttt--gcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgcc 707  Q
    |||||||||||||||| |||||||||||||| ||||||  |||||||||||| ||||||||  |||||| |||| | ||||||| | |||||| ||| |     
T  51066449 tatttcattgaaagaatcacaacaatcattttttttttccgcataaaccatttgttttccc--ttcccaaaacgaaggagtgacaaatccaaatgacact 51066352  T
Q  708 gttaggtaaattttacctctctttcacttaattttatttt 747  Q
    ||||||||||||| ||  |||||||||||| ||| |||||    
T  51066351 gttaggtaaatttcac--ctctttcacttattttaatttt 51066314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 675 - 805
Target Start/End: Complemental strand, 16887943 - 16887813
Alignment:
Q  675 ccacaacgtatgagtgacat-tccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    |||||||  ||||||||||  |||||||||| ||||||| ||||||| ||||||  ||||||||||||| ||||| ||  |||||| |||||||||| ||    
T  16887943 ccacaacagatgagtgacaaatccaaacgacaccgttagataaatttcacctct--ttcacttaatttt-ttttaattcctttcatatttagaagttatt 16887847  T
Q  774 gtgaatctgatttttt--aatgaagcttagctac 805  Q
     ||| | |||||||||  ||||||| ||||||||    
T  16887846 ctgattatgattttttttaatgaagtttagctac 16887813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 528
Target Start/End: Complemental strand, 48512407 - 48512330
Alignment:
Q  453 cccccacttaaatt--aaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactct 528  Q
    ||||||||||||||  |||||| || |||||  |||||||||||||||  |||||||| | |||||||||||||||||    
T  48512407 cccccacttaaatttaaaaaaaatatatgttatttctttttctttctttagtacacgtttgagttttttctagactct 48512330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 488 - 603
Target Start/End: Original strand, 21168972 - 21169088
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttt-ttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||  |||||||| | |||||| ||||||||||||||||| |||| |  ||| ||||  ||| |||||||| ||||   |||||||||||||    
T  21168972 ttttctttcttttgtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaatcacccctaatttgtataatc 21169071  T
Q  587 acttaatcaatcaattt 603  Q
    | ||||| | |||||||    
T  21169072 aattaatgagtcaattt 21169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 872
Target Start/End: Original strand, 24449347 - 24449402
Alignment:
Q  817 gcgtttttattttactggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    |||||||||||||||| | |||||||||||||| |||  ||| |||||||||||||    
T  24449347 gcgtttttattttactcgagtctattttaaaaatagaaccgaacctcctatttcat 24449402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 821 - 871
Target Start/End: Original strand, 23256847 - 23256897
Alignment:
Q  821 ttttattttactggtgtctattttaaaaagagattcgagcctcctatttca 871  Q
    |||||||||||| | | ||||||||||||||||  ||||||||||||||||    
T  23256847 ttttattttactagggcctattttaaaaagagagccgagcctcctatttca 23256897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 372 - 869
Target Start/End: Complemental strand, 44836994 - 44836492
Alignment:
Q  372 cggatcttggggagcgcaaggagctcaattaaattgggcctctaaaaactatgggcctnnnnnnnn---taagtatgatacccacccccacttaaattaa 468  Q
    |||| ||||| |||||||||||||||||| ||| ||| |||||||||| ||||| |||           ||||||| ||| | |||||||||||||||||    
T  44836994 cggaccttggagagcgcaaggagctcaatcaaactggacctctaaaaaatatggaccttaaaaaaaaattaagtataatatctacccccacttaaattaa 44836895  T
Q  469 aaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt------ctagactctagttctactttctagacaaaaatttgatgctatc 562  Q
    || |||||||||| |||| ||||||||||||| ||||||||| ||||||||      ||||| ||||||||||||||||  ||| |||||||||||||||    
T  44836894 aatattacatgttacttcattttctttcttcgatacacgtatgagttttttttctttctagattctagttctactttctgaacataaatttgatgctatc 44836795  T
Q  563 aaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcg 662  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| |||||||| |||||||| ||||    |||||||||||| ||||||||||||||    
T  44836794 aaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcactgaaagaatcaca----tcatttctttttcgcataaaccattcg 44836699  T
Q  663 ttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtt 762  Q
    |||| || |||||||| ||||| ||||||||||||||| ||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  44836698 tttttccctttcccacgacgtaggagtgacattccaaatgacaccgctaggtaaatttcacatctctttcacttaattttattttattttgtttcatgtt 44836599  T
Q  763 tagaagttcttgtgaatctgattttttaatgaagcttagctac-nnnnnnnnnttgcgtttttattttactggtgtctattttaaaaagagattcgagcc 861  Q
    || |||||||| ||| ||| |||||||||| || |||||||||          ||||||||||||||||||   || ||||||||||||||| |||| ||    
T  44836598 taaaagttcttatgattctaattttttaat-aaacttagctacacagaaaaaattgcgtttttattttacttaggtttattttaaaaagagagtcgaacc 44836500  T
Q  862 tcctattt 869  Q
    ||||||||    
T  44836499 tcctattt 44836492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 457 - 872
Target Start/End: Complemental strand, 37873940 - 37873519
Alignment:
Q  457 cacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttga 555  Q
    ||||| ||||||||||||||||||| ||| |||||  |||| |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||    
T  37873940 cacttcaattaaaaaattacatgttactttttttt--ttctccggtacacgtatgagtttttttctagactctagttctactttctagacataaatttga 37873843  T
Q  556 tgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaa 655  Q
    |||||||||||||||||||||||||||| ||||||||||| | ||||| |||| || |||||||||||||| ||||||||| ||||||||| ||||||||    
T  37873842 tgctatcaaaccaccatcaatttgtatagtcacttaatcagttaatttgaaaaactgtttcattgaaagaatcacaacaattatttcttttctgcataaa 37873743  T
Q  656 ccattcgttttcccttttcc-----cacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaa-ttttattttat 749  Q
    |||||||||||||| |||||      || ||||| ||||||||| ||||||||| | |||| |||||||| ||||||||||||||||| ||||||||||     
T  37873742 ccattcgttttcccctttcctacgatacgacgtaggagtgacatgccaaacgacactgttacgtaaatttcacctctctttcacttaatttttattttag 37873643  T
Q  750 tttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac-nnnnnnnnnttgcgtttttattttactggtgtctattttaaaa 848  Q
    ||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||||          || | ||||||||||||||| | |||||||||||    
T  37873642 tttgtttcatgtttaaaagttcttatgattctaattttttaatgaagcttaactacacacaaaaaattacatttttattttactggggcctattttaaaa 37873543  T
Q  849 agagattcgagcctcctatttcat 872  Q
    | ||| ||||||||||||||||||    
T  37873542 atagaatcgagcctcctatttcat 37873519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 446 - 872
Target Start/End: Original strand, 42739983 - 42740406
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttct-ttcttcggtacacgtataagttttttctagactctagttctactttctaga 544  Q
    ||||||||||  |||||||||||||||||||||||| ||| ||||||| ||||||   ||| |||| |||||||||||||||||||||||||||||| ||    
T  42739983 atacccacccttacttaaattaaaaaattacatgttacttttttttctcttcttcaagacatgtatgagttttttctagactctagttctactttctgga 42740082  T
Q  545 caaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctt 644  Q
    || || |||||||||||||||| |||||||||||||||||| ||||||| | ||||||| |||| ||||||||||||||||| | ||||||| |||||||    
T  42740083 cataagtttgatgctatcaaacaaccatcaatttgtataataacttaattagtcaatttgaaaaactatttcattgaaagaatcgcaacaattatttctt 42740182  T
Q  645 ttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttat 744  Q
    ||| |||||||| |||||||||||| ||||| || ||||| ||||||||||||||| ||  | ||||||||||  | |||| ||||||||||||||||||    
T  42740183 tttcgcataaacaattcgttttcccctttcctacgacgtaggagtgacattccaaatgaaactgttaggtaaa--tcacctatctttcacttaattttat 42740280  T
Q  745 tttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac-nnnnnnnnnttgcgtttttattttactggtgtctattt 843  Q
    ||| |||||||||||||||| |||||||| |   |||||||||||||||||| ||| | ||          || ||||||||||||||||| | ||||||    
T  42740281 tttgttttgtttcatgtttaaaagttcttct---tctgattttttaatgaagtttaaccacacaaaaaaaattacgtttttattttactggggcctattt 42740377  T
Q  844 taaaaagagattcgagcctcctatttcat 872  Q
    |||||| |||  |||||||||||||||||    
T  42740378 taaaaatagaaccgagcctcctatttcat 42740406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 501 - 872
Target Start/End: Complemental strand, 17674488 - 17674117
Alignment:
Q  501 gtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaa 600  Q
    |||||||||| ||||||| |||||||||||||  |||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  17674488 gtacacgtatgagttttt-ctagactctagtttcactttctagatataaatttgatgctattaaaccaccatcaatttgaataatcacttaatcagtcaa 17674390  T
Q  601 tttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaa 700  Q
    ||| |||| ||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||| ||||| || ||||| |||||||||||||||    
T  17674389 tttgaaaaactatttcattgaaagaatcacaacaattatttctttttcgcataaaccatttgttttcccctttcctacgacgtaagagtgacattccaaa 17674290  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
     ||| ||||||||||||||| |||| | ||||||||||||||||||| ||||||||| |||||| |||||||| ||||| ||| |||||||||||| |||    
T  17674289 tgacaccgttaggtaaatttcacctatttttcacttaattttattttgttttgtttcgtgtttaaaagttcttctgaatatgactttttaatgaagttta 17674190  T
Q  801 gctac-nnnnnnnnnttgcgtttttattttactggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
     ||||          ||| ||||| |||||||||| | |||||||||||| ||| |||| |||| ||||||||    
T  17674189 actacacaaaaagaattgtgttttgattttactggagcctattttaaaaatagagtcgaacctcttatttcat 17674117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 477 - 800
Target Start/End: Original strand, 15441195 - 15441516
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaat 576  Q
    ||||| |||||||||||||||||| ||||||| | ||||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||  ||||    
T  15441195 atgttacttctttttctttcttcgatacacgtttgagttttttctagactctagttctcctttctagacataaatataatgctatcaaaccacctacaat 15441294  T
Q  577 ttgtataatcacttaatcaatcaatttaaaaagctatttcatt-gaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcc 675  Q
    ||||||||||||||||||| |||||||| ||||||||||||||  |||||| ||||||||| | |||||||||||||||| ||||| ||||||||||| |    
T  15441295 ttgtataatcacttaatcactcaatttataaagctatttcattaaaaagaatcacaacaat-aattcttttttgcataaatcattcattttccctttt-c 15441392  T
Q  676 cacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttg 774  Q
    ||||||  | ||||||| | |||||||||||||||||||||||||| ||||||||||||||||  ||| |||||||  |||||||||||||||||||||     
T  15441393 cacaacagaagagtgacaaatccaaacgacgccgttaggtaaatttcacctctctttcactta--ttttttttattccgtttcatgtttagaagttcttc 15441490  T
Q  775 tgaatctgattttttaatgaagctta 800  Q
    ||| | ||||||||||||||||||||    
T  15441491 tgattttgattttttaatgaagctta 15441516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 457 - 805
Target Start/End: Original strand, 24556696 - 24557035
Alignment:
Q  457 cacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgat 556  Q
    ||||||||||||||||||| ||||| ||| |||||||||    ||||||||||| |||||||||||||||||| ||| |||||||  ||| ||||||| |    
T  24556696 cacttaaattaaaaaattatatgttactt-tttttcttt----ggtacacgtatgagttttttctagactctaattccactttctcaacataaatttggt 24556790  T
Q  557 gctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaac 656  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||||||| |||| |||||||||| |||||| ||||||||| |||||||||| ||||||||    
T  24556791 gctattaaaccaccatcaatttgaataatcacttaataagtcaatttgaaaaactatttcatttaaagaatcacaacaattatttctttttcgcataaac 24556890  T
Q  657 cattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgttt 756  Q
    |||||||||| | |||||| |  ||||| ||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||| |||||||     
T  24556891 cattcgtttttctttttcctatcacgtaggagtgacattccaaacgacaccgttaggtaaatttcac--ctctttcacttaattttattttgttttgtt- 24556987  T
Q  757 catgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
      |||||| |||||||| ||| ||| |||||| ||||||||||||||||    
T  24556988 -gtgtttaaaagttcttctgattctaatttttcaatgaagcttagctac 24557035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 446 - 805
Target Start/End: Complemental strand, 22387022 - 22386667
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    ||||||||| |||||||||||||||||||| ||||| ||| |||||||     | ||||| | || |||||||||||||||||||||| ||| ||| |||    
T  22387022 atacccaccaccacttaaattaaaaaattatatgttacttttttttct-----cagtacatgaatgagttttttctagactctagttccactgtctggac 22386928  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatt-tctt 644  Q
    | ||||||||||||||  |||||||||||||||| | ||||||||||||| ||||||| |||| ||||||||||||||||| ||||||||| | | | ||    
T  22386927 ataaatttgatgctatttaaccaccatcaatttgaacaatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaattaatatttt 22386828  T
Q  645 ttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttat 744  Q
    |||||||||||||||| |||||||| ||||| || ||||| |||||||||||||||||||  |||||  ||||||| || ||||||||||||||||||||    
T  22386827 ttttgcataaaccatttgttttcccctttcctacgacgtaggagtgacattccaaacgacatcgttaaataaatttcacatctctttcacttaattttat 22386728  T
Q  745 tttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||||||||| |||||| ||  |||| ||| ||||||||||||||||| |||| ||||    
T  22386727 tttattttgtttcgtgtttaaaaaatcttatgattctgattttttaatgaaacttaactac 22386667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 453 - 805
Target Start/End: Complemental strand, 27703715 - 27703365
Alignment:
Q  453 cccccacttaaattaaaaaat---tacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaa 549  Q
    ||||||||||||||||||||    || ||||| ||||||||||||||||  |||||||| | |||||||||||||||||||||||  ||| |  ||| ||    
T  27703715 cccccacttaaattaaaaaaaatatatatgttacttctttttctttctttagtacacgtttgagttttttctagactctagttctcttttttgaacataa 27703616  T
Q  550 atttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttg 649  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| |||||||  ||||||||||||| ||||||| ||||||||||||||| |||| |    
T  27703615 atttgatgctatcaaaccacccccaatttgtataatcacttaatcagtcaatttggaaagctatttcatcgaaagaatcacaacaatcatttcattttcg 27703516  T
Q  650 cataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttat 749  Q
    ||||||||||||||||| || ||| |||| ||| | |||||||| |||||||||| | ||||||||||||| ||||||| |||||||||||||||||       
T  27703515 cataaaccattcgtttttcccttttccaccacggaagagtgacaatccaaacgacactgttaggtaaatttcacctctccttcacttaattttatttc-- 27703418  T
Q  750 tttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
       |||||||||||||||||| || ||| |||||||||||||  ||||||| ||||    
T  27703417 ---gtttcatgtttagaagttattatgattctgattttttaacaaagcttaactac 27703365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 461 - 805
Target Start/End: Original strand, 50371023 - 50371367
Alignment:
Q  461 taaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgcta 560  Q
    |||| |||||||| | || || |||||||||||||||||  ||| | | |   ||| ||||||||||||||||| |||||| || | ||| |||||||||    
T  50371023 taaaataaaaaatcatattttccttctttttctttcttcaatacgcatttggatttcttctagactctagttctcctttctggatataaagttgatgcta 50371122  T
Q  561 tcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccatt 660  Q
    ||||| |||| |||||||||||||||||||||||| ||||||| |||| || |||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  50371123 tcaaatcaccctcaatttgtataatcacttaatcagtcaatttgaaaaactgtttcattgaaagaatcacaacaatcatttctttttcgcataaatcatt 50371222  T
Q  661 cgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcat 759  Q
     ||||| || || ||||||||| | ||||||| | ||||||| ||  |||||||||||||| ||||||||||||||||||||| |||||||| |||||||    
T  50371223 agtttttcccttacccacaacggaggagtgacaaatccaaacaacatcgttaggtaaatttcacctctctttcacttaatttt-ttttatttcgtttcat 50371321  T
Q  760 gtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||    
T  50371322 gtttagaagttcttatgattctgattttttaatgaagcttagctac 50371367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 464 - 805
Target Start/End: Complemental strand, 26486533 - 26486206
Alignment:
Q  464 attaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatca 563  Q
    ||||||||||||||||||  || |||||||||     |||||||||| ||||||||||| |||||||||||||||||| || | ||||||||||||||||    
T  26486533 attaaaaaattacatgttatttttttttcttta----gtacacgtatgagttttttctaaactctagttctactttctggaaataaatttgatgctatca 26486438  T
Q  564 aaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgt 663  Q
    ||||| |||||||||||||||||||||||||        | ||||||||||||||||||| || || |||||| |||||||||| |||||||| ||||||    
T  26486437 aaccatcatcaatttgtataatcacttaatc--------tgaaaagctatttcattgaaaaaatcataacaattatttctttttcgcataaactattcgt 26486346  T
Q  664 tttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgttt 763  Q
    |||||  ||||| || |||||  |||||||||||||| ||| ||||| ||||||||| ||||||  |||| |||||||||||||||||||||||||||||    
T  26486345 tttcctctttcctacgacgtagaagtgacattccaaatgacaccgtttggtaaatttcacctct--ttcaattaattttattttattttgtttcatgttt 26486248  T
Q  764 agaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    | |||||||| ||| |||||||||| ||||||||||||||||    
T  26486247 aaaagttcttctgattctgatttttaaatgaagcttagctac 26486206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 563 - 794
Target Start/End: Complemental strand, 13120939 - 13120708
Alignment:
Q  563 aaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcg 662  Q
    |||||||||| |||||| ||||||||||||||| ||||||| |||| ||||||||||||||||| ||| ||||| |||||||||| |||||||||||||     
T  13120939 aaaccaccattaatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaccacaattatttctttttcgcataaaccattca 13120840  T
Q  663 ttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtt 762  Q
    ||||||| ||||| || ||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| ||||||||| ||||    
T  13120839 ttttcccctttcctacgacgtaggagtgacattccaaacgacaccgttaggtaaatttcacctctctatcacttaattttattttgttttgtttcgtgtt 13120740  T
Q  763 tagaagttcttgtgaatctgattttttaatga 794  Q
    || |||||||| ||| ||||||||||||||||    
T  13120739 taaaagttcttctgattctgattttttaatga 13120708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 502 - 869
Target Start/End: Original strand, 12971336 - 12971704
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||||| || ||| |||| |||| ||||  ||||||||||||  ||||||||||||||||||||||| |||||    
T  12971336 tacacgtttgagttttttctagactttagttctcctatctggacataaatctgatattatcaaaccacccccaatttgtataatcacttaatcagtcaat 12971435  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||| || |||||| | ||||||    
T  12971436 ttgaaaagctatttcatcgaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccacaacggataagtgacaaatccaaa 12971535  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    |||| |||||| ||||||| ||||| ||||||||||| |||| || ||||| |||||||||| ||||| |    ||| |||||||||||||| ||| |||    
T  12971536 cgactccgtta-gtaaattctacctatctttcacttattttttttgtatttcgtttcatgttaagaagctaaactgattctgattttttaataaagttta 12971634  T
Q  801 gctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctattt 869  Q
    ||||          |||||||||||||||| | || || ||||||||| |||||  ||||||||||||||    
T  12971635 gctatacaaaaaaattgcgtttttattttattaggggtttattttaaatagagagccgagcctcctattt 12971704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 477 - 802
Target Start/End: Original strand, 5560388 - 5560713
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaat 576  Q
