View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12887_low_6 (Length: 341)

Name: NF12887_low_6
Description: NF12887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12887_low_6
NF12887_low_6
[»] chr6 (26 HSPs)
chr6 (23-190)||(18155885-18156052)
chr6 (26-190)||(18155306-18155470)
chr6 (23-190)||(23002095-23002260)
chr6 (23-190)||(23786130-23786295)
chr6 (26-190)||(23001518-23001678)
chr6 (26-190)||(23786712-23786872)
chr6 (23-190)||(21039876-21040042)
chr6 (23-190)||(21084927-21085093)
chr6 (23-164)||(21062994-21063133)
chr6 (199-312)||(19872024-19872137)
chr6 (199-312)||(18404268-18404381)
chr6 (199-312)||(21765648-21765761)
chr6 (199-312)||(22437705-22437812)
chr6 (199-312)||(23082259-23082372)
chr6 (242-312)||(2871137-2871207)
chr6 (242-312)||(25116436-25116506)
chr6 (203-312)||(5835563-5835672)
chr6 (248-312)||(24292116-24292180)
chr6 (242-312)||(28259532-28259602)
chr6 (242-312)||(28286314-28286384)
chr6 (242-312)||(28313506-28313576)
chr6 (242-312)||(28338281-28338351)
chr6 (203-283)||(25755971-25756051)
chr6 (201-281)||(25958116-25958196)
chr6 (232-312)||(27206488-27206568)
chr6 (232-312)||(27242660-27242740)
[»] scaffold0490 (1 HSPs)
scaffold0490 (199-315)||(892-1008)
[»] scaffold0090 (1 HSPs)
scaffold0090 (199-330)||(30171-30302)
[»] scaffold0501 (1 HSPs)
scaffold0501 (199-312)||(843-956)
[»] scaffold0411 (1 HSPs)
scaffold0411 (199-312)||(9412-9525)
[»] scaffold0540 (1 HSPs)
scaffold0540 (199-312)||(10070-10183)
[»] scaffold0358 (1 HSPs)
scaffold0358 (199-312)||(9948-10061)
[»] scaffold0218 (1 HSPs)
scaffold0218 (199-312)||(23916-24029)
[»] chr2 (21 HSPs)
chr2 (199-312)||(23039347-23039460)
chr2 (199-330)||(24679090-24679221)
chr2 (199-312)||(22741693-22741806)
chr2 (199-312)||(23030364-23030477)
chr2 (199-312)||(22732501-22732614)
chr2 (199-312)||(23028189-23028302)
chr2 (199-326)||(20321584-20321717)
chr2 (241-312)||(23104459-23104530)
chr2 (199-312)||(23065978-23066091)
chr2 (199-312)||(23075428-23075541)
chr2 (203-312)||(21319730-21319839)
chr2 (232-283)||(23115815-23115866)
chr2 (199-287)||(24816591-24816679)
chr2 (232-312)||(24873481-24873560)
chr2 (203-312)||(22462208-22462317)
chr2 (199-253)||(24704268-24704322)
chr2 (248-312)||(22322072-22322136)
chr2 (242-312)||(16932150-16932220)
chr2 (242-312)||(41605813-41605883)
chr2 (232-312)||(24656385-24656465)
chr2 (248-312)||(24713683-24713747)
[»] scaffold0423 (1 HSPs)
scaffold0423 (199-312)||(822-935)
[»] scaffold0403 (1 HSPs)
scaffold0403 (199-312)||(15912-16025)
[»] scaffold0114 (1 HSPs)
scaffold0114 (199-312)||(16539-16652)
[»] scaffold0081 (2 HSPs)
scaffold0081 (199-312)||(22606-22719)
scaffold0081 (199-312)||(38030-38143)
[»] scaffold0042 (1 HSPs)
scaffold0042 (199-312)||(36010-36123)
[»] scaffold0309 (1 HSPs)
scaffold0309 (199-294)||(20097-20192)
[»] chr8 (18 HSPs)
chr8 (199-310)||(19982005-19982116)
chr8 (199-312)||(18880287-18880400)
chr8 (199-312)||(21163160-21163273)
chr8 (199-312)||(21390522-21390635)
chr8 (199-312)||(21779848-21779961)
chr8 (202-312)||(6518411-6518521)
chr8 (201-312)||(21672555-21672666)
chr8 (199-326)||(22420509-22420636)
chr8 (199-261)||(17354579-17354641)
chr8 (232-312)||(17829600-17829680)
chr8 (242-312)||(22116808-22116878)
chr8 (203-312)||(15537425-15537534)
chr8 (203-312)||(32604187-32604296)
chr8 (242-312)||(22125592-22125662)
chr8 (203-312)||(30309774-30309883)
chr8 (248-312)||(17670655-17670719)
chr8 (242-281)||(18860655-18860694)
chr8 (203-283)||(22043860-22043940)
[»] scaffold0718 (1 HSPs)
scaffold0718 (199-312)||(6192-6305)
[»] scaffold0273 (1 HSPs)
scaffold0273 (199-312)||(9425-9538)
[»] scaffold0064 (1 HSPs)
scaffold0064 (199-312)||(65720-65833)
[»] chr4 (13 HSPs)
chr4 (199-312)||(16241037-16241150)
chr4 (199-310)||(15143878-15143989)
chr4 (199-312)||(14964-15077)
chr4 (200-312)||(16349729-16349841)
chr4 (200-312)||(14163443-14163555)
chr4 (242-312)||(14299909-14299979)
chr4 (203-312)||(18223401-18223510)
chr4 (242-312)||(12480612-12480682)
chr4 (203-312)||(16247603-16247712)
chr4 (242-283)||(40477052-40477093)
chr4 (23-128)||(47271105-47271210)
chr4 (23-128)||(47280834-47280939)
chr4 (248-312)||(23959765-23959829)
[»] chr1 (11 HSPs)
chr1 (199-312)||(22459339-22459452)
chr1 (199-312)||(22469768-22469881)
chr1 (199-312)||(22832418-22832531)
chr1 (199-283)||(22435031-22435115)
chr1 (199-280)||(21753004-21753085)
chr1 (239-312)||(24784121-24784194)
chr1 (201-312)||(20247207-20247318)
chr1 (242-312)||(16346856-16346926)
chr1 (242-312)||(16353505-16353575)
chr1 (248-312)||(33387291-33387355)
chr1 (248-312)||(51329754-51329818)
[»] scaffold0120 (2 HSPs)
scaffold0120 (199-326)||(12264-12391)
scaffold0120 (199-312)||(15085-15198)
[»] scaffold0198 (1 HSPs)
scaffold0198 (199-312)||(31288-31401)
[»] chr5 (17 HSPs)
chr5 (199-312)||(21883681-21883794)
chr5 (199-312)||(25430324-25430437)
chr5 (201-312)||(20804503-20804614)
chr5 (232-312)||(22351853-22351933)
chr5 (203-312)||(23536584-23536693)
chr5 (242-312)||(29472445-29472515)
chr5 (232-312)||(18783051-18783131)
chr5 (242-312)||(22138612-22138682)
chr5 (242-312)||(22329259-22329329)
chr5 (242-312)||(27681772-27681842)
chr5 (242-283)||(14996140-14996181)
chr5 (248-312)||(41774793-41774857)
chr5 (203-261)||(23461812-23461870)
chr5 (242-312)||(27614300-27614370)
chr5 (242-284)||(37287896-37287938)
chr5 (263-312)||(21560397-21560446)
chr5 (199-312)||(26733863-26733976)
[»] chr3 (20 HSPs)
chr3 (199-312)||(11861943-11862056)
chr3 (199-312)||(23078436-23078549)
chr3 (199-312)||(17498282-17498395)
chr3 (199-318)||(14873006-14873124)
chr3 (199-312)||(15458852-15458965)
chr3 (204-312)||(14577847-14577955)
chr3 (242-312)||(12890340-12890410)
chr3 (204-310)||(16695760-16695866)
chr3 (203-312)||(23414216-23414325)
chr3 (242-312)||(3689574-3689644)
chr3 (248-318)||(10009237-10009307)
chr3 (199-261)||(12502488-12502550)
chr3 (200-261)||(15066660-15066721)
chr3 (248-312)||(15344674-15344738)
chr3 (232-312)||(24186774-24186854)
chr3 (242-312)||(6604366-6604436)
chr3 (242-312)||(15359681-15359751)
chr3 (242-312)||(15398948-15399018)
chr3 (242-312)||(16753130-16753200)
chr3 (242-312)||(20058483-20058553)
[»] scaffold0393 (1 HSPs)
scaffold0393 (200-312)||(433-545)
[»] scaffold0034 (1 HSPs)
scaffold0034 (199-312)||(121358-121471)
[»] scaffold0080 (3 HSPs)
scaffold0080 (200-312)||(32881-32993)
scaffold0080 (199-312)||(20912-21025)
scaffold0080 (199-281)||(55639-55721)
[»] scaffold0029 (2 HSPs)
scaffold0029 (199-310)||(9215-9326)
scaffold0029 (242-312)||(106967-107037)
[»] scaffold0022 (3 HSPs)
scaffold0022 (199-310)||(33964-34075)
scaffold0022 (199-283)||(42633-42717)
scaffold0022 (199-283)||(76353-76437)
[»] scaffold0261 (1 HSPs)
scaffold0261 (199-312)||(240-353)
[»] scaffold0023 (1 HSPs)
scaffold0023 (199-312)||(41201-41314)
[»] scaffold0017 (3 HSPs)
scaffold0017 (201-330)||(194040-194169)
scaffold0017 (203-318)||(20772-20887)
scaffold0017 (239-318)||(16250-16329)
[»] scaffold0280 (1 HSPs)
scaffold0280 (200-312)||(23416-23528)
[»] scaffold0621 (2 HSPs)
scaffold0621 (199-312)||(1018-1131)
scaffold0621 (199-312)||(5435-5548)
[»] scaffold0102 (1 HSPs)
scaffold0102 (203-312)||(49535-49644)
[»] scaffold0412 (1 HSPs)
scaffold0412 (201-312)||(14778-14889)
[»] scaffold1220 (1 HSPs)
scaffold1220 (200-318)||(738-856)
[»] scaffold0075 (1 HSPs)
scaffold0075 (199-312)||(54662-54775)
[»] scaffold0071 (1 HSPs)
scaffold0071 (199-312)||(3226-3339)
[»] scaffold1459 (1 HSPs)
scaffold1459 (200-312)||(282-394)
[»] scaffold0207 (1 HSPs)
scaffold0207 (199-326)||(3723-3850)
[»] scaffold0278 (1 HSPs)
scaffold0278 (199-312)||(4552-4665)
[»] chr7 (9 HSPs)
chr7 (199-312)||(14043656-14043769)
chr7 (199-312)||(14353686-14353799)
chr7 (201-312)||(15145119-15145230)
chr7 (242-312)||(13690042-13690112)
chr7 (232-312)||(11549301-11549381)
chr7 (242-312)||(11233412-11233482)
chr7 (242-312)||(15157256-15157326)
chr7 (199-291)||(11526574-11526666)
chr7 (232-318)||(14958499-14958585)
[»] scaffold0079 (1 HSPs)
scaffold0079 (200-312)||(37440-37552)
[»] scaffold0420 (1 HSPs)
scaffold0420 (199-309)||(7345-7455)
[»] scaffold0324 (1 HSPs)
scaffold0324 (199-312)||(2713-2826)
[»] scaffold0008 (3 HSPs)
scaffold0008 (199-312)||(15802-15915)
scaffold0008 (203-312)||(854-963)
scaffold0008 (239-312)||(138789-138862)
[»] scaffold0028 (3 HSPs)
scaffold0028 (240-312)||(12491-12563)
scaffold0028 (240-312)||(22019-22091)
scaffold0028 (232-312)||(56035-56115)
[»] scaffold0122 (1 HSPs)
scaffold0122 (199-312)||(39787-39900)
[»] scaffold0447 (1 HSPs)
scaffold0447 (199-312)||(1203-1316)
[»] scaffold0383 (1 HSPs)
scaffold0383 (199-312)||(4067-4180)
[»] scaffold0431 (1 HSPs)
scaffold0431 (240-312)||(11406-11478)
[»] scaffold0018 (1 HSPs)
scaffold0018 (199-287)||(8565-8653)
[»] scaffold0413 (1 HSPs)
scaffold0413 (205-312)||(4549-4656)
[»] scaffold0357 (1 HSPs)
scaffold0357 (201-312)||(17168-17278)
[»] scaffold0084 (1 HSPs)
scaffold0084 (199-310)||(9224-9335)
[»] scaffold0297 (1 HSPs)
scaffold0297 (199-261)||(11665-11727)
[»] scaffold0040 (2 HSPs)
scaffold0040 (242-312)||(104750-104820)
scaffold0040 (242-283)||(21177-21218)
[»] scaffold0010 (2 HSPs)
scaffold0010 (203-312)||(22193-22302)
scaffold0010 (203-312)||(15429-15538)
[»] scaffold0007 (1 HSPs)
scaffold0007 (232-312)||(49696-49776)
[»] scaffold0003 (2 HSPs)
scaffold0003 (232-312)||(425333-425413)
scaffold0003 (203-312)||(138691-138800)
[»] scaffold0339 (2 HSPs)
scaffold0339 (23-128)||(330-435)
scaffold0339 (23-128)||(9321-9426)
[»] scaffold0109 (1 HSPs)
scaffold0109 (239-312)||(42193-42266)
[»] scaffold0009 (1 HSPs)
scaffold0009 (203-312)||(229042-229151)
[»] scaffold0556 (1 HSPs)
scaffold0556 (211-283)||(5758-5830)
[»] scaffold0044 (1 HSPs)
scaffold0044 (203-283)||(18165-18245)
[»] scaffold0001 (1 HSPs)
scaffold0001 (199-283)||(442653-442737)
[»] scaffold0451 (1 HSPs)
scaffold0451 (203-318)||(13214-13329)
[»] scaffold0395 (1 HSPs)
scaffold0395 (199-258)||(15767-15826)
[»] scaffold0289 (1 HSPs)
scaffold0289 (199-261)||(789-851)
[»] scaffold0180 (1 HSPs)
scaffold0180 (246-312)||(30250-30316)
[»] scaffold0819 (1 HSPs)
scaffold0819 (200-261)||(1105-1166)
[»] scaffold0282 (1 HSPs)
scaffold0282 (242-283)||(12817-12858)
[»] scaffold0243 (1 HSPs)
scaffold0243 (216-312)||(23386-23481)
[»] scaffold0046 (1 HSPs)
scaffold0046 (202-286)||(933-1017)


Alignment Details
Target: chr6 (Bit Score: 152; Significance: 2e-80; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 18156052 - 18155885
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    |||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18156052 gagactccaagaagatcaacaagaatcattgacaaggccaaggcagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 18155953  T
Q  123 cagcttatttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 190  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18155952 caacttatttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 18155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 18155306 - 18155470
Alignment:
Q  26 actccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcag 125  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  18155306 actccaagaagatcaacaagaatcattgagaaggccaaggcagctgctctagtagagcatcaaagtgagccccctaagaaacaacgcaaaaagtcatcag 18155405  T
Q  126 cttatttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18155406 cttatttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 18155470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 23002260 - 23002095
