View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12882_low_23 (Length: 464)
Name: NF12882_low_23
Description: NF12882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12882_low_23 |
 | |
|
| [»] scaffold1207 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 394; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 14 - 448
Target Start/End: Complemental strand, 30775655 - 30775225
Alignment:
| Q |
14 |
gcagagatgtatttggaatccccagttaaaaatgcagttgtcactgtatgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggt |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30775655 |
gcagagatgtatttggaatccccagttaaaaatgcagttatcactgt----gcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggt |
30775560 |
T |
|
| Q |
114 |
gccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagagga |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30775559 |
gccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagagga |
30775460 |
T |
|
| Q |
214 |
atatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactca |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
30775459 |
atatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaactgctggaaacactca |
30775360 |
T |
|
| Q |
314 |
catcgggggagaggactttgataacagaatgttgaactactttgtagaggaatttaagacgaagaacaacgtggacattacccgcgatccaagagctttg |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
30775359 |
catcgggggagaggactttgataacagaatgttgaattactttgtagaggaatttaagacgaagaacaacgtggacattaccgggaatccaagagctttg |
30775260 |
T |
|
| Q |
414 |
agacagttgagaactgcatgtgaaaaggcaaaaag |
448 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
30775259 |
agacagttgagaactgcatgtgaaaaggcaaaaag |
30775225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 62 - 393
Target Start/End: Complemental strand, 35132807 - 35132476
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
||||||||||||||| | |||| | || |||||||||||||| ||||||||||| |||||||||| |||||||||||| |||| ||||| || ||||| |
|
|
| T |
35132807 |
tgtgcctgcttattttagtgattctcaacgaaaagccactatagatgctggtgctattgctggtcccaatgttatgagagtaatgaatgaacctactgcc |
35132708 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
||||| |||||||||| ||||| |||||| | |||| || || |||||||||||||| |||||||||||||| ||||||||||| || | | |
|
|
| T |
35132707 |
gcagcggttgcatatggccttgacaagagatctgattgtgctggagaacaaaatatttttgtcttcgatcttggtggtggcacttttgatgtttcaatac |
35132608 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
| || |||| ||| |||| || ||||||| || ||| | ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
35132607 |
ttactattaaggataatgtcttccaagttaaggccactgccggaaacactcatctcggtggagaggactttgataacagaatggtgaactactttgtaca |
35132508 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
|| || |||| |||||||| || ||||||| |
|
|
| T |
35132507 |
agagttcaagagaaagaacaaagtagacatta |
35132476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 63 - 391
Target Start/End: Original strand, 9335701 - 9336029
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
||||| ||||| ||||||||| | |||||||| ||||| || ||||||||| | |||||||| |||||||| || | ||||| ||||| || ||||| | |
|
|
| T |
9335701 |
gtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggccttaatgtcattcggataatcaatgaacctactgctg |
9335800 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttct |
262 |
Q |
| |
|
|||||||||||||||| ||||| |||||| | ||||||| | | | |||||||||||||||||||| ||||| || ||||||||||||||| | || |
|
|
| T |
9335801 |
cagctattgcatatggccttgataagagaaatgactgtgatggtaaccgaaatatttttgtctttgatctgggtggcggtacttttgatgtgtctatcct |
9335900 |
T |
|
| Q |
263 |
caccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagag |
362 |
Q |
| |
|
||| |||| | |||| | |||||||| ||||| || | |||||||| ||| | || || ||||||||||||||||||||| | ||||| ||||| || |
|
|
| T |
9335901 |
cacaattaagggtgatctatttgaagtaaaagccaccgcaggaaacacgcaccttggaggcgaggactttgataacagaatggttaactattttgtggaa |
9336000 |
T |
|
| Q |
363 |
gaatttaagacgaagaacaacgtggacat |
391 |
Q |
| |
|
|| || || | |||||| || |||||||| |
|
|
| T |
9336001 |
gagttaaaaaagaagaataaagtggacat |
9336029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 63 - 262
Target Start/End: Original strand, 23596395 - 23596594
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
|||||||| || ||||| ||| |||| || |||| |||| ||||||||||| |||| |||| || ||||| |||||||| ||||| ||||||||||| | |
|
|
| T |
23596395 |
gtgcctgcatacttcaacgattcacaacgtcaagctactaaggatgctggtgtcatttctggactcaatgtgatgagaattattaacgagcccactgctg |
23596494 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttct |
262 |
Q |
| |
|
| |||||||| ||||| ||||| |||| || || || || ||||| ||| || || | || |||||||||||||| ||||||||||| || ||||| |
|
|
| T |
23596495 |
ccgctattgcttatggtcttgataagaaagctacaagtactggtgagaagaacgttcttattttcgatcttggtggtggaacttttgatgtttcacttct |
23596594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 213; Significance: 1e-116; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 23 - 448
Target Start/End: Original strand, 16661766 - 16662187
Alignment:
| Q |
23 |
tatttggaatccccagttaaaaatgcagttgtcactgtatgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgct |
122 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||| ||||||||||| || ||| | |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16661766 |
tatttggaatcaccggttaaaaatgcagttgtcactgtt----cctgcttattttaacgattctcagcgaaaagccaccatggatgctggtgccattgct |
16661861 |
T |
|
| Q |
123 |
ggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttg |
222 |
Q |
| |
|
|| ||||| ||| |||| ||||| ||||| |||||||||||||||||||||||||| ||||| || ||| ||| ||||||| ||| || |||||||||| |
|
|
| T |
16661862 |
ggccttaacgttgtgaggataatcaatgaacccactgcagcagctattgcatatggccttgacaaaagaagtaattgtgatggtgaaagaaatatttttg |
16661961 |
T |
|
| Q |
223 |
tctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcggggg |
322 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| |||| || |||||| |||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
16661962 |
tctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcggggg |
16662061 |
T |
|
| Q |
323 |
agaggactttgataacagaatgttgaactactttgtagaggaatttaagacgaagaacaacgtggacattacccgcgatccaagagctttgagacagttg |
422 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||| | ||||||||| ||||| || || | |||||||||| ||||| |||| |
|
|
| T |
16662062 |
agaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagccttgaggaggttg |
16662161 |
T |
|
| Q |
423 |
agaactgcatgtgaaaaggcaaaaag |
448 |
Q |
| |
|
|||||| | ||||||||||| ||||| |
|
|
| T |
16662162 |
agaacttcttgtgaaaaggcgaaaag |
16662187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 62 - 391
Target Start/End: Original strand, 16657326 - 16657655
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||| ||||| ||||||||| | |||||||||||||| || |||||||||||||| ||||| |||||||| || |||| || ||||| || ||||| |
|
|
| T |
16657326 |
tgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccatcgctggccttaatgtcattcgaattatcaatgaacctactgct |
16657425 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
||||||||||||||||| ||||| |||||| || ||||||| | | ||||||||||||||||||| ||||| ||||| ||||||||||||||| | | |
|
|
| T |
16657426 |
gcagctattgcatatggtcttgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctatcc |
16657525 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
| || |||| | |||||| ||||| || ||||| ||| | |||||||||||| | ||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
16657526 |
ttacaattaagggtgatgtttttgaggtaaaagccactgccggaaacactcaccttgggggagaggactttgataacagaacggtgaactactttgtaga |
16657625 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacat |
391 |
Q |
| |
|
||| ||| | | |||||| || |||||||| |
|
|
| T |
16657626 |
ggagtttcaaaagaagaataaggtggacat |
