View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12881_low_28 (Length: 306)
Name: NF12881_low_28
Description: NF12881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12881_low_28 |
 | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 10663733 - 10663454
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
10663733 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagatctttgctatcccaagttgtggaagtgacagattcaag |
10663634 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10663633 |
gagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagt |
10663534 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctctg |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10663533 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtgtctctctg |
10663454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 296
Target Start/End: Complemental strand, 10184447 - 10184170
Alignment:
| Q |
19 |
acaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaagga |
118 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10184447 |
acaaacaaaaatcttttctcccttgaatgtttctttaactcaactcgaaggacatcaagattattgctatcccaagttgtggaagtgacagattcaagga |
10184348 |
T |
|
| Q |
119 |
gagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10184347 |
gagacttggttactctcataatatcaaaatcctcggacacacaagcccacgccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttg |
10184248 |
T |
|
| Q |
219 |
ggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctctg |
296 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
10184247 |
agcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatagcattatgggttgtgtctctctg |
10184170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 10127135 - 10126856
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10127135 |
acacaaacaaaaatcttttttccctcgagattttctttaacgcaactcgaaggacatcaagattattgctatcccaagttgtggaagtgacagattcaag |
10127036 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10127035 |
gagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagt |
10126936 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctctg |
296 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
10126935 |
tgggcaagggtagtttttcccaaacctcccatgcccaaaattgcaacaacacctatattattatgggatgtgtctctctg |
10126856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 19 - 296
Target Start/End: Complemental strand, 10032208 - 10031931
Alignment:
| Q |
19 |
acaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaagga |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| |
|
|
| T |
10032208 |
acaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagatctttgctatccgaagttgtggaagtgacagattcaagga |
10032109 |
T |
|
| Q |
119 |
gagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttg |
218 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10032108 |
gagactttgttactctcataatatcaaaatcctcagacacacaagcccaggccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttg |
10032009 |
T |
|
| Q |
219 |
ggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctctg |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
10032008 |
ggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggatgcgtctctctg |
10031931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 293
Target Start/End: Complemental strand, 9839068 - 9838792
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||| |
|
|
| T |
9839068 |
acacaaacaaaaatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatcccatgttatggaagtgaccgattcaag |
9838969 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9838968 |
gagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagt |
9838869 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctct |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
9838868 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttatgggttgtgtctct |
9838792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 293
Target Start/End: Complemental strand, 9849946 - 9849670
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||| |
|
|
| T |
9849946 |
acacaaacaaaaatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatcccatgttatggaagtgaccgattcaag |
9849847 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9849846 |
gagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagt |
9849747 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctct |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
9849746 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttatgggttgtgtctct |
9849670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 10580808 - 10580529
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||||||||||||||| |
|
|
| T |
10580808 |
acacaaacaaaaatcttttctcccttgagattttctttaactcaacacgaaggacatcaagattattgctttccgaagttgtggaagtgacagattcaag |
10580709 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580708 |
gagagactttgttactctcataatatcaaaatcctcagacacacaaacccacgccttcatgtcaaaatgttgttgaacttctttatcattgtaaacaagt |
10580609 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctctg |
296 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
|
|
| T |
10580608 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatggattgtgtttctctg |
