View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12884_low_23 (Length: 228)

Name: NF12884_low_23
Description: NF12884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12884_low_23
NF12884_low_23
[»] chr7 (1 HSPs)
chr7 (7-105)||(46140351-46140449)


Alignment Details
Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 46140351 - 46140449
Alignment:
7 ggtataacatatttgaatcgtaataggttttagttttacctgggttgtcttgtctgaaaacaatagacgaacagtttgtaagcatatttggaaaaacat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
46140351 ggtataacatatttgaatcgtaataggttttagttttacctgggttgtcttgtctgaaaacaatagaagaacagtttgtaagcatatttggaaaaacat 46140449  T

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