View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12882_low_45 (Length: 274)

Name: NF12882_low_45
Description: NF12882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12882_low_45
NF12882_low_45
[»] chr7 (16 HSPs)
chr7 (19-259)||(44238929-44239168)
chr7 (95-132)||(1417221-1417258)
chr7 (95-132)||(5006585-5006622)
chr7 (95-132)||(39591543-39591580)
chr7 (93-132)||(17989099-17989138)
chr7 (98-132)||(12835013-12835047)
chr7 (98-132)||(30456526-30456560)
chr7 (95-132)||(1418388-1418425)
chr7 (95-132)||(9527166-9527203)
chr7 (99-132)||(23918918-23918951)
chr7 (95-132)||(28178926-28178963)
chr7 (100-133)||(30160965-30160998)
chr7 (99-132)||(31002722-31002755)
chr7 (95-132)||(35536064-35536101)
chr7 (95-132)||(45777247-45777284)
chr7 (95-132)||(46825055-46825092)
[»] chr5 (17 HSPs)
chr5 (93-132)||(36639477-36639516)
chr5 (95-132)||(14295463-14295500)
chr5 (95-132)||(28586842-28586879)
chr5 (95-131)||(10303758-10303794)
chr5 (93-132)||(583849-583888)
chr5 (96-130)||(985591-985625)
chr5 (93-127)||(11615463-11615497)
chr5 (95-133)||(12242763-12242801)
chr5 (95-129)||(29117009-29117043)
chr5 (94-132)||(32194157-32194195)
chr5 (95-132)||(12595816-12595853)
chr5 (95-132)||(35135738-35135775)
chr5 (95-132)||(37063150-37063187)
chr5 (96-136)||(1019516-1019556)
chr5 (95-131)||(10363707-10363743)
chr5 (93-129)||(11835232-11835268)
chr5 (95-127)||(35095864-35095896)
[»] chr3 (17 HSPs)
chr3 (93-132)||(23793543-23793582)
chr3 (96-134)||(40122826-40122864)
chr3 (95-132)||(49586992-49587029)
chr3 (93-132)||(33965567-33965606)
chr3 (97-132)||(44374720-44374755)
chr3 (96-131)||(48364956-48364991)
chr3 (95-132)||(1395628-1395665)
chr3 (95-132)||(10101552-10101589)
chr3 (95-132)||(10212477-10212514)
chr3 (95-132)||(15304423-15304460)
chr3 (95-132)||(20192682-20192719)
chr3 (95-132)||(22232783-22232820)
chr3 (95-132)||(25195381-25195418)
chr3 (95-132)||(26990691-26990728)
chr3 (95-132)||(38462238-38462275)
chr3 (96-133)||(53457335-53457372)
chr3 (96-136)||(36725182-36725222)
[»] chr2 (16 HSPs)
chr2 (95-133)||(32098383-32098421)
chr2 (93-132)||(3458612-3458651)
chr2 (93-132)||(18962114-18962153)
chr2 (93-127)||(6546933-6546967)
chr2 (98-132)||(11513858-11513892)
chr2 (95-133)||(15171207-15171245)
chr2 (95-132)||(11344360-11344397)
chr2 (95-132)||(17952777-17952814)
chr2 (95-132)||(33192150-33192187)
chr2 (95-132)||(33256697-33256734)
chr2 (95-132)||(40837504-40837541)
chr2 (96-132)||(14209235-14209271)
chr2 (96-132)||(14666506-14666542)
chr2 (93-121)||(26167701-26167729)
chr2 (96-132)||(28803582-28803618)
chr2 (96-128)||(40758981-40759013)
[»] chr1 (18 HSPs)
chr1 (95-133)||(14737780-14737818)
chr1 (95-132)||(1879103-1879140)
chr1 (95-132)||(15360851-15360888)
chr1 (95-131)||(49517027-49517063)
chr1 (93-132)||(4200184-4200223)
chr1 (93-132)||(6933037-6933076)
chr1 (93-132)||(7274015-7274054)
chr1 (98-132)||(27738256-27738290)
chr1 (95-133)||(50319249-50319287)
chr1 (99-132)||(18420930-18420963)
chr1 (95-132)||(28467383-28467420)
chr1 (95-132)||(30371105-30371142)
chr1 (95-128)||(34179952-34179985)
chr1 (96-129)||(36151584-36151617)
chr1 (95-132)||(38867909-38867946)
chr1 (95-132)||(44032075-44032112)
chr1 (95-131)||(17631178-17631214)
chr1 (96-132)||(47877080-47877116)
[»] chr4 (19 HSPs)
chr4 (95-132)||(53626733-53626770)
chr4 (95-131)||(5131309-5131345)
chr4 (93-132)||(10192239-10192278)
chr4 (95-134)||(24929450-24929489)
chr4 (93-132)||(42321955-42321994)
chr4 (95-128)||(3662305-3662338)
chr4 (95-132)||(4071839-4071876)
chr4 (95-132)||(30024657-30024694)
chr4 (95-132)||(41701517-41701554)
chr4 (95-128)||(47800587-47800620)
chr4 (95-136)||(52294038-52294079)
chr4 (99-132)||(54325113-54325146)
chr4 (95-132)||(54327525-54327562)
chr4 (93-130)||(55870419-55870456)
chr4 (93-133)||(2431552-2431592)
chr4 (101-133)||(7342153-7342185)
chr4 (95-131)||(20936079-20936115)
chr4 (95-131)||(23815327-23815363)
chr4 (93-121)||(30743320-30743348)
[»] chr8 (15 HSPs)
chr8 (95-131)||(29699211-29699247)
chr8 (95-134)||(39866810-39866850)
chr8 (93-132)||(42237498-42237537)
chr8 (94-132)||(7026687-7026725)
chr8 (95-133)||(20672729-20672767)
chr8 (95-132)||(2100762-2100799)
chr8 (95-128)||(10437842-10437875)
chr8 (96-129)||(11000640-11000673)
chr8 (95-128)||(14482159-14482192)
chr8 (95-132)||(25867043-25867080)
chr8 (95-132)||(31915345-31915382)
chr8 (95-128)||(40728498-40728531)
chr8 (99-131)||(34770853-34770885)
chr8 (95-131)||(42597358-42597394)
chr8 (101-133)||(43907874-43907906)
[»] chr6 (10 HSPs)
chr6 (96-132)||(7713983-7714019)
chr6 (93-132)||(2027482-2027521)
chr6 (95-129)||(24836278-24836312)
chr6 (95-132)||(281924-281961)
chr6 (95-128)||(5551419-5551452)
chr6 (95-132)||(22742323-22742360)
chr6 (95-132)||(29274305-29274342)
chr6 (95-127)||(4420574-4420606)
chr6 (95-131)||(29940753-29940789)
chr6 (101-144)||(34940037-34940081)
[»] scaffold0024 (1 HSPs)
scaffold0024 (95-132)||(27533-27570)


Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 44239168 - 44238929
Alignment:
Q  19 atgctatagtggaaaacttatggaaacacttcaactttatttttagtgttataacataagatttgttataagcgtttataacaaaagataaaataaagtc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44239168 atgctatagtggaaaacttatggaaacacttcaactttatttt-agtgttataacataagatttgttataagcgtttataacaaaagataaaataaagtc 44239070  T
Q  119 aaaatgttttcataaacttatggaaacattttgaaaacaataattaccaactcaaaggtcataaaatgcagactagtctgagagcagtttcaataaattt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44239069 aaaatgttttcataaacttatggaaacattttgaaaacaataattacaaactcaaaggtcataaaatgcagactagtctgagagcagtttcaataaattt 44238970  T
