View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12880_low_6 (Length: 261)
Name: NF12880_low_6
Description: NF12880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12880_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 10393254 - 10393489
Alignment:
| Q |
16 |
gtgtgaaccgccgggaacatgaatctaggtttaaaaaatagtgaatgaacctgatcaccaacatggaaacagatccacacacctacaactcactagatcg |
115 |
Q |
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| T |
10393254 |
gtgtgaaccgccgggagcacgaatctaggtttaaaaaatagtgaatgaacctgatcaccaacatggaaatatatccacacacctacaactcactagatcg |
10393353 |
T |
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| Q |
116 |
aaagatgacgcggataagataacaatgcacaacaaatcagcacggtggaaacacactagtgacaaatgaggaaacacaaccgtttgaaccaattccaaat |
215 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
10393354 |
aaagatgacgcagataagataacaatgcacaacaaatcagcacggtggaaacacactactgacaaatgaggaaacacaaccgtttgaaccaattccaaat |
10393453 |
T |
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| Q |
216 |
ccacctacacggtggagacaaccaaaaacagtgaac |
251 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
10393454 |
ccacctacacggtggagacaaccaaaaacagtgaac |
10393489 |
T |
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