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  23002260 gagactccaagaagatcagcaagaatcattgagaaggccaaggcagctcctctagtagagcatcaaagtgagccccctaagaaatggggcaaaaagtcag 23002161  T
Q  123 cagcttatttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 190  Q
    || | |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23002160 caacgtatttaaaa--gcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 23002095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 23786130 - 23786295
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  23786130 gagactccaagaagatcagcaagaatcattgagaaggccaaggcagctcctctagtagagcatcaaagtgagccccctaagaaatggggcaaaaagtcag 23786229  T
Q  123 cagcttatttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 190  Q
    || | |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23786230 caacgtatttaaaa--gcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 23786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 23001518 - 23001678
Alignment:
Q  26 actccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcag 125  Q
    ||||||||||||||| |||||||||||||||||||||  ||   |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23001518 actccaagaagatcaacaagaatcattgagaaggccacaact--tcctctagtagagcatcaaagtgagccccctaagaaacggggcaaaaagtcagcag 23001615  T
Q  126 cttatttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 190  Q
     ||||||||||  ||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  23001616 gttatttaaaa--gcatcaaaacggaagattgatgacatggacctgaagggtctgaagttgtcca 23001678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 23786872 - 23786712
Alignment:
Q  26 actccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcagcag 125  Q
    ||||||||||||||| |||||||||||||||||||||  ||   |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23786872 actccaagaagatcaacaagaatcattgagaaggccacaact--tcctctagtagagcatcaaagtgagccccctaagaaacggggcaaaaagtcagcag 23786775  T
Q  126 cttatttaaaagcgcatcaaaacggaagattgatgacaaggagttgaagggtctgaagttgtcca 190  Q
     ||||||||||  ||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  23786774 gttatttaaaa--gcatcaaaacggaagattgatgacatggacctgaagggtctgaagttgtcca 23786712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 21040042 - 21039876
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    ||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||    
T  21040042 gagactccaagaagatcggcaaggatcatcgagaaggccaaggcagctcctctagtggagcatgaaagtgaaccccctaagaaacggggcaaaaagtcag 21039943  T
Q  123 cagcttatttaaaagcgcatcaaaacggaagattgatgac-aaggagttgaagggtctgaagttgtcca 190  Q
    || |  ||||||||  ||||||||| | |||||||||||| ||| || ||| |||||||||||||||||    
T  21039942 catcaaatttaaaa--gcatcaaaaggaaagattgatgacaaagcagctgaggggtctgaagttgtcca 21039876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 21085093 - 21084927
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    ||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||    
T  21085093 gagactccaagaagatcggcaaggatcatcgagaaggccaaggcagctcctctagtggagcatgaaagtgaaccccctaagaaacggggcaaaaagtcag 21084994  T
Q  123 cagcttatttaaaagcgcatcaaaacggaagattgatgac-aaggagttgaagggtctgaagttgtcca 190  Q
    || |  ||||||||  ||||||||| | |||||||||||| ||| || ||| |||||||||||||||||    
T  21084993 catcaaatttaaaa--gcatcaaaaggaaagattgatgacaaagcagctgaggggtctgaagttgtcca 21084927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 21063133 - 21062994
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    ||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||    
T  21063133 gagactccaagaagatcggcaaggatcatcgagaaggccaaggcagctcctctagtggagcatgaaagtgaaccccctaagaaacggggcaaaaagtcag 21063034  T
Q  123 cagcttatttaaaagcgcatcaaaacggaagattgatgacaa 164  Q
    || |  ||||||||  ||||| ||| ||||||||||||||||    
T  21063033 catcagatttaaaa--gcatctaaagggaagattgatgacaa 21062994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 19872024 - 19872137
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||  ||||| |  |||||||||| |||| ||||||||||| ||||||||||||||||||| |||||| ||| |||||||| |    
T  19872024 agtaggaggatgattcctcaagaaggtctcaagcatcctcgactcaacattcgcaccaacatttgcattaggctgttgccccacagcttgagctacggtt 19872123  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  19872124 tgtagtgcagcagc 19872137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 18404381 - 18404268
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||| |||||| | |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| ||| ||| ||||||  ||    
T  18404381 agtaggaggatgattcctcataaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgatgtccaacagcttgagctacaact 18404282  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||||||||    
T  18404281 tctagtgcagcagc 18404268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 21765648 - 21765761
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||  ||||| |  |||||||| | |||| ||||| |||||||||| |||||||| ||||| | || | ||| ||||||||||    
T  21765648 agtaggaggatgattcctcatgaaggtctcaagcatcctagactcaacattcacaccagcattcgcattaggttgttgcctcatagcttgagctacggct 21765747  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  21765748 tgtagtgcagcagc 21765761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 22437705 - 22437812
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||| |||||| |  |||||||||| ||||||||||||||||      ||||||||||||||||  ||||||| ||||||||||    
T  22437705 agtaggaggatgattcctcataaaggtctcaagcatcctcgactcagcattcgcacca------gcattaggctgttgtcaaacaacttgagctacggct 22437798  T
Q  299 tgtagtgcagcagc 312  Q
    | || || ||||||    
T  22437799 tatattgtagcagc 22437812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 23082259 - 23082372
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||||||||| |  | |||||||   |||| ||| |||||| |||||||||||||||| || |||||||||| ||| || |||    
T  23082259 agtaggaggatgattcctcagaaaggtctccaacatcctcacttcagaattagcaccaacatttgcattaggctgatgccccacaacttgagccacagct 23082358  T
Q  299 tgtagtgcagcagc 312  Q
    |  |||||||||||    
T  23082359 tccagtgcagcagc 23082372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 2871207 - 2871137
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  2871207 tcagcgttcgcaccagcatttgcattaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 2871137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 25116436 - 25116506
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||   | || |||||||| ||||||||    
T  25116436 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttggacaacagcttgtagagcagcagc 25116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 5835672 - 5835563
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||||||||  || || |  | ||||||||||||||| ||| |||||||||| || ||||| |||||||||||| |||  || || |||||||    
T  5835672 ggaggatgattcctcatgaaagtctccaacatcctcgtctcagcgttcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgta 5835573  T
Q  303 gtgcagcagc 312  Q
      ||||||||    
T  5835572 aagcagcagc 5835563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 24292180 - 24292116
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  24292180 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 24292116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 28259602 - 28259532
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  28259602 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 28259532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 28286314 - 28286384
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  28286314 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 28286384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 28313506 - 28313576
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  28313506 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 28313576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 28338351 - 28338281
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  28338351 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 28338281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 25756051 - 25755971
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    ||||||||||||||||  ||||| | || ||| ||||||||||||||| ||||| ||||    ||||| ||||||||||||    
T  25756051 ggaggatgattcctcatgaaggtctctaacattctcgtctcagcattcacaccatcattcatgttaggttgttgtcccaca 25755971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 25958196 - 25958116
Alignment:
Q  201 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtccca 281  Q
    |||| ||||||||||||| ||| ||||  | |||||||   ||||||||  |||||||| | |||||||||||||||||||    
T  25958196 taggcggatgattcctcataaaagtttccaacatcctcacttcagcattaacaccagcactagcattaggctgttgtccca 25958116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 27206488 - 27206568
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||| | ||||||||| |||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  27206488 catcctagcctcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 27206568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 27242740 - 27242660
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||| | ||||||||| |||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  27242740 catcctagcctcagcatttgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 27242660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 199 - 315
Target Start/End: Original strand, 892 - 1008
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  892 agtaggaggatgattcctcaggaaggtctctagcatcctcatctcagcattcgcaccagcatttgcattaggctgttgtcccacagcttgagctacggct 991  T
Q  299 tgtagtgcagcagccaa 315  Q
    |||||||||||||||||    
T  992 tgtagtgcagcagccaa 1008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 199 - 330
Target Start/End: Complemental strand, 30302 - 30171
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| ||    
T  30302 agtaggaggatgattcctcaggaaggtctctagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacagcttgagctacgtct 30203  T
Q  299 tgtagtgcagcagccaatgctacgtcgtctct 330  Q
    |||||||||||||| || || |||||||||||    
T  30202 tgtagtgcagcagctaacgcaacgtcgtctct 30171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 843 - 956
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  843 agtaggaggatgattcctcagaaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgtcccacaacttgagctacggct 942  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||| ||||    
T  943 tgtagtgcaacagc 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 9412 - 9525
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||| ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  9412 agtaagaggatgattcctcagaaaagtctctagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacagcttaagctacgact 9511  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  9512 tgtagtgcagcagc 9525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 10183 - 10070
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||    
T  10183 agtaggaggatgattcctcagaaaagtctctagcatcctcgtctcagcattcgtaccagcatttgcattaggttgttgtcccacagcttgagctacggct 10084  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  10083 tgtagtgcagcagc 10070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 9948 - 10061
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||| ||||||||||||||||||| || | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  9948 agtatgaggatgattcctcagaaaagtctctagcatcctcgtctcagcattcgcacgagcatttgcattaggctgttgtcccacagcttgagctacggct 10047  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  10048 tgtagtgcagcagc 10061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 24029 - 23916