Q  219 ataaaaccagtggaattactaattaaccatctaaaactatg 259  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44238969 ataaaaccagtggaattactaattaaccatctaaaactatg 44238929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 1417221 - 1417258
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  1417221 tataacaaaagataaaataaagtcaaattgttttcata 1417258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 5006622 - 5006585
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  5006622 tataacaaaagataaaataaagtcaaactgttttcata 5006585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 39591580 - 39591543
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  39591580 tataacaaaagataaaataaagtcaaattgttttcata 39591543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 17989138 - 17989099
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  17989138 tttataacaaaatataaaataaagtcaaactgttttcata 17989099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 12835047 - 12835013
Alignment:
Q  98 aacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||| ||||||||||    
T  12835047 aacaaaagataaaataaagtcaaattgttttcata 12835013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 30456560 - 30456526
Alignment:
Q  98 aacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||| ||||||||||    
T  30456560 aacaaaagataaaataaagtcaaattgttttcata 30456526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 1418388 - 1418425
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  1418388 tataacaaaagatataataaagtcaatatgttttcata 1418425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 9527203 - 9527166
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  9527203 tataacaaaagatataataaagtcaaactgttttcata 9527166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 23918918 - 23918951
Alignment:
Q  99 acaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||| ||||||||||    
T  23918918 acaaaagataaaataaagtcaaattgttttcata 23918951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 28178926 - 28178963
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  28178926 tataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 133
Target Start/End: Complemental strand, 30160998 - 30160965
Alignment:
Q  100 caaaagataaaataaagtcaaaatgttttcataa 133  Q
    |||||||||||||||||||||| |||||||||||    
T  30160998 caaaagataaaataaagtcaaactgttttcataa 30160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 31002722 - 31002755
Alignment:
Q  99 acaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||| ||||||||    
T  31002722 acaaaagataaaataaagtcaaaatattttcata 31002755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 35536064 - 35536101
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  35536064 tataacataagataaaataaagtcaaattgttttcata 35536101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 45777284 - 45777247
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcata 45777247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 46825055 - 46825092
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  46825055 tataaaaaaagataaaataaagtcaaattgttttcata 46825092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 36639477 - 36639516
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  36639477 tttataacaaaagataaaataaaatcaaaatgttttcata 36639516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 14295463 - 14295500
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  14295463 tataacaaaagataaaataaagtcaaactgttttcata 14295500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 28586879 - 28586842
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  28586879 tataacaaaagataaaataaagtcaaactgttttcata 28586842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 10303758 - 10303794
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    ||||||||||||||||||||||||||| |||||||||    
T  10303758 tataacaaaagataaaataaagtcaaattgttttcat 10303794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 583888 - 583849
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  583888 tttataacagaagataaaataaagtcaaactgttttcata 583849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 985591 - 985625
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttca 130  Q
    |||||||||||||||||||||||||| ||||||||    
T  985591 ataacaaaagataaaataaagtcaaactgttttca 985625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 11615463 - 11615497
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttt 127  Q
    ||||||||||||||||||||||||||||| |||||    
T  11615463 tttataacaaaagataaaataaagtcaaattgttt 11615497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 12242801 - 12242763
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcataa 133  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  12242801 tataacaaaagataaaatagagtcaaattgttttcataa 12242763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 29117043 - 29117009
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttc 129  Q
    ||||||||||||||||||||||||||| |||||||    
T  29117043 tataacaaaagataaaataaagtcaaactgttttc 29117009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 32194195 - 32194157
Alignment:
Q  94 ttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  32194195 ttataacaaaatataaaataaagtcaagatgttttcata 32194157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 12595853 - 12595816