10580529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 10260905 - 10260626
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| || | |||||||| |||||||| |
|
|
| T |
10260905 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggatgtcaagattattgatatcccaatttctagaagtgactgattcaag |
10260806 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10260805 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacgccttcatgtcaaaatgttgttgaacttctttatcattgtaaacaagt |
10260706 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctctg |
296 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| |
|
|
| T |
10260705 |
tgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattgttggttgtttctctctg |
10260626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 10363660 - 10363938
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |||||||| |||||||||| |
|
|
| T |
10363660 |
acacaaacaaatatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctttccgaagttatggaagtggcagattcaag |
10363759 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10363760 |
gagagactttgttactctcataatatcaaaatcctcagagacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagt |
10363859 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctct |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||| |
|
|
| T |
10363860 |
tgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattattgtcggttgtttctctct |
10363938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 296
Target Start/End: Original strand, 10433906 - 10434185
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||| |||||||| |
|
|
| T |
10433906 |
acacaaacaaaaatcttttctccctcgagtttttctttaactcaacacgaaggacatcaagattattgctatcccaagttctggaagtgaccgattcaag |
10434005 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||| ||||||||||||||| || ||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10434006 |
gagagacttggttactttcaaaatatcaaaatcctgagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagt |
10434105 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctctg |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| | |||||| |
|
|
| T |
10434106 |
tgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattatgagttgtgtttctctg |
10434185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 11769441 - 11769162
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| || | |||||||| |||||||| |
|
|
| T |
11769441 |
acacaaacaaaaatcttttctccctcaagtttttctttaactcaactcgaaggatatcaagattattgctatcccaagttcttgaagtgaccgattcaag |
11769342 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||||| || ||| |||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
11769341 |
gagagacctggttactctcataatatcaaaatcctcagacacgcaagcccatgccttcaaatcaaaatattgttgaacttctttatcattgtagacaagt |
11769242 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctctg |
296 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
11769241 |
tgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatggattgtgtctctctg |
11769162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 295
Target Start/End: Complemental strand, 10088997 - 10088719
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||||||||| || |||| ||||||||||||||||| |
|
|
| T |
10088997 |
acacaaacaaaaatcttttctccctcgagtttttctttaactcaacttgaaggacaccaagatcattgctatccgaagttgtcgaagtgacagattcaag |
10088898 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10088897 |
gagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagt |
10088798 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctct |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||| |
|
|
| T |
10088797 |
tgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattattgtcggttgtttctctct |
10088719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 295
Target Start/End: Complemental strand, 10195880 - 10195602
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||||||||| || |||| ||||||||||||||||| |
|
|
| T |
10195880 |
acacaaacaaaaatcttttctccctcgagtttttctttaactcaacttgaaggacaccaagatcattgctatccgaagttgtcgaagtgacagattcaag |
10195781 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10195780 |
gagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagt |
10195681 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctct |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||| |
|
|
| T |
10195680 |
tgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattattgtcggttgtttctctct |
10195602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 281
Target Start/End: Original strand, 10375707 - 10375971
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| || | |||||||| |||||||| |
|
|
| T |
10375707 |
acacaaacaaaaatcttttctcccttgattttttctttaacgcaactcgaaggacatcaagattattgctatcccatgttcttgaagtgaccgattcaag |
10375806 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
10375807 |
gagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagt |
10375906 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatg |
281 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375907 |
tgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatg |
10375971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 17 - 285
Target Start/End: Complemental strand, 10077476 - 10077208