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||    
T  24029 agtaggaggatgattcctcaaaaaagtctctagcatcctcgtctcagcattcgcaccagcatttgcattaggctattgtcccacaacttgagctacgact 23930  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  23929 tgtagtgcagcagc 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 5e-41; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 23039460 - 23039347
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||  |||||| ||    
T  23039460 agtaggaggatgattcctcagaaaggtctatagcatcctcctctcagcattcgcaccatcatttgcattaggctgttgtcccacagcttgtgctacgact 23039361  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  23039360 tgtagtgcagcagc 23039347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 330
Target Start/End: Original strand, 24679090 - 24679221
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||| | |||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  |||||||||    
T  24679090 agtaggaggatgattcctaataaaggtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacagcttgtgctacggct 24679189  T
Q  299 tgtagtgcagcagccaatgctacgtcgtctct 330  Q
    |||||||||||||| || || || ||||||||    
T  24679190 tgtagtgcagcagctaacgcaacatcgtctct 24679221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 22741806 - 22741693
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  22741806 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggttgttgccccacagcttgagctacggct 22741707  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  22741706 tgtagtgcagcagc 22741693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 23030364 - 23030477
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||    
T  23030364 agtaggaggatgattcctcaaaaaggtatcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgtccaacagcttgagctacgact 23030463  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  23030464 tgtagtgcagcagc 23030477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 22732614 - 22732501
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||||||||| | ||||||||||   ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| ||    
T  22732614 agtaggaggatgattcctcagaaaggtctctagcatcctcacttcagcattcgcaccagcatttgcatcaggttgttgtcccacagcttaagctacgact 22732515  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||| ||||    
T  22732514 tgtagtgcatcagc 22732501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 23028302 - 23028189
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||| ||||||||||||||  ||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| |||    
T  23028302 agtagcaggatgattcctcatgaaggtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacagcttgagctacagct 23028203  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  23028202 tgtagtgcagcagc 23028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 20321584 - 20321717
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcacca------gcatttgcattaggctgttgtcccacaacttaagct 292  Q
    ||||||||||||||||||||| ||||| |  |||||||||| ||||||||||||||||      |||||||||||||| |||||||||||| ||||||||    
T  20321584 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcatttgcattaggttgttgtcccacagcttaagct 20321683  T
Q  293 acggcttgtagtgcagcagccaatgctacgtcgt 326  Q
    || ||||||||||||||||| || || |||||||    
T  20321684 actgcttgtagtgcagcagctaacgcaacgtcgt 20321717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 23104530 - 23104459
Alignment:
Q  241 ctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  23104530 ctcagcattcgcaccagcatttgcatttggctgttgtcccacaacttgagctacggcttgtagtgcagcagc 23104459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 23065978 - 23066091
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||| |||||||||||||||||||||| | ||||||||||   ||| || | ||||||||||| |||||||| |||||||||||| ||| ||||||||||    
T  23065978 agtaagaggatgattcctcagaaaggtctctagcatcctcacttcaacacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacggct 23066077  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  23066078 tgtagtgcagcagc 23066091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 23075428 - 23075541
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||| |||||||||||||||||||||| | ||||||||||   ||| || | ||||||||||| |||||||| |||||||||||| ||| ||||||||||    
T  23075428 agtaagaggatgattcctcagaaaggtctctagcatcctcacttcaacacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacggct 23075527  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  23075528 tgtagtgcagcagc 23075541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 21319839 - 21319730
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||||||||  || || | |||||||||||||||||||||| | ||| |||| | ||| ||||||||||||||| ||| |||||  ||||| |    
T  21319839 ggaggatgattcctcatgaaagtctctagcatcctcgtctcagcattcactccaacattcgtattcggctgttgtcccacagcttgagctatagcttgaa 21319740  T
Q  303 gtgcagcagc 312  Q
    ||||||||||    
T  21319739 gtgcagcagc 21319730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 23115866 - 23115815
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  23115866 catcctcgtctcagcattcgcaccagcatctgcattaggttgttgtcccaca 23115815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 24816679 - 24816591
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaactt 287  Q
    |||||||||||||||||||||||| ||||  | ||||||    || ||||| ||||||||||| |||||||||||||| ||||||||||    
T  24816679 agtaggaggatgattcctcagaaaagtttccaacatcctaacttcggcattagcaccagcattagcattaggctgttgccccacaactt 24816591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 24873560 - 24873481
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||  |  || |||||||||||||||||    
T  24873560 catcctagtctcagcattcgcaccagcatttgcgttaggttgttgtcccacagctt-gggaacagcttgtagtgcagcagc 24873481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 22462317 - 22462208
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||| | ||||||||||| ||||| |||||||||||| |||  || || |||||||    
T  22462317 ggaggatgatttctcatgaaggtctccaacatcctagtctcagcattcactccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgta 22462218  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  22462217 gagcagcagc 22462208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 24704322 - 24704268
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgca 253  Q
    ||||||||||||||||||||  || || | |||||||||||||||||||||||||    
T  24704322 agtaggaggatgattcctcatgaaagtctctagcatcctcgtctcagcattcgca 24704268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 22322136 - 22322072
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  22322136 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 22322072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 16932150 - 16932220
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  16932150 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 16932220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 41605883 - 41605813
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||||||||||| |||||||| ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  41605883 tcagcattcgcacccgcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 41605813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 24656465 - 24656385
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||| |||||||||||| || ||| ||| || ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  24656465 catcctagtctcagcattcacaacagtattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 24656385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 24713683 - 24713747
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||| ||||| |||||||| ||| |||  || || |||||||| ||||||||    
T  24713683 ttcgcaccagcatttgcgttaggttgttgtccgacagcttgggcaacagcttgtagagcagcagc 24713747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 935 - 822
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || | |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||    
T  935 agtaggaggatgattcctcagaaaagtctctagcatcctcatctcaacattcgcatcagcatttgcattaggctgttgtcccacagcttgagctacggct 836  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  835 tgtagtgcagcagc 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 15912 - 16025
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||| ||||||||||||||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||    
T  15912 agtaagaggatgattcctcagaaaagtctctagcatcctcgtctcagcattcgcaccaacatttgcattaggctgttatcccacagcttgagctacggct 16011  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  16012 tgtagtgcagcagc 16025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 16652 - 16539
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || | ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||    
T  16652 agtaggaggatgattcctcagaaaagtctctagcatcctcgtctcagtattcgcagcagcatttgcattaggctgttgtcccacagcttgagctacgact 16553  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  16552 tgtagtgcagcagc 16539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 22606 - 22719
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||| |||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||| |||    
T  22606 agtaggaggatgattcctcataaaggtctcaagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacagct 22705  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  22706 tgtagtgcagcagc 22719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 38030 - 38143
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||| |||||| |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||| |||||| |||    
T  38030 agtaggaggatgattcctcataaaggtctcaagcatcctcgtctccgcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacagct 38129  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  38130 tgtagtgcagcagc 38143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 36123 - 36010
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||| | |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  36123 agtaggaggatgattcctcatacaggtctcaagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacggct 36024  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  36023 tgtagtgcagcagc 36010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 294
Target Start/End: Original strand, 20097 - 20192
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctac 294  Q
    ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20097 agtaggaggatgattcctcaggaaggtctctagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttgagctac 20192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 19982005 - 19982116
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||| |||||| ||| ||||||||||    
T  19982005 agtaggaggatgattcctcagaaaggtttccagcatcctcgactcagcattcgcaccagcatttgcattaggctattgccccacagcttgagctacggct 19982104  T
Q  299 tgtagtgcagca 310  Q
     |||||||||||    
T  19982105 ggtagtgcagca 19982116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 18880400 - 18880287
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||| |||||||||||||||||||||| | |||||||||||  |||||| | ||||||||||||||||||||||||||||||||||||| |||||| |||    
T  18880400 agtatgaggatgattcctcagaaaggtctctagcatcctcgcttcagcacttgcaccagcatttgcattaggctgttgtcccacaacttgagctacagct 18880301  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  18880300 tgtagtgcagcagc 18880287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 21163273 - 21163160
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||| ||||||||||| |||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||    