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  12595853 tataacaaaagataaaataaagttaaattgttttcata 12595816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 35135775 - 35135738
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  35135775 tataacaaaagataaaataaagtcaaactattttcata 35135738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 37063187 - 37063150
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  37063187 tataacaaaagataaaataaagtcaaactattttcata 37063150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 1019556 - 1019516
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcataaact 136  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  1019556 ataacaaaagataaactaaagtcaaactgttttcgtaaact 1019516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 10363707 - 10363743
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  10363707 tataacaaaagataaaataaagttaaattgttttcat 10363743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 11835232 - 11835268
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttc 129  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  11835232 tttataacaaaagataaaataaagttaaattgttttc 11835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 35095896 - 35095864
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttt 127  Q
    ||||||||||||||||||||||||||| |||||    
T  35095896 tataacaaaagataaaataaagtcaaattgttt 35095864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 23793543 - 23793582
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  23793543 tttataacaaaagataaaataaagtcaaaatgatttcata 23793582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 40122864 - 40122826
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcataaa 134  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  40122864 ataacaaaagataaaataaagtcaaactgttttcataaa 40122826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 49587029 - 49586992
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  49587029 tataacaaaagataaaataaagtcaaactgttttcata 49586992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 33965606 - 33965567
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  33965606 tttataacaaaaggtaaaataaagtcaaactgttttcata 33965567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 44374755 - 44374720
Alignment:
Q  97 taacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||| ||||||||||    
T  44374755 taacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 48364991 - 48364956
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    |||||||||||||||||||||||||| |||||||||    
T  48364991 ataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 1395628 - 1395665
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  1395628 tataacaaaagataaaataaagtcaaattattttcata 1395665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 10101589 - 10101552
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  10101589 tataacaaaagataaaataaagttaaattgttttcata 10101552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 10212514 - 10212477
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  10212514 tataacaaaagataaaataaagttaaattgttttcata 10212477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 15304460 - 15304423
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  15304460 tataacaaaagataaaataaagttaaattgttttcata 15304423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 20192719 - 20192682
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||||||  |||||||||    
T  20192719 tataacaaaagataaaataaagtcaaacagttttcata 20192682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 22232783 - 22232820
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  22232783 tataacaaatgataaaataaagtcaaactgttttcata 22232820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 25195381 - 25195418
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  25195381 tataacaaaagataaaataaagtcaaattattttcata 25195418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 26990691 - 26990728
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  26990691 tataacaaaagataaaataaagtcaaattcttttcata 26990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 38462238 - 38462275
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  38462238 tataccaaaagataaaataaagtcaaactgttttcata 38462275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 53457335 - 53457372
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcataa 133  Q
    |||||||||||||||||||||||||| | |||||||||    
T  53457335 ataacaaaagataaaataaagtcaaactattttcataa 53457372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 36725222 - 36725182
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcataaact 136  Q
    |||||||||||||||| ||||||||| |||| |||||||||    
T  36725222 ataacaaaagataaaacaaagtcaaattgttctcataaact 36725182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 32098421 - 32098383
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcataa 133  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  32098421 tataacaaaagataaaataaagtcaaagtgttttcataa 32098383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 3458612 - 3458651
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  3458612 tttataacaaaagataaaataaagtcaaacttttttcata 3458651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 18962153 - 18962114
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  18962153 tttataacaaaagataaaataaagttaaactgttttcata 18962114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 6546933 - 6546967
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttt 127  Q
