View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12882_low_60 (Length: 240)
Name: NF12882_low_60
Description: NF12882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12882_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 30395987 - 30396131
Alignment:
| Q |
83 |
aaaaataatatcaatatgttacattaattattattttttcactattatataagacacaccaccctgaacatactttcattcatactcttcatattacacc |
182 |
Q |
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| T |
30395987 |
aaaaataatatcaaagtgtcacattaattatttttttt--actattatataagacacaccaccctgaacacactttcattcatactctccatattacacc |
30396084 |
T |
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| Q |
183 |
accctaccttacatttcaggttcacctagtttataaccttcattctt |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30396085 |
accctaccttacatttcaggttcacctagtttataaccttcattctt |
30396131 |
T |
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