T  21163273 agtaggagaatgattcctcataaaggtctcaagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgccccatagcttgagctacggct 21163174  T
Q  299 tgtagtgcagcagc 312  Q
    || |||||||||||    
T  21163173 tgcagtgcagcagc 21163160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 21390635 - 21390522
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||| |||| ||||||||||| ||||| |  |||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  21390635 agtaagagggtgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccatcatttgcattaggctgttgtcccacagcttgagctacggct 21390536  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  21390535 tgtagtgcagcagc 21390522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 21779961 - 21779848
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||| |||| ||||||||||| ||||| |  |||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  21779961 agtaagagggtgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccatcatttgcattaggctgttgtcccacagcttgagctacggct 21779862  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  21779861 tgtagtgcagcagc 21779848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 6518411 - 6518521
Alignment:
Q  202 aggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgt 301  Q
    ||||||||||||||||||||| || | |||||||||||  |||||||| ||||||||||| ||||||||||| ||||||||| ||| ||| |||||||||    
T  6518411 aggaggatgattcctcagaaaagtctctagcatcctcgcttcagcatttgcaccagcattcgcattaggctgctgtcccacagcttgagccacggcttgt 6518510  T
Q  302 agtgcagcagc 312  Q
    |||||||||||    
T  6518511 agtgcagcagc 6518521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 21672555 - 21672666
Alignment:
Q  201 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 300  Q
    |||||||||||||||||| ||| || | ||||||||||   ||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||  ||||    
T  21672555 taggaggatgattcctcataaaagtctctagcatcctcacttcatcattcgcaccagcatttgcattaggctgttgtcccacagcttgagccacaacttg 21672654  T
Q  301 tagtgcagcagc 312  Q
    ||||||||||||    
T  21672655 tagtgcagcagc 21672666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 326
Target Start/End: Complemental strand, 22420636 - 22420509
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || |  | |||||||  ||||||||| ||||||||||| ||||||||||| || |||||| ||| ||| ||  ||    
T  22420636 agtaggaggatgattcctcagaaaagtctccaacatcctcacctcagcattagcaccagcattagcattaggctgatgccccacagcttgagccacaact 22420537  T
Q  299 tgtagtgcagcagccaatgctacgtcgt 326  Q
    | ||||||| |||| | ||| |||||||    
T  22420536 tctagtgcaacagcaattgcaacgtcgt 22420509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 17354641 - 17354579
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 261  Q
    |||||||||||||||||||| |||||| |  |||||||||| |||||||||||||||||||||    
T  17354641 agtaggaggatgattcctcataaaggtcttaagcatcctcgactcagcattcgcaccagcatt 17354579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 17829680 - 17829600
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||| ||||||||| || ||||||||||||||||||| |||||||||||| |||  || || |||||||| ||||||||    
T  17829680 catcctagtctcagcagtcacaccagcatttgcattaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 17829600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 22116878 - 22116808
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  22116878 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 22116808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 15537425 - 15537534
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||| | ||| ||||||||||||| |||||||||||| |||  || || |||||||    
T  15537425 ggaggatgatttctcatgaaggtctccaacatcctagtctcagcattcactccaacatttgcattaggttgttgtcccacagcttgggcaacagcttgta 15537524  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  15537525 gagcagcagc 15537534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 32604187 - 32604296
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||| ||||  ||||| |  | |||||| ||||||||| || ||||| ||||||||||||| |||||||||||| |||  || || |||||||    
T  32604187 ggaggatgatttctcatgaaggtctccaacatcctagtctcagcagtcacaccaacatttgcattaggttgttgtcccacagcttgggcaacagcttgta 32604286  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  32604287 gagcagcagc 32604296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 22125662 - 22125592
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  22125662 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 22125592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 30309883 - 30309774
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||| |||||||||| || ||||| |||||||||||| |||  || ||  ||||||    
T  30309883 ggaggatgatttctcatgaaggtctccaacatcctggtctcagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgta 30309784  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  30309783 gagcagcagc 30309774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 17670719 - 17670655
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  17670719 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 17670655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 281
Target Start/End: Original strand, 18860655 - 18860694
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtccca 281  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  18860655 tcagcattcgcaccagcatttgcgttaggttgttgtccca 18860694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 22043860 - 22043940
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    ||||||||||||||||  ||||| | || ||| || |||||| | ||| ||||| ||||||| ||||| ||||||||||||    
T  22043860 ggaggatgattcctcatgaaggtctctaacattctagtctcaacgttcacaccaacatttgcgttaggttgttgtcccaca 22043940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 6305 - 6192
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||    
T  6305 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggttgttgtcccacagcttgagctacagct 6206  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  6205 tgtagtgcagcagc 6192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 9425 - 9538
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||| |||||||  |||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  9425 agtaggaggatgattcctcaggaaggtttccagcatcctcgactcagcattcccaccagcatttgcattaggctgttgccccacagcttgagctacggct 9524  T
Q  299 tgtagtgcagcagc 312  Q
    |||| |||||||||    
T  9525 tgtaatgcagcagc 9538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 65833 - 65720
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||| ||||||||||||||| |||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  65833 agtaagaggatgattcctcataaaggtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgccccacagcttgagctacggct 65734  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  65733 tgtagtgcagcagc 65720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 16241150 - 16241037
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||||||||| | |||||||||||  |||||| | |||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  16241150 agtaggaggatgattcctcagaaaggtctctagcatcctcgcttcagcacttgcaccagcatttgcatcaggctgttgtcccacagcttgagctacggct 16241051  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  16241050 tgtagtgcagcagc 16241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 15143989 - 15143878
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||| | |||| |||    
T  15143989 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcacaccagcatttgcattaggctgttgccccacagcttgatctacagct 15143890  T
Q  299 tgtagtgcagca 310  Q
    ||||||||||||    
T  15143889 tgtagtgcagca 15143878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 15077 - 14964
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| |||| ||||||||||   |||||||| |||||||||||||||  |||||| ||||||||||||| ||||||  ||    
T  15077 agtaggaggatgattcctcagaaaagtttctagcatcctcacttcagcattagcaccagcatttgcagcaggctgatgtcccacaacttgagctacaact 14978  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||| ||||    
T  14977 tctagtgcaacagc 14964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 16349841 - 16349729
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 299  Q
    |||||||||||||||||||  || || |  ||||||||||||||||||||| ||||| |||| |||||||| | ||| |||||| ||| |||||||||||    
T  16349841 gtaggaggatgattcctcatgaaagtctcgagcatcctcgtctcagcattcacaccaacattcgcattaggttattgccccacagcttgagctacggctt 16349742  T
Q  300 gtagtgcagcagc 312  Q
    ||||| |||||||    
T  16349741 gtagttcagcagc 16349729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 14163443 - 14163555
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 299  Q
    ||||||||||||||||||||||| ||||  |||||||||   |||||||| |||||  |||| |||||||| ||||| |||||| ||| ||| || ||||    
T  14163443 gtaggaggatgattcctcagaaaagtttccagcatcctcacttcagcattagcacccacattcgcattaggttgttgccccacagcttgagcaacagctt 14163542  T
Q  300 gtagtgcagcagc 312  Q
    | |||||||||||    
T  14163543 gcagtgcagcagc 14163555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 14299979 - 14299909
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  14299979 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 14299909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 18223510 - 18223401
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||  ||||||||||||| ||||| |||||||||||| |||  || || |||||||    
T  18223510 ggaggatgatttctcatgaaggtctccaacatcctggtctcagcatttacaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgta 18223411  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  18223410 gagcagcagc 18223401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 12480612 - 12480682
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||||| |||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  12480612 tcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 12480682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 16247712 - 16247603
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||| ||||  ||||| |  | |||||| ||| |||||||  ||||||||||||| ||||| |||||||||||| |||  || || |||||||    
T  16247712 ggaggatgatttctcatgaaggtctccaacatcctagtcccagcatttacaccagcatttgcgttagggtgttgtcccacagcttgggcaacagcttgta 16247613  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  16247612 gagcagcagc 16247603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 40477052 - 40477093
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  40477052 tcagcattcgcaccagcatttgcgttaggttgttgtcccaca 40477093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 47271105 - 47271210
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    |||||||||||||||||| | |||||  ||||||||| |||| ||||||||| || |||||   ||| ||| |||||||||||||   ||| |||||||     
T  47271105 gagactccaagaagatcatcgagaattgttgagaaggtcaaggcagctcctccagcagagccaaaaactgacccccctaagaaacgtagcagaaagtcat 47271204  T
Q  123 cagctt 128  Q
    ||||||    
T  47271205 cagctt 47271210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 47280834 - 47280939
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    |||||||||||||||||| | |||||  ||||||||| |||| ||||||||| || |||||   ||||||| || ||||||||||   ||| |||||||     
T  47280834 gagactccaagaagatcatcgagaattgttgagaaggtcaaggcagctcctccagcagagccaaaaagtgacccacctaagaaacgtagcagaaagtcat 47280933  T
Q  123 cagctt 128  Q
    ||||||    
T  47280934 cagctt 47280939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 23959765 - 23959829