    ||||||||||||||||||||||||||||| |||||    
T  6546933 tttataacaaaagataaaataaagtcaaattgttt 6546967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 11513858 - 11513892
Alignment:
Q  98 aacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||| ||||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcata 11513892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 15171207 - 15171245
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcataa 133  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  15171207 tataacagaagataaattaaagtcaaaatgttttcataa 15171245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 11344397 - 11344360
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  11344397 tataacaaaagataaaagaaagtcaaattgttttcata 11344360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 17952814 - 17952777
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  17952814 tataacaaaagataaaataaagtcaaactattttcata 17952777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 33192150 - 33192187
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  33192150 tataacataagataaaataaagtcaaactgttttcata 33192187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 33256697 - 33256734
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  33256697 tataacaatagataaaataaagtcaaactgttttcata 33256734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 40837541 - 40837504
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  40837541 tataacaaaagataaattaaagtcaaattgttttcata 40837504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 14209235 - 14209271
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  14209235 ataacaaaagataaaataaattcaaactgttttcata 14209271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 14666506 - 14666542
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||||| || |||||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcata 14666542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 121
Target Start/End: Original strand, 26167701 - 26167729
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaa 121  Q
    |||||||||||||||||||||||||||||    
T  26167701 tttataacaaaagataaaataaagtcaaa 26167729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 28803618 - 28803582
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||||| || |||||||    
T  28803618 ataacaaaagataaaataaagtcaaactgatttcata 28803582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 40758981 - 40759013
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgtttt 128  Q
    |||||||||||||||||||||||||| ||||||    
T  40758981 ataacaaaagataaaataaagtcaaattgtttt 40759013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 14737818 - 14737780
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcataa 133  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  14737818 tataacaaaagataaaataaagtcaaattgttttcataa 14737780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 1879140 - 1879103
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  1879140 tataacagaagataaaataaagtcaaaatgttttcata 1879103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 15360851 - 15360888
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  15360851 tataacaaaagataaaataaagtcaaactgttttcata 15360888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 49517027 - 49517063
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    ||||||||||||||||||||||||||| |||||||||    
T  49517027 tataacaaaagataaaataaagtcaaattgttttcat 49517063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 4200184 - 4200223
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  4200184 tttataacaaaagataaaataaagtcaagttgttttcata 4200223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 6933076 - 6933037
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  6933076 tttataacaaaacataaaataaagtcaaattgttttcata 6933037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 7274054 - 7274015
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  7274054 tttataacaaaagatgaaataaagtcaaattgttttcata 7274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 27738290 - 27738256
Alignment:
Q  98 aacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||| ||||||||||    
T  27738290 aacaaaagataaaataaagtcaaattgttttcata 27738256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 50319249 - 50319287
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcataa 133  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  50319249 tataacaaaagataaaataaagtcaagttgttttcataa 50319287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 18420963 - 18420930
Alignment:
Q  99 acaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||||||| |||||    
T  18420963 acaaaagataaaataaagtcaaaatgttctcata 18420930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 28467420 - 28467383
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcata 28467383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 30371105 - 30371142
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcata 30371142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 34179985 - 34179952
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgtttt 128  Q
    ||||||||||||||||||||||||||| ||||||    
T  34179985 tataacaaaagataaaataaagtcaaattgtttt 34179952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 36151617 - 36151584
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttc 129  Q
    |||||||||||||||||||||||||| |||||||    