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| |||| |||||||| || | ||||||| |||||||| |
|
|
| T |
10077476 |
acacaaacaaaaatcttttatccctcgagtttttttttaactcaactcgaaggacatcaagatcattgttatcccaagttctagaagtgatcgattcaag |
10077377 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| | | |||||| | |||||||||||||||| |
|
|
| T |
10077376 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccatgcctgcaaatcaaaatggtatcgaactttataatcattgtaaacaagt |
10077277 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggtt |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10077276 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatcttattatgggtt |
10077208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 280
Target Start/End: Original strand, 11130888 - 11131151
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||| || ||| | ||||||| | ||||||||||| | ||||||||||||| | |||||| | ||||||||||||||||| |
|
|
| T |
11130888 |
acacaaacaaaaatcttttgtctctcaaagttttcttcagttcaactcgaagaaaatcaagattattgttttcccaagcccttgaagtgacagattcaag |
11130987 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||| || |||||||| | ||||||||||||||| || ||||||||||| | | | |||||| |||| |||||||| || |||||||||| ||| | |
|
|
| T |
11130988 |
gagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcattgtaagcaatt |
11131087 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
|| |||||||| |||||||| | ||||||||| || ||||||||||||||||| ||||| |||| |
|
|
| T |
11131088 |
tgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccgatattgttat |
11131151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 17 - 280
Target Start/End: Original strand, 11148716 - 11148979
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||| | ||| | ||||||| | ||||||||||| | ||||||||||||| | |||||| | ||||||||||||||||| |
|
|
| T |
11148716 |
acacaaacaaaaatcttttggctctcaaagttttcttcagttcaactcgaagaaaatcaagattattgttttcccaagcccttgaagtgacagattcaag |
11148815 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
||||| || |||||||| | ||||||||||||||| || ||||||||||| | | | |||||| |||| |||||||| || |||||||||| ||| | |
|
|
| T |
11148816 |
gagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcattgtaagcaatt |
11148915 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
|| |||||||| |||||||| | ||||||||| || ||||||||||||||||| ||||| |||| |
|
|
| T |
11148916 |
tgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccgatattgttat |
11148979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 280
Target Start/End: Original strand, 11159879 - 11160142
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||| || ||| | ||||||||| ||||||||||| | ||||||||||||| | |||||| | | ||||||||||||||||| |
|
|
| T |
11159879 |
acacaaacaaaaatcttttgtcgctcaaagttttctttagttcaactcgaagaaaatcaagattattggtttcccaagctcttgaagtgacagattcaag |
11159978 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
|||| || ||||| | |||||||||||||||||| ||||||||||| | | | ||||||||| | |||||||| || || ||||||||||||| |
|
|
| T |
11159979 |
aagagttttagttacagataaaatatcaaaatcctcagatacacaagcccatgctttgaaatcaaaatgatcttgaactttttcattattgtaaacaagt |
11160078 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
|| ||||| || ||||| || | ||||||||| || |||||||||||||| |||||||| |||| |
|
|
| T |
11160079 |
tgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacgcctatattgttat |
11160142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 280
Target Start/End: Complemental strand, 8861493 - 8861230
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||| || ||| | ||||||||| ||||||||||| | ||||||||||||| | |||||| | | ||||||||||||||||| |
|
|
| T |
8861493 |
acacaaacaaaaatcttttgtctctcaatgttttctttagttcaactcgaagaaaatcaagattattgttttcccaagctcttgaagtgacagattcaag |
8861394 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
|||| || ||||| | ||||||||||||||| || ||||||||||| | | | |||||| || | |||||||| || |||||||||||||||| |
|
|
| T |
8861393 |
aagagttttagttacagttgaaatatcaaaatcctctgatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagt |
8861294 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
|| ||||| || ||||| || | ||||||||| || ||||||||||||||||| ||||| |||| |
|
|
| T |
8861293 |
tgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccgatattgttat |
8861230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 280
Target Start/End: Complemental strand, 10889513 - 10889250
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||| || ||| | ||||||||| ||||||||||| | ||| ||||||||| | |||||| | | ||||| ||||||||||| |
|
|
| T |
10889513 |
acacaaacaaaaatcttttgtctctcaaagttttctttagttcaactcgaagaaaatctagattattgttttcccaagctcttgaagtcacagattcaag |
10889414 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
|||| || ||||| | | |||||||||||||||||| ||||||||||| | | | |||||| || | |||||||| || |||||||||||||||| |
|
|
| T |
10889413 |
aagagttttagttacagttaaaatatcaaaatcctcagatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagt |
10889314 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
|| ||||| || ||||| || | ||||||||| || ||||||||||||||||| ||||| |||| |
|
|
| T |
10889313 |
tgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccgatattgttat |
10889250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 269
Target Start/End: Complemental strand, 13333111 - 13332859
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
|||| |||||||||||||| |||||| || |||| || || ||||||||||| | ||||||||||||| | || | | | | ||||||||||||||| | |
|
|
| T |
13333111 |
acactaacaaaaatcttttatccctcaagtttttattcaattcaactcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatg |
13333012 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
| | || |||||||||| |||||| |||||||| || |||||| |||| || ||| ||||||||| | |||||||||||||||||| |||| |||| |
|
|
| T |
13333011 |
aatggttttagttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagt |
13332912 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
269 |
Q |
| |
|
|||||||| || ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13332911 |
tgggcaagagtggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13332859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 13161182 - 13160935
Alignment:
| Q |
22 |
aacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaaggagag |
121 |
Q |
| |
|
|||||||||||||| |||||| || |||| || |||||||||||||| ||||||||||||||| || | | | | || |||||||||||| | | | |
|
|
| T |
13161182 |
aacaaaaatcttttatccctcaagtttttattcaactcaactcgaagagaatcaagattattgctttcgccagctcttgaggtgacagattcatgaatgg |
13161083 |
T |
|
| Q |
122 |
acttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgggc |
221 |
Q |
| |
|
|| |||||||||| |||||| |||||||| || |||||| |||| || ||| ||||||||| | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
13161082 |
ttttagttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggc |
13160983 |
T |
|
| Q |
222 |
aagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
269 |
Q |
| |
|
||| || ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13160982 |
aagagtggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13160935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 10527455 - 10527281
Alignment:
| Q |
106 |
acagattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcat |
205 |
Q |
| |
|
|||||||||| |||||||||||||||||||| || ||| |||||||| || ||| || |||| || | | ||||||||| |||| ||| | || ||||| |
|
|
| T |
10527455 |
acagattcaatgagagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaaccttttcatcat |
10527356 |
T |
|
| Q |
206 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
||||||||||||| |||||||| ||||| || | ||||||||| ||||| |||||||||||||||| |||||||| |
|
|
| T |
10527355 |
tgtaaacaagttgtgcaagggttgttttaccgacacctcccatacccaagattgcaacaacacctaaattattat |
10527281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 13171233 - 13170986
Alignment:
| Q |
22 |
aacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaaggagag |
121 |
Q |
| |
|
|||||||||||||| |||||| || ||| || || ||||||||||| | ||||||||||||| | || | | | | ||||||||||||||| | | | |
|
|
| T |
13171233 |
aacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatgg |
13171134 |
T |
|
| Q |
122 |
acttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgggc |
221 |
Q |
| |
|
|| |||||||||| |||||| |||||||| || |||||| |||| || ||| ||||||||| | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
13171133 |
ttttagttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggc |
13171034 |
T |
|
| Q |
222 |
aagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
269 |
Q |
| |
|
||| || ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13171033 |
aagagtggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13170986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 13344291 - 13344044
Alignment:
| Q |
22 |
aacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaaggagag |
121 |
Q |
| |
|
|||||||||||||| |||||| || ||| || || ||||||||||| | ||||||||||||| | || | | | | ||||||||||||||| | | | |
|
|
| T |
13344291 |
aacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatgg |
13344192 |
T |
|
| Q |
122 |
acttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgggc |
221 |
Q |
| |
|
|| || ||||||| |||||| |||||||| || |||||| |||| || ||| ||||||||| | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
13344191 |
ttttagtgactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggc |
13344092 |
T |
|
| Q |
222 |
aagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
269 |
Q |
| |
|
||| || ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13344091 |
aagagtggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13344044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 280
Target Start/End: Original strand, 11781954 - 11782128
Alignment:
| Q |
106 |
acagattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcat |
205 |
Q |
| |
|
||||||||||||||||||||||||| ||| | || ||| |||||||| || |||||| |||| || | | |||||||||||||| ||||| ||||| |
|
|
| T |
11781954 |
acagattcaaggagagacttggttattctaacaacatcgaaatcctccgatacacaaacccagactttgaaatcaaaatgttgttcaactttcacatcat |
11782053 |
T |
|
| Q |
206 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
|||||||||| || |||||||| ||||| || | |||||||| ||||||||||| |||||||||| |||||||| |
|
|
| T |
11782054 |
tgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccaaaattgcgacaacacctaaattattat |
11782128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 280