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  23959765 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 23959829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 22459452 - 22459339
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||  ||||| |  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  22459452 agtaggaggatgattcctcaagaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacggct 22459353  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  22459352 tgtagtgcagcagc 22459339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 22469881 - 22469768
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||  ||||| |  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  22469881 agtaggaggatgattcctcaagaaggtctcaagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgccccacagcttgagctacggct 22469782  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  22469781 tgtagtgcagcagc 22469768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 22832531 - 22832418
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||| ||| || |  ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  22832531 agtaggaggatgattcctcataaaagtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggttgttgccccacagcttgagctacggct 22832432  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  22832431 tgtagtgcagcagc 22832418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 22435115 - 22435031
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    |||||||||||||||||| | ||| || |   |||||||||||||||||||| |||||||||||||||| |||||||| ||||||    
T  22435115 agtaggaggatgattcctaataaaagtctcgcgcatcctcgtctcagcattcacaccagcatttgcattgggctgttgccccaca 22435031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 21753004 - 21753085
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtccc 280  Q
    |||||||||||||||||||||||| || | |||||||||||  ||| || | || |||||||| ||||||||||||||||||    
T  21753004 agtaggaggatgattcctcagaaaagtctctagcatcctcgcttcaacacttgctccagcattcgcattaggctgttgtccc 21753085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 24784194 - 24784121
Alignment:
Q  239 gtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||| |||| ||||||||||||| ||||| |||||||||||| |||| || || |||||||| ||||||||    
T  24784194 gtctcagtattcacaccagcatttgcgttaggttgttgtcccacagcttaggcaacagcttgtagagcagcagc 24784121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 20247207 - 20247318
Alignment:
Q  201 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 300  Q
    |||||||||||||||||| |||  | |  | ||||||||  |||||| | || |||||||| ||||||||||||||||||||| ||| ||| ||  | ||    
T  20247207 taggaggatgattcctcacaaaactctccaacatcctcgcttcagcacttgctccagcattcgcattaggctgttgtcccacagcttgagccacaacatg 20247306  T
Q  301 tagtgcagcagc 312  Q
    ||||||||||||    
T  20247307 tagtgcagcagc 20247318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 16346926 - 16346856
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||||| |||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  16346926 tcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 16346856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 16353575 - 16353505
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||||| |||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  16353575 tcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 16353505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 33387355 - 33387291
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  33387355 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 33387291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 51329818 - 51329754
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||  ||||||||    
T  51329818 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtatagcagcagc 51329754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 12264 - 12391
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||||||||| | |||||||||||  |||||| | ||||||||||| |||||||||| |||||||||| ||| ||||||||||    
T  12264 agtaggaggatgattcctcagaaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctattgtcccacagcttgagctacggct 12363  T
Q  299 tgtagtgcagcagccaatgctacgtcgt 326  Q
    |||||||||||||| || || |||||||    
T  12364 tgtagtgcagcagctaacgcaacgtcgt 12391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 15085 - 15198
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||| |||||||||||||| | |||||||||||  |||||| | ||||||| ||| |||||||| |||||||||||| ||| | ||||||||    
T  15085 agtaggaggatggttcctcagaaaggtctctagcatcctcgcttcagcacttgcaccagaattcgcattaggttgttgtcccacagcttgacctacggct 15184  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  15185 tgtagtgcagcagc 15198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 31288 - 31401
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||  |||||||  |||||| ||| || ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  31288 agtaggaggatgattcctcaagaaggtttccagcatcttcgacttagcattcgcactagcatttgcattaggctgttgtcccacagcttgagctacggct 31387  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  31388 tgtagtgcagcagc 31401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 21883681 - 21883794
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||  |||||||  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||  ||||||||     
T  21883681 agtaggaggatgattcctcatgaaggtttccagcatcctcgactcagcattcgcaccagcatttgcattaggctgttgccccacagcttgtgctacggcc 21883780  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  21883781 tgtagtgcagcagc 21883794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 25430324 - 25430437
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||||||   |||||||||||  |||||| | ||||||||||| |||||||| |||||||||||| ||| |||||| |||    
T  25430324 agtaggaggatgattcctcagaaaggtccctagcatcctcgcttcagcacttgcaccagcattcgcattaggttgttgtcccacagcttgagctacagct 25430423  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  25430424 tgtagtgcagcagc 25430437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 20804503 - 20804614
Alignment:
Q  201 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 300  Q
    ||||||||||||||||||  ||||| |   |||||||||||||||||||| | |||||||| ||||||||||||||||||| |  || |||||| |||||    
T  20804503 taggaggatgattcctcatgaaggtctcgtgcatcctcgtctcagcattcactccagcattcgcattaggctgttgtcccataggttgagctacagcttg 20804602  T
Q  301 tagtgcagcagc 312  Q
    || |||||||||    
T  20804603 tactgcagcagc 20804614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 22351853 - 22351933
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||||||||||||    
T  22351853 catcctagtctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagtgcagcagc 22351933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 23536693 - 23536584
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||||||||  ||||| |  | |||||| |||||||||||| |||||||||| || ||||| |||||||||||| |||  || || |||||||    
T  23536693 ggaggatgattcctcatgaaggtctccaacatcctggtctcagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgta 23536594  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  23536593 gagcagcagc 23536584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 29472515 - 29472445
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||| || || |||||||  ||||||||    
T  29472515 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttaggcaacagcttgtaaagcagcagc 29472445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 18783051 - 18783131
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||| |||||||| ||| ||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  18783051 catcctagtctcagcgttcacaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 18783131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 22138612 - 22138682
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  22138612 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 22138682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 22329329 - 22329259
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||  ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  22329329 tcagcattcgcaccagcatttgtgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 22329259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 27681842 - 27681772
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  27681842 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 27681772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 14996181 - 14996140
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  14996181 tcagcattcgcaccagcatttgcgttaggttgttgtcccaca 14996140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 41774793 - 41774857
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  41774793 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 41774857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 23461812 - 23461870
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 261  Q
    ||||||||||||||||  ||||| |  ||||||||||||||||||||| | ||||||||    
T  23461812 ggaggatgattcctcatgaaggtctcaagcatcctcgtctcagcattcactccagcatt 23461870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 27614300 - 27614370
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  27614300 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 27614370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 37287938 - 37287896
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaa 284  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||    
T  37287938 tcagcgttcgcaccagcatttgcgttaggttgttgtcccacaa 37287896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 21560446 - 21560397
Alignment:
Q  263 gcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||| ||||||||||||||||||| |||||| ||||  |||||||||||    
T  21560446 gcattcggctgttgtcccacaacttgagctacagcttcaagtgcagcagc 21560397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 26733976 - 26733863
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||| |||||||||| ||| || |  | |||||||   |||||||| ||||||||||| ||||||||||| ||||| ||| ||| ||| |   ||    
T  26733976 agtaggaggttgattcctcataaaagtctccaacatcctcacttcagcatttgcaccagcattagcattaggctgatgtcctacagcttgagccaaaact 26733877  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||||||||    
T  26733876 tctagtgcagcagc 26733863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 11861943 - 11862056
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||  ||||| |  ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||  |||||||||    
T  11861943 agtaggaggatgattcctcatgaaggtctcaagcatcctcgtctcagcattcactccagcatttgcattaggctgttgtcccacagcttgggctacggct 11862042  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  11862043 tgtagtgcagcagc 11862056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 23078549 - 23078436
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||| ||| || |  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  |||||||||    
T  23078549 agtaggaggatgattcctcataaaagtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgtcccacgacttgtgctacggct 23078450  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||||||||    
T  23078449 tatagtgcagcagc 23078436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 17498282 - 17498395
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||| |||||||||||| | ||||||||||   ||| || |  |||||||||| |||||||||||| |||||||||||| ||||||||||    
T  17498282 agtaggaggatgatccctcagaaaggtctctagcatcctcccttcaacacttccaccagcattcgcattaggctgtcgtcccacaacttgagctacggct 17498381  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  17498382 tgtagtgcagcagc 17498395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 14873124 - 14873006