    ||||| ||| ||||||||||||| |||||||| | || ||||| |||||| |||||||  ||||| |||| |||| || ||||| |||||||||  ||||    
T  5560388 atgttacttttttttctttcttcagtacacgtttgagatttttttagactatagttctcatttctggacataaatctggtgctaccaaaccacccccaat 5560487  T
Q  577 ttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcat-ttcttttttgcataaaccattcgttttcccttttcc 675  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||| || ||||  |||||||| |||| ||||| |||||||    
T  5560488 ttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatcatatttttttccgcataaactattcattttctcttttcc 5560587  T
Q  676 cacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttat-tttattttgtttcatgtttagaagttctt 773  Q
    ||||||| | ||||||| | ||||||  || ||| || ||||||||  | ||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  5560588 cacaacggaggagtgacaaatccaaataacaccg-tacgtaaattt--catctctttcacttatttttttatttattttgtttcatgtttagaagttctt 5560684  T
Q  774 gtgaatctgattttttaatgaagcttagc 802  Q
     ||| || ||| ||||||||||| |||||    
T  5560685 ttgattcagatcttttaatgaagtttagc 5560713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 488 - 869
Target Start/End: Original strand, 25930518 - 25930902
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt--ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataat 585  Q
    |||||||| |||||||||||| | ||||||||  |||||||||||||||  ||| |  ||| |||| |||| ||||||||| |||   ||||||||||||    
T  25930518 ttttcttttttcggtacacgtttgagttttttgtctagactctagttctcatttttgtacataaatctgatcctatcaaactacccctaatttgtataat 25930617  T
Q  586 cacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    |||||||||| |||| || |||||||||||||||||||| | |||||||||||||| || |||| |||||||||| ||||| || ||| |||||||  ||    
T  25930618 cacttaatcagtcaacttgaaaagctatttcattgaaaggatcacaacaatcattttttctttggataaaccatttgttttacccttttccacaacagat 25930717  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga- 783  Q
    ||||||| | |||||||||| ||||||| |||||||  | |||||||||||||||||| ||||| ||  |||||| |||||||| |||| ||| |||||     
T  25930718 gagtgacaaatccaaacgacaccgttagataaattt--catctctttcacttaatttt-ttttaattcttttcatatttagaagctcttctgattctgat 25930814  T
Q  784 -ttttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctattt 869  Q
     ||||||||||||| ||||||||         || ||||||||||||| | || | ||||||| |||||||| |||||| ||||||||    
T  25930815 tttttttaatgaagtttagctacacaaaaaaattacgtttttattttattaggggcctattttcaaaagagagtcgagcttcctattt 25930902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 453 - 789
Target Start/End: Original strand, 50552374 - 50552711
Alignment:
Q  453 cccccacttaaattaaaaaat-tacatgttgcttctttttctttcttcggtacacgtataagttttttc-tagactctagttctactttctagacaaaaa 550  Q
    ||||||||||||| ||||||| || |||||   || |||||||||||  |||||||| | ||||||||  |||||||||||||| |||| |  ||| |||    
T  50552374 cccccacttaaataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaa 50552473  T
Q  551 tttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttg 649  Q
    |  ||| |||||||||||||   |||||||||||||||||||||  ||||||| ||||| |||||||||||||||| |||||||||||||| ||| || |    
T  50552474 tcggatcctatcaaaccacccctaatttgtataatcacttaatcggtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcg 50552573  T
Q  650 cataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttatttta 748  Q
     ||||||||||| |||| |||||| ||||||| || ||||||| | |||||||||| || |||| |||||||  | |||||||||||||||||| |||||    
T  50552574 tataaaccattcattttacctttttccacaacataggagtgacaaatccaaacgacaccattagataaattt--catctctttcacttaatttt-tttta 50552670  T
Q  749 ttttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     ||  |||||||||||||||||||| ||| |||||||||||    
T  50552671 attcctttcatgtttagaagttcttttgattctgatttttt 50552711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 558 - 872
Target Start/End: Complemental strand, 28885749 - 28885433
Alignment:
Q  558 ctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaac 656  Q
    |||||||||||||   ||||||||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||||||||| ||| || ||||||||    
T  28885749 ctatcaaaccacccataatttgtataatcacttaatcaatcaattttgaaagctatttcattgtaagaatcacaacaatcatttttttcttcgcataaac 28885650  T
Q  657 cattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtt 755  Q
    ||||||||||  ||||| |||||||  ||||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  ||    
T  28885649 cattcgttttatctttttccacaacagatgagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttt-ttttaattcctt 28885553  T
Q  756 tcatgtttagaagttcttgtgaatctga---ttttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaaga 851  Q
    |||||||||||||||||| | | |||||   ||||||||||||  ||| ||||         || || |||||||||||| ||| |||||||||||||||    
T  28885552 tcatgtttagaagttcttctaattctgatttttttttaatgaaatttaactacacaaaaaaattacg-ttttattttactaggtatctattttaaaaaga 28885454  T
Q  852 gattcgagcctcctatttcat 872  Q
    || ||||||||||||||||||    
T  28885453 gagtcgagcctcctatttcat 28885433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 514 - 789
Target Start/End: Original strand, 10109662 - 10109940
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||||||||||| |||| |  ||| ||||| ||| ||||||||||||||  |||||||||||||||||||||| |||||||  ||||| ||    
T  10109662 ttttttctagactctagttctcctttttgtacataaattggatcctatcaaaccaccactaatttgtataatcacttaatcagtcaatttggaaagcaat 10109761  T
Q  614 ttcattgaaagaaccacaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||||| ||| || |||||||| ||||||||| || ||| |||||||  | ||||||||  |||||||||||||||||    
T  10109762 ttcattgaaagaatcacaacaatcatttttttcttcgcataaactattcgttttacccttttccacaacagaggagtgacaaatccaaacgacgccgtta 10109861  T
Q  712 ggtaaattttacctctctttcacttaattttattttatt---ttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||||||| ||||||  ||||||||||||| |||| ||   |  |||||||||||||||||||| ||| ||||| |||||    
T  10109862 gataaatttcacctct--ttcacttaattttttttttttaattcctttcatgtttagaagttcttctgattctgagttttt 10109940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 446 - 789
Target Start/End: Original strand, 30899528 - 30899876
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttt--ttctagactctagttctactttctag 543  Q
    |||||||||||||||||||| |||||  || |||||   || |||||||||||  |||||||| | ||||||  ||||||||||||||||| |||| |      
T  30899528 atacccacccccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgt 30899627  T
Q  544 acaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttct 643  Q
    ||| ||||  ||| |||||||| ||||   |||||||||||||||||||| | |||||||  ||||||||||||||||||||| |||||||||||||| |    
T  30899628 acataaatcggatcctatcaaatcacccctaatttgtataatcacttaattagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 30899727  T
Q  644 tt---tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaa- 738  Q
    ||   || |||||||||||||||||| || ||| |||||||  | || |||| | |||||||||| ||||||| ||||||| ||  |||||||||||||     
T  30899728 ttttcttcgcataaaccattcgttttacccttttccacaacagaggaatgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaat 30899825  T
Q  739 ttttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |||| ||||| ||  |||||||||||||||||||| ||| |||||||||||    
T  30899826 tttttttttaattcctttcatgtttagaagttcttctgattctgatttttt 30899876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 446 - 789
Target Start/End: Complemental strand, 14084892 - 14084547
Alignment:
Q  446 atacccaccc-ccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctaga 544  Q
    |||||||||| |||||||||| |||||  || |||||   || |||||||||||| ||||| || | | ||||||||||||||||||||| |||| |  |    
T  14084892 atacccaccctccacttaaataaaaaatatatatgttatatcattttctttcttcagtacaggtttgaattttttctagactctagttctcctttttgta 14084793  T
Q  545 caaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatca--tttc 642  Q
    || |||| |||| |||||||| ||||   ||  |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| |||||  |||     
T  14084792 cataaatctgatcctatcaaatcacccctaaaatgtataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaataatcaattttt 14084693  T
Q  643 ttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattt 741  Q
    || || |||||||||||||||||| || ||  |||||||  | ||||||| | |||||||||| || |||| ||||||| ||  |||||||| |||||||    
T  14084692 ttcttcgcataaaccattcgttttacccttctccacaacagaggagtgacaaatccaaacgacaccattagataaatttcac--ctctttcatttaattt 14084595  T
Q  742 tattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||||| ||  |||||||||||||||||||| ||| |||||||||||    
T  14084594 ttttttaattcctttcatgtttagaagttcttctgattctgatttttt 14084547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 488 - 789
Target Start/End: Complemental strand, 18128086 - 18127785
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt--ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataat 585  Q
    |||||||||||  |||||||| | ||||||||  ||||| ||||||||| |||| |  ||  ||||  ||| |||||||||||||   ||||||||||||    
T  18128086 ttttctttctttagtacacgtttgagttttttttctagattctagttctccttt-tgtacgtaaatcggatcctatcaaaccacccataatttgtataat 18127988  T
Q  586 cacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgta 684  Q
    |||||||||| ||||||| |||||||||||||||| ||||| ||||||||| |||| ||| || |||||||| ||||||||| || ||| |||||||  |    
T  18127987 cacttaatcagtcaatttgaaaagctatttcattgcaagaatcacaacaattatttttttcttcgcataaactattcgttttacccttttccacaacaaa 18127888  T
Q  685 tgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga 783  Q
     ||||||| | |||||||||| ||||||||||||||||||  ||||||||||||||||| ||||| ||| ||| |||||||||||||||| ||| ||||     
T  18127887 ggagtgacaaatccaaacgacaccgttaggtaaattttac--ctctttcacttaatttt-ttttaatttctttaatgtttagaagttcttatgattctgt 18127791  T
Q  784 tttttt 789  Q
    ||||||    
T  18127790 tttttt 18127785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 453 - 789
Target Start/End: Complemental strand, 48722556 - 48722214
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt---ctagactctagttctactttctagacaaaa 549  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  |||||||| | ||||||||   |||||||||| ||||  ||| |  ||| ||    
T  48722556 cccccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttttctagactctatttctcatttttgtacataa 48722457  T
Q  550 atttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-ttt 648  Q
    ||  ||| |||||||||||||   |||||||||||||||||||||| |||||||  |||||||||||||||||| || |||||||||||||| ||| ||     
T  48722456 atcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaataatcacaacaatcatttttttcttc 48722357  T
Q  649 gcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaa---ttttat 744  Q
    |||||||||||||||||| || ||| |||||||  | ||||||| | |||||||||| ||||||| ||||||| ||  |||||| ||||||   |||| |    
T  48722356 gcataaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--ctcttttacttaatattttttt 48722259  T
Q  745 tttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||    
T  48722258 tttaatttctttcatgtttagaagttcttctgattctgatttttt 48722214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 488 - 805
Target Start/End: Complemental strand, 30005052 - 30004737
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt---ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataa 584  Q
    |||||||| |||||||||||| | ||||||||   |||||||||| |||| |||| |  ||| ||||  ||| |||||||||||      ||||||||||    
T  30005052 ttttcttttttcggtacacgtttgagtttttttttctagactctacttctcctttttgtacataaatccgatcctatcaaacca------atttgtataa 30004959  T
Q  585 tcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgta 684  Q
    ||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||| || ||  ||||||||||||||||| |||||| |||||||  |    
T  30004958 tcacttaatcaattaatttgaaaagctatttcattgaaagaatcgcaacaatcatttgttcttcccataaaccattcgttttacctttttccacaacaga 30004859  T
Q  685 tgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga 783  Q
     ||||||| | | |||||||  ||||||| ||||||| ||  || |||||||||||||| ||||| ||  |||||||||||||||||||| ||| |||||    
T  30004858 ggagtgacaaattcaaacgataccgttagataaatttcac--ctttttcacttaatttttttttaattcctttcatgtttagaagttcttctgattctga 30004761  T
Q  784 ttt--tttaatgaagcttagctac 805  Q
    |||  || ||||||| ||||||||    
T  30004760 tttaattcaatgaagtttagctac 30004737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 453 - 760
Target Start/End: Complemental strand, 6333699 - 6333396
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttt-tctagactctagttctactttctagacaaaaat 551  Q
    |||||| |||||| |||||| || ||||| ||| |||||||||||||||||||||| | ||||||| | ||||||||||||||  || ||  ||| ||||    
T  6333699 cccccatttaaataaaaaaaatatatgttacttatttttctttcttcggtacacgtttgagtttttctttagactctagttctcattcctgtacataaat 6333600  T
Q  552 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgca 651  Q
     |||| ||||||||||| | | ||| |||| ||||||||||||| |||| ||  |||| ||||| ||| |||||| |||||||||||||| ||||  |||    
T  6333599 ctgatactatcaaaccatcct-aatctgtaaaatcacttaatcagtcaaattggaaagttattttattaaaagaatcacaacaatcattttttttccgca 6333501  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtg-acattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    ||||||||||| ||||||  ||||||||||| ||||||| | | |||||||||| | |||||||||||||  | |||||||||||||||||| |||||||    
T  6333500 taaaccattcgctttccc--ttcccacaacgaatgagtgaagaatccaaacgacactgttaggtaaattt--catctctttcacttaatttt-ttttatt 6333406  T
Q  751 ttgtttcatg 760  Q
    | ||||||||    
T  6333405 tcgtttcatg 6333396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 484 - 792
Target Start/End: Original strand, 1269471 - 1269772
Alignment:
Q  484 ttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtata 583  Q
    |||||||||||| ||| |||||||| | |||||||||||||||||| |||| ||||||||||| |||| ||||||||| ||||||||  ||||||||| |    
T  1269471 ttctttttcttttttctgtacacgtttgagttttttctagactctaattctcctttctagacataaatctgatgctatgaaaccacccccaatttgtaaa 1269570  T
Q  584 atcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaa-cg 682  Q
    || | |        |||||| ||||||||||||||| |||||| |||||||||||||| ||||  ||||| | ||||||||||| | |||||||||| ||    
T  1269571 attagt--------caatttgaaaagctatttcattaaaagaatcacaacaatcattt-ttttccgcatata-cattcgttttctcctttcccacaagcg 1269660  T
Q  683 tatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaat-tttattttattttgtttcatgtttagaagttcttgtgaatc 780  Q
     | ||||||| | |||||||||| |||||  |||||||| |||| ||||||||||| |  || |||||||| ||||||||||||||||||||  ||| ||    
T  1269661 gaggagtgacaaatccaaacgacaccgttccgtaaatttcacctttctttcacttattaatttttttatttcgtttcatgtttagaagttctattgattc 1269760  T
Q  781 tgattttttaat 792  Q
    ||||||||||||    
T  1269761 tgattttttaat 1269772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 514 - 871
Target Start/End: Complemental strand, 17487405 - 17487042
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   ||||| |||||||||||||| |||||||||  |||| |||    
T  17487405 ttttttctagactctagttctcctttttttacataaatcggatcctatcaaaccacccctaatttatataatcacttaataaatcaatttggaaagttat 17487306  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||  | ||| |||||||  | ||||||||  ||||||| |||||||||    
T  17487305 ttcattgaaagaatcacaacaatcatttttttctttgcataaaccattcgttttatccttttccacaacagaggagtgacaaatccaaacaacgccgtta 17487206  T
Q  712 ggtaaattttacctctctttcacttaattttattttatt---ttgtttcatgtttagaagttcttgtgaatctga---ttttttaatgaagcttagctac 805  Q
    | ||||||| ||||||  ||||||||||||| |||| ||   |  |||||||||||||| ||||| ||| |||||   ||||| ||||||  ||||||||    
T  17487205 gataaatttcacctct--ttcacttaattttttttttttaattcctttcatgtttagaacttcttctgattctgagtttttttcaatgaaatttagctac 17487108  T
Q  806 nnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttca 871  Q
             || || ||||||||||||  | | |||||||||||||||| |||||||||||||||||    
T  17487107 acaaaaaaattacg-ttttattttactaagggcctattttaaaaagagagtcgagcctcctatttca 17487042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 488 - 773
Target Start/End: Original strand, 6150636 - 6150922
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttt-ttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    ||||||||||||| || |||| | |||||| ||||||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   ||||| |||||||    
T  6150636 ttttctttcttcgctatacgtttgagtttttttctagactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttatataatc 6150735  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatc-atttcttttttgcataaaccattcgtttt-cccttttcccacaacgta 684  Q
    | ||||||| ||||||| |||||||||||||||||||||| |||||||||| |||| || ||  ||||||||||||||||| || |||| |||||||  |    
T  6150736 atttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcaattttttcttcacataaaccattcgttttaccttttttccacaacaga 6150835  T
Q  685 tgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
     ||||||| | |||||||||| ||||||| ||||||| ||  || |||||||||||||| ||||| ||  ||||||||||||||||||||    
T  6150836 ggagtgacaaatccaaacgacaccgttagataaatttcac--ctatttcacttaatttt-ttttaattcctttcatgtttagaagttctt 6150922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 548 - 805
Target Start/End: Original strand, 9777389 - 9777648
Alignment:
Q  548 aaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaa-gaaccacaacaatcatttctttt 646  Q
    |||| |||||||| |||||||||  |||||| |||||||||| ||||| ||||||| || | |||||||| | ||| ||| ||||||||||||| | |||    
T  9777389 aaatctgatgctaccaaaccacccccaatttatataatcactcaatcagtcaatttgaataactatttcaataaaaagaatcacaacaatcattaccttt 9777488  T
Q  647 ttgcataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacgacgccgttaggtaaattttacctctctttcacttaattttatt 745  Q
    |  ||||||||||| |||| |||||| |||| || | |||| ||| |  |||||||||| ||||||||||||||| || |||||||||||||||||| ||    
T  9777489 tctcataaaccatttgtttccccttt-cccataatggatgaatgataaatccaaacgacaccgttaggtaaatttcacttctctttcacttaattttttt 9777587  T
Q  746 tt-attttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    || |||| |||||||||||||||||| || | | |||||||||||||||||| ||||||||    
T  9777588 tttatttagtttcatgtttagaagttattctaattctgattttttaatgaagtttagctac 9777648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 488 - 674
Target Start/End: Complemental strand, 12884286 - 12884098
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||  |||||||| | |||||||| ||||||||||||| | |||| |  ||| ||||  ||| |||||||||||||   |||||||||||||    
T  12884286 ttttctttctttagtacacgtttgagtttttttctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 12884187  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgtttt-cccttttc 674  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||| ||||||||    
T  12884186 acttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatcattttttcttcgcataaaccattcgttttacccttttc 12884098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 574 - 871
Target Start/End: Original strand, 9 - 310
Alignment:
Q  574 aatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttt 672  Q
    |||||||||||||||||||||| |||||||  ||||  ||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||    
T  9 aatttgtataatcacttaatcagtcaatttggaaagtgatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccctt 108  T
