View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1288_low_20 (Length: 446)
Name: NF1288_low_20
Description: NF1288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1288_low_20 |
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Alignment Details
Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 28452794 - 28452891
Alignment:
| Q |
268 |
ttggcaaaggagtaaattgaaaggagaagaaatttgtgagtttgtgaaagtacaaatgttgttgtcctccattgtgcaaatcccccctttgtttcttc |
365 |
Q |
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| T |
28452794 |
ttggcaaaggagtaaattgaaaggagaagaaatttgtgagtttgtgaaagtacaaatgttgttgtcctccattgtgcaaatcccccatttgtttcttc |
28452891 |
T |
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