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||  ||||  | | ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  14873124 agtaggaggatgattcctcgtaaagtctca-agcatcctcgtctcagcattcacaccagcatttgcattaggttgttgccccacagcttgagctacggct 14873026  T
Q  299 tgtagtgcagcagccaatgc 318  Q
    ||||||  |||||| |||||    
T  14873025 tgtagtttagcagctaatgc 14873006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 15458965 - 15458852
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||| ||||||| | |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| ||| ||| |||||| |||    
T  15458965 agtaggaggatgattcctccgaaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgatgtccaacagcttgagctacagct 15458866  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||||||||    
T  15458865 tctagtgcagcagc 15458852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 312
Target Start/End: Complemental strand, 14577955 - 14577847
Alignment:
Q  204 gaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtag 303  Q
    ||||||||||||||| ||| || | ||||||||||   |||||||| ||||| ||||| ||||||||||||||||||||| ||| ||| || ||||  ||    
T  14577955 gaggatgattcctcaaaaaagtctctagcatcctcacatcagcatttgcacccgcattagcattaggctgttgtcccacagcttgagcaacagcttccag 14577856  T
Q  304 tgcagcagc 312  Q
    |||||||||    
T  14577855 tgcagcagc 14577847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 12890340 - 12890410
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||||||||||||    
T  12890340 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagtgcagcagc 12890410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 16695760 - 16695866
Alignment:
Q  204 gaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtag 303  Q
    |||||||||||||||  ||||| |  | |||||| |||||||||||| ||||||||||||| ||||| |||||||||||| |||  || || ||||||||    
T  16695760 gaggatgattcctcatgaaggtctccaacatcctggtctcagcattcacaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtag 16695859  T
Q  304 tgcagca 310  Q
     ||||||    
T  16695860 agcagca 16695866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 23414325 - 23414216
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||||||||  ||||| |  | |||||| |||||||||||| ||||||||||||| ||||| |||||||||||| | |  || || |||||||    
T  23414325 ggaggatgattcctcatgaaggtctccaacatcctggtctcagcattcacaccagcatttgcgttaggttgttgtcccacagcatgggcaacagcttgta 23414226  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  23414225 gagcagcagc 23414216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 3689574 - 3689644
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||||| |||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  3689574 tcagcatttgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 3689644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 10009237 - 10009307
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagccaatgc 318  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| |||||||| |||||    
T  10009237 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagctaatgc 10009307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 12502488 - 12502550
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 261  Q
    ||||||||||||||||||||  || || |  ||||||||||||||||||||| ||||||||||    
T  12502488 agtaggaggatgattcctcatgaaagtctcaagcatcctcgtctcagcattcacaccagcatt 12502550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 15066660 - 15066721
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 261  Q
    |||||||||||||||||||  || || |  ||||||||||||||||||||| ||||||||||    
T  15066660 gtaggaggatgattcctcatgaaagtctcaagcatcctcgtctcagcattcacaccagcatt 15066721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 15344738 - 15344674
Alignment:
Q  248 ttcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  15344738 ttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 15344674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 24186774 - 24186854
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||  |||||||||| || ||||| |||||| ||||| |||  || || |||||||| ||||||||    
T  24186774 catcctcgtctcagcattaacaccagcattcgcgttaggttgttgttccacagcttgggcaacagcttgtagagcagcagc 24186854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 6604366 - 6604436
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||||| |||||||||||  | ||||| ||||||||||||||||  || || |||||||| ||||||||    
T  6604366 tcagcatttgcaccagcattcacgttaggttgttgtcccacaacttgggcaacagcttgtagagcagcagc 6604436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 15359681 - 15359751
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  15359681 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 15359751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 15399018 - 15398948
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  15399018 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 15398948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 16753200 - 16753130
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  16753200 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 16753130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 20058553 - 20058483
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||  | ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  20058553 tcagcattcgcaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 20058483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 433 - 545
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 299  Q
    |||||||||||||||||||  ||||| |  ||||||||||||||||||||| |||||||||| |||||||||||||| |||||| ||| |||||||||||    
T  433 gtaggaggatgattcctcatgaaggtctcaagcatcctcgtctcagcattcacaccagcattcgcattaggctgttgccccacagcttgagctacggctt 532  T
Q  300 gtagtgcagcagc 312  Q
    |||||||||||||    
T  533 gtagtgcagcagc 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 121471 - 121358
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||  || || |  ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||| |||    
T  121471 agtaggaggatgattcctcatgaaagtctcaagcatcctcgtctcagcattcacaccagcattcgcattaggctgttgtcccacagcttgagctacagct 121372  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  121371 tgtagtgcagcagc 121358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 69; Significance: 6e-31; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 32881 - 32993
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 299  Q
    ||||||||||||||||| | ||| || |  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  32881 gtaggaggatgattccttaaaaaagtctcaagcatcctcgtctcagcattcacaccagcatttgcattaggctgttgccccacagcttgagctacggctt 32980  T
Q  300 gtagtgcagcagc 312  Q
    || ||||||||||    
T  32981 gtcgtgcagcagc 32993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 21025 - 20912
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||| ||||| || | ||||||||||   |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||  ||    
T  21025 agtaggaggatgattcctaagaaaagtctctagcatcctcacttcagcatttgcaccagcatttgcattaggctgatgtcccacaacttgagctacaact 20926  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||| ||||    
T  20925 tttagtgcaacagc 20912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 55639 - 55721
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtccca 281  Q
    |||||||||||||||||| || |||||||  |||||||||| |  ||||||||||||||||||||||||||| ||||||||||    
T  55639 agtaggaggatgattccttaggaaggtttcaagcatcctcgacaaagcattcgcaccagcatttgcattaggttgttgtccca 55721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 9215 - 9326
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||| |||||| |||||| | |||||||||| |||||||| || ||||||||||||||||||||  |||||||||| ||| ||||||||||    
T  9215 agtaggaggatgagtcctcataaaggtctctagcatcctcatctcagcagtcacaccagcatttgcattaggccattgtcccacagcttgagctacggct 9314  T
Q  299 tgtagtgcagca 310  Q
    ||||||||||||    
T  9315 tgtagtgcagca 9326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 107037 - 106967
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  107037 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 106967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 34075 - 33964
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||| | |||| |||    
T  34075 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcagcattcacaccagcatttgcattaggctgttgccccacagcttgatctacagct 33976  T
Q  299 tgtagtgcagca 310  Q
    ||||||||||||    
T  33975 tgtagtgcagca 33964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 42633 - 42717
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    |||||||||||| ||||||||||| || | ||||||||||   |||||||| |||||| |||||||||||||||| ||| |||||    
T  42633 agtaggaggatggttcctcagaaaagtctctagcatcctcacttcagcattagcaccaacatttgcattaggctgatgtaccaca 42717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 76353 - 76437
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    |||||||||||| ||||||||||| || | ||||||||||   |||||||| |||||| |||||||||||||||| ||| |||||    
T  76353 agtaggaggatggttcctcagaaaagtctctagcatcctcacttcagcattagcaccaacatttgcattaggctgatgtaccaca 76437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 240 - 353
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||| ||||| |  |||||||||| |||| ||||| ||||||||||||||||||| ||||| |||||| ||| ||||||| ||    
T  240 agtaggaggatgattcctcaggaaggtctcaagcatcctcgactcatcattcacaccagcatttgcattaggttgttgccccacagcttgagctacgact 339  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  340 tgtagtgcagcagc 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 41314 - 41201
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || | |||||||||||  |||||| | ||||||||||| |||||||||||||| |||||| ||| ||| ||||||    
T  41314 agtaggaggatgattcctcagaaaagtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgttgccccacagcttgagcgacggct 41215  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  41214 tgtagtgcagcagc 41201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 201 - 330
Target Start/End: Complemental strand, 194169 - 194040
Alignment:
Q  201 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 300  Q
    |||||||||||||||||||||| || |  |||||||||| ||  |||||||| |||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  194169 taggaggatgattcctcagaaaagtctcaagcatcctcgacttggcattcgctccagcattcgcattaggctgttgtcctacaacttgagctatggcttg 194070  T
Q  301 tagtgcagcagccaatgctacgtcgtctct 330  Q
    |||||||||||| || || || ||||||||    
T  194069 tagtgcagcagctaacgcaacatcgtctct 194040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 20887 - 20772
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||||||||  || || || | ||| || |||||||||||| ||||||||||||| ||||| ||||| |||||| ||| |||||| |||||||    
T  20887 ggaggatgattcctcatgaaagtctacaacattcttgtctcagcattcacaccagcatttgcgttaggttgttgccccacagcttgagctacagcttgta 20788  T
Q  303 gtgcagcagccaatgc 318  Q
    |||||||||| |||||    
T  20787 gtgcagcagctaatgc 20772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 16329 - 16250
Alignment:
Q  239 gtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagccaatgc 318  Q
    |||||||||||| ||||||||||||| ||||| ||||| |||||| ||| |||||| ||||||||||||||||| |||||    
T  16329 gtctcagcattcacaccagcatttgcgttaggttgttgccccacagcttgagctacagcttgtagtgcagcagctaatgc 16250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 23528 - 23416
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 299  Q