Q  673 tcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttc 771  Q
    | | |||||  | ||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  |||||||||| |||||||    
T  109 ttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttggaagttc 206  T
Q  772 ttgtgaatctga----ttttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctccta 866  Q
    || ||| | |||    ||||||||||||| ||||||||         || || |||||||||||| || | ||||||||||||||||  |||||||||||    
T  207 ttttgattttgattttttttttaatgaagtttagctacacaaaaaaattacg-ttttattttactgggagcctattttaaaaagagaaccgagcctccta 305  T
Q  867 tttca 871  Q
    |||||    
T  306 tttca 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 446 - 789
Target Start/End: Complemental strand, 29208288 - 29207946
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtat-aagttttttctagactctagttctactttctaga 544  Q
    |||| ||||||||||||||| ||||||| | |||||   || ||||||||||||||||||||| | || |||||||||||||||||||||  ||| |  |    
T  29208288 atactcacccccacttaaataaaaaaat-atatgttatatccttttctttcttcggtacacgtttgaatttttttctagactctagttctcttttttgta 29208190  T
Q  545 caaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctt 644  Q
    || |||| | ||  ||||||||||||   |||||||||||||| ||||||| ||||| |  ||  ||||||||||||||||| |||||||||||||| ||    
T  29208189 cataaatctaatcatatcaaaccacccctaatttgtataatcatttaatcagtcaatctggaagtctatttcattgaaagaatcacaacaatcatttttt 29208090  T
Q  645 t-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaatttt 742  Q
    | || |||||||||||||||||| || ||| ||||||   | ||||||| | |||||| ||| ||||| | |||||||  | ||||||| ||||||||||    
T  29208089 tcttcgcataaaccattcgttttacccttttccacaatagaggagtgacaaatccaaatgacaccgttggataaattt--catctcttttacttaatttt 29207992  T
Q  743 attttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     ||| | | | |||||| ||||||||||||| ||| |||||||||||    
T  29207991 -tttaaatgtctttcatatttagaagttcttctgattctgatttttt 29207946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 455 - 789
Target Start/End: Complemental strand, 51110284 - 51109949
Alignment:
Q  455 cccacttaaattaaaaaat-tacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatt 552  Q
    ||||||||||| ||||||| || |||||   || |||||||||||  |||||||| | |||||||| ||||||| ||||| | |||| |  ||| ||||     
T  51110284 cccacttaaataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactatagttatcctttttgtacataaatc 51110185  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatca-tttcttttttgca 651  Q
     ||| |||||||||||||   ||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| | ||| || || |||    
T  51110184 ggatcctatcaaaccacccctaatttctataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaacaataagttttttcttcgca 51110085  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    ||||||||| |||||  | ||| |||||||  | ||||||| | | |||| ||| ||||||| ||||||| ||  ||||||||||||||||| ||||| |    
T  51110084 taaaccatttgttttatccttttccacaacaaaggagtgacaaattcaaatgacaccgttagataaatttcac--ctctttcacttaatttt-ttttaat 51109988  T
Q  751 ttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |  |||||||||||||| ||||| | | |||||||||||    
T  51109987 tcctttcatgtttagaaattcttctaattctgatttttt 51109949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 488 - 805
Target Start/End: Complemental strand, 20905437 - 20905115
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttt--ttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataat 585  Q
    |||||||||||  |||||||| | ||||||  ||||||||||||||||| |||| |  ||| |||| | || ||||||||||| |   ||||||||||||    
T  20905437 ttttctttctttagtacacgtttgagttttatttctagactctagttctcctttttgtacataaatctaatcctatcaaaccagccctaatttgtataat 20905338  T
Q  586 cacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgtttt-cccttttcccacaacgt 683  Q
    |||||| ||| |||||||  ||  ||||||||||||||||| ||||||||| |||| ||| || | |||||||||||||||| ||||||| |||||||      
T  20905337 cacttattcagtcaatttggaagtctatttcattgaaagaatcacaacaataatttttttcttcgtataaaccattcgttttaccctttttccacaacag 20905238  T
Q  684 atgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctg 782  Q
    | ||||||| | |||||||||| ||||| | ||||||| ||  | ||||||||||| ||| ||||| ||  |||||| ||||||||||||| | | ||||    
T  20905237 aggagtgacaaatccaaacgacaccgttggataaatttcac--cactttcacttaagttttttttaattcctttcatatttagaagttcttcttattctg 20905140  T
Q  783 --attttttaatgaagcttagctac 805  Q
       ||||||||||||| ||||||||    
T  20905139 gttttttttaatgaagtttagctac 20905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 488 - 805
Target Start/End: Original strand, 52055466 - 52055786
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttct--agactctagttctactttctagacaaaaatttgatgctatcaaacca-ccatcaatttgtataa 584  Q
    |||||||||||| ||| |||| | |||||||| |  ||||||||||||| |||| |  ||| |||| | ||  |||||||| | |||| ||||| |||||    
T  52055466 ttttctttcttcagtatacgtttgagttttttttttagactctagttctcctttttgtacataaatctaatcatatcaaactatccat-aatttatataa 52055564  T
Q  585 tcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatca-tttcttttttgcataaaccattcgttttcccttttcccacaacgt 683  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||| |  || |||||||||||||||||| || |||  ||||| |     
T  52055565 tcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaatcagtttttccttcgcataaaccattcgttttacccttttacacaaag- 52055663  T
Q  684 atgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctg 782  Q
    | ||||||| | || ||||||| ||||||| ||||||||||  |||||||||||| || | ||||| ||  ||||||| ||||||||| || ||| ||||    
T  52055664 aggagtgacaaatctaaacgacaccgttagataaattttac--ctctttcacttatttattttttaattcctttcatgcttagaagtttttctgattctg 52055761  T
Q  783 a--ttttttaatgaagcttagctac 805  Q
    |  ||||||||||||| ||||||||    
T  52055762 attttttttaatgaagtttagctac 52055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 512 - 632
Target Start/End: Original strand, 38263804 - 38263924
Alignment:
Q  512 agttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagct 611  Q
    |||||||||||||||||||||| ||||| | |||| |||||||||||||| ||||||| ||| ||||| || || ||||||||| |||||||||||| ||    
T  38263804 agttttttctagactctagttccactttttggacataaatttgatgctattaaaccactatcgatttgaattattacttaatcagtcaatttaaaaaact 38263903  T
Q  612 atttcattgaaagaaccacaa 632  Q
    |||||||||| |||| |||||    
T  38263904 atttcattgatagaatcacaa 38263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 483 - 743
Target Start/End: Complemental strand, 31369541 - 31369302
Alignment:
Q  483 cttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtat 582  Q
    ||||||||||||||||||  ||| || | ||||||||||| |||||| |||| |||||| |||| |||| ||||| |||||||||||  |||||||||||    
T  31369541 cttctttttctttcttcga-acatgtttgagttttttctaaactctaattctcctttctggacataaatctgatgttatcaaaccactttcaatttgtat 31369443  T
Q  583 aatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacg 682  Q
    |||||||||||  |||             |||||||| |||||| ||||| |||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  31369442 aatcacttaat--atc-------------atttcattaaaagaatcacaaaaatcatttcttttttgcataaaccattcatttttccttatcccacaacg 31369358  T
Q  683 tatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaatttta 743  Q
     | |  |||     ||||| || || |||| ||||||| ||||||||||||||| ||||||    
T  31369357 gagggatga-----caaacaacaccattagataaatttcacctctctttcactttatttta 31369302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 488 - 681
Target Start/End: Complemental strand, 33124781 - 33124584
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttct-agactcta--gttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataa 584  Q
    |||||||||||  |||||||| | |||||||| | ||||||||  ||||| |||| |  ||| ||||  ||| |||| ||||||||   |||||||||||    
T  33124781 ttttctttctttagtacacgtttgagtttttttttagactctatagttctcctttttctacataaatcggatcctattaaaccacctctaatttgtataa 33124682  T
Q  585 tcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaac 681  Q
    ||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||| ||| ||  ||||||||||||||| | || ||| |||||||    
T  33124681 tcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcacataaaccattcgttataccattttccacaac 33124584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 477 - 646
Target Start/End: Original strand, 3907377 - 3907545
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaat 576  Q
    ||||| ||||||||||||| ||  |||||||| |||||||||| |||||| || || | |||| |  ||| ||||  |||| |||||||||||   ||||    
T  3907377 atgttacttctttttctttttttagtacacgtttaagttttttttagactttattttttctttatgaacataaatacgatggtatcaaaccactc-caat 3907475  T
Q  577 ttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttt 646  Q
    ||||||||||| ||||||||||||||| ||||  |||||||||||||||| || || ||| |||||||||    
T  3907476 ttgtataatcatttaatcaatcaatttgaaaaattatttcattgaaagaatcataaaaataatttctttt 3907545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 561
Target Start/End: Complemental strand, 13121863 - 13121752
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||| |||||||||||||||||||||| || ||||| ||| ||||||||    | | |||||||| ||||||||||| |||||||||| ||||||| ||     
T  13121863 atacacacccccacttaaattaaaaaagtatatgttacttttttttctt----cagcacacgtatgagttttttctatactctagttccactttctggat 13121768  T
Q  546 aaaaatttgatgctat 561  Q
    | ||||||||||||||    
T  13121767 ataaatttgatgctat 13121752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 618 - 805
Target Start/End: Complemental strand, 52240554 - 52240366
Alignment:
Q  618 ttgaaagaaccacaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacgacgccgttaggta 715  Q
    ||||||||| |||||||||||||| ||| || ||||||| ||||| |||| || ||| |||||||  | ||| ||||  | |||||||| | ||||| ||    
T  52240554 ttgaaagaatcacaacaatcatttttttcttcgcataaatcattcattttgcccttttccacaacagaggagcgacaaattcaaacgacactgttagata 52240455  T
Q  716 aattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatt--ttttaatgaagcttagctac 805  Q
    ||||| ||||||  ||||||||||||| ||||| ||  |||||| ||||||||||||| ||| |||||||  ||||||||||| ||||||||    
T  52240454 aatttcacctct--ttcacttaatttt-ttttaattcctttcatatttagaagttcttctgattctgattttttttaatgaagtttagctac 52240366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 725 - 805
Target Start/End: Complemental strand, 39080531 - 39080452
Alignment:
Q  725 tctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    |||||||| |||||| || ||||||||  |||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  39080531 tctctttcgcttaatatt-ttttatttcatttcatgtttagaagttcttatgattctgatttttcaatgaagcttagctac 39080452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 617
Target Start/End: Complemental strand, 32810459 - 32810370
Alignment:
Q  526 tctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttca 617  Q
    ||||||||| |||| | ||||| ||||| ||||||| |||| | |   |||||| ||||||||||||||||||||||| |||||||||||||    
T  32810459 tctagttcttctttttggacaagaatttaatgctattaaactatct--aatttgaataatcacttaatcaatcaatttgaaaagctatttca 32810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 789
Target Start/End: Complemental strand, 33124551 - 33124489
Alignment:
Q  726 ctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    ||||||||||||||||| ||||| || |||||||||||| |||||||| ||| ||||| |||||    
T  33124551 ctctttcacttaatttt-ttttaattcgtttcatgtttaaaagttcttctgattctgaattttt 33124489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 838 - 871
Target Start/End: Complemental strand, 20905082 - 20905049
Alignment:
Q  838 ctattttaaaaagagattcgagcctcctatttca 871  Q
    |||||||||||||||| |||||||||||||||||    
T  20905082 ctattttaaaaagagagtcgagcctcctatttca 20905049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-105; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 459 - 785
Target Start/End: Complemental strand, 3628923 - 3628598
Alignment:
Q  459 cttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgc 558  Q
    |||||||||||||||| |||||| ||  |||||||| |||| |||||||||| ||||||||||||||||||||||||| |||| | || |||||||||||    
T  3628923 cttaaattaaaaaattgcatgttactcttttttctt-cttcagtacacgtatgagttttttctagactctagttctacattctggtcataaatttgatgc 3628825  T
Q  559 tatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaacca 658  Q
    |||||||||||||| ||||||||||||||| |||||| ||||||| ||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  3628824 tatcaaaccaccattaatttgtataatcacataatcagtcaatttgaaaagttatttcattgaaagaatcacaacaattatttctttttcgcataaacca 3628725  T
Q  659 ttcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttca 758  Q
    |||||||| || ||||| || ||||| ||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  3628724 ttcgtttttccgtttcctacgacgtaggagtgacattccaaacgacacagttaggtaaatttcacctctctttcacttaattttattttgttttctttca 3628625  T
Q  759 tgtttagaagttcttgtgaatctgatt 785  Q
    |||||| |||||||| ||| |||||||    
T  3628624 tgtttaaaagttcttttgattctgatt 3628598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 453 - 801
Target Start/End: Complemental strand, 32098361 - 32098012
Alignment:
Q  453 cccccacttaaattaaaaaat-tacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaat 551  Q
    ||||||||||| ||||||||| || ||||| ||||||||||||||||| |||||||| | ||||||||||||||||||||| | |||| | |||| ||||    
T  32098361 cccccacttaa-ttaaaaaatatatatgttacttctttttctttcttcagtacacgtttgagttttttctagactctagttatcctttttggacataaat 32098263  T
Q  552 ttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgca 651  Q
    ||||||||||||||||||  | ||||||||| |||||||||||| |||||||  ||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  32098262 ttgatgctatcaaaccactcttaatttgtatgatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaattatttcttttttgca 32098163  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    ||||||||||||||||||  ||||||||||  | ||||||| | |||||||||| |||||| |||||||| || |||||||||||||||||| |||||||    
T  32098162 taaaccattcgttttccccattcccacaacagaggagtgacgaatccaaacgacaccgttacgtaaatttcacttctctttcacttaatttttttttatt 32098063  T
Q  751 ttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttag 801  Q
    | ||||||||||||||||||| | ||| |  ||||||||||||| ||||||    
T  32098062 tcgtttcatgtttagaagttcatctgatttcgattttttaatgatgcttag 32098012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 502 - 872
Target Start/End: Complemental strand, 34524085 - 34523717
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||||| || ||| |||| |||| || | |||||||||||||  ||||||||||||||||||||||| |||||    
T  34524085 tacacgtttgagttttttctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaat 34523986  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||| |||||||||||| || |||||| | ||||||    
T  34523985 ttgaaaagctatttcattgaaagaatcacaacaatcatttctttttcatataaaccattcgttttcccctttcccacaacggataagtgacaaatccaaa 34523886  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    |||| ||||||  |||||| |||  ||||||||||||||||| || ||||| |||||||||||||||| |||| ||| ||||| |||||||| |||||||    
T  34523885 cgacaccgtta-ttaaattctac--ctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctga-tttttaataaagctta 34523790  T
Q  801 gctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    |||||         |||||||||||||||| | || | |||||||||| |||||  |||||||||||||||||    
T  34523789 gctacacaaaaaaattgcgtttttattttattgggggcctattttaaatagagagccgagcctcctatttcat 34523717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 502 - 805
Target Start/End: Original strand, 12531489 - 12531792
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||||| || ||   ||| |||| |  | ||||||||| |||  ||||||||||||||||||||||| |||||    
T  12531489 tacacgtttgagttttttctagactttagttctcctatccgaacataaatcttgtactatcaaactacctccaatttgtataatcacttaatcagtcaat 12531588  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||| |||||||| |||||||||||| || | |||| | | ||||    
T  12531589 ttaaaaatctatttcattgaaagaatcacaacaatcatttctttttcacataaaccatttgttttcccctttcccacaacggataaatgacaaattcaaa 12531688  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    ||||||||||| ||||||| |||||||||||||||||||||| || ||||| |||||||||||||||| |||| | | |||||||||||||| |||||||    
T  12531689 cgacgccgtta-gtaaattatacctctctttcacttaatttttttatatttcgtttcatgtttagaagctcttcttattctgattttttaataaagctta 12531787  T
Q  801 gctac 805  Q
    |||||    
T  12531788 gctac 12531792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 454 - 805
Target Start/End: Original strand, 42075996 - 42076342
Alignment:
Q  454 ccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaattt 553  Q
    |||||||||||||||||||||||||||| || ||||||  |||||  |||||||    |||| ||| ||||||||| |||||||||||  ||| ||||||    
T  42075996 ccccacttaaattaaaaaattacatgttact-cttttt--ttcttaagtacacg----agttctttttagactctaattctactttctgaacataaattt 42076088  T
Q  554 gat-gctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt--gc 650  Q
      | |||||||||| | |||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||| || || ||| |||  ||||||  ||    
T  42076089 ttttgctatcaaactatcatcaatttgtataataacttaatcaatcaatttgaaaagctataacattgaaagaatcataataataattatttttttccgc 42076188  T
Q  651 ataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    |||||| |||||||||||| ||| | || | ||| ||||||||||||||| ||| ||||||||||||||| |||| ||||||||||||||||||||| ||    
T  42076189 ataaactattcgttttccccttttctacga-gtaggagtgacattccaaatgacaccgttaggtaaatttcacctatctttcacttaattttattttgtt 42076287  T
Q  751 ttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||||||| ||||    
T  42076288 ttgtttcatgtttaaaagttcttttgattctgattttttaatgaagcttatctac 42076342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 502 - 792
Target Start/End: Complemental strand, 39698072 - 39697782
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||||| || ||| | || ||||||| | |||||||||||||| |||||||||| |||| ||||| | |||||    
T  39698072 tacacgtttgagttttttctagactttagttctcctatcttggcataaatttggtactatcaaaccaccaccaatttgtatgatcatttaattagtcaat 39697973  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| | |||||||||||| || |||||| | ||||||    
T  39697972 ttgaaaagctatttcattgaaagaatcacaacaattatttcttttttacataaaccattcgttttcgcctttcccacaacggataagtgacaaatccaaa 39697873  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaat 792  Q
     ||| | |||| ||||||| ||||||||||||||||| |||| || ||||| |||||||||||||||  |||| ||| ||||||||||||||    
T  39697872 tgacactgtta-gtaaattctacctctctttcacttattttttttgtatttcgtttcatgtttagaaactcttctgattctgattttttaat 39697782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 456 - 646
Target Start/End: Original strand, 35874807 - 35875000
Alignment:
Q  456 ccacttaaattaaaaaattacatgttgc-ttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttg 554  Q
    |||||||||||||||||||||||||| | || ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || | |||||||    
T  35874807 ccacttaaattaaaaaattacatgttacattttttttctttcttcagtacacgtatgagttttttctagactctagttctactttctggatataaatttg 35874906  T
Q  555 atgctatcaaaccac--catcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttt 646  Q
    |||||||||||||||   ||||||||||||||||||||||||  ||||||| |||| ||||||| | ||||||||||||||||| |||||||||    
