View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1288_low_32 (Length: 340)

Name: NF1288_low_32
Description: NF1288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1288_low_32
NF1288_low_32
[»] chr7 (40 HSPs)
chr7 (146-332)||(19590884-19591071)
chr7 (146-332)||(38859000-38859187)
chr7 (147-332)||(35288903-35289089)
chr7 (146-332)||(32004613-32004800)
chr7 (146-332)||(37787126-37787313)
chr7 (145-332)||(19830779-19830966)
chr7 (146-332)||(34533790-34533977)
chr7 (146-332)||(2658838-2659025)
chr7 (150-332)||(4641803-4641983)
chr7 (160-332)||(29099863-29100036)
chr7 (146-329)||(23952729-23952914)
chr7 (145-307)||(37786765-37786927)
chr7 (150-307)||(19830423-19830580)
chr7 (147-307)||(19590525-19590685)
chr7 (145-307)||(38858641-38858803)
chr7 (147-307)||(32004999-32005159)
chr7 (146-307)||(2659225-2659386)
chr7 (146-259)||(35289334-35289447)
chr7 (145-307)||(4641438-4641600)
chr7 (145-307)||(29100236-29100398)
chr7 (146-307)||(34534176-34534337)
chr7 (153-307)||(23953114-23953268)
chr7 (150-307)||(4478085-4478242)
chr7 (146-266)||(38160950-38161070)
chr7 (146-260)||(28583438-28583552)
chr7 (148-259)||(28584355-28584466)
chr7 (263-332)||(4477818-4477887)
chr7 (150-307)||(35578902-35579058)
chr7 (149-307)||(9181534-9181692)
chr7 (263-326)||(9393852-9393914)
chr7 (66-109)||(32677082-32677125)
chr7 (144-307)||(34595158-34595321)
chr7 (265-307)||(26026437-26026478)
chr7 (270-307)||(26048071-26048108)
chr7 (147-200)||(26048439-26048492)
chr7 (147-200)||(27245203-27245256)
chr7 (270-307)||(28687885-28687922)
chr7 (270-307)||(48247977-48248014)
chr7 (263-307)||(32427406-32427449)
chr7 (66-122)||(34998654-34998710)
[»] scaffold0951 (2 HSPs)
scaffold0951 (146-330)||(2028-2213)
scaffold0951 (146-307)||(1666-1827)
[»] chr8 (33 HSPs)
chr8 (145-332)||(13224998-13225186)
chr8 (146-332)||(19176289-19176476)
chr8 (142-332)||(41681493-41681684)
chr8 (144-332)||(44831244-44831433)
chr8 (150-332)||(9928912-9929095)
chr8 (145-332)||(11656816-11657004)
chr8 (150-332)||(12572210-12572393)
chr8 (146-332)||(33742921-33743107)
chr8 (148-332)||(31133579-31133764)
chr8 (149-332)||(33328499-33328683)
chr8 (146-306)||(41681133-41681292)
chr8 (146-305)||(34540934-34541094)
chr8 (146-307)||(12571862-12572024)
chr8 (146-307)||(19176675-19176836)
chr8 (146-301)||(4629796-4629952)
chr8 (146-307)||(44831630-44831791)
chr8 (145-307)||(33328156-33328318)
chr8 (145-307)||(9930042-9930204)
chr8 (146-260)||(11656454-11656568)
chr8 (146-307)||(31133219-31133380)
chr8 (151-307)||(13224645-13224800)
chr8 (147-307)||(9178021-9178180)
chr8 (146-255)||(11336959-11337068)
chr8 (239-332)||(9177724-9177818)
chr8 (194-307)||(33743304-33743417)
chr8 (150-307)||(4630177-4630328)
chr8 (145-259)||(8073985-8074098)
chr8 (150-256)||(10918129-10918235)
chr8 (229-260)||(43958267-43958298)
chr8 (146-200)||(15255852-15255906)
chr8 (148-307)||(28254812-28254971)
chr8 (270-306)||(18049714-18049750)
chr8 (275-307)||(18805290-18805322)
[»] chr6 (42 HSPs)
chr6 (146-332)||(22219712-22219899)
chr6 (146-332)||(11445346-11445533)
chr6 (146-332)||(12935156-12935343)
chr6 (144-332)||(31470312-31470501)
chr6 (150-307)||(10899942-10900100)
chr6 (145-332)||(20741460-20741651)
chr6 (146-332)||(23075487-23075674)
chr6 (150-332)||(18504922-18505105)
chr6 (146-332)||(2319671-2319857)
chr6 (147-332)||(18257496-18257682)
chr6 (148-326)||(15827639-15827819)
chr6 (146-307)||(18257136-18257297)
chr6 (146-307)||(20741099-20741260)
chr6 (146-307)||(28472636-28472796)
chr6 (146-307)||(29859825-29859985)
chr6 (147-307)||(10900315-10900475)
chr6 (148-307)||(31470701-31470860)
chr6 (147-307)||(11276967-11277127)
chr6 (145-307)||(15828026-15828188)
chr6 (145-309)||(11276588-11276753)
chr6 (147-332)||(4811616-4811801)
chr6 (146-307)||(12935542-12935703)
chr6 (150-307)||(2322604-2322760)
chr6 (146-260)||(11444986-11445100)
chr6 (147-307)||(1149816-1149977)
chr6 (145-244)||(23073997-23074096)
chr6 (148-306)||(18505305-18505463)
chr6 (147-259)||(4811372-4811484)
chr6 (141-260)||(3835158-3835277)
chr6 (146-235)||(1149464-1149553)
chr6 (149-250)||(29033436-29033537)
chr6 (149-260)||(29035069-29035180)
chr6 (146-260)||(18296144-18296258)
chr6 (276-332)||(1149558-1149614)
chr6 (263-325)||(32836118-32836179)
chr6 (147-203)||(22534214-22534270)
chr6 (288-332)||(28472997-28473041)
chr6 (147-198)||(28636292-28636343)
chr6 (263-309)||(35163570-35163615)
chr6 (270-307)||(28636582-28636619)
chr6 (270-307)||(31073528-31073565)
chr6 (270-307)||(31573848-31573885)
[»] chr5 (58 HSPs)
chr5 (150-332)||(5818932-5819115)
chr5 (146-332)||(19359495-19359682)
chr5 (146-332)||(8647797-8647984)
chr5 (144-332)||(8461290-8461479)
chr5 (144-332)||(29454737-29454926)
chr5 (149-332)||(2864756-2864940)
chr5 (150-332)||(18182973-18183156)
chr5 (147-332)||(164191-164376)
chr5 (146-332)||(24331558-24331747)
chr5 (149-330)||(14215243-14215425)
chr5 (145-332)||(25000448-25000636)
chr5 (147-325)||(15709335-15709513)
chr5 (146-307)||(18183354-18183515)
chr5 (147-307)||(5819314-5819474)
chr5 (150-332)||(16018946-16019129)
chr5 (146-307)||(2865140-2865301)
chr5 (146-307)||(8460929-8461090)
chr5 (146-307)||(15708970-15709130)
chr5 (147-307)||(8647438-8647598)
chr5 (149-332)||(15371873-15372060)
chr5 (146-307)||(24362221-24362382)
chr5 (147-303)||(19359136-19359292)
chr5 (144-307)||(29455127-29455290)
chr5 (153-332)||(24361843-24362022)
chr5 (150-307)||(15372258-15372415)
chr5 (146-307)||(14215628-14215789)
chr5 (153-332)||(24325218-24325397)
chr5 (146-307)||(14463906-14464066)
chr5 (146-307)||(164576-164737)
chr5 (148-260)||(4222154-4222266)
chr5 (145-260)||(16018587-16018701)
chr5 (147-260)||(4623148-4623261)
chr5 (147-256)||(7349453-7349562)
chr5 (149-307)||(24331945-24332107)
chr5 (153-255)||(6019208-6019309)
chr5 (165-307)||(25000108-25000250)
chr5 (147-260)||(7348559-7348672)
chr5 (226-308)||(14462683-14462770)
chr5 (148-260)||(6018315-6018426)
chr5 (235-329)||(10721873-10721967)
chr5 (147-260)||(4219663-4219776)
chr5 (263-325)||(27307177-27307238)
chr5 (171-260)||(4624657-4624746)
chr5 (235-332)||(28494931-28495029)
chr5 (145-322)||(41834430-41834607)
chr5 (143-325)||(16752938-16753120)
chr5 (198-260)||(13814159-13814226)
chr5 (65-122)||(20524529-20524586)
chr5 (148-200)||(32697719-32697771)
chr5 (301-332)||(14463732-14463763)
chr5 (67-122)||(20654461-20654516)
chr5 (146-307)||(28290030-28290191)
chr5 (270-307)||(15029695-15029732)
chr5 (270-307)||(28289807-28289844)
chr5 (263-307)||(27307444-27307487)
chr5 (263-307)||(28495227-28495270)
chr5 (275-307)||(32305945-32305977)
chr5 (67-111)||(36442658-36442702)
[»] chr4 (72 HSPs)
chr4 (147-332)||(22434179-22434365)
chr4 (146-332)||(20470870-20471057)
chr4 (147-332)||(45082783-45082969)
chr4 (146-332)||(15523234-15523421)
chr4 (147-332)||(46193405-46193591)
chr4 (146-332)||(23494802-23494989)
chr4 (147-332)||(25447247-25447433)
chr4 (147-332)||(12234688-12234874)
chr4 (145-332)||(11153144-11153332)
chr4 (145-332)||(25938030-25938218)
chr4 (150-332)||(4219918-4220101)
chr4 (150-332)||(54995072-54995255)
chr4 (145-332)||(18751597-18751785)
chr4 (145-327)||(48526545-48526728)
chr4 (146-332)||(51021155-51021341)
chr4 (149-332)||(2118295-2118480)
chr4 (171-332)||(12503460-12503622)
chr4 (146-307)||(25447621-25447782)
chr4 (141-306)||(12234323-12234488)
chr4 (150-307)||(22434563-22434718)
chr4 (143-307)||(15523619-15523783)
chr4 (144-307)||(33109681-33109844)
chr4 (147-307)||(11153532-11153692)
chr4 (146-307)||(25937669-25937830)
chr4 (149-307)||(46193790-46193948)
chr4 (146-307)||(48526195-48526355)
chr4 (145-307)||(2118681-2118842)
chr4 (145-307)||(22170322-22170483)
chr4 (149-307)||(23494445-23494603)
chr4 (149-307)||(38962204-38962362)
chr4 (149-306)||(4219559-4219716)
chr4 (149-260)||(18763952-18764063)
chr4 (146-272)||(33109883-33110010)
chr4 (150-307)||(45082435-45082590)
chr4 (146-307)||(51020796-51020957)
chr4 (147-258)||(35363034-35363146)
chr4 (150-260)||(54995500-54995609)
chr4 (148-255)||(20958296-20958403)
chr4 (146-253)||(48708294-48708401)
chr4 (147-256)||(48294979-48295088)
chr4 (143-255)||(10258324-10258436)
chr4 (148-260)||(44892580-44892692)
chr4 (145-260)||(16690934-16691049)
chr4 (171-260)||(43243712-43243801)
chr4 (146-256)||(48293593-48293703)
chr4 (150-260)||(48713778-48713888)
chr4 (145-217)||(16318251-16318323)
chr4 (148-256)||(44890518-44890626)
chr4 (171-260)||(43281223-43281311)
chr4 (147-259)||(16691505-16691616)
chr4 (205-260)||(43242328-43242383)
chr4 (154-259)||(20957196-20957301)
chr4 (215-307)||(12503821-12503913)
chr4 (144-307)||(17503971-17504133)
chr4 (147-255)||(55189528-55189636)
chr4 (144-200)||(55677451-55677507)
chr4 (288-326)||(10795692-10795730)
chr4 (263-307)||(17504345-17504389)
chr4 (263-307)||(35193424-35193467)
chr4 (66-122)||(39503431-39503487)
chr4 (265-307)||(12593143-12593184)
chr4 (150-319)||(40160465-40160633)
chr4 (208-258)||(44220811-44220861)
chr4 (265-307)||(46736774-46736815)
chr4 (146-200)||(46737148-46737202)
chr4 (270-307)||(14439951-14439988)
chr4 (270-307)||(26974407-26974444)
chr4 (270-307)||(45838933-45838970)
chr4 (146-198)||(12593518-12593570)
chr4 (144-200)||(21034730-21034786)
chr4 (275-307)||(46737041-46737073)
chr4 (140-200)||(54440564-54440624)
[»] chr3 (74 HSPs)
chr3 (147-332)||(37727289-37727475)
chr3 (146-332)||(43973799-43973986)
chr3 (145-325)||(39555576-39555757)
chr3 (145-332)||(31778651-31778839)
chr3 (146-332)||(4275723-4275910)
chr3 (146-332)||(29801775-29801962)
chr3 (144-332)||(27393658-27393847)
chr3 (141-332)||(5137340-5137532)
chr3 (145-332)||(20840920-20841108)
chr3 (146-332)||(17464490-17464677)
chr3 (147-332)||(25853234-25853420)
chr3 (146-332)||(22424813-22425000)
chr3 (147-332)||(23644823-23645010)
chr3 (150-324)||(26837363-26837538)
chr3 (142-330)||(30098121-30098313)
chr3 (145-332)||(32534957-32535145)
chr3 (145-332)||(24300555-24300742)
chr3 (145-332)||(26274565-26274753)
chr3 (172-330)||(41047060-41047218)
chr3 (146-307)||(31779037-31779198)
chr3 (139-302)||(48452981-48453144)
chr3 (147-307)||(39555962-39556122)
chr3 (146-307)||(20840559-20840720)
chr3 (150-307)||(5136983-5137140)
chr3 (147-307)||(32535344-32535508)
chr3 (150-307)||(41046703-41046860)
chr3 (145-307)||(37726927-37727089)
chr3 (146-307)||(24300941-24301102)
chr3 (143-307)||(27393962-27394126)
chr3 (147-259)||(29801356-29801468)
chr3 (145-307)||(23644460-23644622)
chr3 (146-307)||(30104481-30104641)
chr3 (146-307)||(26837741-26837901)
chr3 (147-307)||(43973441-43973601)
chr3 (150-260)||(25612409-25612519)
chr3 (149-307)||(25853612-25853770)
chr3 (139-307)||(17464876-17465045)
chr3 (151-260)||(22425245-22425354)
chr3 (150-307)||(26274952-26275108)
chr3 (147-260)||(50116841-50116954)
chr3 (147-260)||(23228440-23228552)
chr3 (148-260)||(51473429-51473541)
chr3 (146-260)||(51474766-51474880)
chr3 (148-260)||(32697132-32697244)
chr3 (172-260)||(18010177-18010265)
chr3 (146-258)||(45965937-45966049)
chr3 (149-259)||(25420574-25420684)
chr3 (146-223)||(37222040-37222117)
chr3 (146-260)||(37220556-37220670)
chr3 (148-244)||(25419145-25419242)
chr3 (263-326)||(8873807-8873869)
chr3 (146-307)||(27200078-27200238)
chr3 (144-260)||(23227259-23227369)
chr3 (145-307)||(51827955-51828117)
chr3 (263-307)||(55192234-55192277)
chr3 (266-325)||(50900652-50900710)
chr3 (270-307)||(32730775-32730812)
chr3 (235-322)||(2323466-2323553)
chr3 (266-332)||(37076034-37076101)
chr3 (150-260)||(32695706-32695816)
chr3 (67-109)||(45805455-45805497)
chr3 (265-307)||(50662798-50662839)
chr3 (265-307)||(52236935-52236976)
chr3 (270-307)||(40275218-40275255)
chr3 (270-307)||(40838775-40838812)
chr3 (270-307)||(40839038-40839075)
chr3 (270-307)||(47431820-47431857)
chr3 (270-307)||(51828343-51828380)
chr3 (270-307)||(52375450-52375487)
chr3 (270-307)||(52375717-52375754)
chr3 (270-307)||(55389728-55389765)
chr3 (263-307)||(36701225-36701268)
chr3 (275-307)||(37075816-37075848)
chr3 (263-307)||(49407912-49407955)
[»] chr2 (56 HSPs)
chr2 (145-332)||(18450828-18451016)
chr2 (149-332)||(40815347-40815531)
chr2 (146-332)||(22374684-22374871)
chr2 (146-332)||(11090879-11091066)
chr2 (146-332)||(43058692-43058878)
chr2 (145-330)||(40027501-40027687)
chr2 (145-332)||(28616973-28617161)
chr2 (146-332)||(7446705-7446892)
chr2 (146-332)||(1978468-1978655)
chr2 (139-332)||(239711-239905)
chr2 (150-325)||(8425358-8425533)
chr2 (146-307)||(26538463-26538625)
chr2 (147-332)||(3025822-3026006)
chr2 (146-307)||(239352-239512)
chr2 (149-332)||(14432500-14432684)
chr2 (144-307)||(40027137-40027300)
chr2 (150-307)||(11090524-11090681)
chr2 (146-307)||(1978107-1978268)
chr2 (146-307)||(22374319-22374480)
chr2 (150-307)||(40815730-40815887)
chr2 (144-307)||(26538094-26538257)
chr2 (145-303)||(7446340-7446497)
chr2 (146-260)||(20440463-20440577)
chr2 (150-307)||(8425745-8425902)
chr2 (146-307)||(18451216-18451377)
chr2 (147-260)||(28616613-28616726)
chr2 (145-260)||(20444747-20444862)
chr2 (153-307)||(3025472-3025625)
chr2 (147-307)||(43058333-43058493)
chr2 (146-260)||(28847127-28847241)
chr2 (150-307)||(14432145-14432302)
chr2 (148-260)||(35781095-35781207)
chr2 (149-260)||(15552486-15552596)
chr2 (149-258)||(8972239-8972348)
chr2 (147-260)||(35779708-35779821)
chr2 (149-263)||(15551501-15551615)
chr2 (146-307)||(28143416-28143576)
chr2 (64-109)||(30706075-30706120)
chr2 (145-305)||(31797166-31797325)
chr2 (147-198)||(4355755-4355806)
chr2 (146-307)||(62956-63117)
chr2 (265-307)||(15550793-15550834)
chr2 (146-200)||(25336093-25336147)
chr2 (265-307)||(33920731-33920772)
chr2 (146-200)||(38007949-38008003)
chr2 (146-200)||(43216202-43216256)
chr2 (146-307)||(44219643-44219804)
chr2 (270-307)||(4356142-4356179)
chr2 (270-307)||(4809002-4809039)
chr2 (270-307)||(5560936-5560973)
chr2 (147-200)||(6949937-6949990)
chr2 (270-307)||(11540024-11540061)
chr2 (270-307)||(13399545-13399582)
chr2 (270-307)||(42192628-42192665)
chr2 (144-200)||(32418156-32418212)
chr2 (270-306)||(43160397-43160433)
[»] chr1 (52 HSPs)
chr1 (144-332)||(18984478-18984667)
chr1 (149-332)||(21856044-21856228)
chr1 (146-332)||(50970277-50970464)
chr1 (149-332)||(17433574-17433758)
chr1 (145-332)||(39154379-39154567)
chr1 (145-332)||(33143913-33144103)
chr1 (147-332)||(29869978-29870164)
chr1 (148-332)||(4636330-4636515)
chr1 (148-332)||(5539817-5540002)
chr1 (148-332)||(8678542-8678727)
chr1 (146-332)||(15173453-15173639)
chr1 (146-333)||(15646191-15646379)
chr1 (147-319)||(26859059-26859232)
chr1 (147-307)||(29307326-29307487)
chr1 (146-307)||(9019347-9019509)
chr1 (148-330)||(5962579-5962762)
chr1 (144-307)||(15646580-15646743)
chr1 (145-307)||(50970663-50970825)
chr1 (145-307)||(5540203-5540365)
chr1 (146-307)||(18984118-18984279)
chr1 (142-307)||(29869615-29869780)
chr1 (147-307)||(8678927-8679086)
chr1 (147-307)||(29306953-29307113)
chr1 (149-307)||(33144304-33144462)
chr1 (147-307)||(21856428-21856588)
chr1 (144-307)||(5962963-5963126)
chr1 (146-260)||(9018972-9019086)
chr1 (147-332)||(17112282-17112467)
chr1 (150-307)||(15173099-15173256)
chr1 (149-307)||(39154021-39154179)
chr1 (147-307)||(17433216-17433376)
chr1 (144-260)||(52268287-52268403)
chr1 (146-260)||(26859491-26859605)
chr1 (146-233)||(2733416-2733503)
chr1 (149-260)||(52269180-52269291)
chr1 (172-247)||(47827033-47827108)
chr1 (149-222)||(47826966-47827039)
chr1 (146-307)||(44802557-44802718)
chr1 (207-307)||(4636033-4636132)
chr1 (147-227)||(50419726-50419806)
chr1 (263-307)||(17088526-17088569)
chr1 (66-109)||(7101275-7101318)
chr1 (145-200)||(29438928-29438983)
chr1 (270-307)||(8229763-8229800)
chr1 (270-307)||(8230027-8230064)
chr1 (270-307)||(17641750-17641787)
chr1 (147-200)||(23340183-23340236)
chr1 (270-307)||(34555766-34555803)
chr1 (270-307)||(44954349-44954386)
chr1 (270-307)||(44954612-44954649)
chr1 (66-122)||(16253155-16253211)
chr1 (235-326)||(45048504-45048594)
[»] scaffold0417 (2 HSPs)
scaffold0417 (147-325)||(10989-11168)
scaffold0417 (171-307)||(10645-10781)
[»] scaffold0007 (3 HSPs)
scaffold0007 (145-332)||(64664-64852)
scaffold0007 (144-307)||(64299-64462)
scaffold0007 (144-307)||(205754-205916)
[»] scaffold0295 (2 HSPs)
scaffold0295 (149-326)||(5160-5334)
scaffold0295 (141-307)||(4787-4953)
[»] scaffold1223 (2 HSPs)
scaffold1223 (147-307)||(1125-1286)
scaffold1223 (149-307)||(755-912)
[»] scaffold0273 (2 HSPs)
scaffold0273 (186-332)||(4242-4389)
scaffold0273 (146-307)||(4592-4753)
[»] scaffold0157 (2 HSPs)
scaffold0157 (171-332)||(16855-17017)
scaffold0157 (215-307)||(16564-16656)
[»] scaffold0027 (2 HSPs)
scaffold0027 (143-307)||(42165-42330)
scaffold0027 (146-307)||(42544-42704)
[»] scaffold0113 (1 HSPs)
scaffold0113 (145-260)||(28675-28790)
[»] scaffold0176 (2 HSPs)
scaffold0176 (145-307)||(18833-18994)
scaffold0176 (147-244)||(19069-19166)
[»] scaffold0019 (1 HSPs)
scaffold0019 (146-307)||(134058-134219)
[»] scaffold0432 (2 HSPs)
scaffold0432 (150-306)||(10259-10414)
scaffold0432 (150-332)||(9935-10116)
[»] scaffold1585 (1 HSPs)
scaffold1585 (148-259)||(568-679)
[»] scaffold0076 (1 HSPs)
scaffold0076 (150-250)||(8451-8551)
[»] scaffold0057 (2 HSPs)
scaffold0057 (150-260)||(61890-62000)
scaffold0057 (146-221)||(61027-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (151-260)||(454-562)
[»] scaffold0168 (1 HSPs)
scaffold0168 (196-260)||(7720-7784)
[»] scaffold0712 (1 HSPs)
scaffold0712 (265-307)||(6777-6818)
[»] scaffold0709 (1 HSPs)
scaffold0709 (265-307)||(6795-6836)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 3e-85; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 19591071 - 19590884
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19591071 aggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19590972  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590971 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 19590884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 38859187 - 38859000
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  38859187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 38859088  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  38859087 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 38859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 147 - 332
Target Start/End: Original strand, 35288903 - 35289089
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  247 tgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| || || |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacccctatgct 35289089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 32004613 - 32004800
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  32004613 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 32004712  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32004713 ttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacccctatgct 32004800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 37787313 - 37787126
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||    
T  37787313 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttg 37787214  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  37787213 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacccctatgct 37787126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 19830966 - 19830779
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||||||||||| |||||||||||  ||||||||||||||||    
T  19830966 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcattttt 19830867  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| |||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19830866 gttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacccctatgct 19830779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 34533790 - 34533977
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||    