16657655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 63 - 353
Target Start/End: Complemental strand, 12235047 - 12234757
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
||||||||||||||||||||| | || |||||||| ||||| |||||||||| ||||||||| || ||||||||||| |||| || || |||| |||| |
|
|
| T |
12235047 |
gtgcctgcttatttcaatgattctcaacgaaaagcaactatagatgctggtgtcattgctggcctcaatgttatgagggtaatgaacgaacccatggcag |
12234948 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttct |
262 |
Q |
| |
|
| ||| |||||||||| ||||| |||||| | |||| || || | ||||||||||| |||||||| || ||||| ||||||||||||||||| || |
|
|
| T |
12234947 |
ccgctgttgcatatggtcttgacaagagaactgattgtgttggagaacgaaatatttttgtttttgatctcggcggtggcacttttgatgtgtctctcct |
12234848 |
T |
|
| Q |
263 |
caccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactac |
353 |
Q |
| |
|
|| || | || | |||| || |||||||||| || | |||||||||||| ||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
12234847 |
aacaatcaaaggtaatgtcttccaagttaaagccacagccggaaacactcacctcgggggagaggactttgataacagaatggtaaactac |
12234757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 44 - 448
Target Start/End: Complemental strand, 7542599 - 7542199
Alignment:
| Q |
44 |
aatgcagttgtcactgtatgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaata |
143 |
Q |
| |
|
||||||||||| |||||| ||||||||||| |||||| | || |||||||||||||| ||||| |||||||||||||| || ||||||||||| | |
|
|
| T |
7542599 |
aatgcagttgttactgta----cctgcttattttaatgattctcaacgaaaagccactatagatgcgggtgccattgctggcctcaatgttatgagggca |
7542504 |
T |
|
| Q |
144 |
attaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtggga |
243 |
Q |
| |
|
|| ||||| || ||||| |||||| |||||||||| ||||| |||||| | | ||||| ||| | ||||||||||| ||||||||||| ||||| | |
|
|
| T |
7542503 |
atgaatgaacctactgccgcagctgttgcatatggccttgacaagagaactgattatgatggagagcgaaatatttttgtttttgatcttggcggtggca |
7542404 |
T |
|
| Q |
244 |
cttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaat |
343 |
Q |
| |
|
|||||||||||||| | || || |||| | | || ||||||| || ||| |||| ||||||||| | || ||||| ||||||||||| ||||| |
|
|
| T |
7542403 |
cttttgatgtgtctttactaacgattaagggcaacaacttccaagttaaggccactgctggcaacactcaccttggtggagaagactttgataatagaat |
7542304 |
T |
|
| Q |
344 |
gttgaactactttgtagaggaatttaagacgaagaacaacgtggacattacccgcgatccaagagctttgagacagttgagaactgcatgtgaaaaggca |
443 |
Q |
| |
|
| ||||||||||||| | || || |||| |||||||| |||||||||| | |||||| ||| ||||| |||||||||||| ||||| | |||| |
|
|
| T |
7542303 |
ggcgaactactttgtacaagagttcaagagaaagaacaaagtggacattagtgggaatccaaaagccttgaggaggttgagaactgcttgtgagagggca |
7542204 |
T |
|
| Q |
444 |
aaaag |
448 |
Q |
| |
|
||||| |
|
|
| T |
7542203 |
aaaag |
7542199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 63 - 358
Target Start/End: Complemental strand, 14703766 - 14703471
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
|||||||||||||| | |||| | || |||||||||||||||||||||||| ||||| || || ||||||||||| |||| ||||| || || || | |
|
|
| T |
14703766 |
gtgcctgcttattttagtgattctcaaagaaaagccactatggatgctggtgttattgccggcctcaatgttatgagggtaatgaatgaacctacagctg |
14703667 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttct |
262 |
Q |
| |
|
|||||||||||||||| ||||| |||||| | | || || || | ||||| ||||||||||||||||||||||| |||||||| |||||||| || |
|
|
| T |
14703666 |
cagctattgcatatggccttgacaagagaactgattatggtggagaacgtaatatatttgtctttgatcttggtggtggtacttttgacgtgtctctcct |
14703567 |
T |
|
| Q |
263 |
caccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgt |
358 |
Q |
| |
|
|| |||| | || || || |||| || ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
14703566 |
aacaattaagggcaccgtcttccaaattaaggctactgctggaaacactcacctcgggggagaggacttcgataacagaatggtgaactactttgt |
14703471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 66 - 382
Target Start/End: Original strand, 12245219 - 12245535
Alignment:
| Q |
66 |
cctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcag |
165 |
Q |
| |
|
||||||||||| | |||| | ||||||||||| || || |||||||| | ||||||||||| ||||||||||| |||| ||||| |||||||| |||| |
|
|
| T |
12245219 |
cctgcttattttagtgattctcagcgaaaagcaacgatagatgctggctcaattgctggtctcaatgttatgagggtaatgaatgaacccactgctgcag |
12245318 |
T |
|
| Q |
166 |
ctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcac |
265 |
Q |
| |
|
|| |||||||||| ||||| ||||||| | |||| || || || || |||||||| ||||||||||||||||| |||||||| || ||| | || || |
|
|
| T |
12245319 |
ctgttgcatatggccttgaaaagagagctgattgtgttggagaaagaaacatttttgtgtttgatcttggtggtggcacttttgacgtttctatcctaac |
12245418 |
T |
|
| Q |
266 |
cattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagaggaa |
365 |
Q |
| |
|
|||| ||| | | || ||||||| || ||| |||||||||||||| | || |||||||| |||||||| |||||| | |||||||||| | |||| |
|
|
| T |
12245419 |
tattaaggataacatcttccaagttaaggccactgctggaaacactcaccttggaggagaggattttgataatagaatggtaaactactttgcacaggag |
12245518 |
T |
|
| Q |
366 |
tttaagacgaagaacaa |
382 |
Q |
| |
|
|| |||| |||||||| |
|
|
| T |
12245519 |
ttcaagagaaagaacaa |
12245535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 382
Target Start/End: Original strand, 12258539 - 12258710
Alignment:
| Q |
211 |
ggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacac |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| ||| |||| ||| ||||||| || || |||||||||| |
|
|
| T |
12258539 |
ggaatatttttgtctttgatcttggtggtggcacttttgatgtgtctctactaaccattaaggataatgtctttcaagttaaggctacagctggaaacac |
12258638 |
T |
|
| Q |
311 |
tcacatcgggggagaggactttgataacagaatgttgaactactttgtagaggaatttaagacgaagaacaa |
382 |
Q |
| |
|
||| | || ||||||||||||||||| |||||| ||| ||||||||||| || || |||| |||||||| |
|
|
| T |
12258639 |
gcaccttggaggagaggactttgataatagaatggtgagttactttgtagaagagttcaagagaaagaacaa |
12258710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 63 - 393
Target Start/End: Complemental strand, 43625770 - 43625440
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
||||||||||| ||||||||| | |||||||||||||| || |||| ||||| ||||| || ||||||||| | || |||| ||||| || || || | |
|
|
| T |
43625770 |
gtgcctgcttacttcaatgattctcagcgaaaagccaccatagatgttggtgtcattgtcggccttaatgttttacgagtaatcaatgaaccaacagctg |
43625671 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttct |
262 |
Q |
| |
|
| ||| | ||||| || ||| | |||||| || |||| || || | |||||||| ||||||| ||||||||||| ||||||||||||||| | || |
|
|
| T |
43625670 |
ctgctctagcatacggccttaacaagagaattaattgtgttggagaacgaaatattttcatctttgaccttggtggtggtacttttgatgtgtctatact |
43625571 |
T |
|
| Q |
263 |
caccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagag |
362 |
Q |
| |
|
|| |||| || | || || |||||||| ||| |||||||||||||| | || ||||||||||||||| | |||||| |||||||||||| ||| |
|
|
| T |
43625570 |
tacaattaaggacaaggtcttccgtgttaaagccactgctggaaacactcaccttggaggagaggactttgatgatagaatggtgaactactttgcagaa |
43625471 |
T |
|
| Q |
363 |
gaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
|||||| ||| ||||||||| ||||| |||| |
|
|
| T |
43625470 |
gaatttgagaagaagaacaatgtggatatta |
43625440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 69 - 337
Target Start/End: Complemental strand, 11999746 - 11999478
Alignment:
| Q |
69 |
gcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagcta |
168 |
Q |
| |
|
|||||||| | |||| | || |||||||||||||| ||||| ||||| |||||||| | |||||||| || |||| ||||| |||||||| ||| || |
|
|
| T |
11999746 |
gcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcaactg |
11999647 |
T |
|
| Q |
169 |
ttgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccat |
268 |
Q |
| |
|
|||||||||| ||||| ||||||| | |||| || || || || ||||| |||||||||||||| ||||| ||||||||| ||||| | || || || |
|
|
| T |
11999646 |
ttgcatatggccttgacaagagagctgattgtgttggagaaagaaacattttagtctttgatcttggcggtggcacttttgatttgtctatactaacaat |