T  35874907 atgctatcaaaccactatatcaatttgtataatcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaattatttctttt 35875000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 502 - 773
Target Start/End: Complemental strand, 23567408 - 23567138
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | || |||||||||||| |||||||  | |||  ||| |||| || | |||||||||||||  ||||||||||||||||||||||| |||||    
T  23567408 tacacgtttgaggtttttctagactttagttctcttatctgaacataaatctgctactatcaaaccacccccaatttgtataatcacttaatcagtcaat 23567309  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||  ||||||||||||||| | ||||||||| ||||||||||  ||||||||||||||||| ||||||||||||||| || | |||| | ||||||    
T  23567308 ttgaaatactatttcattgaaagtatcacaacaatgatttctttttcacataaaccattcgtttttccttttcccacaacggataaatgacaaatccaaa 23567209  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    ||||||||||| ||||||| |||| ||||||||||||||||| || ||||| |||||||||||||||| ||||    
T  23567208 cgacgccgtta-gtaaattctaccactctttcacttaatttt-ttgtatttcgtttcatgtttagaagctctt 23567138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 590 - 795
Target Start/End: Complemental strand, 36515202 - 36514996
Alignment:
Q  590 taatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaacgtatgag 688  Q
    |||||| | |||||||||| ||||||||||||||||| ||||||||| |||| ||| || ||||||| |||| |||||||| ||||| || ||||| |||    
T  36515202 taatcagttaatttaaaaaactatttcattgaaagaatcacaacaattatttttttcttcgcataaatcatttgttttcccatttcctacgacgtaggag 36515103  T
Q  689 tgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttt 788  Q
    |||||||||||||||| ||||||| ||||||| | |||||||||||||||||||||||| ||||||||| |||||| |||||||| ||| ||||||||||    
T  36515102 tgacattccaaacgacaccgttagataaatttcagctctctttcacttaattttattttgttttgtttcgtgtttaaaagttcttctgattctgattttt 36515003  T
Q  789 taatgaa 795  Q
    |||||||    
T  36515002 taatgaa 36514996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 488 - 789
Target Start/End: Complemental strand, 18420758 - 18420456
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||  |||||||| | |||||||| | ||||||||||||| |||| |  ||| ||||  ||| ||||||||||||  | |||||||||||||    
T  18420758 ttttctttctttagtacacgtttgagtttttttccagactctagttctcctttttgtacataaatcagatcctatcaaaccacacttaatttgtataatc 18420659  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    ||||||||| ||||||| ||||||| |||||||||||||| |||||||||||||| ||| || |||||||||||||||||| ||||||  ||||||  |     
T  18420658 acttaatcagtcaatttgaaaagctgtttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccttttttcacaacagag 18420559  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
    ||||||| | |||||||||| ||||||| ||||||| ||  || |||||||||||||| ||||| ||  ||||||||||||||||| || ||| ||||||    
T  18420558 gagtgacaaatccaaacgacaccgttagataaatttcac--ctttttcacttaatttttttttaattcctttcatgtttagaagttattctgattctgat 18420461  T
Q  785 ttttt 789  Q
    |||||    
T  18420460 ttttt 18420456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 488 - 789
Target Start/End: Original strand, 13585214 - 13585515
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||  |||||||| | |||||||| ||||||||||||| |  ||| |  ||| ||||  ||| |||||||||||||   |||||||||||||    
T  13585214 ttttctttctttagtacacgtttgagtttttttctagactctagttttcttttttgtacataaatcagatcctatcaaaccacccctaatttgtataatc 13585313  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    | ||||||| |||||||  ||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||| |||||||  |     
T  13585314 aattaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagag 13585413  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
    ||||||| | |||||||||||||||||| ||||||| ||  || |||||||||||||| ||||| ||  |||||||||||||||||||| ||| ||||||    
T  13585414 gagtgacaagtccaaacgacgccgttagataaatttcac--ctttttcacttaatttt-ttttaattcctttcatgtttagaagttcttctgattctgat 13585510  T
Q  785 ttttt 789  Q
    |||||    
T  13585511 ttttt 13585515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 488 - 789
Target Start/End: Complemental strand, 43968219 - 43967918
Alignment:
Q  488 ttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||||||||||  |||||||| | |||||||| ||||||||||||||| |||| |  ||| ||||  ||| ||||||||||||    |||||||||||||    
T  43968219 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccactcctaatttgtataatc 43968120  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| |  ||| |||||||  |     
T  43968119 acttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttactcttttccacaacagag 43968020  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
    ||||||| | ||||||||||  | |||| ||||||| ||  ||||||||||||||||| ||||| ||  |||||| ||||||||||||| ||| ||||||    
T  43968019 gagtgacaaatccaaacgacatccttagataaatttcac--ctctttcacttaatttt-ttttaattcctttcatatttagaagttcttctgattctgat 43967923  T
Q  785 ttttt 789  Q
    |||||    
T  43967922 ttttt 43967918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 555 - 769
Target Start/End: Original strand, 29372340 - 29372554
Alignment:
Q  555 atgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataa 654  Q
    |||||||||||| |||  ||||||||||||||| ||||||| |||||||  |||| ||||  ||||||||||  ||||||||||||| ||||| ||||||    
T  29372340 atgctatcaaactacccacaatttgtataatcatttaatcagtcaatttggaaagttattcaattgaaagaatgacaacaatcatttatttttcgcataa 29372439  T
Q  655 accattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgt 754  Q
    ||||||| ||||||| ||| |||| | | | |||||||| |||||||||| || |||||||||||| || | | ||||||||||||||||||||||| ||    
T  29372440 accattcattttcccctttgccacgatgaaggagtgacaatccaaacgacaccattaggtaaatttcacatttgtttcacttaattttattttatttcgt 29372539  T
Q  755 ttcatgtttagaagt 769  Q
    |||||||||||||||    
T  29372540 ttcatgtttagaagt 29372554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 514 - 805
Target Start/End: Complemental strand, 43926445 - 43926155
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    |||||||||||||||||||||||||| |  | | ||||  ||| |||||||||||||   |||||||||||| ||||||||| ||||||| |||||||||    
T  43926445 ttttttctagactctagttctactttttgtatataaatcggatcctatcaaaccacccataatttgtataattacttaatcagtcaatttgaaaagctat 43926346  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||||||| ||| || ||| ||||||   | ||||||| | |||||||||| ||||||    
T  43926345 ttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgctttacccttttccacaatagaggagtgacaaatccaaacgacaccgtta 43926246  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
      ||||||| ||  ||||||| ||||||||| ||||| ||  |||||||||||||| ||||| ||| |||||||||||| ||||  ||||||||    
T  43926245 cataaatttcac--ctctttctcttaatttt-ttttaattcctttcatgtttagaacttcttctgattctgattttttagtgaaatttagctac 43926155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 517 - 805
Target Start/End: Original strand, 3471545 - 3471833
Alignment:
Q  517 tttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttc 616  Q
    |||||||| |||||||||  ||| |  ||| |||| |||| |||||||||||||   |||||||||||||||||||||| ||||||| ||||||||||||    
T  3471545 tttctagaatctagttctcatttttgtacataaatgtgattctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttc 3471644  T
Q  617 attgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgaca-ttccaaacgacgccgttaggt 714  Q
    |||||||||| |||||||||||||| ||| || |||| |||||||| |||| || ||| |||||||  | |||||| |  |||||||||| ||||||| |    
T  3471645 attgaaagaatcacaacaatcatttttttcttcgcatgaaccattcattttacccttttccacaacagaggagtgatagatccaaacgacaccgttagat 3471744  T
Q  715 aaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga--ttttttaatgaagcttagctac 805  Q
    |||||| ||  || |||||||||||||  ||||| ||  ||| |||||||||||||||| ||| |||||  ||||||||||||| ||||||||    
T  3471745 aaatttcac--ctatttcacttaattt--ttttaattcctttaatgtttagaagttcttatgattctgattttttttaatgaagtttagctac 3471833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 462 - 869
Target Start/End: Complemental strand, 30915465 - 30915052
Alignment:
Q  462 aaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttct---agactctagttctactttctagacaaaaatttgatgc 558  Q
    |||| |||||| || ||||| ||| ||||||||||||||||| || | |||||||||| |   |||||||| |||| |||||| |||| | || ||||||    
T  30915465 aaataaaaaaaatatatgttacttttttttctttcttcggtatacatttaagtttttttttttagactctaattctcctttctggacatagatctgatgc 30915366  T
Q  559 tatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcatt-gaaagaaccacaacaatcatttcttttttgcataaacc 657  Q
    || |||||| ||  |||| |||||||||||||||||| ||||||| |||||||||||||||  |||||| |||||||||||||||||||| |||||||      
T  30915365 taccaaacctcctccaatatgtataatcacttaatcagtcaatttgaaaagctatttcattaaaaagaatcacaacaatcatttctttttcgcataaata 30915266  T
Q  658 attcgttttcccttttcccacaacgtatgagtga-cattccaaacgacgccgttaggtaaattttacctctctttcacttaatt-tta--ttttattttg 753  Q
    ||| | ||||||  ||||||||||  |  | |||  | ||||||  || |||| ||| |||||| | ||||||||||||||||| |||  |||||||| |    
T  30915265 atttg-tttccccattcccacaacagagaaatgataaatccaaataacaccgtcaggaaaatttcaactctctttcacttaattattattttttatttcg 30915167  T
Q  754 tttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactggtgtctattttaaaaagaga 853  Q
    |||||| |||||| |||||| ||| | ||||||||||||||| |||| ||||         ||  |||||||||||| ||| ||||||||||||||||||    
T  30915166 tttcatttttagacgttcttctgattatgattttttaatgaaacttaactacataaaacaattatgtttttatttta-tggagtctattttaaaaagaga 30915068  T
Q  854 ttcgagcctcctattt 869  Q
      ||| ||||||||||    
T  30915067 gccgaacctcctattt 30915052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 477 - 805
Target Start/End: Complemental strand, 5869479 - 5869151
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaat 576  Q
    ||||| ||| ||||||||| ||| |||||||  | |||||||| |||||| ||||||| ||||||  ||| ||||| ||| |||||||||||||| ||||    
T  5869479 atgttacttatttttctttattcagtacacgattgagttttttttagactttagttctcctttctgtacataaatt-gatactatcaaaccacca-caat 5869382  T
Q  577 ttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttccc 676  Q
    || || ||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||||  |||||||||||| ||||||||  |||||    
T  5869381 ttttaaaatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttccgcataaaccatttgttttccc--ttccc 5869284  T
Q  677 acaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctc-tttcacttaa-----ttttattttattttgtttcatgtttagaagt 769  Q
    |||| | | ||||||| | | ||||||||  | |||| |||||||   ||||| ||||||||||     |||| ||||||||  ||||||||||||||||    
T  5869283 acaatgaaggagtgacaaattcaaacgac-actttagataaatttcttctctcttttcacttaattttttttttttttatttcatttcatgtttagaagt 5869185  T
Q  770 tcttgtgaatctga-ttttttaatgaagcttagctac 805  Q
    ||||   | ||||| ||||||||||||| ||||||||    
T  5869184 tctt---attctgatttttttaatgaagtttagctac 5869151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 454 - 789
Target Start/End: Original strand, 7857966 - 7858300
Alignment:
Q  454 ccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatt 552  Q
    |||||||||||| |||||  || |||||   || |||||||||||  |||||||| | |||||||| ||||||||||||||| |||| |  ||| ||||     
T  7857966 ccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgaacataaatc 7858065  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt-gca 651  Q
     ||| |||||||| ||||   |||||||||||||||||||||| |||||||  |||| || |||||| |||||| |||||||||||||| ||| || |||    
T  7858066 ggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaagttaattcatttaaagaatcacaacaatcatttttttcttcgca 7858165  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgacat-tccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    ||||||||||||||| || ||| |||||||  | |||||| |  |||||| ||| ||||||| ||||||| ||||||  ||||||| || || |||||||    
T  7858166 taaaccattcgttttacccttttccacaacagaggagtgaaaaatccaaatgacaccgttagataaatttcacctct--ttcactttatctt-ttttatt 7858262  T
Q  751 ttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
       |||||||||||||| ||||| ||| |||||||||||    
T  7858263 cc-tttcatgtttagaacttcttctgattctgatttttt 7858300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 487 - 792
Target Start/End: Original strand, 42777668 - 42777966
Alignment:
Q  487 tttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    ||||| ||| |||| ||||||| | | ||||||||||| |||| |||| ||||||| ||| |||| ||||| ||||||||||||  |||||||| ||||     
T  42777668 ttttttttttttcgatacacgtttgaattttttctagattctaattctcctttctatacataaatatgatgatatcaaaccacccccaatttgtgtaatt 42777767  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    | |        ||||||| |||||||||| ||| |||||| |||||||||||||| ||||  ||||| ||||||||||||| | |||||||||||| | |    
T  42777768 agt--------caatttagaaagctatttaattaaaagaatcacaacaatcattttttttccgcatataccattcgttttctcatttcccacaacggagg 42777859  T
Q  687 agtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatt 785  Q
    |||||| |  |||||| || |||||  |||||||| |||||||||||||||| |  | |||||||| ||||||||  ||||||||||  ||| ||| |||    
T  42777860 agtgacaaaaccaaaccacaccgttcagtaaatttcacctctctttcacttattaattttttatttcgtttcatgaatagaagttctattgattctaatt 42777959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 669 - 801
Target Start/End: Original strand, 35874996 - 35875128
Alignment:
Q  669 cttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaag 768  Q
    ||||||| || ||||| |||||||||| |||| |||  ||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||| |||    
T  35874996 cttttcctacgacgtaggagtgacatttcaaatgacatcgttaggtaaactccacctctcgttcacttaattttattttattttgtttcatgtttaaaag 35875095  T
Q  769 ttcttgtgaatctgattttttaatgaagcttag 801  Q
    ||||| ||| |||||||||||||||||||||||    
T  35875096 ttcttctgattctgattttttaatgaagcttag 35875128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 574 - 789
Target Start/End: Original strand, 1004060 - 1004272
Alignment:
Q  574 aatttgtataatcacttaatcaatcaattt-aaaaagctatttcattgaaagaaccacaacaatcatttctttt--ttgcataaaccattcgttttccct 670  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||||||||||| |||||||||||||| ||||  | |||||||||||||||||| ||     
T  1004060 aatttgtataatcacttaatcagtcaatttgaaaaaattatttcattgaaagaatcacaacaatcattttttttcatcgcataaaccattcgttttaccc 1004159  T
Q  671 tttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagtt 770  Q
    ||| |||||||  | ||||||||   |||||||| ||||||| ||||||| ||  ||||||||||||||||  ||||| ||  ||||||||||| || ||    
T  1004160 ttttccacaacagaggagtgaca--acaaacgacaccgttagataaatttcac--ctctttcacttaattt--ttttaattcctttcatgtttaaaactt 1004253  T
Q  771 cttgtgaatctgatttttt 789  Q
    ||| ||| |||||||||||    
T  1004254 cttctgattctgatttttt 1004272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 514 - 747
Target Start/End: Complemental strand, 44665168 - 44664935
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    |||||| |||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   ||||||||| |||||||||||| || ||||  |||| |||    
T  44665168 ttttttatagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtatcatcacttaatcagtctatttggaaagttat 44665069  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||| |||||||  | ||||||| | |||||||||  || |||    
T  44665068 ttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacgataccatta 44664969  T
Q  712 ggtaaattttacctctctttcacttaattttatttt 747  Q
    | ||||||| ||  || |||||||||||||| ||||    
T  44664968 gataaatttcac--ctttttcacttaattttttttt 44664935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 484 - 682
Target Start/End: Original strand, 33452705 - 33452901
Alignment:
Q  484 ttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtata 583  Q
    |||||||||||||||||||||  || | |||||||||||||||||| |||| |||| | |||| |||| | ||| ||||||||||||  |||||| ||||    
T  33452705 ttctttttctttcttcggtaccagtttgagttttttctagactctaattct-cttt-tggacataaatcttatggtatcaaaccacctccaatttatata 33452802  T
Q  584 atcacttaatcaatcaatttaaaaagctatttcattgaaa-gaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacg 682  Q
    |||||| ||| ||||||||| ||||| ||||| | | ||| ||| |||||||||||||||||||| ||||||| |||| | |||||| ||||||||||||    
T  33452803 atcactcaattaatcaatttgaaaagttattttaataaaaagaatcacaacaatcatttctttttcgcataaatcatttg-tttcccctttcccacaacg 33452901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 548 - 681
Target Start/End: Original strand, 27074550 - 27074684
Alignment:
Q  548 aaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-t 646  Q
    |||| |||| |||||||||||||   |||||||||||||||||||||| |||||||||||  |||||||||||||| || |||||||||||||| ||| |    
T  27074550 aaatctgatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaagtctatttcattgaaaaaatcacaacaatcatttttttct 27074649  T
Q  647 ttgcataaaccattcgttttcccttttcccacaac 681  Q
    | |||||||||||| ||||| |||||| |||||||    
T  27074650 tcgcataaaccatttgttttacctttttccacaac 27074684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 574 - 789
Target Start/End: Original strand, 18112118 - 18112341
Alignment:
Q  574 aatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt--tttgcataaaccattcgttttccctt 671  Q
    |||||||||||||||||||||| |||||||  ||| |||||| |||||||||| |||||||||||||| |||  || |||||||||||||||||| || |    
T  18112118 aatttgtataatcacttaatcagtcaatttggaaaactattttattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttaccct 18112217  T
Q  672 ttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcactta-------attttattttattttgtttcatgttt 763  Q
    || ||||||   | ||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||        |||| ||||| ||| ||||||||||    
T  18112218 tttccacaatagaggagtgacaaatccaaacgacaccgttagataaatttaac--ctctttcacttattattttttttttttttaatttctttcatgttt 18112315  T
Q  764 agaagttcttgtgaatctgatttttt 789  Q
    |||||||||| ||  |||||||||||    
T  18112316 agaagttcttatggttctgatttttt 18112341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 721 - 805
Target Start/End: Original strand, 33452908 - 33452992
Alignment:
Q  721 tacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||||||||| | | | |||||||||||||||| ||||||||    
T  33452908 tacctctatttcacttaatttttttttatttcgtttcatgtttagaagttcttctaattatgattttttaatgaagtttagctac 33452992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 574 - 674
Target Start/End: Complemental strand, 42951831 - 42951725
Alignment:
Q  574 aatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaa----ccacaacaatcatttcttt-tttgcataaaccattcgtttt-c 667  Q
    |||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||     |||||||||||||| ||| || |||||||||||||||||| |    
T  42951831 aatttgtataatcacttaatcagtcaatttgaaaagttattttattgaaagaatcacacacaacaatcatttttttcttcgcataaaccattcgttttac 42951732  T
Q  668 ccttttc 674  Q
    |||||||    
T  42951731 ccttttc 42951725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 446 - 539
Target Start/End: Original strand, 3445555 - 3445648
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctacttt 539  Q
    |||||||||||||||||||| |||||  || |||||   ||||||||||||||  |||||||| | | |||||| |||||||||||||| ||||    
T  3445555 atacccacccccacttaaataaaaaatatatatgttatatctttttctttctttagtacacgtttgaattttttttagactctagttctccttt 3445648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 654