T  34533790 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttg 34533889  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||| ||||| | ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  34533890 ttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacccctatgct 34533977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 2658838 - 2659025
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  2658838 aggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 2658937  T
Q  246 ttgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||  | ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  2658938 ttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctacacctatgct 2659025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 4641983 - 4641803
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||||||||||||   |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  250 atttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    || |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacatacctctatgct 4641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 160 - 332
Target Start/End: Original strand, 29099863 - 29100036
Alignment:
Q  160 ttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtc 259  Q
    |||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  260 c-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    | | ||||||||||||||| ||||||||| ||| ||||||||||||||||  |||||||||||||| |||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacctctatgct 29100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 146 - 329
Target Start/End: Original strand, 23952729 - 23952914
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcc-tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||||||||||||||||||||| | |||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||     
T  23952729 aggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttg 23952828  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctat 329  Q
    |||||||||||||||| | || |||||||||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  23952829 gttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttaggcagttttaaacctacccctat 23952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 37786765 - 37786927
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  37786765 aaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 37786864  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  37786865 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 37786927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 19830423 - 19830580
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19830522  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  19830523 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 19830580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 19590525 - 19590685
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||| ||| || ||   ||| |  ||||| |||| ||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttag 19590685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 38858641 - 38858803
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||||||||| |||||||||||| | |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38858641 aaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcattttt 38858740  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| |||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  38858741 gttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 38858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 32005159 - 32004999
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| |  ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| || |||||||||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| |||||   ||| |  ||||| |||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttag 32004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 2659386 - 2659225
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||| |||||||| | | ||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2659386 aggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2659287  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  2659286 ttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 2659225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 35289447 - 35289334
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  35289447 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttgg 35289348  T
Q  246 ttgcatttttcgtc 259  Q
    ||||||||||||||    
T  35289347 ttgcatttttcgtc 35289334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 4641438 - 4641600
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| |||||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  4641438 aaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcattttt 4641537  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || ||   ||| |  ||||| ||| |||||||||||| ||||||||    
T  4641538 gttgcatttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttag 4641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 29100398 - 29100236
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| |||||||||||||||||| | ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29100398 aaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 29100299  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| |||| || ||   ||| |  ||||| |||||||||||||| ||||||||||    
T  29100298 gttgcattttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttag 29100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 34534337 - 34534176
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||| |||||||||  | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  34534337 aggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttg 34534238  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| |||  ||||||||||||||||||||    
T  34534237 ttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttag 34534176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 153 - 307
Target Start/End: Complemental strand, 23953268 - 23953114
Alignment:
Q  153 attacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 252  Q
    |||||| |||||||| | ||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  253 tttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||  || ||   ||| |  ||||| |||||||||||||| ||||||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttag 23953114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 4478242 - 4478085
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||| |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||| || |  ||| |||||||||||||||||||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgc 4478143  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||  |  |||  ||| |  ||||| |||||||||||||| ||||||||||    
T  4478142 atttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttag 4478085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 146 - 266
Target Start/End: Original strand, 38160950 - 38161070
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | | |||||||||||||||||||| |  ||||||||||||||||||||||||||  ||| ||||||||| |||||||    
T  38160950 aggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttg 38161049  T
Q  246 ttgcatttttcgtccaactcc 266  Q
    ||||||||||||||| |||||    
T  38161050 ttgcatttttcgtcctactcc 38161070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 28583438 - 28583552
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||| || | |||| |||||||||||||||| || ||||| ||| ||||||||||||||||     
T  28583438 aggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttta 28583537  T
Q  246 ttgcatttttcgtcc 260  Q
    |||||||||||||||    
T  28583538 ttgcatttttcgtcc 28583552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 28584466 - 28584355
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    |||||||||||||||| ||| | ||| ||||||||| |||||||| ||||| || ||||||||||||||||||||  ||| |||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  248 gcatttttcgtc 259  Q
    | ||||||||||    
T  28584366 gtatttttcgtc 28584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 4477818 - 4477887
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||    
T  4477818 ctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacccctatgct 4477887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 35578902 - 35579058
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||||||||||||||||  ||||| ||  ||||| ||| ||||||||||  ||| |||  ||||||||| |||||  || |||||| ||| ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtcata-aactatcatgttttttgc 35579000  T
Q  250 atttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    | ||||  ||| || |||||||||||| |||||||||||||||||||||||| ||||||    
T  35579001 agttttaatcctacatcctattttcaa-ctccagaaacgcagagaaatgacatttttag 35579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 9181534 - 9181692
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| |    ||||| || |||||||||| |||||||  | |||| |||  ||||||||  ||| || || ||| |||||| |||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttg 9181632  T
Q  249 catttttcgtccaa-ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    || |||| |||| | ||||   |||| ||||||||||||||| |||||||||||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 9181692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 9393852 - 9393914
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccc 326  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||| ||  || ||||||||||||    
T  9393852 ctcctattttcaa-ctccagaaacacagtgaaatgacagttttaagcaattatagacctacccc 9393914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 32677125 - 32677082
Alignment:
Q  66 agagaaattctaatatggttacattatcaaataaaaagtgtttg 109  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||    
T  32677125 agagaaattctaatatggtcacatgatcaaataaaaaatgtttg 32677082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 34595321 - 34595158
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtcattcaattatcattt 242  Q
    |||||||||||||||||||||||| |    ||||| || |||||||||| |||||||||  |||||||| | ||||||||  |||  | || |||||| |    
T  34595321 taaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatc-gaacaaaatcgtccctaaactatcatgt 34595223  T
Q  243 ttgttgcatttttcgtccaactcc--tattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    || ||||| |||| || | || ||  ||||||||| ||||||||||||| |||||||||||||||||    
T  34595222 tt-ttgcagttttagtgctacccccttattttcaa-ctccagaaacgcacagaaatgacagttttag 34595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 26026437 - 26026478
Alignment:
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  26026437 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 26026478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 26048071 - 26048108
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  26048071 tttccaactccagaaacgcacagaaatgacagttttag 26048108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 26048492 - 26048439
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||||||||||||||||| || ||| |||||| || |||||||||| |||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcct 26048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 27245203 - 27245256
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    ||||||||||||||||||||| |||  ||||| || |||||||||| |||||||    
T  27245203 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 27245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 28687922 - 28687885
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  28687922 tttccaactccagaaacgcacagaaatgacagttttag 28687885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 48248014 - 48247977
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  48248014 tttccaactccagaaacgcacagaaatgacagttttag 48247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 32427449 - 32427406
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||    
T  32427449 ctcctattttcaa-ctctaaaaacgcagagaaatgacagttttag 32427406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 34998710 - 34998654
Alignment:
Q  66 agagaaattctaatatggttacattatcaaataaaaagtgtttgaccatacacacat 122  Q
    ||||||||||||||||||| |||| |||||| ||||||| ||||  || ||||||||    
T  34998710 agagaaattctaatatggtcacatgatcaaagaaaaagtatttggtcacacacacat 34998654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 158; Significance: 5e-84; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 146 - 330
Target Start/End: Complemental strand, 2213 - 2028
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2213 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2114  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 330  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2113 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatg 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 1666 - 1827
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||    
T  1666 aggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttg 1765  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  1766 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 2e-83; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 13225186 - 13224998
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  13225186 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 13225087  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13225086 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 13224998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 19176289 - 19176476
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19176289 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176388  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  19176389 ttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccatatgct 19176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 142 - 332
Target Start/End: Complemental strand, 41681684 - 41681493
Alignment:
Q  142 aataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 241  Q
    |||| ||||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  41681684 aatatggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatt 41681585  T
Q  242 tttgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  41681584 tttgttgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacccctatgct 41681493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 144 - 332
Target Start/End: Original strand, 44831244 - 44831433
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  44831244 taaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttt 44831343  T
Q  244 tgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  44831344 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 44831433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 9928912 - 9929095
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctacccttatgct 9929095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 11657004 - 11656816
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||    
T  11657004 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcattttt 11656905  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||  |||||||||||| || ||||||||||||||||||    
T  11656904 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattgtagacctacccctatgct 11656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 12572393 - 12572210
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttaggcggttttagatctacccctatgct 12572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 33742921 - 33743107
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  33742921 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttg 33743019  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
     |||||||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33743020 atgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 33743107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 148 - 332
Target Start/End: Complemental strand, 31133764 - 31133579
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  248 gcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| | |||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggttttatgcggttttagacctatctctatgct 31133579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 149 - 332
Target Start/End: Complemental strand, 33328683 - 33328499
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||| |||||||||| | ||||||| |||||||||||||||| ||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  249 catttttcgt-ccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaaacctacccctatgct 33328499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 41681133 - 41681292
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41681133 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 41681232  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagtttta 306  Q
    ||||||||||||||| || || ||||| |  ||||| ||||||||||||||||||||||||    
T  41681233 ttgcatttttcgtcctacccccatttt-attctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 34541094 - 34540934
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||    
T  34541094 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 34540995  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagtttt 305  Q
    ||||||||||||||| | ||||||||||||||||  |||||||||||||||||| ||||||    
T  34540994 ttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 12571862 - 12572024
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  12571862 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttg 12571961  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| ||| ||   ||| |  ||||| |||||||||||||||||||||||||    
T  12571962 ttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttag 12572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 19176836 - 19176675
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19176836 aggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176737  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| ||||||||| |||||||||||||||    
T  19176736 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttag 19176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 146 - 301
Target Start/End: Original strand, 4629796 - 4629952
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||| |||||||  |  | |||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  4629796 aggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttta 4629895  T
Q  246 ttgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacag 301  Q
    ||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||    
T  4629896 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 44831791 - 44831630
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||| |||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  44831791 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttg 44831692  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||| |||| || ||   ||| |  ||||| |||| ||||||||||||||||||||    
T  44831691 ttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttag 44831630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 33328156 - 33328318
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 33328255  T
Q  245 gttgcatttttcgtccaactc-ctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || | | ||||| |  ||||| ||||||| |||||||||||||||||    
T  33328256 gttgcatttttcgtcctaccctcgatttt-attctccaaaaacgcaaagaaatgacagttttag 33328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 9930204 - 9930042
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||    
T  9930204 aaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcattttt 9930105  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || ||   ||| |  ||||| || ||||||||||||| ||||||||    
T  9930104 gttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttag 9930042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 11656454 - 11656568
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||    