    |||||||||||||||||||  || || | |||||||||||||||||||||| |||||||||| |||||||| ||||| |||||| ||| |||||| ||||    
T  23528 gtaggaggatgattcctcatgaaagtctctagcatcctcgtctcagcattcacaccagcattcgcattaggttgttgccccacatctttagctacagctt 23429  T
Q  300 gtagtgcagcagc 312  Q
    |||||||||||||    
T  23428 gtagtgcagcagc 23416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 1018 - 1131
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| | | ||||||||| |||||||||||||| |||||| ||| ||| |||||     
T  1018 agtaggaggatgattcctcagaaaagtctatagcatcctcgcttcagcacttgaaccagcattcgcattaggctgttgccccacagcttgagccacggcc 1117  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  1118 tgtagtgcagcagc 1131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 5435 - 5548
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| | | ||||||||| |||||||||||||| |||||| ||| ||| |||||     
T  5435 agtaggaggatgattcctcagaaaagtctatagcatcctcgcttcagcacttgaaccagcattcgcattaggctgttgccccacagcttgagccacggcc 5534  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  5535 tgtagtgcagcagc 5548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 49644 - 49535
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||||||||||||||| |  |||||||||   ||||||||||||||||||||  ||||||||||||| |||||| ||| ||||||||||||||    
T  49644 ggaggatgattcctcagaaaggtctccagcatcctcacttcagcattcgcaccagcattcacattaggctgttgccccacagcttgagctacggcttgta 49545  T
Q  303 gtgcagcagc 312  Q
     |||||||||    
T  49544 atgcagcagc 49535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 14889 - 14778
Alignment:
Q  201 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 300  Q
    ||||||||||||||||||  ||||| |  || |||| ||||||||||||| |||||||||| |||||||||||||| |||||| ||| ||||||| ||||    
T  14889 taggaggatgattcctcatgaaggtctcaagaatccacgtctcagcattcacaccagcattcgcattaggctgttgccccacagcttgagctacgacttg 14790  T
Q  301 tagtgcagcagc 312  Q
    ||||||||||||    
T  14789 tagtgcagcagc 14778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 200 - 318
Target Start/End: Original strand, 738 - 856
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 299  Q
    |||||||||||||||||||  || || |  | ||||||||||||||||||| |||||||||| |||||||| ||||| |||||| ||| |||||| ||||    
T  738 gtaggaggatgattcctcatgaaagtctccaacatcctcgtctcagcattcacaccagcattcgcattaggttgttgccccacagcttgagctacagctt 837  T
Q  300 gtagtgcagcagccaatgc 318  Q
    ||||||||||||| |||||    
T  838 gtagtgcagcagctaatgc 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 54775 - 54662
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| |||| ||||||||||   |||||||| |||||||||||||||  |||||| ||||||||||||| ||||||  ||    
T  54775 agtaggaggatgattcctcagaaaagtttctagcatcctcacttcagcattagcaccagcatttgcagcaggctgatgtcccacaacttgagctacaact 54676  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||| ||||    
T  54675 tctagtgcaacagc 54662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 3226 - 3339
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||| ||||||| | |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| ||| ||| |||||| |||    
T  3226 agtaggaggatgattcctccgaaaggtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggctgatgtccaacagcttgagctacagct 3325  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||||||||    
T  3326 tctagtgcagcagc 3339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 394 - 282
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 299  Q
    |||||||||||||||||||  || || | |||||||||||||||||||||| | |||||||| |||||||| ||||| |||| | ||| |||||| ||||    
T  394 gtaggaggatgattcctcatgaaagtctctagcatcctcgtctcagcattcactccagcattcgcattaggttgttgccccatagcttgagctacagctt 295  T
Q  300 gtagtgcagcagc 312  Q
    |||||||||||||    
T  294 gtagtgcagcagc 282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 326
Target Start/End: Complemental strand, 3850 - 3723
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || | |||||||||||  ||| || | ||||||||||| |||||||| ||||| |||||| ||| ||| |||||     
T  3850 agtaggaggatgattcctcagaaaagtctctagcatcctcgcttcaacacttgcaccagcattcgcattaggttgttgccccacagcttgagccacggcc 3751  T
Q  299 tgtagtgcagcagccaatgctacgtcgt 326  Q
    |||||||||||||| || || |||||||    
T  3750 tgtagtgcagcagctaacgcaacgtcgt 3723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 4552 - 4665
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| |  | |||||||||||  |||| | | ||||||||||| |||||||||||||| |||||| ||| ||| |||||     
T  4552 agtaggaggatgattcctcagaaaagactgtagcatcctcgcttcagtacttgcaccagcattcgcattaggctgttgccccacagcttgagccacggcc 4651  T
Q  299 tgtagtgcagcagc 312  Q
    ||||||||||||||    
T  4652 tgtagtgcagcagc 4665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 14043656 - 14043769
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| ||||||| |||||||   |||||||| ||| ||||||||||||||||||| ||||||||| ||| ||| ||  ||    
T  14043656 agtaggaggatgattcctcagaaaagtttataacatcctcacatcagcatttgcatcagcatttgcattaggctgatgtcccacagcttgagccacaact 14043755  T
Q  299 tgtagtgcagcagc 312  Q
    | | ||||||||||    
T  14043756 tctcgtgcagcagc 14043769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 14353686 - 14353799
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| ||||||| |||||||   |||||||| ||| ||||||||||||||||||| ||||||||| ||| ||| ||  ||    
T  14353686 agtaggaggatgattcctcagaaaagtttataacatcctcacatcagcatttgcatcagcatttgcattaggctgatgtcccacagcttgagccacaact 14353785  T
Q  299 tgtagtgcagcagc 312  Q
    | | ||||||||||    
T  14353786 tctcgtgcagcagc 14353799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 15145230 - 15145119
Alignment:
Q  201 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 300  Q
    |||||||||||||||||||||| || | ||||||||||   ||||||||  ||||||||||  ||  |||||| ||||| ||| ||| |||||| ||||     
T  15145230 taggaggatgattcctcagaaacgtctctagcatcctcacttcagcatttacaccagcattcccaacaggctgatgtcctacagcttgagctacagcttc 15145131  T
Q  301 tagtgcagcagc 312  Q
    ||||||||||||    
T  15145130 tagtgcagcagc 15145119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 13690042 - 13690112
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  13690042 tcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 13690112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 11549381 - 11549301
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||  |||||||||| || ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  11549381 catcctcgtctcagcattaacaccagcattcgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 11549301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 11233482 - 11233412
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||| |||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  11233482 tcagtattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 11233412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 15157326 - 15157256
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||| ||||||||||||||||| ||||| |||||||||||| |||  || || |||||||| ||||||||    
T  15157326 tcagcgttcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacagcttgtagagcagcagc 15157256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 11526666 - 11526574
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagc 291  Q
    |||||||||||||||||||||||| || |  | |||||||   |||||||| |||||| | || ||||||||||| || |||||| |||||||    
T  11526666 agtaggaggatgattcctcagaaaagtctccaacatcctcacttcagcattagcaccaacgttagcattaggctgatgccccacagcttaagc 11526574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 318
Target Start/End: Original strand, 14958499 - 14958585
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagccaatgc 318  Q
    ||||||||||||||||||  ||||||||||  | ||||| |||||||||||| |||  || || |||||||| | |||||| |||||    
T  14958499 catcctcgtctcagcattaacaccagcattcacgttaggttgttgtcccacagcttgggcaacagcttgtagagtagcagctaatgc 14958585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 37440 - 37552
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggctt 299  Q
    |||||||||||||||||||  || || |  ||||||||||||||||||||| ||||| |||| |||||||| | ||| |||||| ||| |||||||||||    
T  37440 gtaggaggatgattcctcatgaaagtctcgagcatcctcgtctcagcattcacaccaacattcgcattaggttattgccccacagcttgagctacggctt 37539  T
Q  300 gtagtgcagcagc 312  Q
    ||||| |||||||    
T  37540 gtagttcagcagc 37552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 309
Target Start/End: Complemental strand, 7455 - 7345
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| ||||  | |||||||   |||||||| |||||| ||||| |||||||||| ||||||||| ||| |||||| |||    
T  7455 agtaggaggatgattcctcagaaaagtttccaacatcctcacttcagcattagcaccaacattttcattaggctgatgtcccacagcttgagctacagct 7356  T
Q  299 tgtagtgcagc 309  Q
    | |||||||||    
T  7355 tctagtgcagc 7345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 2713 - 2826
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||| |||||||| || |  |||||||||   |||||||| |||||||||||||||  |||||| ||||||||| ||| |||||| |||    
T  2713 agtaggaggatgatttctcagaaaagtctcaagcatcctcacttcagcattagcaccagcatttgcagcaggctgatgtcccacagcttgagctacagct 2812  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||||||||    
T  2813 tctagtgcagcagc 2826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 15915 - 15802
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || | |||||||||||  |||||| | ||||||||||| |||||||| ||||| |||||| ||| ||| ||| |     
T  15915 agtaggaggatgattcctcagaaaagtctctagcatcctcgcttcagcacttgcaccagcattcgcattaggttgttgccccacagcttgagccacgacc 15816  T
Q  299 tgtagtgcagcagc 312  Q
    ||| ||||||||||    
T  15815 tgttgtgcagcagc 15802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 854 - 963
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||||||||  ||||| |  | |||||| ||||||||| || |||| |||||||||||||| |||||| ||||| |||  || || |||||||    
T  854 ggaggatgattcctcatgaaggtctccaacatcctagtctcagcagtcacacccgcatttgcattaggttgttgttccacagcttgggcaacagcttgta 953  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  954 gagcagcagc 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 138862 - 138789
Alignment:
Q  239 gtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||| || ||||||||||||||||||  |||||||||||| |||  || || |||||||| ||||||||    
T  138862 gtctcagcagtcacaccagcatttgcattagattgttgtcccacagcttgggcaacagcttgtagagcagcagc 138789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 12491 - 12563
Alignment:
Q  240 tctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||| || || |||||||||||||||||    
T  12491 tctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttaggcaacagcttgtagtgcagcagc 12563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 22019 - 22091
Alignment:
Q  240 tctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||  || ||  ||||||||||||||||    
T  22019 tctcagcattcgcaccagcatttgcgttaggttgttgtcccacagcttgggcaacaacttgtagtgcagcagc 22091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 56035 - 56115
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||| |||||||||| ||||||||||| || || || |||||||||||| |||  || || |||||||  ||||||||    
T  56035 catcctcatctcagcatttgcaccagcattcgcgttgggttgttgtcccacagcttgggcaacagcttgtaaagcagcagc 56115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 39900 - 39787
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||| |||||||| | |||||||||||  |||||| | ||||||||||||| |  |||||| ||||| ||| ||| |||||| |||    
T  39900 agtaggaggatgattccttagaaaggtctctagcatcctcgcttcagcacttgcaccagcatttgaaccaggctgatgtccaacagcttgagctacagct 39801  T
Q  299 tgtagtgcagcagc 312  Q
    | ||||||| ||||    