Target Start/End: Complemental strand, 5971819 - 5971742
Alignment:
Q  573 caatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataa 654  Q
    |||||| ||| |||||||||||| |||||||||||||||||    || |||||| ||||||||||| |||| ||||||||||    
T  5971819 caatttctatcatcacttaatcagtcaatttaaaaagctat----tttaaagaatcacaacaatcagttctcttttgcataa 5971742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 725 - 805
Target Start/End: Complemental strand, 12268834 - 12268755
Alignment:
Q  725 tctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    |||||||| |||||| || |||||||| ||||||||||||| |||| || ||| | |||||||||||||||||||| ||||    
T  12268834 tctctttcgcttaatatt-ttttatttcgtttcatgtttagtagttattctgattatgattttttaatgaagcttatctac 12268755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 695 - 789
Target Start/End: Original strand, 3445660 - 3445751
Alignment:
Q  695 tccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |||||||||| ||||||| |||||||  |||||  | ||||||||||| ||| ||| | |||||||||||||||||||| ||| |||||||||||    
T  3445660 tccaaacgacaccgttagataaatttcgcctct--tccacttaattttttttaattct-tttcatgtttagaagttcttctgattctgatttttt 3445751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 659
Target Start/End: Complemental strand, 3575171 - 3575117
Alignment:
Q  605 aaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccat 659  Q
    |||||||||||||||||||||| |||   ||||||||| ||||||||||||||||    
T  3575171 aaaagctatttcattgaaagaatcacctaaatcatttcatttttgcataaaccat 3575117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 532
Target Start/End: Complemental strand, 41666120 - 41666040
Alignment:
Q  454 ccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataag--ttttttctagactctagtt 532  Q
    |||||||||||| |||||  || ||||| |||| | ||||||||||||||||||| | ||  |||||||||||||||||||    
T  41666120 ccccacttaaataaaaaatatatatgttacttcatcttctttcttcggtacacgtttgagttttttttctagactctagtt 41666040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 789
Target Start/End: Complemental strand, 42951723 - 42951643
Alignment:
Q  706 ccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    ||||||| ||||||| ||||||  ||||||||||||| ||||| ||  |||||||||| ||||||||| ||| |||||||||||    
T  42951723 ccgttagataaatttcacctct--ttcacttaatttt-ttttaattcctttcatgtttggaagttcttatgattctgatttttt 42951643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 872
Target Start/End: Original strand, 35875147 - 35875202
Alignment:
Q  817 gcgtttttattttactggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    |||||||||||||||| | |||||||||||||| |||  ||| |||||||||||||    
T  35875147 gcgtttttattttactcgagtctattttaaaaatagaaccgaacctcctatttcat 35875202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 838 - 871
Target Start/End: Original strand, 3445800 - 3445833
Alignment:
Q  838 ctattttaaaaagagattcgagcctcctatttca 871  Q
    |||||||||||||||| |||||||||||||||||    
T  3445800 ctattttaaaaagagagtcgagcctcctatttca 3445833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 838 - 871
Target Start/End: Original strand, 13585573 - 13585606
Alignment:
Q  838 ctattttaaaaagagattcgagcctcctatttca 871  Q
    |||||||||||||||| |||||||||||||||||    
T  13585573 ctattttaaaaagagagtcgagcctcctatttca 13585606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-99; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 467 - 805
Target Start/End: Complemental strand, 30915538 - 30915192
Alignment:
Q  467 aaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt---ctagactctagttctactttctagacaaaaatttgatgctatca 563  Q
    |||||| |||||||| | | |||||||||||| ||||| ||||| ||||||||   |||||||||||||||||||||| |||| ||||||||||||||||    
T  30915538 aaaaaaatacatgttacatatttttctttctttggtactcgtatgagtttttttttctagactctagttctactttctggacataaatttgatgctatca 30915439  T
Q  564 aaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-----tttgcataaacca 658  Q
    |||| ||||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||||||     || ||||||||||    
T  30915438 aacccccatcaatttgtataattacttaatcagtcaatttgaaaagctatttaattgaaagaatcacaacaatcatttctttaatttttcgcataaacca 30915339  T
Q  659 ttcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttca 758  Q
    ||| || |||| ||||  || |||||  ||||||||| |||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  30915338 ttcattatcccctttcttacgacgtagaagtgacatttcaaacgacaccgttatgtaaattttatctctctttcacttaattttattttattttgtttca 30915239  T
Q  759 tgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    |||||| |||||||| ||| |||||||||||||||||||||| ||||    
T  30915238 tgtttataagttcttctgattctgattttttaatgaagcttaactac 30915192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 450 - 805
Target Start/End: Complemental strand, 3748752 - 3748399
Alignment:
Q  450 ccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttct--agactctagttctactttctagacaa 547  Q
    |||||||||||||||||||||| ||||||||| |||  ||||   |||||  ||||  ||| |||||||| |  ||| |||||||||||||| | ||||     
T  3748752 ccacccccacttaaattaaaaa-ttacatgttactttctttt---tcttcaatacaaatatgagttttttttttagattctagttctactttttggacat 3748657  T
Q  548 aaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttt 647  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||| |    
T  3748656 aaatttgatgctatcaaaccgccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaattatttctttgt 3748557  T
Q  648 tgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatttt 747  Q
      ||||||| |||||||||||| ||||   | ||||| ||||||||||||||| ||| ||||||||||||||| || |||||||||||||||||||||||    
T  3748556 cacataaactattcgttttcccctttcatgcgacgtaggagtgacattccaaatgacaccgttaggtaaatttcacatctctttcacttaattttatttt 3748457  T
Q  748 attttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
     |||| |||||| |||| |||||||| ||| | ||| |||||||||||||||||||||    
T  3748456 gttttatttcatatttaaaagttcttctgattttgactttttaatgaagcttagctac 3748399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 596 - 805
Target Start/End: Original strand, 6294278 - 6294489
Alignment:
Q  596 atcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacatt 695  Q
    |||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||| |||||||| ||||| ||||||||||    
T  6294278 atcaatttgaaaagcaatttcattgaaagaatcacaacaatcatttctttttcgcataaactattcgttttcccctttcccacgacgtaggagtgacatt 6294377  T
Q  696 ccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga--ttttttaatg 793  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||  ||||||||||    
T  6294378 ccaaacgacaccgttaggtaaatttcacctctctttcacataattttattttattttgtttcatgtttagaagttcttttgattctgattttttttaatg 6294477  T
Q  794 aagcttagctac 805  Q
    ||||||||||||    
T  6294478 aagcttagctac 6294489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 512 - 872
Target Start/End: Complemental strand, 1093164 - 1092804
Alignment:
Q  512 agttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagct 611  Q
    ||||||||||||||| ||||||| || ||| |||| ||||||| | |||||||||||| | ||||| ||||||| ||| ||||| |||||||||||||||    
T  1093164 agttttttctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgactaaatcagtcaatttaaaaagct 1093065  T
Q  612 atttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtt 710  Q
    |||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||| |||| || |||||| | |||||| ||| |||||    
T  1093064 atttca-tgaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccaaaacggataagtgacaaatccaaatgacaccgtt 1092966  T
Q  711 aggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctacnnnnn 810  Q
    | ||||||| ||| |||||||||||||||||| || ||||| |||||||||||||||| |||| ||| ||| |||||||||| ||||||||||||         
T  1092965 a-gtaaattctacatctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttttgattctaattttttaataaagcttagctacataaa 1092867  T
Q  811 nnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
        |||||||||||||||| | |  | |||||||||| |||||  |||||||||||||||||    
T  1092866 aaaattgcgtttttattttattagaggcctattttaaatagagaaccgagcctcctatttcat 1092804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 502 - 872
Target Start/End: Complemental strand, 29308601 - 29308230
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||| ||| ||||| | || ||| |||| ||||||| | |||||||||||| | ||||| ||||||| ||||||||| |||||    
T  29308601 tacacgtttgagttttttctaaactttagtttttctatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaat 29308502  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtga-cattccaaa 700  Q
    || |||| |||||||||||||  || ||||||||||||||||||||  |||||| ||||||||||||| |||||||||| | || |||||  | || |||    
T  29308501 ttgaaaaactatttcattgaagtaatcacaacaatcatttctttttcacataaatcattcgttttcccctttcccacaatggataagtgataaatctaaa 29308402  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
     ||| |||||| ||||||| |||||||||||||||||||||| || ||||| |||||||||||||||| |||| ||| |||||||||||||| |||||||    
T  29308401 tgacaccgtta-gtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttatgattctgattttttaataaagctta 29308303  T
Q  801 gctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
     ||||         |||||||||||||||| | || | |||||||||| |||||  |||||||||||||||||    
T  29308302 actacacaaaaaaattgcgtttttattttattgggggcctattttaaatagagagccgagcctcctatttcat 29308230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 454 - 805
Target Start/End: Original strand, 350295 - 350651
Alignment:
Q  454 ccccacttaaat---taaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaa 550  Q
    ||||||||||||   ||||||| || ||||| ||||||||||||| | ||||||| || | | ||||||| |||| ||| |||| ||||   |||| |||    
T  350295 ccccacttaaataaataaaaaaatatatgttacttctttttctttttccggtacatgtttgaattttttccagacactaattctcctttg--gacataaa 350392  T
Q  551 tttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttc-attgaaagaaccacaacaatcatttcttttttg 649  Q
    | |||||||||||||||||||||||||| |||||||||| ||||| |||||||  ||||||||||| ||  |||||| |||||||||||||||||||| |    
T  350393 tatgatgctatcaaaccaccatcaatttatataatcactcaatcagtcaatttcgaaagctatttcaataaaaagaatcacaacaatcatttctttttcg 350492  T
Q  650 cataaaccattcgttttcccttttcccacaacgtatgagtga-cattccaaacgacgccgttaggtaaattttacc--tctctttcacttaattttattt 746  Q
    ||||||| ||| | |||||||||||||| |||| | || |||  | || ||||||| |||| |||||||||| |||  | ||||||| |||||||| |||    
T  350493 cataaacaatttg-tttcccttttcccataacggaggaatgataaatcaaaacgacaccgtcaggtaaatttcacctatatctttcatttaatttttttt 350591  T
Q  747 tattttgtttcatgtttagaagttc-ttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||| ||||||||||||||||||| || | | ||| |||||||||||||| ||||||||    
T  350592 tatttcgtttcatgtttagaagttctttctaattctaattttttaatgaagtttagctac 350651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 574 - 785
Target Start/End: Original strand, 21946109 - 21946317
Alignment:
Q  574 aatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttccctttt 673  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||  |||    
T  21946109 aatttgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaaccataacaattatttctttttcgcataaacaattcgttttcctcttt 21946208  T
Q  674 cccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    || || ||||| |||||||||| |||||||| ||||||||||||||  ||||||||||||||||| |||||||| ||||||||||| |||| ||||| ||    
T  21946209 cctac-acgtaagagtgacatt-caaacgacaccgttaggtaaattccacctctctttcacttaa-tttattttgttttgtttcatatttaaaagttatt 21946305  T
Q  774 gtgaatctgatt 785  Q
     ||| |||||||    
T  21946306 ctgattctgatt 21946317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 453 - 789
Target Start/End: Original strand, 2618236 - 2618570
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatt 552  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  |||||||| | ||||||||||||||| |||||||  ||| |  ||| ||||     
T  2618236 cccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttttttctagactttagttctcttttttgtacataaatc 2618335  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgca 651  Q
     ||| |||||||||||||   |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||| ||| || |||    
T  2618336 ggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaattatttttttcttcgca 2618435  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    ||||||||||||||| || ||| |||||||  | ||||||| | |||||||||| ||||| | ||||||| ||  ||||||||||||||||  ||||| |    
T  2618436 taaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacgacaccgttggataaatttcac--ctctttcacttaattt--ttttaat 2618531  T
Q  751 ttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |  ||||||||||| |||||||| | | |||||||||||    
T  2618532 tgctttcatgtttaaaagttcttcttattctgatttttt 2618570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 488 - 805
Target Start/End: Original strand, 57603 - 57917
Alignment:
Q  488 ttttctttcttcggtacacgtataagttttttct-agactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    ||||||||||||||||||||| | |||||||| | | ||||||||||| |||| |  ||| |||| |||| |||||||||||||   |||||||||||||    
T  57603 ttttctttcttcggtacacgtttgagtttttttttaaactctagttctcctttttgtacataaatctgatcctatcaaaccacccataatttgtataatc 57702  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtat 685  Q
    ||||||||| |||||||| |||||||||||||| |||||| |||||||||||||| ||| || |||||||||||||||||| || ||| ||||||   |     
T  57703 acttaatcagtcaatttagaaagctatttcattcaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaatagag 57802  T
Q  686 gagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgat 784  Q
    ||||||| | |||||||||| ||||||| ||||||| ||  ||||||||||||||||  ||||| ||  |||||| ||||||||||||| |||   |  |    
T  57803 gagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaattt--ttttaattcctttcatatttagaagttcttttgatatt--t 57896  T
Q  785 tttttaatgaagcttagctac 805  Q
    |||||||||||| ||||||||    
T  57897 tttttaatgaagtttagctac 57917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 453 - 789
Target Start/End: Original strand, 6360641 - 6360975
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatt 552  Q
    ||||||||||||| |||||  || |||||   || |||||||||||  |||||||| | |||||||||||||||||||||||  ||| |  ||| ||||     
T  6360641 cccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttttttctagactctagttctcttttttgcacataaatc 6360740  T
Q  553 tgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgca 651  Q
     ||| ||||||||||||| | |||||||||||||||||||||| ||||||| ||||| || ||||||||||||| |||||||||||||| ||| || | |    
T  6360741 ggatcctatcaaaccacccttaatttgtataatcacttaatcagtcaatttgaaaagtta-ttcattgaaagaatcacaacaatcatttttttcttcgta 6360839  T
Q  652 taaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttatt 750  Q
    ||||||||||||||| || ||| |||||||  | ||||||| | | |||||||| ||||||| |||||||  | |||||||||||| ||||| ||||| |    
T  6360840 taaaccattcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccgttagataaattt--catctctttcactt-atttttttttaat 6360936  T
Q  751 ttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |  |||||||||||||||||||| ||| | |||||||||    
T  6360937 tcctttcatgtttagaagttcttttgattttgatttttt 6360975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 487 - 801
Target Start/End: Original strand, 19231528 - 19231854
Alignment:
Q  487 tttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    ||||| ||||||| | |||||| | ||||||||||||| | |||||||||||||| |||| |||| || ||||||||||| ||| |||||||||||| ||    
T  19231528 tttttttttcttcaggacacgtttgagttttttctagagtttagttctactttctggacataaatctggtgctatcaaactaccttcaatttgtata-tc 19231626  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    ||||||||||||||||| |||||||||  |||||||| || |||||||||||||||||||| | |||||| |||| |||||  ||||||||||| | |      
T  19231627 acttaatcaatcaatttgaaaagctatgacattgaaaaaatcacaacaatcatttctttttcgtataaactattctttttcaattttcccacaatggaga 19231726  T
Q  687 agtga-cattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattt---------tattttgtttcatgtttagaag---ttctt 773  Q
    |||||  | ||||||| |  |  |||||||||||| ||||||||||||||||||||| |||         |||| |||||||||||||||||   |||||    
T  19231727 agtgataaatccaaacaatactcttaggtaaatttcacctctctttcacttaattttttttttttttttatattctgtttcatgtttagaagttcttctt 19231826  T
Q  774 gtgaatctgattttttaatgaagcttag 801  Q
     ||| ||| |||||||||||||||||||    
T  19231827 ctgattcttattttttaatgaagcttag 19231854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 453 - 789
Target Start/End: Complemental strand, 3515035 - 3514698
Alignment:
Q  453 cccccacttaaattaaaaaat-tacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaa 550  Q
    ||||||||||||| ||||||| || |||||   || |||||||||||  |||||||| | |||||||| ||| ||||||||||| |||| |  ||| |||    
T  3515035 cccccacttaaataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctaaactctagttctcctttttgtacataaa 3514936  T
Q  551 tttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttg 649  Q
    |  ||| |||||||||||||   ||||||||||||||| |||||| |||||||  |||||||| |||||||||||| |||||||||||||| ||| || |    
T  3514935 tcagatcctatcaaaccacccctaatttgtataatcacgtaatcattcaatttggaaagctatatcattgaaagaatcacaacaatcatttttttcttcg 3514836  T
Q  650 cataaaccattcgttttcccttttcccacaacgtatgagtg-acattccaaacgacgccgttaggtaaattttacctctctttcacttaattttatttta 748  Q
    ||||||||||||||||| || ||| |||||||  | ||||| | | |||||||||| || |||| ||||||| ||  ||||||||||||||||| |||||    
T  3514835 cataaaccattcgttttacccttttccacaacagaggagtgaaaaatccaaacgacaccattagataaatttcac--ctctttcacttaatttt-tttta 3514739  T
Q  749 ttttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
     ||  ||||||||||| |||||||| ||| |||||||||||    
T  3514738 attcctttcatgtttaaaagttcttctgattctgatttttt 3514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 501 - 773
Target Start/End: Complemental strand, 12614851 - 12614582
Alignment:
Q  501 gtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaa 600  Q
    |||||||| | |||||||| |||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   |||||||||||||||||||||| ||||    
T  12614851 gtacacgtttgagttttttttagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaa 12614752  T
Q  601 tttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attcca 698  Q
    ||| |||||||||||||||||||||| |||||||||||||| ||| || ||||||||||| |||||| || ||| |||||||  | |||| || | | ||    
T  12614751 tttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatccgttttacccttttccacaacagaggagtaacaaattca 12614652  T
Q  699 aacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    |||||  ||||||| ||||||| ||  ||||||||||||||||| ||||| ||  ||||||||||||||||||||    
T  12614651 aacga--ccgttagataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttctt 12614582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 516 - 675
Target Start/End: Complemental strand, 628215 - 628055
Alignment:
Q  516 ttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctattt 615  Q
    ||||||||||||||||||  |||| |  ||| ||||  |||  ||||||||||||   |||||||||||||||||||||| ||||||| |||||||||||    
T  628215 ttttctagactctagttcacctttttgtacacaaatcagatcttatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctattt 628116  T
Q  616 cattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcc 675  Q