11999547 |
T |
|
| Q |
269 |
tagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataa |
337 |
Q |
| |
|
|| || |||| || ||||||| || || |||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
11999546 |
taaggacaatgtcttccaagttaaggccacagctggaaacactcacttcggaggagaggattttgataa |
11999478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 17716546 - 17716618
Alignment:
| Q |
106 |
atgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatgg |
178 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||| ||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
17716546 |
atgctggtgctattgctggtcttaatttcatgagaattattaatgagcccactgctgcagccattgcttatgg |
17716618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 35)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 448
Target Start/End: Original strand, 8585471 - 8585901
Alignment:
| Q |
14 |
gcagagatgtatttggaatccccagttaaaaatgcagttgtcactgtatgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggt |
113 |
Q |
| |
|
||||||| |||||| |||| || ||| ||||||||||||| ||||| ||||||||||||||||||| | |||||||||||||| |||||||||||| |
|
|
| T |
8585471 |
gcagagacatatttgaaatcacctgttcaaaatgcagttgtgactgt----gcctgcttatttcaatgattctcagcgaaaagccaccatggatgctggt |
8585566 |
T |
|
| Q |
114 |
gccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagagga |
213 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||| ||||| || | ||||| ||||||| ||| | | |
|
|
| T |
8585567 |
gccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttgacaacaaaggtaactgtgatggtgaacgaa |
8585666 |
T |
|
| Q |
214 |
atatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactca |
313 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| || |||||| ||||||||||||||||| ||||||| ||||| |
|
|
| T |
8585667 |
atatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcaaccgctggaaatactca |
8585766 |
T |
|
| Q |
314 |
catcgggggagaggactttgataacagaatgttgaactactttgtagaggaatttaagacgaagaacaacgtggacattacccgcgatccaagagctttg |
413 |
Q |
| |
|
| | ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||| | |||||||||||| |
|
|
| T |
8585767 |
ccttgggggaggggactttgataacagaatgttgaactactttgttgaggaatttaagagaaagaacaatgtggatattactaagaacccaagagctttg |
8585866 |
T |
|
| Q |
414 |
agacagttgagaactgcatgtgaaaaggcaaaaag |
448 |
Q |
| |
|
|| | ||| ||||| |||||||||||||||||||| |
|
|
| T |
8585867 |
aggcggttaagaacggcatgtgaaaaggcaaaaag |
8585901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 23 - 345
Target Start/End: Complemental strand, 8628926 - 8628608
Alignment:
| Q |
23 |
tatttggaatccccagttaaaaatgcagttgtcactgtatgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgct |
122 |
Q |
| |
|
|||||| |||| || || ||||||||||||||||| ||||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
8628926 |
tatttgaaatcacctgtaaaaaatgcagttgtcac----cgtgcctgcttatttcaatgattctcagcgaaaagccaccatgaatgctggtgccattgct |
8628831 |
T |
|
| Q |
123 |
ggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttg |
222 |
Q |
| |
|
|| |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||| ||||| || | |||||||||||||| ||| | |||||||||| |
|
|
| T |
8628830 |
ggccttaatgttatgaggataatcaatgaccccactgctgcagctattgcatatggccttgacaacaaaggtaggtgtgatggtgaacgaaatatttttg |
8628731 |
T |
|
| Q |
223 |
tctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcggggg |
322 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| ||||| |||| || |||||| |||||||||||||| ||| ||||||| |||||| | || || |
|
|
| T |
8628730 |
tgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccactgctggaaatactcaccttggtgg |
8628631 |
T |
|
| Q |
323 |
agaggactttgataacagaatgt |
345 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
8628630 |
agaggactttgataacagaatgt |
8628608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 63 - 393
Target Start/End: Complemental strand, 8659721 - 8659391
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
|||||||| || ||||||||| | |||||||||||||| || ||| | |||||||||||||| |||||||| || ||||||||||| || ||||| | |
|
|
| T |
8659721 |
gtgcctgcatagttcaatgattctcagcgaaaagccaccatagattccggtgccattgctggccttaatgtcattcagataattaatgaacctactgctg |
8659622 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttct |
262 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||||| | | |||||||| |||||||||||||||||||| ||||||||||||||| | || |
|
|
| T |
8659621 |
cagctattgcatatggttttgacaagagaggtgactgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatcct |
8659522 |
T |
|
| Q |
263 |
caccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagag |
362 |
Q |
| |
|
|| || | | |||||| |||||||| ||||| |||||||||||||||||| | || |||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
8659521 |
tacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagag |
8659422 |
T |
|
| Q |
363 |
gaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
|| || || | |||||| || |||||||||| |
|
|
| T |
8659421 |
gagttcaaaaagaagaataaagtggacatta |
8659391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 62 - 385
Target Start/End: Original strand, 13333265 - 13333588
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||| ||||| ||||||||| | |||||||| ||||| || ||||||||||| |||||||| |||||| | || ||||||| ||||| || ||||| |
|
|
| T |
13333265 |
tgtgccggcttacttcaatgattctcagcgaaaggccaccatagatgctggtgctattgctggccttaatatcattcgaataatcaatgaacctactgct |
13333364 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
||||||||||||||||| ||||| |||||| || ||||||| | || | |||||||||||||||||||| |||||||| ||||||||||||||| | | |
|
|
| T |
13333365 |
gcagctattgcatatggccttgacaagagacgtgattgtgatggtaagcgaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatcc |
13333464 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
| || |||| | |||||| |||||||| ||||| || | |||||||||||| | |||||||| ||||| |||||||||||| ||||||| ||||| || |
|
|
| T |
13333465 |
ttacaattatgggtgatgtctttgaagtaaaagccaccgcaggaaacactcaccttgggggagaagacttcgataacagaatggtgaactattttgttga |
13333564 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgt |
385 |
Q |
| |
|
||| || || | |||||| ||||| |
|
|
| T |
13333565 |
ggagttcaaaaagaagaataacgt |
13333588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 62 - 391
Target Start/End: Complemental strand, 8667778 - 8667449
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||| ||||| ||||||||| | |||||||| ||||| || ||||||||| | |||||||| |||||||| || | ||||| ||||| || ||||| |
|
|
| T |
8667778 |
tgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgcg |
8667679 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
||||||||||||||||| ||||| |||||| | ||||||| | | |||||||||||||||||||| ||||| |||||||||||||||||| | | |
|
|
| T |
8667678 |
gcagctattgcatatggccttgacaagagaaatgactgtgatggtagccgaaatatttttgtctttgatctgggtggcgggacttttgatgtgtctatcc |
8667579 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
|||| |||| | |||||| |||||||| ||||| ||| | |||||||||||| | ||||| |||||||| |||||||||||| ||||||| ||||| || |
|
|
| T |
8667578 |
tcacaattaagggtgatgtctttgaagtgaaagccactgcaggaaacactcaccttgggggcgaggacttcgataacagaatggtgaactattttgttga |
8667479 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacat |
391 |
Q |
| |
|
||| || || | |||||| || |||||||| |
|
|
| T |
8667478 |
ggagttaaaaaagaagaataaagtggacat |
8667449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 62 - 391
Target Start/End: Original strand, 10494183 - 10494512
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||| ||||| ||||| ||| | || ||||| || ||||| ||||||||||| |||||||| |||||||| || | ||||| ||||| || ||||| |
|
|
| T |
10494183 |
tgtgccggcttacttcaacgattctcaacgaaaggctactattgatgctggtgctattgctggccttaatgtcattcggataatcaatgaacctactgct |
10494282 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