T  36151617 ataacaaaagataaaataaagtcaaattgttttc 36151584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 38867946 - 38867909
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  38867946 tataccaaaagattaaataaagtcaaaatgttttcata 38867909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 44032112 - 44032075
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  44032112 tataacaaaagctaaaataaagtcaaattgttttcata 44032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 17631214 - 17631178
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    |||||||||||||||||||||||| || |||||||||    
T  17631214 tataacaaaagataaaataaagtctaactgttttcat 17631178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 47877080 - 47877116
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  47877080 ataacaaaagataaaataaaatcaaattgttttcata 47877116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 53626733 - 53626770
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  53626733 tataacaaaagataaaataaattcaaaatgttttcata 53626770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 5131345 - 5131309
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    ||||||||||||||||||||||| |||||||||||||    
T  5131345 tataacaaaagataaaataaagttaaaatgttttcat 5131309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 10192239 - 10192278
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  10192239 tttataacaaaagatagaataaagtcaaattgttttcata 10192278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 24929450 - 24929489
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcataaa 134  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  24929450 tataacaaaagataaaataaagtctaactgttttcataaa 24929489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 42321994 - 42321955
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  42321994 tttataacaaatgataaaataaagtcaaattgttttcata 42321955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 3662305 - 3662338
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgtttt 128  Q
    ||||||||||||||||||||||||||| ||||||    
T  3662305 tataacaaaagataaaataaagtcaaactgtttt 3662338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 4071839 - 4071876
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  4071839 tataacaaaagataaaataaagtcaaattattttcata 4071876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 30024657 - 30024694
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  30024657 tataacaaaagataaaataaagtaaaattgttttcata 30024694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 41701554 - 41701517
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||||||  |||||||||    
T  41701554 tataacaaaagataaaataaagtcaaatcgttttcata 41701517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 47800587 - 47800620
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgtttt 128  Q
    ||||||||||||||||||||||| ||||||||||    
T  47800587 tataacaaaagataaaataaagttaaaatgtttt 47800620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 52294079 - 52294038
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcataaact 136  Q
    |||||| |||||||||||||||| ||| ||||||||||||||    
T  52294079 tataaccaaagataaaataaagtgaaattgttttcataaact 52294038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 54325146 - 54325113
Alignment:
Q  99 acaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||| ||||||||||    
T  54325146 acaaaagataaaataaagtcaaactgttttcata 54325113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 54327562 - 54327525
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  54327562 tataacaaaagataaaacaaagtcaaactgttttcata 54327525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 55870456 - 55870419
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttca 130  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  55870456 tttataacaaaagatcaaataaagtcaaactgttttca 55870419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 2431552 - 2431592
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcataa 133  Q
    ||||| |||||||||||| | ||||||||||||||||||||    
T  2431552 tttattacaaaagataaagttaagtcaaaatgttttcataa 2431592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 7342153 - 7342185
Alignment:
Q  101 aaaagataaaataaagtcaaaatgttttcataa 133  Q
    ||||||||||||||||||||| |||||||||||    
T  7342153 aaaagataaaataaagtcaaactgttttcataa 7342185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 20936115 - 20936079
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    ||||||||||||||||||||||||||| | |||||||    
T  20936115 tataacaaaagataaaataaagtcaaactattttcat 20936079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 23815327 - 23815363
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    |||||||||||||||||||| |||||| |||||||||    
T  23815327 tataacaaaagataaaataatgtcaaactgttttcat 23815363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 121
Target Start/End: Original strand, 30743320 - 30743348
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaa 121  Q
    |||||||||||||||||||||||||||||    
T  30743320 tttataacaaaagataaaataaagtcaaa 30743348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 29699211 - 29699247
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    |||||||||||||||||||||||||||||||| ||||    
T  29699211 tataacaaaagataaaataaagtcaaaatgttgtcat 29699247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 39866850 - 39866810