    ||||||||||| |||||||||||||| ||| || |||||||||||||||||||||||||||    
T  628115 cattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttcccttttcc 628055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 454 - 742
Target Start/End: Original strand, 6754088 - 6754376
Alignment:
Q  454 ccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaattt 553  Q
    |||||||||||| |||||  || |||||   || |||||||||||  |||| ||| | ||||||||||||| |||||||||  ||| |  ||| ||||      
T  6754088 ccccacttaaataaaaaatatatatgttatatcattttctttctttagtacgcgtttgagttttttctagattctagttctcttttttgtacataaatcg 6754187  T
Q  554 gatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcat 652  Q
    ||| ||||||||||| |   |||||||||| ||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||| ||| || ||||    
T  6754188 gatcctatcaaaccatccctaatttgtatagtcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcat 6754287  T
Q  653 aaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaatttt 742  Q
    |||||||||||||| || ||| |||||||  | ||||||| | |||||| ||| |||||   ||||||| ||  |||||||||||||||||    
T  6754288 aaaccattcgttttacccttttccacaacagaggagtgacaaatccaaatgacaccgttgaataaatttcac--ctctttcacttaatttt 6754376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 514 - 727
Target Start/End: Original strand, 29149345 - 29149560
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||||||||||| |||| |  ||| ||||  ||| ||||||||||||    |||||||||||||||||||||| |||||||  |||| ||     
T  29149345 ttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataatcacttaatcagtcaatttggaaagttag 29149444  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||| |||||||  | ||||||| | |||||||||  ||||||    
T  29149445 ttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacgataccgtta 29149544  T
Q  712 ggtaaattttacctct 727  Q
     |||||||| ||||||    
T  29149545 cgtaaatttcacctct 29149560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 502 - 647
Target Start/End: Complemental strand, 1690767 - 1690622
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||| | | ||||||| || | | |||| |||| || | |||||||||||||| |||||||||||||||||| ||||||||||    
T  1690767 tacacgtttgagttttttctaaattttagttctcctatttggacataaatctggtactatcaaaccaccaccaatttgtataatcacttgatcaatcaat 1690668  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttt 647  Q
    || ||||  |||||||||||||||| ||||||||||||||||||||    
T  1690667 ttgaaaatttatttcattgaaagaatcacaacaatcatttcttttt 1690622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 477 - 672
Target Start/End: Original strand, 11088461 - 11088647
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaat 576  Q
    ||||| ||||||||||||| |||||||||||| | |||||||||||||||||| |||| |||  | |||| |||| |||||||| |||||||||  ||||    
T  11088461 atgttacttctttttcttttttcggtacacgtttgagttttttctagactctaattctcctt--tggacataaatctgatgctaccaaaccacccccaat 11088558  T
Q  577 ttgtataatcacttaatcaatcaatttaaaaagctatttc-attgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttt 672  Q
    || ||        |||||| ||||||| |||||||||||| ||  |||||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  11088559 ttata--------taatcagtcaatttgaaaagctatttcaataaaaagaatcacaacaatcatttcttttttgcataaaccatttgtttccccttt 11088647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 486 - 789
Target Start/End: Complemental strand, 7525317 - 7525015
Alignment:
Q  486 ctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataa 584  Q
    |||||| ||||||  |||||||| | |||||||| ||||||||||||||| | || |  ||| ||||  ||| |||||||||||||   |||||||||||    
T  7525317 ctttttttttctttagtacacgtttgagtttttttctagactctagttctccattttgtacataaatcggatcctatcaaaccacccataatttgtataa 7525218  T
Q  585 tcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgt 683  Q
    ||||||||||| |||||||  |||| ||||| |||||||||| |||||||||||||| ||| || |||||||| |||  |||| || ||| |||||||      
T  7525217 tcacttaatcagtcaatttggaaagttattttattgaaagaatcacaacaatcatttttttcttcgcataaacaatttattttacccttttccacaacag 7525118  T
Q  684 atgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctg 782  Q
    | ||||||| | |||||| ||| ||||||| ||||||| ||  || |||||||||||||| ||||| ||  |||||||||||||| || || | | ||||    
T  7525117 aggagtgacaaatccaaa-gacaccgttagataaatttcac--ctatttcacttaatttt-ttttaattcctttcatgtttagaactttttcttattctg 7525022  T
Q  783 atttttt 789  Q
    |||||||    
T  7525021 atttttt 7525015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 446 - 591
Target Start/End: Original strand, 7341089 - 7341228
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    ||||||||| |||||||||||||||||||| ||||| ||| |||      |||| |||||| ||| |||||||||||||||||||||| ||||||| |||    
T  7341089 atacccaccaccacttaaattaaaaaattatatgttactttttt------cttcagtacacatatgagttttttctagactctagttccactttctggac 7341182  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcactta 591  Q
    | |||||||||| ||| |||||||| |||||||| |||||||||||    
T  7341183 ataaatttgatgttattaaaccaccgtcaatttgaataatcactta 7341228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 467 - 579
Target Start/End: Original strand, 6294175 - 6294286
Alignment:
Q  467 aaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaac 566  Q
    ||||||||| ||||| |||||||| ||||||| |||||| |||| |||||||||||||||||||||||||||| | | || |||||||||||||||||||    
T  6294175 aaaaaattaaatgttacttcttttactttctt-ggtacatgtatgagttttttctagactctagttctactttttgggcataaatttgatgctatcaaac 6294273  T
Q  567 caccatcaatttg 579  Q
    || ||||||||||    
T  6294274 catcatcaatttg 6294286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 708 - 805
Target Start/End: Original strand, 11088706 - 11088804
Alignment:
Q  708 gttaggtaaattttacctctctttcacttaatt-ttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||||||||| ||||||||||||||||||| || |||||||| ||||||||||||||||||||| | | |||||||||||||||||| ||||||||    
T  11088706 gttaggtaaatttcacctctctttcacttaattctttttttatttcgtttcatgtttagaagttcttctaattctgattttttaatgaagtttagctac 11088804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 502 - 773
Target Start/End: Original strand, 31860933 - 31861186
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | || |||||||||||| ||||||| || ||| |||| |||| || |  ||||||||||||  ||||||||||||| ||||||||| |||||    
T  31860933 tacacgtttgaggtttttctagactttagttcttctatctggacataaatctggta-tatcaaaccaccc-caatttgtataattacttaatcagtcaat 31861030  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||||||||||| ||||||||||               |||||||||||||| || |||||||||||| || |||||| | | ||||    
T  31861031 ttgaaaagctatttcattgaaagaatcacaacaatc---------------aaaccattcgtttttccctttcccacaacggataagtgacaaattcaaa 31861115  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    | ||| ||||| ||||||| || ||||||||||||||||||| || ||||| |||| ||||||||||| ||||    
T  31861116 caacgtcgtta-gtaaattctatctctctttcacttaatttt-ttgtatttcgttttatgtttagaagctctt 31861186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 521 - 617
Target Start/End: Original strand, 31234862 - 31234956
Alignment:
Q  521 tagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttca 617  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||| |  ||||||||||||||||||||||||||||||| |||||||||||||    
T  31234862 tagactctagttctactttttagacaagaattcaatgctatcaaaccatc--caatttgtataatcacttaatcaatcaatttgaaaagctatttca 31234956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 675
Target Start/End: Original strand, 29401013 - 29401245
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt-ctagactctagttctactttctaga 544  Q
    ||||||||| |||||||||| |||||  || ||||    || |||||||||||  |||||||| | |||||||| || |||||||||| |  ||| |  |    
T  29401013 atacccacctccacttaaataaaaaatatatatgtcatatcattttctttctttagtacacgtttgagtttttttcttgactctagttttcatttttgta 29401112  T
Q  545 caaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctt 644  Q
    || ||||   || ||||||||| |||   |||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||| ||    
T  29401113 cataaatcgaatcctatcaaactacccctaattagtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttt 29401212  T
Q  645 t-tttgcataaaccattcgt-tttcccttttcc 675  Q
    | || ||||||||||||||| || |||||||||    
T  29401213 tcttcgcataaaccattcgtcttacccttttcc 29401245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 467 - 641
Target Start/End: Complemental strand, 14893585 - 14893412
Alignment:
Q  467 aaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaac 566  Q
    ||||||||| ||||| ||   |||||||||||| ||||| || | |||||||| ||   |||| |||| ||||||||| | |||| ||||||||||||||    
T  14893585 aaaaaattatatgttactaagttttctttcttcagtacatgtttgagttttttgtact-tctaattctcctttctagatataaatctgatgctatcaaac 14893487  T
Q  567 caccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcattt 641  Q
     ||  | |||||||||||| ||||||||| ||||||| |||| ||||||| || |||||| ||||||||||||||    
T  14893486 aactctgaatttgtataattacttaatcagtcaatttgaaaaactatttcgttaaaagaatcacaacaatcattt 14893412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 521 - 617
Target Start/End: Original strand, 31243999 - 31244092
Alignment:
Q  521 tagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttca 617  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||| |  |||||||||||||||||||||||||||| || |||||||||||||    
T  31243999 tagactctagttctactttttagacaagaattcaatgctatcaaaccatc--caatttgtataatcacttaatcaatcaa-ttgaaaagctatttca 31244092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 580 - 872
Target Start/End: Original strand, 22503751 - 22504045
Alignment:
Q  580 tataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccac 678  Q
    |||||||||||||||| ||||||| |||| ||||||| |||||||||  | ||||||||||| ||| || | ||||||||||| |||| || ||| ||||    
T  22503751 tataatcacttaatcagtcaatttgaaaaactatttcgttgaaagaattaaaacaatcatttttttcttcgtataaaccattcattttacccttttccac 22503850  T
Q  679 aacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtga 777  Q
    |||  |  |||||| | | |||| ||| ||||||| ||||||| |||||   ||||||||||||| ||| | ||  ||| |||||||||| ||||| |||    
T  22503851 aacagagaagtgacaaattcaaatgacaccgttagataaatttcacctc---ttcacttaattttttttaaattccttttatgtttagaacttcttctga 22503947  T
Q  778 atctg---attttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactg-gtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
     ||||    ||||||||||||  ||||||||         || || ||||||||||||| | ||||||||||||||||||  |||||||||||||||||    
T  22503948 ttctgttttttttttaatgaaatttagctacacaaaaaaattacg-ttttattttactgagggtctattttaaaaagagaaccgagcctcctatttcat 22504045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 729 - 872
Target Start/End: Complemental strand, 1690624 - 1690480
Alignment:
Q  729 tttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctacnnnnnnnnnttgcgtttttattt 828  Q
    ||||||||||| || || ||||| |||||||||||||||| | || ||| ||||||||||| || ||| ||||||||         |||| |||||||||    
T  1690624 tttcacttaatatttttgtatttcgtttcatgtttagaagcttttctgattctgatttttttataaagtttagctacacaaaaaaattgcatttttattt 1690525  T
Q  829 tactgg-tgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    || |||  | |||||||||| |||||  |||||||||||||||||    
T  1690524 tattggaggcctattttaaatagagagccgagcctcctatttcat 1690480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 617
Target Start/End: Original strand, 1327594 - 1327638
Alignment:
Q  573 caatttgtataatcacttaatcaatcaatttaaaaagctatttca 617  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||    
T  1327594 caatttgtataatcacttaatcaatcaatttagaaaactatttca 1327638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 568 - 615
Target Start/End: Original strand, 32056056 - 32056103
Alignment:
Q  568 accatcaatttgtataatcacttaatcaatcaatttaaaaagctattt 615  Q
    |||||| | ||||||||||||||||||| |||||||||||||||||||    
T  32056056 accatccaattgtataatcacttaatcactcaatttaaaaagctattt 32056103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 557
Target Start/End: Original strand, 21945934 - 21946034
Alignment:
Q  454 ccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaattt 553  Q
    |||||||||||||||||||||||||||   | |||||  ||||||| | ||||||||  |||||| ||| ||||||||||||  || | |||| ||||||    
T  21945934 ccccacttaaattaaaaaattacatgt---tacttttgttttcttcaggacacgtatgtgtttttcctaaactctagttctatatttttgacataaattt 21946030  T
Q  554 gatg 557  Q
    ||||    
T  21946031 gatg 21946034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 368 - 429
Target Start/End: Original strand, 6294091 - 6294152
Alignment:
Q  368 gggccggatcttggggagcgcaaggagctcaattaaattgggcctctaaaaactatgggcct 429  Q
    |||||||| ||||| ||||||||||| |||||  ||   |||||||||||||||||||||||    
T  6294091 gggccggaccttggagagcgcaaggatctcaaccaagccgggcctctaaaaactatgggcct 6294152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 838 - 871
Target Start/End: Original strand, 29401406 - 29401439
Alignment:
Q  838 ctattttaaaaagagattcgagcctcctatttca 871  Q
    |||||||||||||||| |||||||||||||||||    
T  29401406 ctattttaaaaagagagtcgagcctcctatttca 29401439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 2e-97; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 446 - 872
Target Start/End: Original strand, 17325727 - 17326146
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||||||| ||||||||||||||||||||| |||||      |||| ||| ||| |   |||||| |||||||| ||||||||||||| ||||||| |||    
T  17325727 atacccactcccacttaaattaaaaaattatatgtt------tttttttttttcag---acgtatgagttttttttagactctagttccactttctggac 17325817  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaattt-aaaaagctatttcattgaaagaaccacaacaatcatttctt 644  Q
    | |||||||||||||| |||| |||||| ||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||| |||||||    
T  17325818 ataaatttgatgctattaaactaccatcgatttgaataatcacttaatcagtcaatttgaaaaaactatttcattgaaagaatcacaacaattatttctt 17325917  T
Q  645 ttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttat 744  Q
    ||| |||||||||||||| |||||| ||||| || ||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||    
T  17325918 tttcgcataaaccattcgctttcccctttcctacgacgtaggagtgacattccaaacgacaccgttaggtaaatttcacctatctttcactttattttat 17326017  T
Q  745 tttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac-nnnnnnnnnttgcgtttttattttactggtgtctattt 843  Q
    ||| ||||||||| |||||| |||||||| ||| |||||||||||||||||  ||||||||          ||||||||| |||||||||| | ||||||    
T  17326018 tttgttttgtttcgtgtttaaaagttcttctgattctgattttttaatgaattttagctacacaaaaagaattgcgttttgattttactggagcctattt 17326117  T
Q  844 taaaaagagattcgagcctcctatttcat 872  Q
    |||||| |||  |||||||| ||||||||    
T  17326118 taaaaatagaaccgagcctcatatttcat 17326146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 446 - 791
Target Start/End: Original strand, 10033425 - 10033770
Alignment:
Q  446 atacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagac 545  Q
    |||||||||||||||||||||||||||| || ||||     ||||| ||||||| | |||| ||| ||||||| ||||||||||||||||||||||  ||    
T  10033425 atacccacccccacttaaattaaaaaatcacttgtta----tttttttttcttcaggacacatatgagttttt-ctagactctagttctactttctgtac 10033519  T
Q  546 aaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaa-tcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctt 644  Q
    | |||||||||||||||||||| ||||||||||||||||||||| | | || ||||||| ||||||||||| |||||||||| ||||| ||| |||||||    
T  10033520 ataaatttgatgctatcaaacccccatcaatttgtataatcactgattaaagtcaatttgaaaagctattttattgaaagaatcacaataattatttctt 10033619  T
Q  645 ttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttat 744  Q
    ||| |||||||||||||||||||||||| || || ||||| ||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  10033620 tttcgcataaaccattcgttttcccttt-cctacgacgtaggagtgacattccaaacgaaaccgttaggtaaatttcacctctctttcacttaattttat 10033718  T
Q  745 ttta-----ttttgtttcatgtttagaagttcttgtgaatctgattttttaa 791  Q
    ||||     |||||||||||||||| |||||||| ||| |||||||||||||    
T  10033719 tttattttgttttgtttcatgtttaaaagttcttctgattctgattttttaa 10033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 470 - 805
Target Start/End: Original strand, 138043 - 138377
Alignment:
Q  470 aaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccac 569  Q
    |||||||||||| ||| |||||||| |||| | |||||||| ||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||    
T  138043 aaattacatgttacttttttttctt-cttctggacacgtatgagttttttctagactctagttctacttttcggacataaatttgatgctatcaaaccac 138141  T
Q  570 catcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttccc 669  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || ||||||||| |||| ||||  |||||||||||||||||||||    
T  138142 catcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaataatcacaacaattattttttttccgcataaaccattcgttttccc 138241  T
Q  670 ttttcccacaacgtatgagtgacattccaaacg-acgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaag 768  Q
     ||| | || | |||  |||||||||||||  | |  |||||| |||||||| |||||||||||||||||||||||||| ||||||||| |||||| |||    
T  138242 cttt-ctacgaagtagtagtgacattccaagtgaaaaccgttaagtaaatttcacctctctttcacttaattttattttgttttgtttcctgtttaaaag 138340  T
Q  769 ttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||| ||| | |||||| |||||||| |||||||||    
T  138341 ttcttttgattttgatttcttaatgaaacttagctac 138377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 502 - 805
Target Start/End: Original strand, 43511548 - 43511851
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||||| || ||| |||| |||| || | |||||||||||||  ||||||||||||||||||||||| |||||    
T  43511548 tacacgtttgagttttttctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaat 43511647  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||| ||||||| ||||||||||||||||||||   |||||||||||||||| || |||||||||||| || |||||| | ||||||    
T  43511648 ttgaaaagctatttcatggaaagaatcacaacaatcatttctttttcatataaaccattcgtttttccctttcccacaacggataagtgacaaatccaaa 43511747  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    |||| |||||| ||||||| |||||||||||||||||||||| || ||||| |||||||||||||||| |||  ||| |||||||||||||| |||||||    
T  43511748 cgacaccgtta-gtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctctgctgattctgattttttaataaagctta 43511846  T
Q  801 gctac 805  Q
    |||||    
T  43511847 gctac 43511851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 528 - 805
Target Start/End: Original strand, 18873409 - 18873693
Alignment:
Q  528 tagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatt----tgtataatcacttaatcaatcaatttaaaaagctatttcattgaaa 623  Q
    ||||| ||||||||  ||| ||||||||||||||||||||||||||||||    ||||||| ||||||||||  |||||| |||||||||||||||||||    
T  18873409 tagttttactttctgaacataaatttgatgctatcaaaccaccatcaattaatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaa 18873508  T
Q  624 gaaccacaacaatcatttcttttttgcataaaccatt---cgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattt 720  Q
    ||| ||||||||| |||||||||| ||||||||||||   ||||||||| ||||| || ||||| ||||||||||||||||||  |||||||||||||||    
T  18873509 gaatcacaacaattatttctttttcgcataaaccattattcgttttcccctttcctacgacgtaggagtgacattccaaacgaaaccgttaggtaaattt 18873608  T