||||||||||||||||| ||||| |||||| || ||||| | | | | |||||||||||||||||||| |||||||| ||||||||||||||| | | |
|
|
| T |
10494283 |
gcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatcc |
10494382 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
|||| |||| | |||||| |||||||| ||||| ||| | || ||||||||| | |||||||||||||| |||||||||||| |||| || ||||| || |
|
|
| T |
10494383 |
tcacaattaagggtgatgtctttgaagtaaaagccactgcaggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttga |
10494482 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacat |
391 |
Q |
| |
|
||| || || | |||||| ||||||||||| |
|
|
| T |
10494483 |
ggagttcaaaaagaagaataacgtggacat |
10494512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 62 - 358
Target Start/End: Complemental strand, 8602333 - 8602037
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||| |||||||| |||||| | |||||||||||||| | ||||||||||||||||||||||| ||||| ||| | ||||| |||||||| |||||| |
|
|
| T |
8602333 |
tgtgccggcttattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctggtctcaatgtaatgcggataatcaatgagccaactgca |
8602234 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
|| ||| |||||||||| ||| | ||||||| || |||| || ||||| |||||||| | ||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
8602233 |
gctgctcttgcatatggccttcaaaagagagctaattgtgttgaagagagaaatattttcatatttgatcttggtggtggaacttttgatgtttctcttc |
8602134 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgt |
358 |
Q |
| |
|
|||| |||| || || | |||||||| || || ||||| ||| |||| ||| | || |||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
8602133 |
tcacaattaagaataatctctttgaagtcaaggccacttccggagacacacaccttggaggagaggactttgataaccgaatggtgaaccactttgt |
8602037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 62 - 393
Target Start/End: Complemental strand, 8654809 - 8654478
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||| || || |||||||| | ||||||||||| || || |||||||||||||||||||| ||||| || || | ||| | ||||| || ||||| |
|
|
| T |
8654809 |
tgtgccggcatacttcaatgactctcagcgaaaagcaaccatagatgctggtgccattgctggacttaacgtcattcggatactcaatgaacctactgcc |
8654710 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
||||||||||||||||| ||||| ||| || ||| | ||||| | | |||||||||| || ||||||||||||||||| ||||||||||||||| | | |
|
|
| T |
8654709 |
gcagctattgcatatggccttgacaagcgaagtaactatgatggtaaacggaatattttggtatttgatcttggtggtggtacttttgatgtgtctatac |
8654610 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
|||| |||| | |||||| ||||| || ||||| ||| |||||||||| ||| | |||||||| |||||||||||||||||| || ||||||||||||| |
|
|
| T |
8654609 |
tcacaattaagggtgatgtctttgacgtaaaagccactgctggaaacacgcacctagggggagaagactttgataacagaatggtgtactactttgtaga |
8654510 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
||| || || | |||||| || ||||| |||| |
|
|
| T |
8654509 |
ggagttcaaaaagaagaataaagtggaaatta |
8654478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 62 - 393
Target Start/End: Original strand, 8636152 - 8636483
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||| ||||||||||||||| | ||||| ||| |||| | ||||||||||||||||| || |||||||| || | ||||| ||||| || ||||| |
|
|
| T |
8636152 |
tgtgcccgcttatttcaatgattctcagcgtaaatccaccaaagatgctggtgccattgccggccttaatgtaattcggataatcaatgaaccaactgct |
8636251 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
|||||| |||| ||||||||| | |||||||||| |||| | ||||| || ||||| || ||||||||||||||||| || || || |||||| | | |
|
|
| T |
8636252 |
gcagcttttgcgtatggacttcaaaagagaggtaactgtgttaaagagagaaacattttcgtatttgatcttggtggtggtacattcgacgtgtctatac |
8636351 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
||| |||| || ||| || |||||||||||||| ||| | ||| |||| ||| | || |||||||||||||||||||||||| || | || |||||||| |
|
|
| T |
8636352 |
tcaaaattaaaggtgaagtctttgaagttaaagccactgccggagacacacaccttggaggagaggactttgataacagaatggtggaatattttgtaga |
8636451 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
|||| | |||| ||||||||| || ||||||| |
|
|
| T |
8636452 |
ggaaatcaagaggaagaacaaggtagacatta |
8636483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 62 - 394
Target Start/End: Complemental strand, 6789871 - 6789539
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||||||||||||||||||| | || || ||||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||| || || || |
|
|
| T |
6789871 |
tgtgcctgcttatttcaatgattctcaacggaaagccactttagatgctggtgccattgctggtcttaatgttatacgaataatcaatgaaccaacagct |
6789772 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
|| ||| |||||||||| ||||| |||||| || | | || || | |||||||| ||||| || ||||||||||| ||||| ||||||||| | |
|
|
| T |
6789771 |
gctgctcttgcatatggccttgataagagaactaattacggtggagaaaaaaatattttcgtcttcgaccttggtggtggcactttcgatgtgtctatct |
6789672 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
| || || | |||| | || || ||||||| || || ||||||||||||| |||| |||||||||||||||||| || || | |||||||||| ||| |
|
|
| T |
6789671 |
taacaatcaaagataaggtcttccaagttaaggccaccggtggaaacactcacctcggaggagaggactttgataaccgattggtaaactactttgcaga |
6789572 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacattac |
394 |
Q |
| |
|
||| ||||||| ||||||||| ||||| ||||| |
|
|
| T |
6789571 |
ggagtttaagaggaagaacaaagtggatattac |
6789539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 63 - 393
Target Start/End: Original strand, 27830685 - 27831015
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
||||| |||||||||||||| | || |||||||||||| | ||| | |||||||||||||| |||||||||||| | ||||| | ||||| ||||| | |
|
|
| T |
27830685 |
gtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggccttaatgttatgcggataataagcgagcctactgctg |
27830784 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttct |
262 |
Q |
| |
|
|||||||||||||||| ||||| | | || | | | || || ||||||||||||| ||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
27830785 |
cagctattgcatatggccttgacacgggaacaaaatatactggagaacggaatatttttgtgtttgaccttggtggtgggacttttgatgtgtctcttgt |
27830884 |
T |
|
| Q |
263 |
caccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagag |
362 |
Q |
| |
|
|| |||| ||| | || || ||||||| |||||| |||||||||||||| | || ||||||||||||||||| || ||| ||||||| ||||| ||| |
|
|
| T |
27830885 |
tacaattaaggataaggtcttccaagttaaggcaactgctggaaacactcaccttggtggagaggactttgataataggatggtgaactattttgtggag |
27830984 |
T |
|
| Q |
363 |
gaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
| || |||| |||||| | |||||||||| |
|
|
| T |
27830985 |
gtgttcaagaagaagaaaagagtggacatta |
27831015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 62 - 393
Target Start/End: Complemental strand, 1301823 - 1301488
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagccca----c |
157 |
Q |
| |
|
||||||||| ||||||||||| | |||||||||||||| || ||||| ||||| |||||||| |||||||| || ||||||||||| || | | |
|
|
| T |
1301823 |
tgtgcctgcacatttcaatgattctcagcgaaaagccaccatagatgccggtgcaattgctggccttaatgtcattcagataattaatgaacctagctac |
1301724 |
T |
|
| Q |
158 |
tgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtct |
257 |
Q |
| |
|
||| ||||||||||| ||||| |||| |||||| || ||||||| | | |||||||||| |||||||| ||||| ||||| ||||||||||||||| |
|
|
| T |
1301723 |
tgctgcagctattgcgtatggttttgacaagagaagtgactgtgatggtaaacggaatattttggtctttgaccttggcggtggtacttttgatgtgtct |
1301624 |
T |
|
| Q |
258 |
cttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttg |
357 |
Q |
| |
|
| || ||||| | | ||||| |||||||| ||||| ||| |||||| |||||| | || ||||||||||||||||| |||||| ||| |||||||| |
|
|
| T |
1301623 |
atccttaccatcaagggcgatgtctttgaagtaaaagccactggtggaaatactcaccttggaggagaggactttgataatagaatggtgagctactttg |
1301524 |
T |
|
| Q |
358 |
tagaggaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
||||||| || | | |||||| || |||||||||| |
|
|
| T |
1301523 |
tagaggagttcagaaagaagaataaagtggacatta |