T  11656454 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttg 11656553  T
Q  246 ttgcatttttcgtcc 260  Q
    |||||||||||||||    
T  11656554 ttgcatttttcgtcc 11656568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 31133219 - 31133380
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||| ||||| |||||||||||    
T  31133219 aggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttg 31133318  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| ||||| |||||||||||||||||||    
T  31133319 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 31133380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 13224645 - 13224800
Alignment:
Q  151 taattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 250  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||  || |||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  251 tttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 13224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 9178180 - 9178021
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||| ||  || || ||||| |  ||| | |||||||||||||||||| ||||||    
T  9178080 tgcatttttcatcttacccccatttt-attctcaaaaaacgcagagaaatgacaattttag 9178021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 255
Target Start/End: Complemental strand, 11337068 - 11336959
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  11337068 aggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttg 11336969  T
Q  246 ttgcattttt 255  Q
    ||||||||||    
T  11336968 ttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 239 - 332
Target Start/End: Original strand, 9177724 - 9177818
Alignment:
Q  239 atttttgttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||||| ||| || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacccctatgct 9177818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 33743417 - 33743304
Alignment:
Q  194 tggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagaga 293  Q
    |||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| || ||   ||| |  ||||| |||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  294 aatgacagttttag 307  Q
    ||| ||||||||||    
T  33743317 aataacagttttag 33743304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 4630328 - 4630177
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||||||||| |||| ||||||||| |||||||||||| |||||||||  ||||||||||||| | ||||||| ||||||||      |||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||| ||| || ||   ||| |  ||||| ||||||||| |||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttag 4630177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 8074098 - 8073985
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||||||| ||| |||||||||| | ||||||||||||| |||||||| || || || ||||||||||||||||||||   || ||||||||||| ||||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-tttt 8074000  T
Q  245 gttgcatttttcgtc 259  Q
    |||||||||| ||||    
T  8073999 gttgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 10918129 - 10918235
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||| |||| ||| | ||||||||  |||||||||||| ||||| ||||   |||||||||| |||||  ||| ||||| |||||||||||||||    
T  10918129 ttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgc 10918228  T
Q  250 atttttc 256  Q
    |||||||    
T  10918229 atttttc 10918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 260
Target Start/End: Original strand, 43958267 - 43958298
Alignment:
Q  229 ttcaattatcatttttgttgcatttttcgtcc 260  Q
    ||||||||||||||||||||||||||||||||    
T  43958267 ttcaattatcatttttgttgcatttttcgtcc 43958298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 15255852 - 15255906
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||||||||||||||||||||| |||  ||||| || |||||||||| |||||||    
T  15255852 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 15255906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 307
Target Start/End: Complemental strand, 28254971 - 28254812
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||||||||||| |||  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||  | || ||| ||  || |    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccctaaactat-ataatttt 28254874  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| |||| |||| | ||||   |||| ||||||||||||||| |||||||||||||||||    
T  28254873 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28254812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 18049714 - 18049750
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagtttta 306  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  18049714 tttccaactccagaaacgcacagaaatgacagtttta 18049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 18805290 - 18805322
Alignment:
Q  275 aactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| ||||||||||||||||||||    
T  18805290 aactccagaaacacagagaaatgacagttttag 18805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 8e-83; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 22219899 - 22219712
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22219899 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22219800  T
Q  246 ttgcatttttcg-tccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||| || | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22219799 ttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacccctatgct 22219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 11445533 - 11445346
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  11445533 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 11445434  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11445433 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacccacccctatgct 11445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 12935156 - 12935343
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12935156 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 12935255  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  12935256 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagatatacccctatgct 12935343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 144 - 332
Target Start/End: Original strand, 31470312 - 31470501
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    ||||||||||||||||||||| || | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| |||||    
T  31470312 taaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttt 31470411  T
Q  244 tgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  31470412 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacccctatgct 31470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 10899942 - 10900100
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 10900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 20741651 - 20741460
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat---t 241  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||   |    
T  20741651 aaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 20741552  T
Q  242 tttgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20741551 ttttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 20741460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 23075674 - 23075487
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  23075674 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23075575  T
Q  246 ttgcatttttcg-tccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||| || | |||||||||| |||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  23075574 ttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctacccttatgct 23075487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 18504922 - 18505105
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| | ||||||||||||||||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttaggcgattttagacctacccctatgct 18505105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 2319671 - 2319857
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  2319671 aggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 2319770  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| || ||   ||| |  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2319771 ttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 2319857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 147 - 332
Target Start/End: Complemental strand, 18257682 - 18257496
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||| |||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    | |||||||||||| | ||| ||||||| ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttaggcggttttagacctacccctatgct 18257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 148 - 326
Target Start/End: Original strand, 15827639 - 15827819
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa--acggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||| ||| |||||||||||| ||||||  |||||| ||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccc 326  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca-ttttaggcggttttagacttacccc 15827819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 18257136 - 18257297
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18257136 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18257235  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||  || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  18257236 ttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttag 18257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 20741099 - 20741260
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  20741099 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttg 20741198  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  20741199 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 20741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 28472636 - 28472796
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  28472636 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 28472735  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || || ||||| |  ||||| |||||||||||||||||||||||||    
T  28472736 ttgcatttttcgtcctacccccatttt-attctccaaaaacgcagagaaatgacagttttag 28472796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 29859825 - 29859985
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  29859825 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 29859924  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || || ||||| |  ||||| |||||||||||||||||||||||||    
T  29859925 ttgcatttttcgtcctacccccatttt-attctccaaaaacgcagagaaatgacagttttag 29859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 10900475 - 10900315
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | || ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 10900315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 148 - 307
Target Start/End: Complemental strand, 31470860 - 31470701
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  248 gcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| || ||   ||| |  ||||| |||||||||||||||||| ||||||    
T  31470760 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttag 31470701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 11277127 - 11276967
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || ||   ||| |  ||||| ||||| |||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttag 11276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 15828188 - 15828026
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcattttt 15828089  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || ||   ||| |  ||||| |||||||||||||| ||||||||||    
T  15828088 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttag 15828026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 145 - 309
Target Start/End: Original strand, 11276588 - 11276753
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||| ||| |||   ||||||||| ||||||| ||||||| |||| ||||||||||||||||||||| |||| ||||||| ||||||||    
T  11276588 aaggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcattttt 11276687  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggc 309  Q
    ||| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  11276688 gtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggc 11276753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 147 - 332
Target Start/End: Complemental strand, 4811801 - 4811616
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||| ||||||| || | ||||||||||||||||| ||||||| || |||  ||||||||||||||||||||||| ||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  247 tgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||| ||  | ||||||||||||||| ||| ||||||||| ||||| || |||||||  ||||||||||||||||||||||    
T  4811701 tgcatttttcatcatacctcctattttcaaaccccataaacgcaga-aaatggcaattttaggtagttttagacctacccctatgct 4811616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 12935703 - 12935542
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||    
T  12935703 aggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttg 12935604  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    || |||||||||||| || ||   ||| |  ||||| |||| ||||||||||||||||||||    
T  12935603 ttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttag 12935542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 2322760 - 2322604
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| || |||  ||| |  ||||| |||| ||||||||||||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcca-aaacacagagaaatgacagttttag 2322604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 11444986 - 11445100
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||||||||| |||| |||| |||||||||||||||||    
T  11444986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttg 11445085  T
Q  246 ttgcatttttcgtcc 260  Q
    |||||||||||||||    
T  11445086 ttgcatttttcgtcc 11445100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 1149977 - 1149816
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  247 tgcatttttcgtccaactcctattttcaaactcc-agaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || ||   ||| |  |||| | |||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttag 1149816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 145 - 244
Target Start/End: Original strand, 23073997 - 23074096
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 148 - 306
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    ||||||||| |||||||||| | ||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  248 gcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagtttta 306  Q
    ||||||||||||| || ||   ||| |  |||||  |||| ||||||||||||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 4811372 - 4811484
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||||||||||||   || |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  247 tgcatttttcgtc 259  Q
    | |||||||||||    
T  4811472 ttcatttttcgtc 4811484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 3835277 - 3835158
Alignment:
Q  141 taataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 240  Q
    |||||||| ||||||||||||||||||  ||||||||| ||||||||||||| ||||||||||  |||||||||||||||||  ||| || |||||||||    
T  3835277 taataaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcat 3835178  T
Q  241 ttttgttgcatttttcgtcc 260  Q
    |||||| |||||||||||||    
T  3835177 ttttgtggcatttttcgtcc 3835158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 1149464 - 1149553
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatt 235  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  1149464 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 29033436 - 29033537
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | || ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  249 ca 250  Q
    ||    
T  29033536 ca 29033537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 29035180 - 29035069
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||| ||| | ||||||| |||||||||||||| ||||  |||||||||||||||||||||||  ||| || | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  249 catttttcgtcc 260  Q
    ||||||||||||    
T  29035080 catttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 18296144 - 18296258
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||| | |||| ||| | |||||||| | ||||||| ||| || |  |||||||||||||||||||||||| ||| |||| ||||||||||||    
T  18296144 aggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttg 18296243  T
Q  246 ttgcatttttcgtcc 260  Q
    |||||||||||||||    
T  18296244 ttgcatttttcgtcc 18296258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 1149558 - 1149614
Alignment:
Q  276 actccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| |||||||||  |||||||||||| |||||||||||||||||||||    
T  1149558 actccagaaacacagagaaatagcagttttaggcgattttagacctacccctatgct 1149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 32836118 - 32836179
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 325  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||| |  ||||||||||||||    
T  32836118 ctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctaccc 32836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcc 203  Q
    ||||||||||||||||||||| | || ||||| || |||||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 28473041 - 28472997
Alignment:
Q  288 cagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||    
T  28473041 cagaaaaatgacagttttagggggttttagacctacccatatgct 28472997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 28636292 - 28636343
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtc 198  Q
    |||||||||||| ||||||||||||| ||||| || |||||||||| |||||    
T  28636292 ggcttaattacatttttggtcattgtattttgaccaactcacgaaattggtc 28636343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 35163615 - 35163570
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttaggc 309  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  35163615 ctcctattttcaa-ctccaaaaacacagagaaatgacagttttaggc 35163570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 28636619 - 28636582
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  28636619 tttccaactccagaaacgcacagaaatgacagttttag 28636582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 31073565 - 31073528
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  31073565 tttccaactccagaaacgcacagaaatgacagttttag 31073528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 31573848 - 31573885
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  31573848 tttccaactccagaaacgcatagaaatgacagttttag 31573885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 8e-83; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 5818932 - 5819115
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 5819031  T
Q  250 atttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819032 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 5819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 19359682 - 19359495
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19359682 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19359583  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||| ||||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  19359582 ttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacccctatgct 19359495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 8647984 - 8647797
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8647984 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 8647885  T
Q  246 ttgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||  | || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647884 ttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 8647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 144 - 332
Target Start/End: Complemental strand, 8461479 - 8461290
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  8461479 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttt 8461380  T