Q  721 tacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
     |||| |||||||||||| |||||||| |||||||||||||||| ||||| || ||| ||| |||||||||||||| ||| ||||    
T  18873609 cacctttctttcacttaactttattttgttttgtttcatgtttaaaagtttttctgattctaattttttaatgaagtttaactac 18873693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 477 - 805
Target Start/End: Original strand, 27351254 - 27351582
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaat 576  Q
    ||||| |||| |||||||||||| ||| |||| | || |||||||||||||||||||| ||||||  ||| ||||||| |||||||||||||||  ||||    
T  27351254 atgttacttccttttctttcttcagtatacgtttgagatttttctagactctagttctcctttctgaacataaatttggtgctatcaaaccacctccaat 27351353  T
Q  577 ttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttccc 676  Q
    |||||||| |||||||||| |||||||  |||| ||||||||||||||||  ||   ||||||||||||||||||||||||| || |||||   ||||||    
T  27351354 ttgtataaccacttaatcagtcaatttggaaagttatttcattgaaagaataacctaaatcatttcttttttgcataaaccagtcattttcttctttccc 27351453  T
Q  677 acaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgt 775  Q
    |||||| | ||||||| | || ||||||| |  |||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||| |    
T  27351454 acaacggaggagtgacaaatctaaacgacactattaggtaaatttcacctctctttcacttaatttt-ttttatttcctttcatgtttagaagttcttct 27351552  T
Q  776 gaatctgattttttaatgaagcttagctac 805  Q
    || ||  |||||||||||||| ||||||||    
T  27351553 gattcgaattttttaatgaagtttagctac 27351582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 502 - 872
Target Start/End: Complemental strand, 3349862 - 3349492
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||||| || ||| |||| ||||||| | | |||||||||| | ||||| | ||||| ||||||||| |||||    
T  3349862 tacacgtttgagttttttctagactttagttctcctatctggacataaatttggtac-atcaaaccactaccaattggaataatgacttaatcagtcaat 3349764  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || |||||||||||||| ||||||| ||||||||||||||||||||  |||||||| ||||||||||| |||||||||||| || |||||| | ||||||    
T  3349763 ttgaaaagctatttcatagaaagaatcacaacaatcatttctttttcacataaaccgttcgttttcccctttcccacaacggataagtgacaaatccaaa 3349664  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
      || |||||| ||||||| ||||||||||||||| || ||| || ||||| |||||||||||||||  |||| ||| |||||||||||||| |||||||    
T  3349663 tcacaccgtta-gtaaattatacctctctttcactcaagttttttgtatttagtttcatgtttagaaactcttctgattctgattttttaataaagctta 3349565  T
Q  801 gctacnnnnnnnnnttgcgtttttattttactggtg-tctattttaaaaagagattcgagcctcctatttcat 872  Q
    |||||         |||||||||||||||| ||| |  |||||||||| |||||  |||||||||||||||||    
T  3349564 gctacacaaaaaaattgcgtttttattttattggagacctattttaaatagagagccgagcctcctatttcat 3349492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 502 - 872
Target Start/End: Complemental strand, 10591407 - 10591038
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||||| || |||  ||| |||| || | |||||||||||||  ||||||||||||||||||||||| | |||    
T  10591407 tacacgtttgagttttttctagactttagttctcctatctgaacataaatatggtactatcaaaccacccccaatttgtataatcacttaatcagttaat 10591308  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtga-cattccaaa 700  Q
    || ||||| |||||||||||||||| |||||||||||||| |||||  || ||| |||||||| |||| |||||||||||| || ||| | || ||||||    
T  10591307 ttgaaaagttatttcattgaaagaatcacaacaatcatttatttttcacaaaaatcattcgttatcccctttcccacaacggataagtaatcaatccaaa 10591208  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    || | |||||| ||||||| |||||||||||||||||||||| || ||||| |||||||||||||||  | || ||| |||||||||||||| |||||||    
T  10591207 cggcaccgtta-gtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaaactattctgattctgattttttaataaagctta 10591109  T
Q  801 gctacnnnnnnnnnttgcgtttttattttactggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
     ||||         ||||||||||| |||| ||| |||||||||||| |||||  |||||||||||||||||    
T  10591108 actacacaaaaaaattgcgttttta-tttattggcgtctattttaaatagagagccgagcctcctatttcat 10591038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 502 - 805
Target Start/End: Original strand, 29156120 - 29156423
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | ||||||||||||||| ||||| | || |||  ||| |||| || | |||||||||||||   |||||||||||||||||||||| |||||    
T  29156120 tacacgtttgagttttttctagactatagttatcctatctgaacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcagtcaat 29156219  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||| |||||||||||| || |||||| | | ||||    
T  29156220 ttaaaaagttatttcattgaaagaatcacaacaatcatttctttttcatataaaccattcgttttcccctttcccacaacggataagtgacaaattcaaa 29156319  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    |||  |||||| ||||||| ||||||||||||| |||||||| || |||||||||||||||||||||| |||  ||| | |||||||||||| ||| |||    
T  29156320 cgataccgtta-gtaaattctacctctctttcaattaatttttttgtattttgtttcatgtttagaagctctactgattttgattttttaataaagttta 29156418  T
Q  801 gctac 805  Q
    |||||    
T  29156419 gctac 29156423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 576 - 805
Target Start/End: Complemental strand, 7390460 - 7390232
Alignment:
Q  576 tttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcc 675  Q
    |||||||||||||||||||| ||||||||||||| |||||||| ||||||| ||| ||||| |||||||||| ||||||||||||||||||||| |||||    
T  7390460 tttgtataatcacttaatcagtcaatttaaaaagttatttcatcgaaagaatcacgacaattatttctttttcgcataaaccattcgttttcccctttcc 7390361  T
Q  676 cacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgt 775  Q
      | || ||  |||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||||||| ||||||| |||||||| |    
T  7390360 tgcgacatagaagtgacattc-aaacgacaccgttagataaatttcacctctctttcacttaattttattttgttttgttttatgtttaaaagttcttct 7390262  T
Q  776 gaatctgattttttaatgaagcttagctac 805  Q
    || || ||||||||||||||||||||||||    
T  7390261 gattccgattttttaatgaagcttagctac 7390232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 502 - 868
Target Start/End: Complemental strand, 17514070 - 17513703
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | || |||||||||||| ||||||| || ||| || | |||| || | ||| |||||||||  ||||||||||||||||||||||| |||||    
T  17514070 tacacgtttgaggtttttctagactttagttctcctatctggatataaatctggtactaacaaaccacccccaatttgtataatcacttaatcagtcaat 17513971  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    || ||||| ||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||| || |||||||||||| || |||||| | ||||||    
T  17513970 ttgaaaagttatttcactgaaagaatcacaacaatcatttctttttcacataaaccattcgtttttccctttcccacaacggataagtgacaaatccaaa 17513871  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    ||| | |||| |||||||| |||||||||||||||||||||| || ||||| |||||||||||||||| |||| ||| |||  ||||||||| |||||||    
T  17513870 cgaggtcgtt-ggtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctatttttttaataaagctta 17513772  T
Q  801 gctacnnnnnnnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatt 868  Q
     ||||         |||| ||||||||||| | || | ||||| |||| ||||| ||||||||||||||    
T  17513771 actacacaaaataattgcatttttattttattgggggcctattataaatagagagtcgagcctcctatt 17513703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 442 - 872
Target Start/End: Original strand, 16515398 - 16515806
Alignment:
Q  442 tatgatacccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttct 541  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||||||||    | |||||||||| || ||||| || ||| ||||||||||||||    
T  16515398 tatgatacctacccccacttaaattaaaaaattacatgttacttttttttctt----cagtacacgtatgagctttttttaaactttagttctactttct 16515493  T
Q  542 agacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcattt 641  Q
    ||||| |||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||| ||||  ||||| |||||||||| ||||||||| ||||    
T  16515494 agacataaatttgatgctattaaaacaccatcaattttaataatcacttaatcaatcaatttgaaaaattattttattgaaagaatcacaacaattattt 16515593  T
Q  642 cttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgacattccaaacgacgccgttaggtaaattttacctctctttcacttaattt 741  Q
    |||                  ||||||||||| | || | ||| ||||||||||||||| ||| || |||| ||||||| |||||| |||||||||||||    
T  16515594 ctt------------------ttttccctttt-ctacgatgtaggagtgacattccaaatgacaccattagctaaatttcacctctttttcacttaattt 16515674  T
Q  742 tattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac-nnnnnnnnnttgcgtttttattttactggtgtcta 840  Q
    |||||| |||||||||||||||  |||||||| | | ||||| ||||| |||||||||||||||           ||||||||||||||||| | | |||    
T  16515675 tattttgttttgtttcatgttttaaagttcttctcattctgactttttcatgaagcttagctacacacaaaaaaatgcgtttttattttactcgggccta 16515774  T
Q  841 ttttaaaaagagattcgagcctcctatttcat 872  Q
    ||||||||| |||  ||| |||||||||||||    
T  16515775 ttttaaaaatagaaccgaacctcctatttcat 16515806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 514 - 805
Target Start/End: Original strand, 20975927 - 20976218
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||| |||||||  | ||| |||| ||||||| | |||||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||    
T  20975927 ttttttctagactttagttctcttatcttgacataaatttggtactatcaaaccaccaccaatttgtataatcatttaatcagtcaatttgaaaagctat 20976026  T
Q  614 ttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttag 712  Q
    ||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||   |||||||||||| || |||||| | |||||| ||| ||||||     
T  20976027 ttcattgaaagaatcacaacaatcatttctttttcacataaactattcgttttcgtctttcccacaacggataagtgacaaatccaaatgacaccgtta- 20976125  T
Q  713 gtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||| |||||||||||||||||||||| || ||||| |||  ||||||| ||| |||| ||| | |||||||||||| |||| |||||||    
T  20976126 gtaaattctacctctctttcacttaatttttttgtatttggttcaatgtttaaaagctcttctgattatgattttttaataaagcatagctac 20976218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 514 - 872
Target Start/End: Complemental strand, 42292003 - 42291643
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||| ||| ||||||| || ||| |||| ||||||| | |||||||| ||||| ||||||||||||||||||||||| ||||||| |||| ||||    
T  42292003 ttttttctaaactttagttctcctatctggacataaatttggtactatcaaatcaccaccaatttgtataatcacttaatcagtcaatttgaaaatctat 42291904  T
Q  614 ttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttag 712  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||  || || |||||| | |||||| | |  |||| |    
T  42291903 ttcattgaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccaccgcggataagtgacaaatccaaatgtcatcgtt-g 42291805  T
Q  713 gtaaattttacctctctttcacttaattttattt--tattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctacnnnnn 810  Q
    ||||||| |||||||||||||||||||||| |||  ||||| |||||||||||||||| |||| ||| ||||||||||| || ||| ||| ||||         
T  42291804 gtaaattctacctctctttcacttaatttttttttgtatttcgtttcatgtttagaagctcttctgattctgatttttttataaagtttaactacacaaa 42291705  T
Q  811 nnnnttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
        |||||||||||||||| | || | ||| |||||| |||||  |||||||||||||||||    
T  42291704 aaaattgcgtttttattttattggggggcta-tttaaatagagagccgagcctcctatttcat 42291643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 512 - 773
Target Start/End: Complemental strand, 4734706 - 4734444
Alignment:
Q  512 agttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagct 611  Q
    ||||||||||||||| ||||||| || ||| |||| |||| || | |||||||||||||| |||||||||||||| ||| |||| ||||||| |||| ||    
T  4734706 agttttttctagactttagttctcctatctggacataaatctggtactatcaaaccaccaccaatttgtataatcccttgatcactcaatttgaaaatct 4734607  T
Q  612 atttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtt 710  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||| || || |||||| | |||||| ||| |||||    
T  4734606 atttcattgaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccatttcccacagcggataagtgacaaatccaaatgacaccgtt 4734507  T
Q  711 aggtaaattttacctctctttcacttaattttattt-tattttgtttcatgtttagaagttctt 773  Q
    | ||||||| ||| |||||||||||||||||| ||| ||||| |||||||||||||||| ||||    
T  4734506 a-gtaaattctacatctctttcacttaattttttttgtatttcgtttcatgtttagaagctctt 4734444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 575 - 872
Target Start/End: Original strand, 33281677 - 33281974
Alignment:
Q  575 atttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttc 674  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||||| | ||| |||||||||||||| |||||||||||| | ||| |||||||    
T  33281677 atttgtataatcacttaattagtcaatttaaaaagttatttcattgaaagaatcccaataatcatttctttttcgcataaaccatttgcttttccttttc 33281776  T
Q  675 ccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    |||||||| ||||||||| | | ||||||||  ||||| |||||||| ||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  33281777 ccacaacggatgagtgacaaattcaaacgacatcgttaagtaaatttcacctctctttcactt-atttttttatattttgtttcatgtttagaagttctt 33281875  T
Q  774 gtgaatctgattttttaatgaagcttagctacnnnnnnnnnttgcgtttttattttactggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
     ||| | |||| ||||||||||| ||| ||||         |||||||||||||||||||    |||||||||||||||| || | |||| ||||||||    
T  33281876 ttgattatgatcttttaatgaagtttaactacacaaaaagattgcgtttttattttactgagacctattttaaaaagagagtcaaacctcatatttcat 33281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 477 - 733
Target Start/End: Original strand, 40956223 - 40956475
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaat 576  Q
    ||||| |||||||||||||||||     |||| | ||||||||||||||||||||||| |||| | |||| |||| |||||| |||||||   |  ||||    
T  40956223 atgttacttctttttctttcttc-----acgtttgagttttttctagactctagttctcctttgtggacataaatctgatgcaatcaaacattctccaat 40956317  T
Q  577 ttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttccc 676  Q
    ||||||||||||||||||| | ||||| |||| |||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  40956318 ttgtataatcacttaatcatttaatttgaaaaactatttcattaaaagaatcacaacaatcatttcttttttgcatacaccattcgttttcccctttccc 40956417  T
Q  677 acaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttca 733  Q
    |||| | | ||||||| | |||||||||||||||||| ||||||| ||||||||||||    
T  40956418 acaatggaagagtgacaaatccaaacgacgccgttagataaatttcacctctctttca 40956475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 502 - 805
Target Start/End: Original strand, 5829315 - 5829614
Alignment:
Q  502 tacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaat 601  Q
    ||||||| | |||||||| |||||| ||||||| || ||| |||| |||| || | ||||||||||| | |||||||||||||||||||||||| |||||    
T  5829315 tacacgtttgagttttttatagactttagttctcctatcttgacataaatctggtactatcaaaccaacctcaatttgtataatcacttaatcagtcaat 5829414  T
Q  602 ttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaa 700  Q
    ||  |||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||||||| || ||||| |||||| ||  ||||| | ||||||    
T  5829415 tt--aaagctatttcattaaaagaatcacaacaatcatttctttttcacataaaccattcgtttttccctttcctacaacggataggtgacaaatccaaa 5829512  T
Q  701 cgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagctta 800  Q
    |||| | |||| ||||| | |||||||||||||||||||||| || |||||  ||  ||||||||||| |||| ||| |||||||||||||| ||| |||    
T  5829513 cgacactgtta-gtaaactctacctctctttcacttaatttttttgtatttcatt--atgtttagaagctcttctgattctgattttttaataaagttta 5829609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 453 - 789
Target Start/End: Complemental strand, 26377959 - 26377622
Alignment:
Q  453 cccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagtttttt--ctagactctagttctactttctagacaaaaa 550  Q
    ||||||||||||| |||||  || |||||   | ||||||||||||  |||||||| | ||||||||  ||||||||||||||| |||| |  ||| |||    
T  26377959 cccccacttaaataaaaaatatatatgttatatttttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaa 26377860  T
Q  551 tttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt--ttt 648  Q
    |  ||| |||||||||||||   |||||||||||||||||| ||| ||||| | | |||||||||||||||||||| |||||||||||||| |||  ||     
T  26377859 tcagatcctatcaaaccacccctaatttgtataatcacttattcagtcaatgtgagaagctatttcattgaaagaatcacaacaatcatttttttccttc 26377760  T
Q  649 gcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttatttt 747  Q
    |||||||||||||||||| ||||||  ||||||  | ||||||| | |||||||||| ||||||| |||||||  | ||||||||||||||| |  ||||    
T  26377759 gcataaaccattcgttttaccttttttcacaactgaggagtgacaaatccaaacgacaccgttagataaattt--catctctttcacttaatat--tttt 26377664  T
Q  748 attttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||  |||||||||||||| ||||| ||| |||||||||||    
T  26377663 aattcctttcatgtttagaacttcttctgattctgatttttt 26377622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 514 - 804
Target Start/End: Complemental strand, 19099436 - 19099145
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    |||||| |||||| ||||||| |||| |  ||| |||| |||| ||||||||||| |   |||||||||||||||||||||| |||||||||||||||||    
T  19099436 ttttttttagactatagttctcctttttgtacataaatctgatcctatcaaaccatccctaatttgtataatcacttaatcagtcaatttaaaaagctat 19099337  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||||| ||| || ||||||||||||||||||  |  || |||||||  |  |||||| | |||||||||| ||||||    
T  19099336 ttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttatcactttccacaaccgagaagtgacaaatccaaacgacaccgtta 19099237  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga--ttttttaatgaagcttagcta 804  Q
    | ||||||| ||  ||||||||||||||||| | ||| ||  |||||||||||||||||||| ||| |||||  ||||| ||||||| |||||||    
T  19099236 gataaatttcac--ctctttcacttaatttt-tcttaattcttttcatgtttagaagttcttctgattctgaattttttcaatgaagtttagcta 19099145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 574 - 789
Target Start/End: Original strand, 13423866 - 13424081
Alignment:
Q  574 aatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttt 672  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||    
T  13423866 aatttgtataatcacttaatcaatcaatttagaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccctt 13423965  T
Q  673 tcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttc 771  Q
    | ||||||   | ||||||| | || ||||||| ||||| | ||||||| ||  ||||||||||||||||| ||||| ||  ||||||||||| ||||||    
T  13423966 ttccacaatagaggagtgacaaatctaaacgacaccgttcgataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttaaaagttc 13424063  T
Q  772 ttgtgaatctgatttttt 789  Q
    || ||| |||||||||||    
T  13424064 ttctgattctgatttttt 13424081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 514 - 789
Target Start/End: Original strand, 13474572 - 13474846
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||| |||||||||||  ||| |  ||| ||||  ||| |||||||||||||   |||||||||||||||||||||| ||||||| ||||| | |    
T  13474572 ttttttctaaactctagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagttgt 13474671  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||| |||||||  | ||||||| | |||||||||| ||||||    
T  13474672 ttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacgacaccgtta 13474771  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||||||||||  ||||||||||||||||| || || ||  |||||| ||||||| ||||| | | |||||||||||    