1301488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 393
Target Start/End: Complemental strand, 3147627 - 3147292
Alignment:
| Q |
66 |
cctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcag |
165 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| || || |||||||||| |||||||| |||||| ||||| | ||||| ||||| || ||||| |||| |
|
|
| T |
3147627 |
cctgcttatttcaatgatgctcagcggaaagcgacaatagatgctggtgttattgctggccttaatattatgcggataatcaatgaacctactgctgcag |
3147528 |
T |
|
| Q |
166 |
ctattgcatatggacttgagaagagaggta--ggtgtgatgctg-agagg-----aatatttttgtctttgatcttggtggtgggacttttgatgtgtct |
257 |
Q |
| |
|
||||||| |||||||| || |||||| || |||| || || ||||| ||||||||| ||||||| | |||||||||||||||||||||||| |
|
|
| T |
3147527 |
ctattgcgtatggactggacaagagaactaattgtgtaattgtgtagaggagcgtaatatttttatctttgacttgggtggtgggacttttgatgtgtct |
3147428 |
T |
|
| Q |
258 |
cttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttg |
357 |
Q |
| |
|
||||| || |||| ||| | || ||| ||||||| || | | |||||||| ||| | |||||||||||||||||||| || ||| |||||||||||| |
|
|
| T |
3147427 |
cttcttacaattaaggataaggtctttcaagttaaggccatcgcaggaaacacccaccttgggggagaggactttgataataggatggtgaactactttg |
3147328 |
T |
|
| Q |
358 |
tagaggaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
| ||| ||||||| ||||||||| || ||||||| |
|
|
| T |
3147327 |
cacgggagtttaagaagaagaacaaggtagacatta |
3147292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 382
Target Start/End: Complemental strand, 8559688 - 8559372
Alignment:
| Q |
66 |
cctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcag |
165 |
Q |
| |
|
||||||||||| |||||| | || ||| |||||| | ||||| |||| ||||||||||||||||| ||| ||||| ||||| || |||||||| | |
|
|
| T |
8559688 |
cctgcttattttaatgattctcaaagaagagccaccaaagatgcaggtgaaattgctggtcttaatgtaatgcagataatcaatgaaccaactgcagctg |
8559589 |
T |
|
| Q |
166 |
ctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcac |
265 |
Q |
| |
|
|| |||||||||||||| | |||||| || |||| | ||||| |||||||| |||||||||| |||||||| ||||||||||| ||||||||||| |
|
|
| T |
8559588 |
ctcttgcatatggacttcaaaagagatctaattgtgttaaagagagaaatattttcatctttgatctcggtggtggaacttttgatgtttctcttctcac |
8559489 |
T |
|
| Q |
266 |
cattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagaggaa |
365 |
Q |
| |
|
|||| || || | |||||||| || || ||||| ||| |||| ||| |||| |||||||||||||||||||||||| |||| |||||||| | || |
|
|
| T |
8559488 |
aattaagaataatctctttgaagtcaaggccacttccggagacacacacctcggaggagaggactttgataacagaatggtgaaacactttgtaaaagag |
8559389 |
T |
|
| Q |
366 |
tttaagacgaagaacaa |
382 |
Q |
| |
|
||| ||| ||||||||| |
|
|
| T |
8559388 |
tttgagaggaagaacaa |
8559372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 66 - 364
Target Start/End: Complemental strand, 17260596 - 17260298
Alignment:
| Q |
66 |
cctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcag |
165 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||| || |||||||||| |||||||| ||| ||||| ||| |||||||||| || | ||| |||| |
|
|
| T |
17260596 |
cctgcttatttcaatgattctcagcgaaaagccaccatagatgctggtgttattgctggcctttatgttttgaagttaattaatgaacctattgctgcag |
17260497 |
T |
|
| Q |
166 |
ctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcac |
265 |
Q |
| |
|
||||||||||||| |||| |||||| || |||| | | ||||||||||||||||||| |||||||| |||||||||||||||||||| | || |
|
|
| T |
17260496 |
ctattgcatatggccttgtcaagagaactaattgtgtttaagtacggaatatttttgtctttgaccttggtggggggacttttgatgtgtctctcgttac |
17260397 |
T |
|
| Q |
266 |
cattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagagga |
364 |
Q |
| |
|
|||| ||| | || || |||||||| || || |||| ||||||| | ||||| |||||||||||||| |||||| || |||| ||||||||||| |
|
|
| T |
17260396 |
aattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttgataatagaatggtgtactattttgtagagga |
17260298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 69 - 365
Target Start/End: Complemental strand, 17268291 - 17267995
Alignment:
| Q |
69 |
gcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagcta |
168 |
Q |
| |
|
||||| ||||| ||| | |||||||||||||| || |||||||||| ||||||||| |||||||| ||| |||| ||||| || ||||| ||||||| |
|
|
| T |
17268291 |
gcttacttcaacgattctcagcgaaaagccaccatagatgctggtgtcattgctggccttaatgtattgaaggtaatcaatgaaccaactgctgcagcta |
17268192 |
T |
|
| Q |
169 |
ttgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccat |
268 |
Q |
| |
|
|||||||||| |||| |||||| || |||| || || ||||||||||||||||||| ||||||||||||||||||||||||||||| | || || |
|
|
| T |
17268191 |
ttgcatatggccttggcaagagaactaactgtgttgaagaacggaatatttttgtctttgaccttggtggtgggacttttgatgtgtctctcgttacaat |
17268092 |
T |
|
| Q |
269 |
tagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagaggaa |
365 |
Q |
| |
|
|| ||| | || || |||||||| || || |||| ||||||| | ||||| |||||||||||||| |||||| | |||| ||||| |||||| |
|
|
| T |
17268091 |
taaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttgataatagaatggtatactattttgttgaggaa |
17267995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 270
Target Start/End: Original strand, 8382686 - 8382893
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
|||||||| |||||||||||| | || || |||||||| | ||||||||||| |||||||| || ||||| ||| | ||||| |||||||| ||||| | |
|
|
| T |
8382686 |
gtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcctcaatgtaatgcggataatcaatgagccaactgccg |
8382785 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttct |
262 |
Q |
| |
|
| ||| |||||||||| ||| ||||||||| || ||| || ||||| |||||||| ||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
8382786 |
ctgctcttgcatatggccttcagaagagagctaattgtcttgaagagagaaatattttcatctttgatcttggtggtggaacttttgatgtgtctctcct |
8382885 |
T |
|
| Q |
263 |
caccatta |
270 |
Q |
| |
|
||| |||| |
|
|
| T |
8382886 |
cacaatta |
8382893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 394
Target Start/End: Complemental strand, 8647236 - 8646904
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
||||||||| || ||||||||| ||||||||||||||||| ||||| || ||||||||||| |||||| | || | ||||| ||||| || || || |
|
|
| T |
8647236 |
tgtgcctgcatacttcaatgattatcagcgaaaagccactatagatgccggggccattgctggccttaatatcatccggataatcaatgaaccaacagct |
8647137 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
|| ||| | |||||||| ||||| |||||| | |||| || || | ||||| || |||| || ||||||||||| ||||||||||||||||| | |
|
|
| T |
8647136 |
gctgctctcgcatatggccttgacaagagaacaaattgtgctgaagaacgaaatatattcatcttcgaccttggtggtggaacttttgatgtgtctctcc |
8647037 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
| || |||| ||| | || ||| | |||||||| || |||||||||||||| |||| |||||||||||||||| |||||| || || |||||| | | |
|
|
| T |
8647036 |
ttacaattaaggataaggtctttcatgttaaagccaccgctggaaacactcacctcggaggagaggactttgatagtagaatggtggaccactttgcaca |
8646937 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacattac |
394 |
Q |
| |
|
|||||||| | ||||||||| ||||||||||| |
|
|
| T |
8646936 |
agaatttaacaagaagaacaaggtggacattac |
8646904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 66 - 265
Target Start/End: Complemental strand, 8570666 - 8570467
Alignment:
| Q |
66 |
cctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcag |
165 |
Q |
| |
|
||||||||||| |||||| |||| |||| |||||||| ||||| |||| ||||||||||| ||||| ||| | ||||| ||||| || ||||| |||| |
|
|
| T |
8570666 |
cctgcttattttaatgattcacaacgaagagccactaaagatgcaggtgaaattgctggtctcaatgtaatgcggataatcaatgaaccgactgcggcag |
8570567 |
T |
|
| Q |
166 |
ctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcac |
265 |
Q |
| |
|
|| |||||||||| ||| | ||||||| || | || || | |||| ||||||||| ||||||| ||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
8570566 |
ctcttgcatatggccttcaaaagagagctaattttgttgataagagaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcac |
8570467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 66 - 265
Target Start/End: Complemental strand, 8582055 - 8581856
Alignment:
| Q |
66 |
cctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcag |
165 |
Q |
| |
|
||||||||||| |||||| |||| |||| |||||||| ||||| |||| ||||| ||||| ||||| ||| | ||||| ||||| || ||||| |||| |
|
|
| T |
8582055 |
cctgcttattttaatgattcacaacgaagagccactaaagatgcaggtgaaattgcaggtctcaatgtaatgcggataatcaatgaaccgactgcggcag |
8581956 |
T |
|
| Q |
166 |
ctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcac |
265 |
Q |
| |
|
|| |||||||||| ||| | ||||||| || |||| || | |||| ||||||||| ||||||| ||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
8581955 |
ctcttgcatatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggaggtggaacttttgatgtgtctattctcac |
8581856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 62 - 265
Target Start/End: Complemental strand, 8576685 - 8576482
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
||||||||||||||| |||||| | || |||| |||||||| ||||| ||||| ||||||||||| ||||| ||| ||||| ||||| || ||||| |
|
|
| T |
8576685 |
tgtgcctgcttattttaatgattcccaacgaagagccactaaagatgcaggtgcaattgctggtctcaatgtcatgcagataatcaatgaaccgactgcg |
8576586 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
|||||| |||| ||||| ||| | ||||||| || |||| || | | || ||||||||| ||||||| ||||| ||||| ||||||||||||||| ||| |
|
|
| T |
8576585 |
gcagctcttgcgtatggccttcaaaagagagctaattgtgttgataaaagaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattc |
8576486 |
T |
|
| Q |
262 |
tcac |
265 |
Q |
| |
|
|||| |
|
|
| T |
8576485 |
tcac |
8576482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 8610276 - 8609994
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
||||||||||||||| |||||| | ||||| |||||||| | |||||||||| |||| |||| |||||||| || | || || ||||| || || || |
|
|
| T |
8610276 |
tgtgcctgcttattttaatgattctcagcggaaagccacaaaagatgctggtgtcatttctggccttaatgtaatccggattatcaatgaaccaacggct |
8610177 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
|| ||| |||||||||| ||| ||||||||| || |||| | | || ||||||||| ||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
8610176 |
gcggctcttgcatatggtcttcagaagagagctaattgtgtggaaaatagaaatatttttatctttgatcttggtggtgggactttcgatgtgtctgttc |
8610077 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatg |
344 |
Q |
| |
|
|||| |||| | | ||| || || || || || ||| ||||| | |||||| | || ||||||||||||||| |||||||| |
|
|
| T |
8610076 |
tcacaattaaaaacaatgctttcgatgtcaaggctactgctggagatactcaccttggaggagaggactttgatcacagaatg |
8609994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 448
Target Start/End: Complemental strand, 8545987 - 8545606
Alignment:
| Q |
66 |
cctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcag |
165 |
Q |
| |
|
||||||||||| |||||| |||| | || | |||| | ||||| |||| ||||| ||||| ||||| ||| | ||||| ||||| || ||||| || | |
|
|
| T |
8545987 |
cctgcttattttaatgattcacaacaaagatccacaaaagatgcaggtgaaattgccggtctaaatgtcatgcggataatcaatgaaccgactgcggcgg |
8545888 |
T |
|
| Q |
166 |
ctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcac |
265 |
Q |
| |
|
|| |||||||||| ||| | ||||||| || || | || | |||| ||||||||| ||||||| ||||| ||||| ||||||||||||||| |||| || |
|
|
| T |
8545887 |
ctcttgcatatggccttcaaaagagagctaattg-gttgataagagaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattcttac |
8545789 |
T |
|
| Q |
266 |
cattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagaggaa |
365 |
Q |
| |
|
|||| | || | || ||||| || || || ||| ||||| ||||| || | || || || |||||||||||||||||| |||| |||||||| |||| |
|
|
| T |
8545788 |
aattaaaaataaggtctttgatgtcaaggccactgctggagacacttacctaggcggtgaagactttgataacagaatggtgaattactttgtgaaggag |
8545689 |
T |
|
| Q |
366 |
tttaagacgaagaacaacgtggacattacccgcgatccaagagctttgagacagttgagaactgcatgtgaaaaggcaaaaag |
448 |
Q |
| |
|
|| |||| ||||||||| | ||| |||| || | ||| ||| ||||| |||||||||||| ||||| ||||||||||| |
|
|
| T |
8545688 |
ttcaagaggaagaacaatgaggatattagtcggaacccagaagccttgaggaggttgagaactgcctgtgagaaggcaaaaag |
8545606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 8538391 - 8538198
Alignment:
| Q |
66 |
cctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcag |
165 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||||| | |||||||||| ||||||||| || ||||| ||| | ||||| ||||| || || || || | |
|
|
| T |
8538391 |
cctgcttatttcaatgattcacagcgaagagccaccaaagatgctggtgtcattgctggcctcaatgtaatgcggataatcaatgaacctacagctgctg |
8538292 |
T |
|
| Q |
166 |
ctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctct |
259 |
Q |
| |
|
|| ||||||| || ||| | ||||||| || |||| || ||||| || |||| ||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
8538291 |
ctcttgcatacggccttcaaaagagagctaattgtgttgaagagagaaaagttttcatctttgatcttggtggtggaacttttgatgtatctct |
8538198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 223 - 357
Target Start/End: Original strand, 29581811 - 29581945
Alignment:
| Q |
223 |
tctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcggggg |
322 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||||| || || ||| |||| | |||||| | || || |
|
|
| T |
29581811 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaggatgataagtttgaagtgaaggccactgctggcgatactcacctaggagg |
29581910 |
T |
|
| Q |
323 |
agaggactttgataacagaatgttgaactactttg |
357 |
Q |
| |
|
|||||||||||||||| ||||| |||| ||||||| |
|
|
| T |
29581911 |
agaggactttgataaccgaatggtgaattactttg |
29581945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 392
Target Start/End: Original strand, 7877706 - 7877872
Alignment:
| Q |
226 |
ttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggaga |
325 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||||| | | ||||||| ||||| || | ||| ||| | ||| | |||||| | || ||||| |
|
|
| T |
7877706 |
ttgatcttggtggtggcactttcgatgtgtctcttctcacactaaaagatgatagctttgatgtaatagctactgccggagatactcacctaggtggaga |
7877805 |
T |
|
| Q |
326 |
ggactttgataacagaatgttgaactactttgtagaggaatttaagacgaagaacaacgtggacatt |
392 |
Q |
| |
|
||||||||||||||||||||||||| | || || ||| ||||||| |||||| || ||||||||| |
|
|
| T |
7877806 |
ggactttgataacagaatgttgaaccatttagtgatggagtttaagaggaagaataaagtggacatt |
7877872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 8590836 - 8590715
Alignment:
| Q |
223 |
tctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcggggg |
322 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| | | || |||| ||||| || ||||| ||||| ||| | || ||| | || || |
|
|
| T |
8590836 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
8590737 |
T |
|
| Q |
323 |
agaggactttgataacagaatg |
344 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
8590736 |
agaggactttgataacagaatg |
8590715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 8671440 - 8671568
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
||||| ||||| ||||||||| | ||||||| ||||| || ||||||||| | |||||||| |||||||| || | ||||| ||||| || ||||| | |
|
|
| T |
8671440 |
gtgccagcttacttcaatgattctcagcgaacggccaccattgatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgctg |
8671539 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagaga |
191 |
Q |
| |
|
|||||||||||||||| ||||| |||||| |
|
|
| T |
8671540 |
cagctattgcatatggccttgacaagaga |
8671568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 63 - 393
Target Start/End: Original strand, 29577479 - 29577812
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
||||| ||||||||||||||| | |||||||||||||| | ||||| || |||||||| || ||||| ||| | ||||| ||||| || ||||| | |
|
|
| T |
29577479 |
gtgccagcttatttcaatgattctcagcgaaaagccaccaaagatgccggcattattgctggcctcaatgtaatgcggataatcaatgaaccaactgctg |