Q  244 tgttgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    || |||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8461379 tgctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 8461290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 144 - 332
Target Start/End: Original strand, 29454737 - 29454926
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||||||||||||    
T  29454737 taaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttt 29454836  T
Q  244 tgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    || |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  29454837 tgctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctacccatatgct 29454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 149 - 332
Target Start/End: Original strand, 2864756 - 2864940
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  249 catttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacccctatgct 2864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 18182973 - 18183156
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183072  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| | |||||||||| | || ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  18183073 atttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacccctatgct 18183156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 147 - 332
Target Start/End: Original strand, 164191 - 164376
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgt 164289  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacccctatgct 164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 24331558 - 24331747
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc--atttt 243  Q
    |||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||    
T  24331558 aggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttt 24331657  T
Q  244 tgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24331658 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 24331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 149 - 330
Target Start/End: Original strand, 14215243 - 14215425
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||  | ||||||||||||||||||||| |||| |||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  249 catttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 330  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 14215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 25000636 - 25000448
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||| ||||| ||  ||||||||||||||||||| |||||||||||||||||||||    
T  25000636 aaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcattttt 25000537  T
Q  245 gttgcatttttcgt-ccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  25000536 gttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 25000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 147 - 325
Target Start/End: Complemental strand, 15709513 - 15709335
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||| || | ||||||||| |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  247 tgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 325  Q
    |||||||||||||| || |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctaccc 15709335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 18183515 - 18183354
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18183515 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18183416  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || |||  ||| |  ||||| |||||||||||||| ||||||||||    
T  18183415 ttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttag 18183354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 5819474 - 5819314
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || ||   ||| |  ||||| ||||||| |||||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttag 5819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 16019129 - 16018946
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| |  ||||||||| ||||||||||| ||||||||| ||||||||| |||| |||| |||  ||||||||||||||||||||     
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgt 16019030  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  16019029 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 16018946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 2865301 - 2865140
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2865301 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 2865202  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    || |||||||||||| || ||   ||| |  ||||| ||||| |||||||||||||||||||    
T  2865201 tttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 2865140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 8460929 - 8461090
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8460929 aggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 8461028  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||  || ||   ||| |  ||||| ||| |||||||||||||||||||||    
T  8461029 ttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttag 8461090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 15708970 - 15709130
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  15708970 aggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 15709069  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||| |||||||| || || ||||| |  ||||| |||||||||||||||||||||||||    
T  15709070 ttgcatatttcgtcctacccccatttt-attctccaaaaacgcagagaaatgacagttttag 15709130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 8647438 - 8647598
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 8647598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 332
Target Start/End: Original strand, 15371873 - 15372060
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||||||||||| || | || |||||| |||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  249 catttttcgt-ccaactcctattttcaaactccagaaacgcagagaaatgacagtt----ttaggcggttttagacctacccctatgct 332  Q
    |||||||||| ||| ||||||||| ||||||| |||||||||||||||||| ||||    ||||||||||||||||||||| |||||||    
T  15371972 catttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagttttaattaggcggttttagacctacctctatgct 15372060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 24362382 - 24362221
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||    
T  24362382 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttg 24362283  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  24362282 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 24362221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 147 - 303
Target Start/End: Original strand, 19359136 - 19359292
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagtt 303  Q
    |||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtt 19359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 29455290 - 29455127
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  29455290 taaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttt 29455191  T
Q  244 tgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||||| || ||   ||| |  ||||| ||||| |||||||||||||||||||    
T  29455190 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 29455127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 153 - 332
Target Start/End: Original strand, 24361843 - 24362022
Alignment:
Q  153 attacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 252  Q
    |||||||||||||||    ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  253 tttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||| || ||   ||| |  ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 24362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 15372415 - 15372258
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 15372316  T
Q  250 atttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||| || | || ||| ||||| |   |||| |||||||||||||||||||||||||    
T  15372315 attttttgttctacatcccatttt-attttccaaaaacgcagagaaatgacagttttag 15372258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 14215789 - 14215628
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||| |||||||| | |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  14215789 aggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 14215690  T
Q  246 ttgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||  ||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  14215689 ttgcatttttcgtcttaacccccatttt-attctccaaaaacgtagagaaatgacagttttag 14215628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 153 - 332
Target Start/End: Original strand, 24325218 - 24325397
Alignment:
Q  153 attacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 252  Q
    |||||||||||||||    ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||| ||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  253 tttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||| || ||   ||| |  ||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttagccggttttagacctacccctatgct 24325397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 14464066 - 14463906
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||  |  || |||||||||| ||||||||||| || ||||||||||||||||     
T  14464066 aggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttta 14463967  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || || ||||| |  ||||| |||||||||||||||||||||||||    
T  14463966 ttgcatttttcgtcctaccccaatttt-attctccaaaaacgcagagaaatgacagttttag 14463906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 164737 - 164576
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||| | ||||| || |  |||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  164737 aggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 164638  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||| |||| || ||   ||| |  ||||| ||| | |||||||||||||||||||    
T  164637 ttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttag 164576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 4222266 - 4222154
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    |||||||||||||||||||| | ||||||||| || ||||||||| ||||| |||||||||||||||||||||||  |||||||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  248 gcatttttcgtcc 260  Q
    |||||||||||||    
T  4222166 gcatttttcgtcc 4222154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 16018587 - 16018701
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| || || ||||||||||||| |||||||||||||| ||||||||| ||||||    
T  16018587 aaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttt 16018685  T
Q  245 gttgcatttttcgtcc 260  Q
     ||||||||| |||||    
T  16018686 attgcattttccgtcc 16018701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 4623148 - 4623261
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||| ||||||||||  |||||||||||||||||  ||| |||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  247 tgcatttttcgtcc 260  Q
     ||||||| |||||    
T  4623248 ggcattttccgtcc 4623261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 7349562 - 7349453
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||  || |||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  247 tgcatttttc 256  Q
    |||| |||||    
T  7349462 tgcacttttc 7349453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 24332107 - 24331945
Alignment:
Q  149 cttaattacactttt-ggtcattgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcat-ttttg 245  Q
    ||||||||||||||| ||||||  ||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||| | |||||||||| |||||    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  246 ttgca-tttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||| |||||||||| || ||   ||  |  ||||| |||||||||||||||||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttag 24331945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 6019309 - 6019208
Alignment:
Q  153 attacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 252  Q
    |||||| ||||||||||  ||||||||| |||||||||||||| || ||| |||||||||||||||||||| ||| || |||||||||||||||||||||    
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  253 ttt 255  Q
    |||    
T  6019210 ttt 6019208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 165 - 307
Target Start/End: Original strand, 25000108 - 25000250
Alignment:
Q  165 gtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtccaact 264  Q
    ||||| |||||||||||||||||||||  ||||| |||||| ||||||||||| |||| |||| || ||||||||||||| |||||||||| |||| ||     
T  25000108 gtcatcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacc 25000207  T
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||   ||| |  ||||| ||||| |||||||||||||||||||    
T  25000208 ccccattttattctccaaaaacgtagagaaatgacagttttag 25000250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 7348559 - 7348672
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||| |||||||| |  |||||| | |||||||||||| ||||| ||||||||||||||||||||||||  || |||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  247 tgcatttttcgtcc 260  Q
    |||| |||||||||    
T  7348659 tgcacttttcgtcc 7348672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 14462683 - 14462770
Alignment:
Q  226 tcattcaattatcatttttgttgcatttttcgtcc-aactcctattttcaaactc----cagaaacgcagagaaatgacagttttagg 308  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    |||||||| ||||||||||||||||||||    
T  14462683 tcattcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttagg 14462770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 6018315 - 6018426
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    ||||||||||| |||||||  | ||||||||  |||||||||||||||||| || ||||||||||||||||||||   || |||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattatc-ttcaattatcatttttgtt 6018413  T
Q  248 gcatttttcgtcc 260  Q
    ||| |||| ||||    
T  6018414 gcagttttagtcc 6018426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 10721873 - 10721967
Alignment:
Q  235 tatcatttttgttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctat 329  Q
    |||||| ||| ||||| |||| |||| || |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctacccctat 10721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 4219663 - 4219776
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||||||||| || | ||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   ||| || | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  247 tgcatttttcgtcc 260  Q
    ||||||||||||||    
T  4219763 tgcatttttcgtcc 4219776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 27307177 - 27307238
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 325  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  27307177 ctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctaccc 27307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 4624746 - 4624657
Alignment:
Q  171 gtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcc 260  Q
    |||||||  ||||||||||||| ||||| || |  ||||||||| ||||||||  ||||||||||||||||| |||||||||||||||||    
T  4624746 gtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcc 4624657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 28494931 - 28495029
Alignment:
Q  235 tatcatttttgttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc-cctatgct 332  Q
    |||||| ||| ||||| |||| |||| || |||||||||||| |||||||||||||||||| ||||| |||||||  |||||||||||||| ||||||||    
T  28494931 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaagtgacaattttaggtagttttagacctaccacctatgct 28495029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 41834607 - 41834430
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat-ttt 243  Q
    ||||||||||||||||||||||| | |  ||||| ||  ||||||||| ||||||||||  ||| | |  ||||||||| ||| |  || |||||| |||    
T  41834607 aaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtccta-aactatcatgttt 41834509  T
Q  244 tgttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagaccta 322  Q
    | ||||| |||| |||| || |||||||||||| |||  |||||||||||||||||||||||||| |  |||||||||||    
T  41834508 ttttgcagttttagtcctacctcctattttcaa-ctcttgaaacgcagagaaatgacagttttagacaattttagaccta 41834430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 325
Target Start/End: Complemental strand, 16753120 - 16752938
Alignment:
Q  143 ataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat-- 240  Q
    ||||| |||||||||| |||||||||| |  ||||| || |||||||||| |||| |||||  ||| |||  |||| ||||  || |  |||||||||      
T  16753120 ataagacttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaacgaaaccatccta-aattatcatgt 16753022  T
Q  241 ttttgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 325  Q
    |||| ||||| |||| | || ||||||||||||||| ||||||||||||||| ||||| ||||||||||| | |||||||||||||    
T  16753021 tttttttgcagttttagacctaactcctattttcaa-ctccagaaacgcagaaaaatggcagttttaggcag-tttagacctaccc 16752938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 13814226 - 13814159
Alignment:
Q  198 cctgcccttttaaaacagaacaaaacggtcat-----tcaattatcatttttgttgcatttttcgtcc 260  Q
    |||||||||||||| ||||||||||| |||||     ||||||||||||||||||||| |||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcc 13814159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 20524529 - 20524586
Alignment:
Q  65 aagagaaattctaatatggttacattatcaaataaaaagtgtttgaccatacacacat 122  Q
    |||||||||||||||||| | |||| |||||||||||||||||||  || ||||||||    
T  20524529 aagagaaattctaatatgatcacatgatcaaataaaaagtgtttggtcacacacacat 20524586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 32697771 - 32697719
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    ||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcct 32697719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 332
Target Start/End: Original strand, 14463732 - 14463763
Alignment:
Q  301 gttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||||||||||||||||||||    
T  14463732 gttttaggcggttttagacctacccctatgct 14463763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 20654461 - 20654516
Alignment:
Q  67 gagaaattctaatatggttacattatcaaataaaaagtgtttgaccatacacacat 122  Q
    |||||||||||||||||| |||| | |||||||||||||||| | || ||||||||    
T  20654461 gagaaattctaatatggtcacatgaccaaataaaaagtgtttcatcaaacacacat 20654516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 28290191 - 28290030
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| |    ||||| || |||||||||| |||||||  | |||| |||  ||||||||  ||| || || ||| || |||     
T  28290191 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactat-atgtttt 28290093  T
Q  246 ttgcatttttcgtccaa-ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||| |||| |||| | ||||   |||| ||||||||||||||| |||||||||||||||||    
T  28290092 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28290030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 15029732 - 15029695
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||||||| | |||||||||||||||    
T  15029732 tttcaaactccagaaacgcacataaatgacagttttag 15029695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 28289807 - 28289844
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  28289807 tttccaactccagaaacgcacagaaatgacagttttag 28289844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 27307487 - 27307444
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||    
T  27307487 ctcctattttcaa-ctccagaaatgcagagaaatgacatttttag 27307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 28495270 - 28495227
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||||    
T  28495270 ctcctattttcaa-ctccagaaccgcagagaaatgatagttttag 28495227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 32305945 - 32305977
Alignment:
Q  275 aactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| ||||||||||||||||||||    
T  32305945 aactccagaaacacagagaaatgacagttttag 32305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 36442702 - 36442658
