View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12881_high_15 (Length: 418)
Name: NF12881_high_15
Description: NF12881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12881_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 18 - 408
Target Start/End: Complemental strand, 34068335 - 34067945
Alignment:
| Q |
18 |
atgatttacatgcaaataatattgcttattattattgttgttgttctattcagttggtaggtttttgtctgaaatcatggtctagagcaaagcaatatag |
117 |
Q |
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| T |
34068335 |
atgatttacatgcaaataatattgcttattattattgttgttgttctattcagttggtaggtttttgtctgaaatcatggtctagagcaaagcaatatag |
34068236 |
T |
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| Q |
118 |
aatgaatgctgatgaatgatatatgtctattcattattacacgcaacaacaaattgaagaagaatttcacatgtcaaacgaggtctaagaaagaggaaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34068235 |
aatgaatgctgatgaatgatatatgtctattcattattacacgcaacaacaaattgaagaagaatttcacatgtcaaacgaggtctaagaaagaggaaat |
34068136 |
T |
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| Q |
218 |
tgaattgtgtttatgtatgttttccttgttgatgattgtaatgctatatatagaggaatgaaagacaagcagacaacaagctaacccatgacgaaacaac |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
34068135 |
tgaattgtgtttatgtatgttttccttgttgatgattgtaatgctatatatagaggaatgaaagacaagcaggcaacaagctaacccatgacgaaacaac |
34068036 |
T |
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| Q |
318 |
cctcttgaaaactacattcttagatcttctagaatacacgacattgatatgcatgaccctttaacttttcgtataagatccacaacctttg |
408 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34068035 |
cctcttgaaaactacattcttagatcttctagaatacacgacattgatatgcatgaccctttaacttttcgtataagatccacaacctttg |
34067945 |
T |
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