29577578 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctg---agaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctct |
259 |
Q |
| |
|
| || ||||||||||| || | |||||||||| | || || || || | ||| | || ||||||||||||||||||| || |||||||||||||| |
|
|
| T |
29577579 |
ctgcacttgcatatggaattcaaaagagaggtaattttgttgttggaaagcgaaatgtattcatctttgatcttggtggtggcacctttgatgtgtctct |
29577678 |
T |
|
| Q |
260 |
tctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgta |
359 |
Q |
| |
|
|||||| ||| |||||| |||||||| || || ||| |||| | |||||| | || ||||||||||| ||||| | |||| ||| | ||||||| |
|
|
| T |
29577679 |
tctcacacttaaggatgatagttttgaagtaaaggccactgctggtgatactcacctaggaggagaggacttcgataataaaatggtgagccactttgtg |
29577778 |
T |
|
| Q |
360 |
gaggaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
| || || |||| ||||||||| |||||||||| |
|
|
| T |
29577779 |
aatgagttgaagaggaagaacaatgtggacatta |
29577812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 442
Target Start/End: Complemental strand, 8616764 - 8616660
Alignment:
| Q |
338 |
cagaatgttgaactactttgtagaggaatttaagacgaagaacaacgtggacattacccgcgatccaagagctttgagacagttgagaactgcatgtgaa |
437 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||| ||||||||| ||||| ||||| | | |||||| | ||||| | ||||| ||||||||| ||| |
|
|
| T |
8616764 |
cagaatgttgaactactttgttgaggattttaagaggaagaacaatgtggatattactaggaacccaagatcgttgaggcggttgaaaactgcatgcgaa |
8616665 |
T |
|
| Q |
438 |
aaggc |
442 |
Q |
| |
|
||||| |
|
|
| T |
8616664 |
aaggc |
8616660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 7877542 - 7877671
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||| ||||||||||||||| | || ||||||||||| | ||||||||||| |||| || || ||||||||| | ||||||||||| || ||||| |
|
|
| T |
7877542 |
tgtgccggcttatttcaatgattctcaacgaaaagccacaaaagatgctggtgcagttgccggcctcaatgttatgcggataattaatgaaccaactgct |
7877641 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagaga |
191 |
Q |
| |
|
|| || |||||||||| ||| | |||||| |
|
|
| T |
7877642 |
gctgcccttgcatatggccttcaaaagaga |
7877671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 8103022 - 8102916
Alignment:
| Q |
66 |
cctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcag |
165 |
Q |
| |
|
|||||||| ||||||||| | ||||| |||| |||| |||||||||| || |||||| | |||||| ||||||| ||||||||||| ||||| || | |
|
|
| T |
8103022 |
cctgcttacttcaatgattctcagcgtcaagcaactaaagatgctggtgttatcgctggtttaaatgttttgagaattattaatgagccaactgctgctg |
8102923 |
T |
|
| Q |
166 |
ctattgc |
172 |
Q |
| |
|
||||||| |
|
|
| T |
8102922 |
ctattgc |
8102916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 8017229 - 8017344
Alignment:
| Q |
69 |
gcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagcta |
168 |
Q |
| |
|
||||| ||||||||| | ||||| ||||||| | |||||| |||| |||||| || || |||||| ||||||| || || ||||| || || ||||||| |
|
|
| T |
8017229 |
gcttacttcaatgattcgcagcgtcaagccacaaaggatgccggtgtcattgcaggactcaatgttttgagaattatcaacgagccaacagctgcagcta |
8017328 |
T |
|
| Q |
169 |
ttgcatatggacttga |
184 |
Q |
| |
|
|||| || |||||||| |
|
|
| T |
8017329 |
ttgcgtacggacttga |
8017344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 29581651 - 29581688
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccac |
100 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
29581651 |
gtgcctgcttatttcaatgattctcagcgaaaagccac |
29581688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 39985963 - 39985878
Alignment:
| Q |
104 |
ggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaaga |
189 |
Q |
| |
|
||||||||| | ||||| ||||||||||| ||| |||| || |||||||||||||| || || ||||| ||||| ||||| |||| |
|
|
| T |
39985963 |
ggatgctggagttattgccggtcttaatgtcatgcgaattatcaatgagcccactgctgctgccattgcttatggtcttgacaaga |
39985878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 23 - 357
Target Start/End: Original strand, 34466567 - 34466897
Alignment:
| Q |
23 |
tatttggaatccccagttaaaaatgcagttgtcactgtatgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgct |
122 |
Q |
| |
|
||||||||||| ||| |||| ||||||||| |||| |||||||||||||| |||||| | ||||||||||| ||| ||||||||||| | |||||| |
|
|
| T |
34466567 |
tatttggaatcaccaattaagaatgcagttatcac----cgtgcctgcttattttaatgattctcagcgaaaagctactgtggatgctggtactattgct |
34466662 |
T |
|
| Q |
123 |
ggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttg |
222 |
Q |
| |
|
|| ||||||||| || |||||| ||||| |||||||| ||||||||||||||||||||||| ||||||| | | || | || | |||||||| | |
|
|
| T |
34466663 |
ggccttaatgttttgcaaataatcaatgaacccactgctgcagctattgcatatggacttgacaagagagctgactttgtggaagaaggaaatattttcg |
34466762 |
T |
|
| Q |
223 |
tctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcggggg |
322 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| || || |||| ||| |||| ||||||||||| || |||||||| ||||||||| |||| | |
|
|
| T |
34466763 |
tctttgaccttggtggtgggacttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctggtaacactcacctcggacg |
34466862 |
T |
|
| Q |
323 |
agaggactttgataacagaatgttgaactactttg |
357 |
Q |
| |
|
||||||||||||||| |||||| |||| |||||| |
|
|
| T |
34466863 |
agaggactttgataatagaatggcgaaccactttg |
34466897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 62 - 393
Target Start/End: Original strand, 4678367 - 4678698
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
||||||||| || ||||||||| | || |||||||| || || |||||||||||||||||||| |||||||| || |||||| || || || |||| |
|
|
| T |
4678367 |
tgtgcctgcatacttcaatgattctcaacgaaaagctaccatagatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgtt |
4678466 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttc |
261 |
Q |
| |
|
||||||||||||||||| |||| |||||| || ||||| | | | ||||| ||||||||||| ||||||||||| ||||||||||||||| | | |
|
|
| T |
4678467 |
gcagctattgcatatggttttgacaagagaagtgaaagtgattgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatcc |
4678566 |
T |
|
| Q |
262 |
tcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
| | || | | || ||| |||||||| ||||| ||| |||||||||||||| | || |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4678567 |
ttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacactcacctaggtggagaggactttgataacagaatggtgaactactttgtaga |
4678666 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
||| || || | |||||| || |||||||||| |
|
|
| T |
4678667 |
ggagttcaaaaagaagaataatgtggacatta |
4678698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 63 - 394
Target Start/End: Complemental strand, 15595399 - 15595061
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
|||||||||||| |||||||| | || |||||||||||||| ||||| |||||||||||||| ||||||||||| | |||| ||||| || || || | |
|
|
| T |
15595399 |
gtgcctgcttatctcaatgattctcaacgaaaagccactatagatgcaggtgccattgctggccttaatgttatacgggtaatcaatgaaccgacagctg |
15595300 |
T |
|
| Q |
163 |
-------cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgt |
255 |
Q |
| |
|
|||||||||||||||| ||||| ||||| || |||| || || || ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15595299 |
acagctgcagctattgcatatggccttgacaagaggattaactgtgttggagaaagaaatatttttgtctttgatcttggtggtggcacttttgatgtgt |
15595200 |
T |
|
| Q |
256 |
ctcttctcaccattagagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactt |
355 |
Q |
| |
|
|| | || || |||| || | || || ||||||| || || |||||||||||| | || |||||||||||||||||||||||| | |||||||| |
|
|
| T |
15595199 |
ctatcctaacaattaaggacaaggtcttccaagttaaggccacaggcggaaacactcaccttggaggagaggactttgataacagaatggtcaactactt |
15595100 |
T |
|
| Q |
356 |
tgtagaggaatttaagacgaagaacaacgtggacattac |
394 |
Q |
| |
|
|| ||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
15595099 |
tgcgcaggaattcaagacgaagaacaaagtggatattac |
15595061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 259
Target Start/End: Complemental strand, 43745206 - 43745011