Alignment:
Q  67 gagaaattctaatatggttacattatcaaataaaaagtgtttgac 111  Q
    |||||||| ||||||||| |||| | |||||||||||||||||||    
T  36442702 gagaaattttaatatggtcacatgaccaaataaaaagtgtttgac 36442658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 3e-82; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 147 - 332
Target Start/End: Original strand, 22434179 - 22434365
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    || ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 22434365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 20471057 - 20470870
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  20471057 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttg 20470958  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20470957 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatgct 20470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 147 - 332
Target Start/End: Complemental strand, 45082969 - 45082783
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 45082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 15523234 - 15523421
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||     
T  15523234 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttt 15523333  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15523334 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 15523421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 147 - 332
Target Start/End: Original strand, 46193405 - 46193591
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 46193591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 23494989 - 23494802
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23494989 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23494890  T
Q  246 ttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| || ||||||| |||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||    
T  23494889 ttgcatttttcgtcctacatcctattctcaaactccagaaacgtaaagaaatggcaattttaggcggttttagacctacccctatgct 23494802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 147 - 332
Target Start/End: Original strand, 25447247 - 25447433
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| | ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctacccatatgct 25447433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 147 - 332
Target Start/End: Complemental strand, 12234874 - 12234688
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| | ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacccctatgct 12234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 11153144 - 11153332
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||||||||||| |||||||||| | |||||||||||||||||| ||| ||||| ||||||||||||| |||| ||||||||| ||||||||||||||||    
T  11153144 aaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcattttt 11153243  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11153244 gttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 11153332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 25938218 - 25938030
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  25938218 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 25938119  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| |||| | |||||||||||||||||||||||| || ||||||| |||||||| ||||||||||||||||| |||||||    
T  25938118 gttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 25938030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 150 - 332
Target Start/End: Complemental strand, 4220101 - 4219918
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 4220002  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| | |||||||||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  4220001 atttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacccacccctatgct 4219918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 54995072 - 54995255
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 54995171  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| | ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||    
T  54995172 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctacccttatgct 54995255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 18751597 - 18751785
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| |||||||||||||||||| | |||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcattttt 18751696  T
Q  245 gttgcatttttcgt-ccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  18751697 gttgcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacccctatgct 18751785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 145 - 327
Target Start/End: Complemental strand, 48526728 - 48526545
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| ||||||| |||||||||| | ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  48526728 aaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcactttt 48526629  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 327  Q
    |||||||||||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  48526628 gttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctacccct 48526545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 51021341 - 51021155
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||||||||| || | |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || |||||||| |||||    
T  51021341 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttg 51021243  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  51021242 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacccctatgct 51021155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 149 - 332
Target Start/End: Original strand, 2118295 - 2118480
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  249 catttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctac-ccctatgct 332  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctactccctatgct 2118480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 171 - 332
Target Start/End: Original strand, 12503460 - 12503622
Alignment:
Q  171 gtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtccaac-tcctat 269  Q
    |||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||| || ||||||    
T  12503460 gtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctat 12503559  T
Q  270 tttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  12503560 tttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 12503622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 25447782 - 25447621
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25447782 aggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 25447683  T
Q  246 ttgcatttttcgtccaactc-ctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || | | ||||| |  ||||| |||||||||||||| ||||||||||    
T  25447682 ttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaattacagttttag 25447621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 141 - 306
Target Start/End: Original strand, 12234323 - 12234488
Alignment:
Q  141 taataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 240  Q
    |||| |||||||||||||||||||||| |  ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12234323 taattaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 12234422  T
Q  241 ttttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagtttta 306  Q
    |||||||||||||||||||| || ||   ||| |  ||||| |||||||||||||| |||||||||    
T  12234423 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 22434718 - 22434563
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttgttgc 22434620  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| || || ||||| |  ||||| |||||||||||||||||||||||||    
T  22434619 atttttcgtcctacccccatttt-attctccaaaaacgcagagaaatgacagttttag 22434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 143 - 307
Target Start/End: Complemental strand, 15523783 - 15523619
Alignment:
Q  143 ataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 242  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||||    
T  15523783 ataaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcattt 15523684  T
Q  243 ttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||||| || ||   ||| |  ||||| ||||||| |||||||||||||||||    
T  15523683 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttag 15523619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 33109681 - 33109844
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||| |||||||||| |||||||| | |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  33109681 taagacttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttt 33109780  T
Q  244 tgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  33109781 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 33109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 11153692 - 11153532
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  247 tgcatttttcgtccaactc-ctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || | | ||||| |  ||||| |||||||||||||| ||||||||||    
T  11153592 tgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaataacagttttag 11153532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 25937669 - 25937830
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25937669 aggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 25937768  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||| ||||   | || ||||| |  ||||| |||||||||||||||||||||||||    
T  25937769 ttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 25937830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 46193948 - 46193790
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  249 catttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| || ||   ||| |  ||||| ||||| |||||| ||||||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttag 46193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 48526195 - 48526355
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||  | |||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || || ||||| |  ||||| ||| |||||||||||||||||||||    
T  48526295 ttgcatttttcgtcctacccccatttt-attctccaaaaatgcagagaaatgacagttttag 48526355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 2118842 - 2118681
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| |||||||||||||||||| | |||||||||||| |||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  2118842 aaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcattttt 2118743  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || || ||||| |  ||||| |||||||||||||| | ||||||||    
T  2118742 gttgcatttttcgtcctacccccatttt-attctccaaaaacgcagagaaataatagttttag 2118681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 22170483 - 22170322
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | |||||||| |||||| |||||| || ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  22170483 aaggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcattttt 22170385  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  22170384 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 22170322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 23494445 - 23494603
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||||| |||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  249 catttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| || ||   ||| |  ||||| | |||||||||||||||||||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttag 23494603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 38962362 - 38962204
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||||| |||||||| | ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  249 catttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| || ||   ||| |  || || |||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttag 38962204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 4219559 - 4219716
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||||| |||||||| | ||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||| ||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  249 catttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagtttta 306  Q
    |||||||||||| || ||   ||| |  ||||| ||||||||||||||||||||||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 18764063 - 18763952
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||||||||||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttg 18763964  T
Q  249 catttttcgtcc 260  Q
    ||||||||||||    
T  18763963 catttttcgtcc 18763952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 33110010 - 33109883
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| |  ||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  33110010 aggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 33109911  T
Q  246 ttgcatttttcgtcc-aactcctatttt 272  Q
    ||||||||||||||| | ||||||||||    
T  33109910 ttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 45082435 - 45082590
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||| ||||||||||| ||||||||| ||||||||||| |||||  ||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  45082435 ttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 45082533  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| || || ||||| |  ||||| |||| ||||||||||||| ||||||    
T  45082534 atttttcgtcctacccccatttt-attctccaaaaacacagagaaatgacaattttag 45082590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 51020796 - 51020957
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||||||||| || |  |||||||||  | |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  51020796 aggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttg 51020895  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  || || ||||| |||||||||||||||||||    
T  51020896 ttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttag 51020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 35363146 - 35363034
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| |||| | ||||||||||||||||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  246 ttgcatttttcgt 258  Q
    |||||||||||||    
T  35363046 ttgcatttttcgt 35363034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 54995609 - 54995500
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| ||||| ||||| |||||||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgc 54995511  T
Q  250 atttttcgtcc 260  Q
    |||||||||||    
T  54995510 atttttcgtcc 54995500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 148 - 255
Target Start/End: Complemental strand, 20958403 - 20958296
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    |||||||||||||||| ||| | || ||||||||||||||||||| ||||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  248 gcattttt 255  Q
    ||||||||    
T  20958303 gcattttt 20958296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 48708294 - 48708401
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||||||||||||  ||||||||||||||  ||||||| || |||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  48708294 aggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttg 48708393  T
Q  246 ttgcattt 253  Q
    ||||||||    
T  48708394 ttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 48295088 - 48294979
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||| |||||||||| ||||||||  |||||||||||| ||||| ||||  ||||||||| |||||||  ||||||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  247 tgcatttttc 256  Q
    ||||||||||    
T  48294988 tgcatttttc 48294979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 10258436 - 10258324
Alignment:
Q  143 ataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 242  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||| |||| |||||||||||||||||||||||  ||||  ||  ||||||||||||||    
T  10258436 ataaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcattt 10258337  T
Q  243 ttgttgcattttt 255  Q
    |||||||| ||||    
T  10258336 ttgttgcagtttt 10258324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 44892692 - 44892580
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    ||||||||| | |||||||| | |||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  ||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  248 gcatttttcgtcc 260  Q
    |||||||||||||    
T  44892592 gcatttttcgtcc 44892580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 16690934 - 16691049
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| ||||||||| |||||||| ||||||||||  |||||||||||| ||||||||||  ||||||||| |||||||   || ||||||||||||||||    
T  16690934 aaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcattttt 16691033  T
Q  245 gttgcatttttcgtcc 260  Q
    ||||||||||||||||    
T  16691034 gttgcatttttcgtcc 16691049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 43243801 - 43243712
Alignment:
Q  171 gtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcc 260  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||  ||||||||||||||||||||||||||| ||||    
T  43243801 gtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcc 43243712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 48293593 - 48293703
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||| || ||||| |  ||||||||| |||||||  ||  |||||||||||||||||    
T  48293593 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttg 48293692  T
Q  246 ttgcatttttc 256  Q
    |||||||||||    
T  48293693 ttgcatttttc 48293703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 48713888 - 48713778
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||||||||  |  | ||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  ||| |||||||||||||||||||||    
T  48713888 ttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgc 48713789  T
Q  250 atttttcgtcc 260  Q
    |||||||||||    
T  48713788 atttttcgtcc 48713778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 16318323 - 16318251
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaa 217  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||||||||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 44890518 - 44890626
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    ||||||||||| |||||||| |||||||||| |||| |||||||| ||||| |||||||||||||||||||||||   || || ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  248 gcatttttc 256  Q
    |||||||||    
T  44890618 gcatttttc 44890626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 43281311 - 43281223
Alignment:
Q  171 gtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcc 260  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||  ||||||||| ||||||||||||||||||||||    
T  43281311 gtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcc 43281223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 16691616 - 16691505
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||||||||| ||  ||||||||| ||||||||||||| |||||||| ||| || ||||| |||||||  ||| || |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctg-cctctttaaacataacaaaattgtcctttaattattatttttgt 16691518  T
Q  247 tgcatttttcgtc 259  Q
    |||||||||||||    
T  16691517 tgcatttttcgtc 16691505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 43242328 - 43242383
Alignment:
Q  205 ttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcc 260  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcc 43242383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 259
Target Start/End: Original strand, 20957196 - 20957301
Alignment:
Q  154 ttacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcattt 253  Q
    ||||| |||||||| | | |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  ||| ||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  254 ttcgtc 259  Q
    ||||||    
T  20957296 ttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 12503913 - 12503821
Alignment:
Q  215 gaacaaaacggtcattcaattatcatttttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||  || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttag 12503821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 17503971 - 17504133