Target Start/End: Complemental strand, 10517580 - 10517408
Alignment:
| Q |
108 |
agattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattg |
207 |
Q |
| |
|
||||||||||| |||||||||| |||| |||| ||||||||||||||| |||||| |||| | | | |||||||||||||| ||||| | ||||||| |
|
|
| T |
10517580 |
agattcaaggatagacttggttgctctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattg |
10517481 |
T |
|
| Q |
208 |
taaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| |||| ||||||| ||||||||| |||||||| |
|
|
| T |
10517480 |
taaacaaactgtgcaagggtcgttttaccgacgcctcccatacccacaattgcagcaacacctaaattattat |
10517408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 13289867 - 13289620
Alignment:
| Q |
22 |
aacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaaggagag |
121 |
Q |
| |
|
|||||||||||||| |||||| || ||| || | ||||||||||| ||||||||||||||| || | | | | ||||||||||||||| | | | |
|
|
| T |
13289867 |
aacaaaaatcttttatccctcaagttttgattcagttcaactcgaagagaatcaagattattgctttcaccacctcttgaagtgacagattcatgaatgg |
13289768 |
T |
|
| Q |
122 |
acttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgggc |
221 |
Q |
| |
|
|| |||||||||| |||||| |||||||| || |||||| |||| || ||| ||||||||| | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
13289767 |
ttttagttactctcaaaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggc |
13289668 |
T |
|
| Q |
222 |
aagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
269 |
Q |
| |
|
||| || ||||| || | ||| ||||| ||||||||||| || ||||| |
|
|
| T |
13289667 |
aagagtggttttgccaacaccgcccatacccaaaattgcgaccacacc |
13289620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 10527565 - 10527490
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatccca |
92 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
10527565 |
acacaaacaaaaatctcttctcccttgagattttctttaactgaactcgaaggatatcaagattattgctttccca |
10527490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 10500674 - 10500500
Alignment:
| Q |
106 |
acagattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcat |
205 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| || ||| |||||||| | |||||| ||| || ||| ||||||||||| || || || | || | |
|
|
| T |
10500674 |
acagattcaaggagagatttggttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaattttatcgtcgt |
10500575 |
T |
|
| Q |
206 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
||||||||||||| ||||| || ||||| || | |||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
10500574 |
tgtaaacaagttgagcaagtgttgttttaccgacgcctcccatacccaaaattgcaacaacacctaaattattat |
10500500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 10517692 - 10517615
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaa |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| | || || || ||||||||||||| ||||||||||| ||| ||||||| |
|
|
| T |
10517692 |
acacaaacaaaaatcttttctccctcgagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaa |
10517615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 11781844 - 11781921
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaa |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| | || || || ||||||||||||| ||||||||||| ||| ||||||| |
|
|
| T |
11781844 |
acacaaacaaaaatcttttctccctcgagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaa |
11781921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 10500781 - 10500712
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgct |
86 |
Q |
| |
|
||||||||||||||||| | ||| || | |||| ||||||||||| |||||| ||||||||||||||| |
|
|
| T |
10500781 |
acacaaacaaaaatcttctatccatcaaatgtttcattaactcaacttgaaggatatcaagattattgct |
10500712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 17 - 295
Target Start/End: Complemental strand, 26907104 - 26906826
Alignment:
| Q |
17 |
acacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaag |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||||| |||||||| |
|
|
| T |
26907104 |
acacaaacaaaaatcttttctcccttgagtttttccttaactcaactcgaaggacatcaagattattggtatcccaagttctggaagtgaccgattcaag |
26907005 |
T |
|
| Q |
117 |
gagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagt |
216 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
26907004 |
gagagatttggttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgccgttgaacttctttatcattgtaaagaagt |
26906905 |
T |
|
| Q |
217 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtatctctct |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26906904 |
tgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgggttgtgtctctct |
26906826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 135755 - 136002
Alignment:
| Q |
22 |
aacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaaggagag |
121 |
Q |
| |
|
|||||||||||||| |||||| || ||| || || ||||||||||| | ||||||||||||| | || | | | | ||||||||||||||| | | | |
|
|
| T |
135755 |
aacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatgg |
135854 |
T |
|
| Q |
122 |
acttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgggc |
221 |
Q |
| |
|
|| |||||||||| |||||| |||||||| || |||||| |||| || ||| ||||||||| | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
135855 |
ttttagttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggc |
135954 |
T |
|
| Q |
222 |
aagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
269 |
Q |
| |
|
||| || ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
135955 |
aagagtggttttgccaacaccgcccatacccaaaattgcaaccacacc |
136002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 145806 - 146053
Alignment:
| Q |
22 |
aacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaaggagag |
121 |
Q |
| |
|
|||||||||||||| |||||| || ||| || || ||||||||||| | ||||||||||||| | || | | | | ||||||||||||||| | | | |
|
|
| T |
145806 |
aacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattattgttttcaccacctcttgaagtgacagattcatgaatgg |
145905 |
T |
|
| Q |
122 |
acttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgggc |
221 |
Q |
| |
|
|| |||||||||| |||||| |||||||| || |||||| |||| || ||| ||||||||| | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
145906 |
ttttagttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggc |
146005 |
T |
|
| Q |
222 |
aagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
269 |
Q |
| |
|
||| || ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
146006 |
aagagtggttttgccaacaccgcccatacccaaaattgcaaccacacc |
146053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 106 - 280
Target Start/End: Original strand, 17852895 - 17853069
Alignment:
| Q |
106 |
acagattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcat |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||||||| || || |||||| |||| | | | ||||||||| |||| ||| | || ||||| |
|
|
| T |
17852895 |
acagattcaaggagagacttggttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaaccttttcatcat |
17852994 |
T |
|
| Q |
206 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
|||||||||| || |||||||| ||||| || | ||||||||| ||||| |||||||||||||||| ||| |||| |
|
|
| T |
17852995 |
tgtaaacaagctgtgcaagggtcgttttaccgacacctcccatccccaatattgcaacaacacctaaattgttat |
17853069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 7128998 - 7129044
Alignment:
| Q |
178 |
tcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaag |
224 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||||||| ||||| |
|
|
| T |
7128998 |
tcaaaatgttgttgcacttctttgtcattgtatacaagttgagcaag |
7129044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 7482138 - 7482094
Alignment:
| Q |
180 |
aaaatgttgttgaacttctttatcattgtaaacaagttgggcaag |
224 |
Q |
| |
|
|||||||||||| |||||||| |||||||| |||||||| ||||| |
|
|
| T |
7482138 |
aaaatgttgttgcacttctttgtcattgtatacaagttgagcaag |
7482094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 11485135 - 11484961
Alignment:
| Q |
106 |
acagattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcat |
205 |
Q |
| |
|
|||||||||||||| |||||||||| |||| | ||| |||||||| || |||||| |||| | | | ||||||||| |||| ||||| || ||| | |
|
|
| T |
11485135 |
acagattcaaggagggacttggttatcctcacgacatcgaaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactttttcatcgt |
11485036 |
T |
|
| Q |
206 |
tgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
||||||||||||| |||||||| ||||| || | |||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
11485035 |
tgtaaacaagttgtgcaagggtcgttttaccgacgcctcccataaccaaaattgcaacaacacctaaattattat |
11484961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 44957735 - 44957834
Alignment:
| Q |
181 |
aaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
|||||||||| ||||| | ||||||||||||||||||| || || || ||||| || | ||||||||| || || | ||||||||||||| |||||||| |
|
|
| T |
44957735 |
aaatgttgttcaacttttatatcattgtaaacaagttgtgcgagagtcgttttaccgacacctcccatacctaaggtggcaacaacacctaaattattat |
44957834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 280
Target Start/End: Complemental strand, 29836820 - 29836587
Alignment:
| Q |
47 |
ttttctttaactcaactcgaaggacatcaagattattgctatcccaaattgtggaagtgacagattcaaggagagacttggttactctcataatatcaaa |
146 |
Q |
| |
|
||||||| || ||||||||||| | |||||| |||||| ||| ||| | | ||||||||| |||||||||||| ||||||||||||| |||||||| |
|
|
| T |
29836820 |
ttttcttcaattcaactcgaagaagatcaaggttattggtattccattctcttgaagtgacaacttcaaggagagatttggttactctcaacatatcaaa |
29836721 |
T |
|
| Q |
147 |
atcctcagacacacaagcccacaccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctccc |
246 |
Q |
| |
|
||| |||||||||||| |||| || | ||||||||| | || |||||||| | ||||| | |||| | || ||||| ||||| || | ||||||| |
|
|
| T |
29836720 |
atcttcagacacacaaacccagacttgtacatcaaaatgatttttaacttcttcctggttgtatataagtcgagcgagggtcgttttaccgatacctccc |
29836621 |
T |
|
| Q |
247 |
atgcccaaaattgcaacaacacctatattattat |
280 |
Q |
| |
|
||||| |||||| || |||||||||||||||| |
|
|
| T |
29836620 |
atgcctgtaattgcgactacacctatattattat |
29836587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 267
Target Start/End: Original strand, 31679755 - 31679845
Alignment:
| Q |
177 |
atcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
267 |
Q |
| |
|
||||||| ||| |||||| |||||||||||||||| |||||| || |||| ||||| || | |||||||||||| ||||||| ||||||| |
|
|
| T |
31679755 |
atcaaaacgttcttgaacatctttatcattgtaaagaagttgagctagggctgttttaccgacacctcccatgccgaaaattgaaacaaca |
31679845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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