T  13474772 gataaattttac--ctctttcacttaatttt-ttgtaattcctttcatttttagaacttcttcttattctgatttttt 13474846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 512 - 773
Target Start/End: Original strand, 40779132 - 40779391
Alignment:
Q  512 agttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagct 611  Q
    ||||||||||||| ||||||||| ||||||  ||| |||||||||| |||||||| | |  ||||||||||||||  ||||| | ||||||| |||| ||    
T  40779132 agttttttctagagtctagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatcgtttaataagtcaatttgaaaaact 40779231  T
Q  612 atttcattgaaagaaccacaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgt 709  Q
    ||| ||||| | ||| ||||||||||||||||||||| | ||||||||||||||||||  |||||||||| | | ||||||| | || |||||||  | |    
T  40779232 attccattg-aggaatcacaacaatcatttcttttttcgtataaaccattcgttttcc--tttcccacaatggaggagtgacaaatcgaaacgacatcat 40779328  T
Q  710 taggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttctt 773  Q
    ||||||||||| ||||||||||||||||||||| ||||||||  ||||||||||| || |||||    
T  40779329 taggtaaatttcacctctctttcacttaatttt-ttttatttcatttcatgtttaaaatttctt 40779391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 450 - 773
Target Start/End: Original strand, 13656085 - 13656410
Alignment:
Q  450 ccacccccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaa 549  Q
    ||||| |||||||||| |||||  || |||||   || |||||||||||  |||||||| | ||||||||||||||||||||||| |||| |  ||| ||    
T  13656085 ccacctccacttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttttttctagactctagttctcctttttgtacataa 13656184  T
Q  550 atttgatgctatcaaaccaccatc---aatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt- 645  Q
    ||  ||| |||  |||  ||||||   |||||||||||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||| |||     
T  13656185 atcggatcctaaaaaaaaaccatccctaatttgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttc 13656284  T
Q  646 tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttat 744  Q
    || |||||||||||||||||| || ||| | |||||  | ||||| | | | |||||||| ||||||| ||||||| ||  |||||| |||||||||| |    
T  13656285 ttcgcataaaccattcgttttacccttttctacaacagaggagtgtcaaattcaaacgacaccgttagataaatttcac--ctcttttacttaatttt-t 13656381  T
Q  745 tttattttgtttcatgtttagaagttctt 773  Q
    |||| ||  |||||||||||||| |||||    
T  13656382 tttaattcctttcatgtttagaacttctt 13656410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 558 - 789
Target Start/End: Original strand, 12661295 - 12661524
Alignment:
Q  558 ctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaac 656  Q
    |||||||||||||   ||||||||||||||||||| || |||||||  ||||||||||||||||||||| |||||||||  ||| ||| || ||||||||    
T  12661295 ctatcaaaccacctctaatttgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaatcacaacaatattttttttcttcgcataaac 12661394  T
Q  657 cattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtt 755  Q
    |||||||||| || ||| |||||||  | ||||||| | |||||||||| | ||||| ||||||| ||   |||||||||||||||  ||||| ||  ||    
T  12661395 cattcgttttacccttttccacaacagaggagtgacaaatccaaacgacactgttagataaatttcac--atctttcacttaattt--ttttaattcctt 12661490  T
Q  756 tcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |||||||||||||||||| ||| |||||||||||    
T  12661491 tcatgtttagaagttcttctgattctgatttttt 12661524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 628 - 797
Target Start/End: Complemental strand, 8379450 - 8379282
Alignment:
Q  628 cacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctc 726  Q
    ||||||||| |||||||||| |||||| ||||||||||||||  ||||||||||| ||||||||| | |||||||||| |||||  |||||||| |||||    
T  8379450 cacaacaataatttctttttcgcataatccattcgttttccc-cttcccacaacggatgagtgacaaatccaaacgacaccgttgcgtaaatttcacctc 8379352  T
Q  727 tctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagc 797  Q
    ||||||||||||| || |||| ||| |||||||||||||||| |||| |||  || |||||||||||||||    
T  8379351 tctttcacttaatatt-ttttttttcgtttcatgtttagaagatcttctgatacttattttttaatgaagc 8379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 518 - 872
Target Start/End: Original strand, 931326 - 931670
Alignment:
Q  518 ttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttca 617  Q
    ||||||||| |||||||  |||||| | | |||||||||||||| ||| |||   ||||||||||||||||||||||| |||||||| ||||||     |    
T  931326 ttctagactatagttctcttttctatatataaatttgatgctattaaatcacacccaatttgtataatcacttaatcagtcaatttagaaagct-----a 931420  T
Q  618 ttgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtg-acattccaaacgacgccgttaggtaa 716  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||||||| | |||||||||||  | ||||| | | ||||||||||          |     
T  931421 ttgaaagaatcacaataatcatttctttttcgcataaaccattcgttttctcctttcccacaacagacgagtgaagagtccaaacgac---------aac 931511  T
Q  717 attttacctctctttcactta--attttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctacnnnnnnnnn 814  Q
    |||| ||||||||||||||||  ||||| ||| |||| |||||||||||||||||| || | | |||||||||  |||| | ||||| |||             
T  931512 atttcacctctctttcacttaatattttttttaatttcgtttcatgtttagaagtttttctaattctgattttccaatgcaacttagttacacaaaaaac 931611  T
Q  815 ttgcgtttttattttact-ggtgtctattttaaaaagagattcgagcctcctatttcat 872  Q
    |||| ||||| ||||||| |  ||||||||||||||||||  ||| |||||||||||||    
T  931612 ttgcatttttgttttactagaggtctattttaaaaagagagccgaacctcctatttcat 931670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 477 - 805
Target Start/End: Original strand, 23069125 - 23069457
Alignment:
Q  477 atgttgcttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaat 576  Q
    ||||| |||||||||||||||||| ||||||| |  ||||||| || |||||| |||| ||||||  ||| |||| |||||||| |||||||||  ||||    
T  23069125 atgttacttctttttctttcttcgttacacgtttgtgttttttttatactctaattctcctttctgaacataaatatgatgctagcaaaccacccccaat 23069224  T
Q  577 ttgtataatcacttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttccctttt--- 673  Q
    |||||||||| |||||||| || ||||  ||||||||||||||         |||| ||||||||| |||||||  ||| |||||||||| || |||       
T  23069225 ttgtataatcccttaatcattcgatttggaaagctatttcatt---------acaagaatcatttcgtttttgctcaaaacattcgtttttccctttccc 23069315  T
Q  674 ----------cccacaacgtatgagtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtt 762  Q
              ||||||| | | ||||||| | | |||||||| ||||||||||||||| || | ||||||| |||||||| |||||||  ||||||| ||    
T  23069316 acaatggaggcccacaatggaggagtgacaaattcaaacgacaccgttaggtaaatttcacatttctttcatttaatttt-ttttattacgtttcatatt 23069414  T
Q  763 tagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||||||| | | | |||||||||||||||||||||||||    
T  23069415 tagaagttcttctaattttgattttttaatgaagcttagctac 23069457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 615 - 805
Target Start/End: Original strand, 26312027 - 26312221
Alignment:
Q  615 tcattgaaagaaccacaacaatcatttctttttt-gcataaaccattcgtttt-cccttttcccacaacgtat---gagtgacat-tccaaacgacgccg 708  Q
    |||||||||||| |||||||||||||| ||| || | |||||||||||||||| ||| ||| |||||||  ||   ||||||||  |||||||||| |||    
T  26312027 tcattgaaagaatcacaacaatcatttttttcttcgtataaaccattcgttttaccccttttccacaacagatcaggagtgacaaatccaaacgacaccg 26312126  T
Q  709 ttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga-ttttttaatgaagcttagctac 805  Q
    |||| ||||||| ||||||  ||||||||||||| ||||| ||  |||||||||||||| ||||| ||| ||||| ||||||||||||  ||||||||    
T  26312127 ttagataaatttcacctct--ttcacttaatttt-ttttaattcctttcatgtttagaacttcttctgattctgatttttttaatgaaatttagctac 26312221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 619
Target Start/End: Complemental strand, 8379673 - 8379538
Alignment:
Q  484 ttctttttctttcttcggtacacgtataagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtata 583  Q
    ||||||||||||||||||||||| | | |||||||||||||||||  ||||  ||| | |||| |||| ||||| ||||||| ||||   ||||||||||    
T  8379673 ttctttttctttcttcggtacacatttgagttttttctagactctcattctcatttatggacataaatatgatgttatcaaatcacccctaatttgtata 8379574  T
Q  584 atcacttaatcaatcaatttaaaaagctatttcatt 619  Q
    || ||||||||||| |||||  |||| |||||||||    
T  8379573 attacttaatcaattaatttcgaaagttatttcatt 8379538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 514 - 666
Target Start/End: Complemental strand, 36718689 - 36718535
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||||||||||| |||| |  |||  |||  ||| |||||||||||||   |||||||||||||| ||||||| |||||||  |||| |||    
T  36718689 ttttttctagactctagttctcctttttgtacatgaatcggatcctatcaaaccacccctaatttgtataatcatttaatcagtcaatttgtaaagttat 36718590  T
Q  614 ttcattgaaagaaccacaacaatcatttcttt--tttgcataaaccattcgtttt 666  Q
    || |||||||||| |||||| || |||| |||  || ||||||||||||||||||    
T  36718589 tttattgaaagaatcacaaccataattttttttcttcgcataaaccattcgtttt 36718535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 729 - 805
Target Start/End: Original strand, 4177358 - 4177433
Alignment:
Q  729 tttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| ||||    
T  4177358 tttcgcttaatttt-ttttattttgtttcatgtttagaagttcttctgattatgattttttaatgaagcttaactac 4177433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 573 - 617
Target Start/End: Complemental strand, 37029095 - 37029051
Alignment:
Q  573 caatttgtataatcacttaatcaatcaatttaaaaagctatttca 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37029095 caatttgtataatcacttaatcaatcaatttaaaaagctatttca 37029051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 722 - 805
Target Start/End: Original strand, 17462993 - 17463078
Alignment:
Q  722 acctctctttcacttaattttatt--ttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||||||| ||||||||| ||  |||||| ||||||||||||||||||||| | | |||  ||||||||||||||||| ||||    
T  17462993 acctctctttcgcttaatttttttatttatttcgtttcatgtttagaagttcttctaattctagttttttaatgaagcttaactac 17463078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 744 - 805
Target Start/End: Original strand, 13288615 - 13288676
Alignment:
Q  744 ttttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||||||||||||||||| | |||||| ||| | ||||||||||||||| |||||||||    
T  13288615 ttttattttgtttcatgtttaaatgttcttctgattatgattttttaatgaaacttagctac 13288676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 695 - 789
Target Start/End: Original strand, 37046906 - 37046997
Alignment:
Q  695 tccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    |||||||||| ||||||| ||||||| ||||||  |||| |||||||| ||||| ||| |||||||||||||| ||||| | | |||||||||||    
T  37046906 tccaaacgacaccgttagataaatttcacctct--ttcatttaatttt-ttttaatttctttcatgtttagaacttcttctaattctgatttttt 37046997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 595
Target Start/End: Original strand, 26311948 - 26312029
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatca 595  Q
    ||||||||||| ||||||||| |||| |  ||| ||||  ||| |||||||||||||   ||||||||||||||||||||||    
T  26311948 ttttttctagattctagttcttctttttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaatca 26312029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 615
Target Start/End: Complemental strand, 524961 - 524870
Alignment:
Q  521 tagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctattt 615  Q
    |||||||||||||| |||| | || || ||||  ||||| ||||||||   || | || ||||||||||||||||||||||||||||| ||||||    
T  524961 tagactctagttctcctttttggaaaagaattcaatgctctcaaacca---tctaattttataatcacttaatcaatcaatttaaaaaactattt 524870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 456 - 532
Target Start/End: Original strand, 12661187 - 12661263
Alignment:
Q  456 ccacttaaattaaaaaattacatgttgcttctttttctttcttcggtacacgtataagttttttctagactctagtt 532  Q
    |||||||||| |||||  || |||||  ||| |||||||||||  |||||||| | |||||||||||||||||||||    
T  12661187 ccacttaaataaaaaatatatatgttatttcattttctttctttagtacacgtttgagttttttctagactctagtt 12661263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 755 - 805
Target Start/End: Original strand, 16061081 - 16061131
Alignment:
Q  755 ttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac 805  Q
    ||||||||||||| || || ||| |||||||||||||||||||||| ||||    
T  16061081 ttcatgtttagaattttttctgattctgattttttaatgaagcttaactac 16061131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 838 - 871
Target Start/End: Original strand, 13474898 - 13474931
Alignment:
Q  838 ctattttaaaaagagattcgagcctcctatttca 871  Q
    |||||||||||||||| |||||||||||||||||    
T  13474898 ctattttaaaaagagagtcgagcctcctatttca 13474931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 838 - 871
Target Start/End: Complemental strand, 26377572 - 26377539
Alignment:
Q  838 ctattttaaaaagagattcgagcctcctatttca 871  Q
    |||||||||||||||| |||||||||||||||||    
T  26377572 ctattttaaaaagagagtcgagcctcctatttca 26377539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 514 - 789
Target Start/End: Original strand, 16652 - 16926
Alignment:
Q  514 ttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctat 613  Q
    ||||||||||||||||||||| |||| |  ||| ||||  ||| |||||||||||||   |||||||||||||||||||||| ||||||| |||||||||    
T  16652 ttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctat 16751  T
Q  614 ttcattgaaagaaccacaacaatcat-ttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtta 711  Q
    ||||||||||||| |||||| ||||| || || || |||||||||||||||||| || ||| |||||||  | |||| || | |||||||||| ||||||    
T  16752 ttcattgaaagaatcacaacgatcatatttttcttcgcataaaccattcgttttacccttttccacaacagaggagtaacaaatccaaacgacaccgtta 16851  T
Q  712 ggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | ||||||| ||  ||||||||||||||||| ||||| ||  |||||||||||||| ||||| ||| ||| |||||||    
T  16852 gataaatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaacttcttctgattctaatttttt 16926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 595 - 789
Target Start/End: Original strand, 1084 - 1278
Alignment:
Q  595 aatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttt-tttgcataaaccattcgttttcccttttcccacaacgtatgagtgac- 692  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| || ||| ||||||| || |||||||     
T  1084 aatcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacataggagtgaca 1183  T
Q  693 attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatttttt 789  Q
    | |||||||||| ||||||| ||||||| ||  |||||||| |||||||| ||||| ||  |||||||||||||| ||||| ||| |||||||||||    
T  1184 aatccaaacgacaccgttagataaatttcac--ctctttcatttaatttttttttaattcctttcatgtttagaacttcttctgattctgatttttt 1278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 513 - 805
Target Start/End: Complemental strand, 17255 - 16963
Alignment:
Q  513 gttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagcta 612  Q
    ||||||||||||||||||||||  ||| |  | | ||||  ||| |||||||| ||||   |||||||||||||||||||||| |||||||  |||||||    
T  17255 gttttttctagactctagttctcatttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaagcta 17156  T
Q  613 tttcattgaaagaaccacaacaatca-tttcttttttgcataaaccattcgttttcccttttcccacaacgtatgagtgac-attccaaacgacgccgtt 710  Q
    |||| ||||||||| ||||||||||| |||||| || |||||||||||||||||| || ||| |||||||  |  |||||| | | |||||||| |||||    
T  17155 tttcgttgaaagaatcacaacaatcattttcttcttcgcataaaccattcgttttaccattttccacaacaaagaagtgacaaattcaaacgacaccgtt 17056  T
Q  711 aggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattt--tttaatgaagcttagctac 805  Q
     | ||||||| ||  ||||||||||||||||  ||||| ||  |||||||||||||| |||||  || ||||||||  |||||||||  ||||||||    
T  17055 ggataaatttcac--ctctttcacttaattt--ttttaattcctttcatgtttagaacttcttcagattctgattttatttaatgaaatttagctac 16963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 591 - 789
Target Start/End: Complemental strand, 22850 - 22653
Alignment:
Q  591 aatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttctttttt-gcataaaccattcgttttcccttttcccacaacgtatgagt 689  Q
    |||| |||||| | |||| ||||||||||||||||| ||||| ||| |||| ||| || |||||||||||||||||| || ||| ||||||| || ||||    
T  22850 aatcgatcaatatgaaaaactatttcattgaaagaatcacaataattatttttttcttcgcataaaccattcgttttacccttttccacaacataggagt 22751  T
Q  690 gacat-tccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttt 788  Q
    ||||  | |||||||| ||||||| ||||||| ||||||  ||||||||||||| ||||| ||  |||||||||||||||||||| ||| ||||||||||    
T  22750 gacaaattcaaacgacaccgttagataaatttcacctct--ttcacttaatttt-ttttaattcctttcatgtttagaagttcttctgattctgattttt 22654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 488 - 805
Target Start/End: Complemental strand, 46322 - 46005
Alignment:
Q  488 ttttctttcttcggtacacgtat-aagttttttctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatc 586  Q
    |||| |||||||||||||| | | || |||||||||||||||||||||  ||| || ||| | || |||| |||||||||||||   |||||| ||||||    
T  46322 ttttatttcttcggtacacatttgaatttttttctagactctagttctcatttttatacatatatctgatcctatcaaaccacccataatttggataatc 46223  T
Q  587 acttaatcaatcaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacaacgtatg 686  Q
    ||||||||| |||||||  ||  |||||||||||||| || |||||||||||||| || ||  ||||||||||||||||| |  |||  ||||| | | |    
T  46222 acttaatcagtcaatttggaagtctatttcattgaaataatcacaacaatcattttttcttcacataaaccattcgttttactctttttcacaaag-agg 46124  T
Q  687 agtgac-attccaaacgacgccgttaggtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctga-- 783  Q
    |||||| | |||||||||| ||||| | ||||||| ||  || |||||||||||||| ||||| ||  |||||| ||||||  |||||  || |||||      
T  46123 agtgacaaatccaaacgacaccgttggctaaatttcac--ctgtttcacttaatttttttttaattcctttcatatttaga--ttcttaagattctgatt 46028  T
Q  784 -ttttttaatgaagcttagctac 805  Q
     ||||||||||||| ||||||||    
T  46027 tttttttaatgaagtttagctac 46005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 520 - 693
Target Start/End: Complemental strand, 8511 - 8336
Alignment:
Q  520 ctagactctagttctactttctagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttaaaaagctatttcatt 619  Q
    ||||||||||| | | |||||| |||| |||  | ||||||||||||||||   |||||||||||||| ||||||| |||||||  ||| ||||||||||    
T  8511 ctagactctagatttcctttctggacataaaccttatgctatcaaaccacccataatttgtataatcaattaatcagtcaatttcgaaaactatttcatt 8412  T
Q  620 gaaagaaccacaacaatcatttctttttt--gcataaaccattcgttttcccttttcccacaacgtatgagtgaca 693  Q
    ||||||| ||||| ||| |||| ||||||   || |||||||||||||||||  ||||| ||||| | ||||||||    
T  8411 gaaagaatcacaaaaattattttttttttccacacaaaccattcgttttcccccttcccgcaacggaggagtgaca 8336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 739 - 872
Target Start/End: Original strand, 99083 - 99219
Alignment:
Q  739 ttttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagcttagctac--nnnnnnnnnttgcgtttttattttactg-gt 835  Q
    |||| ||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||  |||||||           |||| |||||||||||||| |     
T  99083 ttttttttaatttcgtttcatgtttagaagttcttctgattctgattttttaatgaaggctagctacaaaaaaaaaaattgcatttttattttactgagg 99182  T
Q  836 gtctattttaaaaagagattcgagcctcctatttcat 872  Q
    | |||||||||||||||||| ||||||||||||||||    
T  99183 gcctattttaaaaagagatttgagcctcctatttcat 99219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University