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    ||||||||||||| ||| |||||| | |  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||| ||| ||| |  || |||||| ||    
T  17503971 taaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgtt 17504069  T
Q  244 tgttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    | ||||| |||| |||| || |||||||||||| ||||||||||| |||||||||||||||||||    
T  17504070 ttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttag 17504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 255
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||| | ||||| || | |||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| |||||||||||||||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  247 tgcattttt 255  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 55677507 - 55677451
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||||||||||||||||||||||| |||| ||||| || |||||||||| |||||||    
T  55677507 taaggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 10795730 - 10795692
Alignment:
Q  288 cagagaaatgacagttttaggcggttttagacctacccc 326  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  10795730 cagagaaatgacagttttaggcagttttagacctacccc 10795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 17504389 - 17504345
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||  ||||| |||||||||||||||||||||||||||    
T  17504389 ctcctatttttcaactctagaaacgcagagaaatgacagttttag 17504345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 35193424 - 35193467
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| || ||||||||||||||||||||||||||||    
T  35193424 ctcctattttcaa-cttcagaaacgcagagaaatgacagttttag 35193467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 39503431 - 39503487
Alignment:
Q  66 agagaaattctaatatggttacattatcaaataaaaagtgtttgaccatacacacat 122  Q
    ||||||||| ||||||||| |||| || ||||||||||||||||| || ||||||||    
T  39503431 agagaaattttaatatggtcacatgattaaataaaaagtgtttgatcacacacacat 39503487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 12593143 - 12593184
Alignment:
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  12593143 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 12593184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 319
Target Start/End: Complemental strand, 40160633 - 40160465
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||| |||||||| |||  ||||| || |||||||||| | ||| ||||  ||| |||  ||||||||| ||| |  || |||||| ||| ||||    
T  40160633 ttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtccta-aactatcatgttttttgc 40160535  T
Q  250 atttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagac 319  Q
    | |||| |||  || |||||||||||| ||||||||||| |||||||   ||||||||||| |||||||||    
T  40160534 agttttagtcttacctcctattttcaa-ctccagaaacgtagagaaaatgcagttttaggcagttttagac 40160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 44220861 - 44220811
Alignment:
Q  208 taaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgt 258  Q
    |||||||||||||||  ||| |||| |||||||||||||| ||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgt 44220811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 46736774 - 46736815
Alignment:
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  46736774 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 46736815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 46737202 - 46737148
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||||||||||||||||||||| |||  ||||| || |||||||||| |||||||    
T  46737202 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 46737148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 14439951 - 14439988
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  14439951 tttccaactccagaaacgcacagaaatgacagttttag 14439988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 26974407 - 26974444
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  26974407 tttccaactccagaaacgcacagaaatgacagttttag 26974444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 45838970 - 45838933
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  45838970 tttccaactccagaaacgcacagaaatgacagttttag 45838933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 12593570 - 12593518
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtc 198  Q
    |||||||||||||||||||||| |||  ||||| || |||||||||| |||||    
T  12593570 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 12593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 21034786 - 21034730
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    ||||||||||||||| |||||||| |||  ||||| || |||||||||| |||||||    
T  21034786 taaggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcct 21034730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 307
Target Start/End: Complemental strand, 46737073 - 46737041
Alignment:
Q  275 aactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| |||||||||||||||||    
T  46737073 aactccagaaacgcacagaaatgacagttttag 46737041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 54440564 - 54440624
Alignment:
Q  140 ataataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||| ||| ||||||||||||||||||| |||  ||||| || |||||||||| |||||||    
T  54440564 ataaaaagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 54440624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 3e-82; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 147 - 332
Target Start/End: Complemental strand, 37727475 - 37727289
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 37727289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 43973986 - 43973799
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43973986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 43973887  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43973886 ttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 43973799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 145 - 325
Target Start/End: Original strand, 39555576 - 39555757
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  39555576 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcattttt 39555675  T
Q  245 gttgcatttttcg-tccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 325  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39555676 gttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 31778651 - 31778839
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  31778651 aaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcattttt 31778750  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31778751 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccgtatgct 31778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 4275910 - 4275723
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||    
T  4275910 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttg 4275811  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4275810 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 4275723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 29801962 - 29801775
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||||||||| || | || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29801962 aggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 29801863  T
Q  246 ttgcatttttcgt-ccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||    
T  29801862 ttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacctctatgct 29801775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 144 - 332
Target Start/End: Original strand, 27393658 - 27393847
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  27393658 taaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 27393757  T
Q  244 tgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27393758 tgttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 27393847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 141 - 332
Target Start/End: Complemental strand, 5137532 - 5137340
Alignment:
Q  141 taataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 240  Q
    |||| |||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||| ||||||||| |||| ||||||||||||    
T  5137532 taattaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcat 5137433  T
Q  241 ttttgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5137432 ttttgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccccatgct 5137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 20841108 - 20840920
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  20841108 aaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattttt 20841009  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  20841008 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagatatacccctatgct 20840920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 17464490 - 17464677
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  17464490 aggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 17464589  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  17464590 ttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacccctatgct 17464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 147 - 332
Target Start/End: Original strand, 25853234 - 25853420
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  247 tgcatttttcg-tccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| || | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagacctatccctatgct 25853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 22424813 - 22425000
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||  | ||||||  ||||||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||    
T  22424813 aggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttg 22424912  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22424913 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 22425000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 147 - 332
Target Start/End: Complemental strand, 23645010 - 23644823
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||| |||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacct-acccctatgct 332  Q
    |||||||||| ||| | ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttagacctaacccctatgct 23644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 150 - 324
Target Start/End: Original strand, 26837363 - 26837538
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||| |||||||| |||| ||||||||||||||||||| |||||||||||||||| |||| ||| |||||||| |||||||||||||||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgc 26837462  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 324  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26837463 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 142 - 330
Target Start/End: Complemental strand, 30098313 - 30098121
Alignment:
Q  142 aataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 241  Q
    |||||||||||||||||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  30098313 aataaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatt 30098214  T
Q  242 tttgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttag---acctacccctatg 330  Q
    ||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||   |||||||||||||    
T  30098213 tttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttaggcggttttagatcacctacccctatg 30098121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 32534957 - 32535145
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| |||||||||||||||||| | |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  32534957 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattttt 32535056  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||| | ||||||||||||||||| |||| | ||||||||||||||||||||||||||||| |||| ||||||||||    
T  32535057 gttgcatttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttaggcggttttataccttcccctatgct 32535145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 24300555 - 24300742
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| ||||||||| |||||||| | |||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||    
T  24300555 aaggtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcattttt 24300653  T
Q  245 gttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24300654 gttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 24300742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 26274565 - 26274753
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| ||||||||| ||||| || |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26274565 aaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 26274664  T
Q  245 gttgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||  |||||||    
T  26274665 gttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctacgtctatgct 26274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 172 - 330
Target Start/End: Complemental strand, 41047218 - 41047060
Alignment:
Q  172 tgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtccaac-tcctatt 270  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| || |||||||    
T  41047218 tgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgcatttttcgtcctacctcctatt 41047120  T
Q  271 ttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 330  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  41047119 ttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccatatg 41047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 31779198 - 31779037
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31779198 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 31779099  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| ||||||||||||||| |||||||||    
T  31779098 ttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttag 31779037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 139 - 302
Target Start/End: Original strand, 48452981 - 48453144
Alignment:
Q  139 aataataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc 238  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  48452981 aataattaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatc 48453080  T
Q  239 atttttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagt 302  Q
    |||||||||||||||||||||| || ||   ||| |  ||||| ||||||||||||||||||||    
T  48453081 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 39556122 - 39555962
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 39555962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 20840559 - 20840720
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||    
T  20840559 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttg 20840658  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||  |||||||||||||||||||||||||    
T  20840659 ttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttag 20840720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 5136983 - 5137140
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 5137082  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  5137083 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 5137140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 32535508 - 32535344
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc-----att 241  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  242 tttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||||||| || || ||||| |  ||||| |||||||||||||||| ||||||||    
T  32535408 tttgttgcatttttcgtcctacccccatttt-attctccaaaaacgcagagaaatgatagttttag 32535344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 41046703 - 41046860
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 41046860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 37726927 - 37727089
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||| || || ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  37726927 aaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcattttt 37727026  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  37727027 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 37727089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 24301102 - 24300941
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| ||| | |||||||||||    
T  24301102 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttg 24301003  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  24301002 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 24300941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 143 - 307
Target Start/End: Complemental strand, 27394126 - 27393962
Alignment:
Q  143 ataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 242  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||| |||||||||||||||||||| || ||||||||||||||    
T  27394126 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcattt 27394027  T
Q  243 ttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| | ||| || || | ||| |  ||||| |||||||||||||| ||||||||||    
T  27394026 ttgttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttag 27393962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 29801356 - 29801468
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  247 tgcatttttcgtc 259  Q
    |||||||||||||    
T  29801456 tgcatttttcgtc 29801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 23644460 - 23644622
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | || ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||    
T  23644460 aaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcattttt 23644559  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || ||   ||| |  ||||| |||||||||||||| | ||||||||    
T  23644560 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttag 23644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 30104481 - 30104641
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| || | ||||||| |||||||||||||||||    
T  30104481 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttg 30104580  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || || ||||| |   || | |||||||||||||||||||||||||    
T  30104581 ttgcatttttcgtcctacccccatttt-attatctaaaaacgcagagaaatgacagttttag 30104641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 26837901 - 26837741
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||| |||||||||||    
T  26837901 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc-tttaaaatagaacaaaacggtcattcaagtatcatttttg 26837803  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||| |||| || ||   ||| |  ||||| ||| |||||||||||||||||||||    
T  26837802 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttag 26837741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 43973441 - 43973601
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||| ||||||||||||| || |  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || ||   ||| |  ||||| ||||||||| |||| ||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttag 43973601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 25612519 - 25612409
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  250 atttttcgtcc 260  Q
    |||||||||||    
T  25612419 atttttcgtcc 25612409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 25853770 - 25853612
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||||||||||| || | ||||||||  |||||||||||||||||| || | |||||||||||||||||| |||| ||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  249 catttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| || ||   ||| |  ||||| |||||||||||||| ||||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttag 25853612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 139 - 307
Target Start/End: Complemental strand, 17465045 - 17464876
Alignment:
Q  139 aataataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc 238  Q
    |||||||||||||||||||| |||||||| | |||||||||||||| || ||||||||||   ||||||||||| |||||||||||||| ||||||||||    