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||| ||||||||||||||| ||||| |||||||||| |||||||||||||||||||| ||| ||||||||| ||||| ||||| |||||||| |
|
|
| T |
43745206 |
tgtgccggcttatttcaatgattatcagcggaaagccacta--gatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgct |
43745109 |
T |
|
| Q |
162 |
gcagctattgcatatggacttgagaagagaggtaggtgtgatgctgag--aggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctct |
259 |
Q |
| |
|
||||||||||||||||| || || |||||| || | || ||| ||| || |||||||| ||||||| || |||||||||||||||||||||||||| |
|
|
| T |
43745108 |
gcagctattgcatatggtctggaaaagagaactaactctg-tgc-gaggaagaaatattttcatctttgacctgggtggtgggacttttgatgtgtctct |
43745011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 300 - 394
Target Start/End: Complemental strand, 43744937 - 43744843
Alignment:
| Q |
300 |
tctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagaggaatttaagacgaagaacaacgtggacattac |
394 |
Q |
| |
|
||||||||||||||| |||| |||||||| |||||||| || ||| |||||||||| | |||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
43744937 |
tctggaaacactcacctcggaggagaggattttgataataggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattac |
43744843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 63 - 393
Target Start/End: Complemental strand, 12528862 - 12528532
Alignment:
| Q |
63 |
gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag |
162 |
Q |
| |
|
||||| || |||||||||||| | |||||| |||||| | ||||||||||| ||||||||| || ||||| || | ||||| || || || ||||||| |
|
|
| T |
12528862 |
gtgccagcgtatttcaatgattcgcagcgacgagccaccaaggatgctggtgtcattgctggcctcaatgtaatacggataatcaacgaaccaactgcag |
12528763 |
T |
|
| Q |
163 |
cagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttct |
262 |
Q |
| |
|
| ||| |||||||||| || | ||||||| || ||| || ||||| | |||||| | ||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
12528762 |
ctgctcttgcatatggcattcaaaagagagctaattgtcttgaagagagaaggatttttatttttgaccttggcggtggaacttttgatgtgtctcttct |
12528663 |
T |
|
| Q |
263 |
caccattagag-atgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtaga |
361 |
Q |
| |
|
| || || || || |||| || ||||| || || ||| | ||| |||||||| | || ||||||||||||||||| ||||| |||| ||||||| | |
|
|
| T |
12528662 |
ta-cagtaaagaataatgtcttcgaagtcaaggccactgccggagacactcaccttggaggagaggactttgataatcgaatggtgaatcactttgtgaa |
12528564 |
T |
|
| Q |
362 |
ggaatttaagacgaagaacaacgtggacatta |
393 |
Q |
| |
|
|| ||||||| ||||||||| || ||||||| |
|
|
| T |
12528563 |
agagtttaagaggaagaacaaagttgacatta |
12528532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 54; Significance: 8e-22; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 301 - 394
Target Start/End: Complemental strand, 28220038 - 28219945
Alignment:
| Q |
301 |
ctggaaacactcacatcgggggagaggactttgataacagaatgttgaactactttgtagaggaatttaagacgaagaacaacgtggacattac |
394 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| || ||| |||||||||| | |||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
28220038 |
ctggaaacactcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattac |
28219945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 28220310 - 28220193
Alignment:
| Q |
62 |
tgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgca |
161 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||| || ||||| ||| ||||||||||||| |||||| | || ||| | ||||| |||||||| |
|
|
| T |
28220310 |
tgtgcctgcttatttcaatgattatcagcggaaagccaccatagatgcaggtaccattgctggtctaaatgttctaaggatagtcaatgaacccactgct |
28220211 |
T |
|
| Q |
162 |
gcagctattgcatatgga |
179 |
Q |
| |
|
|| ||||||||||||||| |
|
|
| T |
28220210 |
gctgctattgcatatgga |
28220193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 28220159 - 28220113
Alignment:
| Q |
213 |
aatatttttgtctttgatcttggtggtgggacttttgatgtgtctct |
259 |
Q |
| |
|
|||||||| ||||||| || |||||||||||||||||||||||||| |
|
|
| T |
28220159 |
aatattttcatctttgacctgggtggtgggacttttgatgtgtctct |
28220113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 353
Target Start/End: Complemental strand, 28910932 - 28910650
Alignment:
| Q |
71 |
ttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctatt |
170 |
Q |
| |
|
||||||||||||| | || | |||||||| || |||||||||||||||| | |||||||||||| | ||||| ||||||| |||||| | ||||||| |
|
|
| T |
28910932 |
ttatttcaatgattcttagaggaaagccaccatagatgctggtgccattgtcaggcttaatgttatgcggataatcaatgagctcactgctgtagctatt |
28910833 |
T |
|
| Q |
171 |
gcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccatta |
270 |
Q |
| |
|
||||||| || || ||||||| | ||||| || || | |||| ||| |||| || || ||| |||||||||||||||| ||||| || || ||| |
|
|
| T |
28910832 |
tcatatggcctcgacaagagagctgagtgtgctggagaacgaaatactttcatcttcgacctgggtagtgggacttttgatgtttctctccttacaattc |
28910733 |
T |
|
| Q |
271 |
gagatgatgtgtttgaagttaaagcaacttctggaaacactcacatcgggggagaggactttgataacagaatgttgaactac |
353 |
Q |
| |
|
||| | || || ||||||| || || |||||||||||||| |||||| |||||| ||||||| || ||| |||||||| |
|
|
| T |
28910732 |
aggataaggtcttccaagttaaggccaccgctggaaacactcacctcggggtcgaggacattgataataggatggtgaactac |
28910650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 11276270 - 11276197
Alignment:
| Q |
105 |
gatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatgg |
178 |
Q |
| |
|
||||| ||||| |||||||| || || |||||| ||||||| |||||||| |||||||| || ||||||||||| |
|
|
| T |
11276270 |
gatgcgggtgctattgctggcctaaacgttatgcgaataataaatgagcctactgcagctgcaattgcatatgg |
11276197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 11156574 - 11156507
Alignment:
| Q |
117 |
attgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttga |
184 |
Q |
| |
|
|||||||| || ||||||||| ||||||| |||||||| ||||||| || ||||||||||| ||||| |
|
|
| T |
11156574 |
attgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttga |
11156507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 11170886 - 11170807
Alignment:
| Q |
105 |
gatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttga |
184 |
Q |
| |
|
||||| ||||| |||||||| || |||||| || ||||| | |||||||| |||||||| || ||||||||||| ||||| |
|
|
| T |
11170886 |
gatgcgggtgctattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttga |
11170807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 11197027 - 11196960
Alignment:
| Q |
117 |
attgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttga |
184 |
Q |
| |
|
|||||||| || ||||||||| ||||||| |||||||| ||||||| || ||||||||||| ||||| |
|
|
| T |
11197027 |
attgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttga |
11196960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 11200204 - 11200125
Alignment:
| Q |
105 |
gatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttga |
184 |
Q |
| |
|
||||| ||||| |||||||| || |||||| || ||||||| |||||||| ||||||| || ||||||||||| ||||| |
|
|
| T |
11200204 |
gatgcgggtgctattgctggcctcaatgttttgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttga |
11200125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 11209708 - 11209635
Alignment:
| Q |
105 |
gatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatgg |
178 |
Q |
| |
|
||||| ||||| |||||||| || |||||| || ||||| | |||||||| |||||||| || ||||||||||| |
|
|
| T |
11209708 |
gatgcgggtgctattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatgg |
11209635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 1201 - 1128
Alignment:
| Q |
105 |
gatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatgg |
178 |
Q |
| |
|
||||| ||||| |||||||| || |||||| || ||||| | |||||||| |||||||| || ||||||||||| |
|
|
| T |
1201 |
gatgcaggtgctattgctggcctcaatgttttgggaatactcaatgagcctactgcagctgcaattgcatatgg |
1128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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