T  39800 tctagtgcatcagc 39787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 1316 - 1203
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || |  | |||||||   |||||||| ||||||||||||||||||||||| || || ||| ||| ||| || |||    
T  1316 agtaggaggatgattcctcagaaaagtatccaacatcctcacttcagcattagcaccagcatttgcattaggctgatgccctacagcttgagccacagct 1217  T
Q  299 tgtagtgcagcagc 312  Q
    | | ||||||||||    
T  1216 tctggtgcagcagc 1203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 4180 - 4067
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    |||||||||||||||||||||||| || |  | |||||||   |||||||| ||||||||||||||||||||||| || || ||| ||| ||| || |||    
T  4180 agtaggaggatgattcctcagaaaagtatccaacatcctcacttcagcattagcaccagcatttgcattaggctgatgccctacagcttgagccacagct 4081  T
Q  299 tgtagtgcagcagc 312  Q
    | | ||||||||||    
T  4080 tctggtgcagcagc 4067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 11406 - 11478
Alignment:
Q  240 tctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||||||||||||| ||||| | |||||||||| |||  || || |||||||||||||||||    
T  11406 tctcagcattcgcaccagcatttgcgttaggttattgtcccacagcttgggcaacagcttgtagtgcagcagc 11478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 8653 - 8565
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaactt 287  Q
    |||||||||||||||||||||||| ||||  | ||||||    || ||||| ||||||||||| |||||||||||||| ||||||||||    
T  8653 agtaggaggatgattcctcagaaaagtttccaacatcctaacttcggcattagcaccagcattagcattaggctgttgccccacaactt 8565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 4549 - 4656
Alignment:
Q  205 aggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagt 304  Q
    |||||||||||||||||| |||| ||||||||||   ||||||||  ||||||||||||||  |||||| ||||||||| ||| ||| ||  |||  |||    
T  4549 aggatgattcctcagaaaagtttctagcatcctcacttcagcattaccaccagcatttgcagcaggctgatgtcccacagcttgagcaacaacttcaagt 4648  T
Q  305 gcagcagc 312  Q
    ||||||||    
T  4649 gcagcagc 4656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 17278 - 17168
Alignment:
Q  201 taggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttg 300  Q
    ||||||||||||||| |||||| |||| ||||||||||   ||| |||| |||||||||||||||  | |||| ||||||||| ||| ||||||  |||     
T  17278 taggaggatgattcc-cagaaaagtttctagcatcctcacttcaacattagcaccagcatttgcagcatgctgatgtcccacagcttgagctacaacttc 17180  T
Q  301 tagtgcagcagc 312  Q
    ||||||||||||    
T  17179 tagtgcagcagc 17168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 9224 - 9335
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggct 298  Q
    ||||||||||||||||||||||||||| | ||||||||| |  |||||| |  |||||| |||||||  |||||| ||||| ||| ||| ||||||  ||    
T  9224 agtaggaggatgattcctcagaaaggtctctagcatccttgcttcagcacttacaccagtatttgcagcaggctgatgtccaacagctttagctacaact 9323  T
Q  299 tgtagtgcagca 310  Q
    | ||||||||||    
T  9324 tctagtgcagca 9335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 11727 - 11665
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 261  Q
    ||||| |||||||||||||| |||||| |  |||||||||| |||||||||||||||||||||    
T  11727 agtagcaggatgattcctcataaaggtctcaagcatcctcgactcagcattcgcaccagcatt 11665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 104820 - 104750
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||||| ||||||||| ||||||||||||| ||||||||| ||| |||||| |||| |||| |||||||    
T  104820 tcagcatttgcaccagcacttgcattaggctgatgtcccacagcttgagctacagcttctagtacagcagc 104750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 21177 - 21218
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  21177 tcagcattagcaccagcattcgcattaggctgttgtcccaca 21218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 22193 - 22302
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||| |||||||||| || ||||| |||||||||||| |||  || || |||||||    
T  22193 ggaggatgatttctcatgaaggtctccaacatcctggtctcagcattcacaccagcattagcgttaggttgttgtcccacagcttgggcaacagcttgta 22292  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  22293 gagcagcagc 22302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 15429 - 15538
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||||||||  |||||||||| || ||||| |||||||||||| |||  || || |||||||    
T  15429 ggaggatgatttctcatgaaggtctccaacatcctggtctcagcattaacaccagcattagcgttaggttgttgtcccacagcttgggcaacagcttgta 15528  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  15529 gagcagcagc 15538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 49696 - 49776
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||||||||||||||| ||||||||||| || ||||| |||||||||||| |||  || || |||||| | ||||||||    
T  49696 catcctcgtctcagcatttgcaccagcattcgctttaggttgttgtcccacagcttgggcaacagcttgtcgagcagcagc 49776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 425333 - 425413
Alignment:
Q  232 catcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||| ||||||||||||||||||||||| || ||||| |||||||||||| |||  || ||  ||||||| ||||||||    
T  425333 catcctagtctcagcattcgcaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgtagagcagcagc 425413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 138691 - 138800
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||| ||||  ||||| |  | |||||| |||||| || || ||||| ||||||||||||| |||||||||||| |||  || || |||||||    
T  138691 ggaggatgatttctcatgaaggtctccaacatcctagtctcaacaatcacaccaacatttgcattaggttgttgtcccacagcttgggcaacagcttgta 138790  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  138791 gagcagcagc 138800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 330 - 435
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    |||||||||||||||||| | |||||  ||||||||| |||| ||||||||| || |||||   ||| ||| |||||||||||||   ||| |||||||     
T  330 gagactccaagaagatcatcgagaattgttgagaaggtcaaggcagctcctccagcagagccaaaaactgacccccctaagaaacgtagcagaaagtcat 429  T
Q  123 cagctt 128  Q
    ||||||    
T  430 cagctt 435  T

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Target: scaffold0339; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 9426 - 9321
Alignment:
Q  23 gagactccaagaagatcagcaagaatcattgagaaggccaagacagctcctctagtagagcatcaaagtgagccccctaagaaacagggcaaaaagtcag 122  Q
    |||||||||||||||||| | |||||  ||||||||| |||| ||||||||| || |||||   ||||||| || ||||||||||   ||| |||||||     
T  9426 gagactccaagaagatcatcgagaattgttgagaaggtcaaggcagctcctccagcagagccaaaaagtgacccacctaagaaacgtagcagaaagtcat 9327  T
Q  123 cagctt 128  Q
    ||||||    
T  9326 cagctt 9321  T

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Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 312
Target Start/End: Original strand, 42193 - 42266
Alignment:
Q  239 gtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||| |||  || ||  ||||||| ||||||||    
T  42193 gtctcagcattcgcaccagcatttgcgttaggttgttatcccacagcttgggcaacaacttgtagagcagcagc 42266  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 229151 - 229042
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||||||||  ||||| |  | |||||| |||| ||||||| |||||||||| || ||||| |||||||||||| |||  || ||  ||||||    
T  229151 ggaggatgattcctcatgaaggtctccaacatcctggtcttagcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgta 229052  T
Q  303 gtgcagcagc 312  Q
    | ||||||||    
T  229051 gagcagcagc 229042  T

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Target: scaffold0556 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 5758 - 5830
Alignment:
Q  211 attcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    |||||||||||| || | |||||||||||  |||||| | |||||| |||| |||||||||||||| ||||||    
T  5758 attcctcagaaaagtctctagcatcctcgcttcagcacttgcaccatcattcgcattaggctgttgccccaca 5830  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 18165 - 18245
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    ||||||||||||||||  || || |  | |||||| |||||||||||| |||||||||| || ||||| ||||||||||||    
T  18165 ggaggatgattcctcatgaatgtctccaacatcctggtctcagcattcacaccagcattcgcgttaggttgttgtcccaca 18245  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 442653 - 442737
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    |||||| ||||||||||||||||| ||||  | ||||||    |||||||| |||||| |||| |||||||||||||| ||||||    
T  442653 agtaggtggatgattcctcagaaaagtttccaacatcctaacttcagcattagcaccaacattagcattaggctgttgccccaca 442737  T

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Target: scaffold0451 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 13329 - 13214
Alignment:
Q  203 ggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgta 302  Q
    ||||||||||||||||  || || |  | |||||| |||||| ||||| |||||||||| || ||||| |||||||||||| |||  || ||  ||||||    
T  13329 ggaggatgattcctcatgaacgtctccaacatcctggtctcatcattcacaccagcattcgcgttaggttgttgtcccacagcttgggcaacaacttgta 13230  T
Q  303 gtgcagcagccaatgc 318  Q
    | |||||||| |||||    
T  13229 gagcagcagctaatgc 13214  T

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Target: scaffold0395 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 15826 - 15767
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagc 258  Q
    |||||||||||||||||||||||| |||| |||||| |||   |||||||| ||||||||    
T  15826 agtaggaggatgattcctcagaaaagtttctagcattctcacttcagcattagcaccagc 15767  T

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Target: scaffold0289 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 789 - 851
Alignment:
Q  199 agtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 261  Q
    ||||||||||||||||||||  || || |  | ||||||||||||||||||| ||||||||||    
T  789 agtaggaggatgattcctcatgaaagtctcaaccatcctcgtctcagcattcacaccagcatt 851  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 30316 - 30250
Alignment:
Q  246 cattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||||||||||   ||||| || |||||||||||| ||| |||||||||||  |||||||||||    
T  30316 cattcgcaccagcaccagcattcggttgttgtcccacagcttgagctacggcttcaagtgcagcagc 30250  T

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Target: scaffold0819 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 1105 - 1166
Alignment:
Q  200 gtaggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatt 261  Q
    |||||||||||||||||||  || || |  ||||||||||||||||||||| | ||||||||    
T  1105 gtaggaggatgattcctcatgaatgtctcaagcatcctcgtctcagcattcaccccagcatt 1166  T

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Target: scaffold0282 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 12858 - 12817
Alignment:
Q  242 tcagcattcgcaccagcatttgcattaggctgttgtcccaca 283  Q
    |||||||| |||||||| || |||||||||||||||||||||    
T  12858 tcagcattagcaccagcgttagcattaggctgttgtcccaca 12817  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 312
Target Start/End: Complemental strand, 23481 - 23386
Alignment:
Q  216 tcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaacttaagctacggcttgtagtgcagcagc 312  Q
    ||||||| || | |||| ||||| | |||||||| |  ||| |||||||||| || |||||||||||| ||| ||| ||| ||||||||||||||||    
T  23481 tcagaaaagtctctagcttcctcatttcagcattagtcccaacatttgcatt-ggttgttgtcccacagcttgagccacgacttgtagtgcagcagc 23386  T

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Target: scaffold0046 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 933 - 1017
Alignment:
Q  202 aggaggatgattcctcagaaaggtttatagcatcctcgtctcagcattcgcaccagcatttgcattaggctgttgtcccacaact 286  Q
    ||||||||| ||||||||||| || | || ||| ||   |||||||||||||||| |||| |||||  |||||||||| ||||||    
T  933 aggaggatggttcctcagaaaagtctctaacattctgacctcagcattcgcaccaacattagcattttgctgttgtcctacaact 1017  T

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