T  17465045 aataataaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatc 17464946  T
Q  239 atttttgttgcat-ttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| |||| |||| || ||   ||| |  ||||| ||| |||||||||||||||||||||    
T  17464945 atttttgttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttag 17464876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 151 - 260
Target Start/End: Complemental strand, 22425354 - 22425245
Alignment:
Q  151 taattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 250  Q
    ||||||||||||||||| | |||||| |||||||||||||| |||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  251 tttttcgtcc 260  Q
    ||||||||||    
T  22425254 tttttcgtcc 22425245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 26275108 - 26274952
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||| | |||||| | |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||||    
T  26275108 ttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc 26275009  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
     |||||||||| || ||   ||| |  ||||| || ||||||||||||||||||||||    
T  26275008 -tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttag 26274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 50116954 - 50116841
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||||||||| || | |||||||| | ||||||||||| ||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  247 tgcatttttcgtcc 260  Q
    |||| |||||||||    
T  50116854 tgcaattttcgtcc 50116841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 23228552 - 23228440
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||||||||||||   |||||||||||||||||||||| || || |||||||||||||| ||||||||  ||| |||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  247 tgcatttttcgtcc 260  Q
    ||||||||||||||    
T  23228453 tgcatttttcgtcc 23228440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 51473429 - 51473541
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    |||||||||||||||||||| | ||||||||| ||| |||||||| |||||||||||||||||||||||||||||  ||| |||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  248 gcatttttcgtcc 260  Q
    ||| |||| ||||    
T  51473529 gcacttttggtcc 51473541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 51474880 - 51474766
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||    |||||||||| ||||||||||| ||||| ||||||||||||||| |||||||  ||| || | ||||||||||||    
T  51474880 aggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttg 51474781  T
Q  246 ttgcatttttcgtcc 260  Q
    |||||||||||||||    
T  51474780 ttgcatttttcgtcc 51474766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 32697244 - 32697132
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    ||||||||| | |||||||| | ||||||| |||||||||||||| | |||  ||||||||||||||||||||||  ||  |||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  248 gcatttttcgtcc 260  Q
    |||||||||||||    
T  32697144 gcatttttcgtcc 32697132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 18010265 - 18010177
Alignment:
Q  172 tgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcc 260  Q
    |||||| | |||||||||||| |||| | ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  18010265 tgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcc 18010177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 45965937 - 45966049
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||  |  |||||| ||||||||||| |||||||  ||| ||| |||||||||| ||    
T  45965937 aggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtg 45966036  T
Q  246 ttgcatttttcgt 258  Q
    |||||||||||||    
T  45966037 ttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 259
Target Start/End: Complemental strand, 25420684 - 25420574
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||||||||||| |||| || ||||| ||||||||||||| || ||  |||||||||||| |||| ||||  ||| ||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  249 catttttcgtc 259  Q
    |||||||||||    
T  25420584 catttttcgtc 25420574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 37222117 - 37222040
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaac 223  Q
    |||||||||||||||||||||| | |||||||| ||||||||| ||| |||||||||| |||||||||||||||||||    
T  37222117 aggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaac 37222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 37220556 - 37220670
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | || ||||||||||||||| | |  | || ||| |||||||||||||| ||||  ||| |||| ||||||||||||    
T  37220556 aggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttg 37220655  T
Q  246 ttgcatttttcgtcc 260  Q
    ||||| |||||||||    
T  37220656 ttgcacttttcgtcc 37220670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 25419145 - 25419242
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggt-cattcaattatcattttt 244  Q
    |||| |||| |||||||||| | ||||||| || ||||||||||| | || ||||||||||||||||||||||||| || | ||||||||||||||||    
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 8873807 - 8873869
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccc 326  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||  |||| ||||||||||    
T  8873807 ctcctattttcaa-cttcagaaacgcagagaaatgacagttttaggcaattttggacctacccc 8873869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 27200238 - 27200078
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| |||  ||||| ||  ||||||||| |||| |||||  ||| |||  |||||| || ||| |  || |||||| |||     
T  27200238 aggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtttt 27200140  T
Q  246 ttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||| |||| |||  || |||||||||||| ||||||||||||||||||||||||| |||||    
T  27200139 ttgcagttttagtcatacctcctattttcaa-ctccagaaacgcagagaaatgacaggtttag 27200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 23227259 - 23227369
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    ||||||| ||||| ||||||||||  ||||||||||| ||||||||||| ||||||      | | ||||||||||||   ||| | ||||| |||||||    
T  23227259 taaggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcc------tctgaaacagaacaaatttgtcctccaattttcatttt 23227352  T
Q  244 tgttgcatttttcgtcc 260  Q
    |||||||||||||||||    
T  23227353 tgttgcatttttcgtcc 23227369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 51827955 - 51828117
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct-gcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    ||||||||||||||||||||||| |||  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||  | || ||| || ||    
T  51827955 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgtt 51828052  T
Q  244 tgttgcatttttcgtcc-aact-cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    | |||||||||| |||| | || ||||||||| ||||||||||||||| | |||||||||||||||    
T  51828053 ttttgcatttttagtcctatctccctattttc-aactccagaaacgcacataaatgacagttttag 51828117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 55192234 - 55192277
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  55192234 ctcctattttcaa-ctccagaaacgcagagaaatgacagttttag 55192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 50900652 - 50900710
Alignment:
Q  266 ctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 325  Q
    |||||||||| ||| ||||||  ||||||||||||||||||||| |||||||||||||||    
T  50900652 ctattttcaa-ctctagaaacatagagaaatgacagttttaggcagttttagacctaccc 50900710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 32730812 - 32730775
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||||||| |||||||||||||||||    
T  32730812 tttcaaactccagaaacgcacagaaatgacagttttag 32730775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 2323466 - 2323553
Alignment:
Q  235 tatcatttttgttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagaccta 322  Q
    |||||| ||| ||||| |||| |||| || |||||||||||| |||||||||| | || |||||||||||||||||  |||||||||||    
T  2323466 tatcatgttttttgcaattttagtcctacctcctattttcaa-ctccagaaacacggataaatgacagttttaggcaattttagaccta 2323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 37076101 - 37076034
Alignment:
Q  266 ctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagaccta-cccctatgct 332  Q
    |||||||  ||||| ||||||| ||||||||| ||||||||||| ||||||||| || ||||||||||    
T  37076101 ctattttttaactctagaaacgtagagaaatggcagttttaggcagttttagacttatcccctatgct 37076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 32695706 - 32695816
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||| |||||||| |  | |||||||||||| |||||| || |  || | ||||||||||||||||||  ||| | | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  250 atttttcgtcc 260  Q
    | |||| ||||    
T  32695806 aattttagtcc 32695816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 45805455 - 45805497
Alignment:
Q  67 gagaaattctaatatggttacattatcaaataaaaagtgtttg 109  Q
    |||||||||||||||||| |||| | |||||||||||||||||    
T  45805455 gagaaattctaatatggtcacatgaccaaataaaaagtgtttg 45805497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 50662839 - 50662798
Alignment:
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  50662839 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 50662798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 52236935 - 52236976
Alignment:
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  52236935 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 52236976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 40275218 - 40275255
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  40275218 tttctaactccagaaacgcacagaaatgacagttttag 40275255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 40838775 - 40838812
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  40838775 tttccaactccagaaacgcacagaaatgacagttttag 40838812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 40839075 - 40839038
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  40839075 tttctaactccagaaacgcacagaaatgacagttttag 40839038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 47431820 - 47431857
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  47431820 tttctaactccagaaacgcacagaaatgacagttttag 47431857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 51828380 - 51828343
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  51828380 tttccaactccagaaacgcatagaaatgacagttttag 51828343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 52375450 - 52375487
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  52375450 tttctaactccagaaacgcatagaaatgacagttttag 52375487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 52375754 - 52375717
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  52375754 tttccaactccagaaacgcacagaaatgacagttttag 52375717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 55389728 - 55389765
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  55389728 tttccaactccagaaacgcacagaaatgacagttttag 55389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 36701225 - 36701268
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||    
T  36701225 ctcctattttcaa-ctccagaaacgcagataaatgacaattttag 36701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 37075816 - 37075848
Alignment:
Q  275 aactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||||||||||||| |||||||    
T  37075816 aactccagaaacgcagagaaatgaccgttttag 37075848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 49407912 - 49407955
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||    
T  49407912 ctcctattttcaa-ctccaaaaacgcagagaaatgacaattttag 49407955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 5e-81; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 18450828 - 18451016
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
     |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18450928 tttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 18451016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 149 - 332
Target Start/End: Original strand, 40815347 - 40815531
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  249 catttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 40815531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 22374871 - 22374684
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  22374871 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22374772  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  22374771 ttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagaccttcccctatgct 22374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 11091066 - 11090879
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||    
T  11091066 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattg 11090967  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||    
T  11090966 ttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctacccatatgct 11090879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 43058878 - 43058692
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| |||||    
T  43058878 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttg 43058780  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43058779 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 43058692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 145 - 330
Target Start/End: Complemental strand, 40027687 - 40027501
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40027687 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 40027588  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 330  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  40027587 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctacccatatg 40027501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 28617161 - 28616973
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcattttt 28617062  T
Q  245 gttgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  28617061 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattttagacctacccctatgct 28616973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 7446892 - 7446705
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||| ||||| || | |||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7446892 aggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 7446793  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  7446792 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctactcatatgct 7446705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 1978655 - 1978468
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1978655 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 1978556  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||| |||| | ||||||||||||||||| |||||| || ||||||| |||||||| ||||||||||||||||| |||||||    
T  1978555 ttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 1978468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 139 - 332
Target Start/End: Complemental strand, 239905 - 239711
Alignment:
Q  139 aataataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc 238  Q
    ||||| || ||||| |||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  239905 aataagaaagcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatc 239806  T
Q  239 atttttgttgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| |||||||||  | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  239805 atttttgttgcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctaactctatgct 239711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 150 - 325
Target Start/End: Original strand, 8425358 - 8425533
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| | || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 325  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctaccc 8425533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 26538625 - 26538463
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  26538625 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttg 26538526  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| | | || |||||||||| |||||||||||||||||||||||||||||    
T  26538525 ttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttag 26538463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 147 - 332
Target Start/End: Complemental strand, 3026006 - 3025822
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  247 tgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| ||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctacccatatgct 3025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 239352 - 239512
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  239352 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctg-ccttttaaaacagaacaaaacggtccttcaattatcatttttg 239450  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  239451 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 239512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 149 - 332
Target Start/End: Complemental strand, 14432684 - 14432500
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||||| |||||||| | ||||||||||||||||| |||||||||| |||| ||||||||||||| |||| |||  ||||||||| ||||||||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  249 catttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  14432584 catttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcgaatttagacctacccttatgct 14432500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 40027137 - 40027300
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  40027137 taaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 40027236  T
Q  244 tgttgcatttttcgtccaactc-ctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| |||| || | | ||||| |  ||||| |||||||||||||||||||||||||    
T  40027237 tgttgcattttttgtcctaccctccatttt-attctccaaaaacgcagagaaatgacagttttag 40027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 11090524 - 11090681
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11090623  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  11090624 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 11090681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 1978107 - 1978268
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1978107 aggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 1978206  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||| ||||   | || ||||| |  ||||| |||||||||||||||||||||||||    
T  1978207 ttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 1978268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 22374319 - 22374480
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  22374319 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22374418  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| ||||||| |||||||| ||||||||    
T  22374419 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttag 22374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 40815887 - 40815730
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||  |||||||||||||||||||||||||| | |||||||||||||||||||||    
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgc 40815788  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  40815787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 40815730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 26538094 - 26538257
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  26538094 taaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttt 26538193  T
Q  244 tgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||||| || ||   ||| |  ||||| |||| ||||||||| ||||||||||    
T  26538194 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttag 26538257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 145 - 303
Target Start/End: Original strand, 7446340 - 7446497
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||||||||||||||||||| || | ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 7446439  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagtt 303  Q
     ||||||||||||||  || || ||||| |  ||||| |||||||||||||||||||||    