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaa-tgttttcataaa 134  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  39866850 tataacaaaagataaaataaagtcaaaactgttttcataaa 39866810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 42237537 - 42237498
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  42237537 tttataacaaaagataaaataaagttaaattgttttcata 42237498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 7026687 - 7026725
Alignment:
Q  94 ttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  7026687 ttataacaaaagataaaataaagtaaaattgttttcata 7026725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 20672729 - 20672767
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcataa 133  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  20672729 tataacaaaagataaaataaagtcaaactgtttttataa 20672767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 2100762 - 2100799
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  2100762 tatagcaaaagataaaataaagtcaaaatattttcata 2100799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 10437842 - 10437875
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgtttt 128  Q
    ||||||||||||||||||||||||||| ||||||    
T  10437842 tataacaaaagataaaataaagtcaaactgtttt 10437875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 11000673 - 11000640
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttc 129  Q
    |||||||||||||||||||||||||| |||||||    
T  11000673 ataacaaaagataaaataaagtcaaattgttttc 11000640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 14482159 - 14482192
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgtttt 128  Q
    ||||||||||||||||||||||||||| ||||||    
T  14482159 tataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 25867043 - 25867080
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  25867043 tataacaaaagatgaaataaagtcaaaatattttcata 25867080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 31915382 - 31915345
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  31915382 tataacaaaagatagaataaagtcaaattgttttcata 31915345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 40728531 - 40728498
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgtttt 128  Q
    ||||||||||||||||||||||||||| ||||||    
T  40728531 tataacaaaagataaaataaagtcaaactgtttt 40728498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 34770853 - 34770885
Alignment:
Q  99 acaaaagataaaataaagtcaaaatgttttcat 131  Q
    ||||||||||||||||||||||| |||||||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcat 34770885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 42597358 - 42597394
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  42597358 tataacaaaagataaaataaagtaaaattgttttcat 42597394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 43907906 - 43907874
Alignment:
Q  101 aaaagataaaataaagtcaaaatgttttcataa 133  Q
    ||||||||||||||||||||| |||||||||||    
T  43907906 aaaagataaaataaagtcaaattgttttcataa 43907874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 7713983 - 7714019
Alignment:
Q  96 ataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||||||||||||||||||||||||| ||||||||||    
T  7713983 ataacaaaagataaaataaagtcaaattgttttcata 7714019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 2027521 - 2027482
Alignment:
Q  93 tttataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  2027521 tttataacaaaagataaaataaagtcaaactattttcata 2027482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 24836312 - 24836278
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttc 129  Q
    ||||||||||||||||||||||||||| |||||||    
T  24836312 tataacaaaagataaaataaagtcaaattgttttc 24836278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 281961 - 281924
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  281961 tataacaaaagataaaataaagtcaacttgttttcata 281924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 5551419 - 5551452
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgtttt 128  Q
    ||||||||||||||||||||||||||| ||||||    
T  5551419 tataacaaaagataaaataaagtcaaattgtttt 5551452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 22742323 - 22742360
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  22742323 tataacaaaggataaaataaagtcaaattgttttcata 22742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 29274342 - 29274305
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  29274342 tatagcaaaagataaaataaagtcaaattgttttcata 29274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 127
Target Start/End: Original strand, 4420574 - 4420606
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttt 127  Q
    ||||||||||||||||||||||||||| |||||    
T  4420574 tataacaaaagataaaataaagtcaaactgttt 4420606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 29940753 - 29940789
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcat 131  Q
    ||||||||||||||||||||||||||  |||||||||    
T  29940753 tataacaaaagataaaataaagtcaatttgttttcat 29940789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 34940037 - 34940081
Alignment:
Q  101 aaaagataaaataaagtcaaaatg-ttttcataaacttatggaaa 144  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||    
T  34940037 aaaagataaaataaagtcaatatgtttttcataagcttatggaaa 34940081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 27533 - 27570
Alignment:
Q  95 tataacaaaagataaaataaagtcaaaatgttttcata 132  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  27533 tataacagaagataaaataaagtcaaattgttttcata 27570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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