T  7446440 attgcatttttcgtcatacccccatttt-attctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 20440577 - 20440463
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20440577 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttg 20440478  T
Q  246 ttgcatttttcgtcc 260  Q
    ||||| |||||||||    
T  20440477 ttgcagttttcgtcc 20440463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 8425902 - 8425745
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||  ||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||  || || | ||| |  ||||| |||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttag 8425745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 18451377 - 18451216
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||| ||||| |||||||||||    
T  18451377 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttg 18451278  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  18451277 ttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 18451216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 28616613 - 28616726
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  247 tgcatttttcgtcc 260  Q
    |||| |||||||||    
T  28616713 tgcaattttcgtcc 28616726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 20444747 - 20444862
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  20444747 aaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcattttt 20444846  T
Q  245 gttgcatttttcgtcc 260  Q
    |||||| |||||||||    
T  20444847 gttgcagttttcgtcc 20444862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 153 - 307
Target Start/End: Original strand, 3025472 - 3025625
Alignment:
Q  153 attacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 252  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  253 tttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||| || || ||||| |  ||| | ||||||| |||||||||||||||||    
T  3025572 tttcgtcctacccccatttt-attctcaaaaaacgcaaagaaatgacagttttag 3025625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 43058333 - 43058493
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||||||||| || | ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| | || ||   ||| |  ||||| ||||| |||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttag 43058493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 28847241 - 28847127
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  28847241 aggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttg 28847142  T
Q  246 ttgcatttttcgtcc 260  Q
    |||||||||||||||    
T  28847141 ttgcatttttcgtcc 28847127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 14432145 - 14432302
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||| |||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 14432302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 35781207 - 35781095
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    ||||||||||||||||| || | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  || |||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  248 gcatttttcgtcc 260  Q
    |||||||||||||    
T  35781107 gcatttttcgtcc 35781095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 15552596 - 15552486
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||||||||||||||||  ||||||||||||||||||||| || ||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  249 catttttcgtcc 260  Q
     |||||||||||    
T  15552497 tatttttcgtcc 15552486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 8972239 - 8972348
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | |||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  249 catttttcgt 258  Q
    ||||||||||    
T  8972339 catttttcgt 8972348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 35779708 - 35779821
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | |||||||| | ||||||||||| |||||||||| ||||||||||||||||||  ||| ||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  247 tgcatttttcgtcc 260  Q
    ||||||||| ||||    
T  35779808 tgcattttttgtcc 35779821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 15551501 - 15551615
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | |||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  ||| |||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  249 catttttcgtccaac 263  Q
    |||||||||||||||    
T  15551601 catttttcgtccaac 15551615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 28143576 - 28143416
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||| ||||||||||| | |  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||||||  |||  | || |||||| |||     
T  28143576 aggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt- 28143478  T
Q  246 ttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||| |||| |||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  28143477 ttgcagttttagtcctacgtcctattttcaa-ctccagaaacgcagagaaatgacagttttag 28143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 30706075 - 30706120
Alignment:
Q  64 taagagaaattctaatatggttacattatcaaataaaaagtgtttg 109  Q
    ||||||||||| ||||||||| |||| |||||||||||||||||||    
T  30706075 taagagaaattttaatatggtcacatgatcaaataaaaagtgtttg 30706120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 305
Target Start/End: Complemental strand, 31797325 - 31797166
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| |    ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| |||  | || ||| || |||    
T  31797325 aaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgttt 31797227  T
Q  245 gttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagtttt 305  Q
     ||||| |||| |||| || |||||||||||| ||| |||||||||||||||||||||||||    
T  31797226 tttgcagttttagtcctacctcctattttcaa-ctctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 4355755 - 4355806
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtc 198  Q
    ||||||||||||||||||||| |||  ||||| ||||||||||||| |||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtc 4355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 62956 - 63117
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||| ||||| ||   ||||| || |||||||||| ||||||| || ||||||||  ||||||||  ||| || || ||| || |||     
T  62956 aggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactat-atgtttt 63054  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||| |||| |||| | ||||   |||| ||||| ||||||||| | |||||||||||||||    
T  63055 ttgcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttag 63117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 15550793 - 15550834
Alignment:
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  15550793 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 15550834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 25336147 - 25336093
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||||||||||||||||||||| |||  ||||| || |||||||||| |||||||    
T  25336147 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 25336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 33920731 - 33920772
Alignment:
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  33920731 cctattttcaa-ctccagaaacgcatagaaatgacagttttag 33920772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 38007949 - 38008003
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||||||||||||||||||||| |||  ||||| || |||||||||| |||||||    
T  38007949 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 38008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 43216256 - 43216202
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||||||||||||||||| ||| ||| |||||| || |||||||||| |||||||    
T  43216256 aggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcct 43216202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 44219643 - 44219804
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| ||   |||||  | |||||| ||| || |||| || |||| |||  ||||||||  ||| || |||||| || |||     
T  44219643 aggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattat-atgtttt 44219741  T
Q  246 ttgcatttttcgtccaa-ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||| |||| |||| | ||||   |||| ||||||||||||||| |||||||||||||||||    
T  44219742 ttgcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttag 44219804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 4356179 - 4356142
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  4356179 tttccaactccagaaacgcacagaaatgacagttttag 4356142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 4809002 - 4809039
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  4809002 tttccaactccagaaacgcacagaaatgacagttttag 4809039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 5560973 - 5560936
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  5560973 tttccaactccagaaacgcacagaaatgacagttttag 5560936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 6949990 - 6949937
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    ||||||||||||||||||||| |||  ||||| || |||||||||| |||||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 6949937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 11540061 - 11540024
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  11540061 tttccaactccagaaacgcacagaaatgacagttttag 11540024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 13399545 - 13399582
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  13399545 tttccaactccagaaacgcacagaaatgacagttttag 13399582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 42192665 - 42192628
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  42192665 tttccaactccagaaacgcacagaaatgacagttttag 42192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 32418156 - 32418212
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||||||||||||||||| ||||| |||  ||||| || |||||||||| |||||||    
T  32418156 taaggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcct 32418212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 43160433 - 43160397
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagtttta 306  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  43160433 tttccaactccagaaacgcacagaaatgacagtttta 43160397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 3e-79; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 144 - 332
Target Start/End: Complemental strand, 18984667 - 18984478
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18984667 taaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18984568  T
Q  244 tgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||||| | ||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  18984567 tgttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttaggcggttttagaccttcccctatgct 18984478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 149 - 332
Target Start/End: Original strand, 21856044 - 21856228
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 21856143  T
Q  249 catttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856144 catttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 21856228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 50970277 - 50970464
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  50970277 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttg 50970376  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50970377 ttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacccctatgct 50970464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 149 - 332
Target Start/End: Complemental strand, 17433758 - 17433574
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  249 catttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacccctatgct 17433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 39154567 - 39154379
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 39154468  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39154467 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 39154379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 33143913 - 33144103
Alignment:
Q  145 aaggcttaatta--cacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 242  Q
    ||||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33143913 aaggcttaattatacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 33144012  T
Q  243 ttgttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    || |||||| |||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33144013 tttttgcatatttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 33144103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 147 - 332
Target Start/End: Complemental strand, 29870164 - 29869978
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 148 - 332
Target Start/End: Complemental strand, 4636515 - 4636330
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  248 gcatttttcgt-ccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacccctatgct 4636330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 148 - 332
Target Start/End: Original strand, 5539817 - 5540002
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    |||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  248 gcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    | ||||||||||| | ||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacccctatgct 5540002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 148 - 332
Target Start/End: Original strand, 8678542 - 8678727
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  248 gcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||| | || ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttaggcggttttagacatacccctatgct 8678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 15173639 - 15173453
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  15173639 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttg 15173541  T
Q  246 ttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||| || |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15173540 ttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 146 - 333
Target Start/End: Original strand, 15646191 - 15646379
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  |||||||||||||||||    
T  15646191 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttg 15646290  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgcta 333  Q
    ||||||||||||||| | ||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15646291 ttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacccctatgcta 15646379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 26859059 - 26859232
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagac 319  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||| | | ||||||||||||||||||||    
T  26859159 tgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttaggcggttttagac 26859232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 29307487 - 29307326
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 29307326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 9019509 - 9019347
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  9019509 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttg 9019410  T
Q  246 ttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||    
T  9019409 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttag 9019347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 148 - 330
Target Start/End: Original strand, 5962579 - 5962762
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    ||||||||||| |||||||| | ||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  248 gcatttttcg-tccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 330  Q
    |||||||||| || | |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttaggcggttttaaacttacccctatg 5962762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 15646743 - 15646580
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||    
T  15646743 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 15646644  T
Q  244 tgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||||| || || | ||| |  ||||| |||||||||||||||||||||||||    
T  15646643 tgttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttag 15646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 50970825 - 50970663
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50970825 aaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 50970726  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  50970725 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 50970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 5540365 - 5540203
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  5540365 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcattttt 5540266  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  5540265 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 5540203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 307
Target Start/End: Original strand, 18984118 - 18984279
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18984118 aggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984217  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| |||||||||||||||| ||||||||    
T  18984218 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttag 18984279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 142 - 307
Target Start/End: Original strand, 29869615 - 29869780
Alignment:
Q  142 aataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 241  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||    
T  29869615 aataaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatt 29869714  T
Q  242 tttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  29869715 tttgttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttag 29869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 8679086 - 8678927
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| ||  | ||||| |  ||||| ||| |||||||||||||||||||||    
T  8678986 tgcatttttcgtcctacctccatttt-attctccaaaaatgcagagaaatgacagttttag 8678927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 29306953 - 29307113
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    |||||||||||||||||| || | |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 29307113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 33144462 - 33144304
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| ||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  249 catttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 33144304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 21856588 - 21856428
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| |||||   ||| |  ||||| |||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttag 21856428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 5963126 - 5962963
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||| |||||||||||||||    
T  5963126 taaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttt 5963027  T
Q  244 tgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  5963026 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 5962963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 9018972 - 9019086
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  9018972 aggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttg 9019071  T
Q  246 ttgcatttttcgtcc 260  Q
    |||||||||||||||    
T  9019072 ttgcatttttcgtcc 9019086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 147 - 332
Target Start/End: Original strand, 17112282 - 17112467
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||  |  |||||||  ||||||| |||| ||||   |||||||||||| |||| ||||  ||| |||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  247 tgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||| || |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttaggcggttttagacctacccctatgct 17112467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 15173099 - 15173256
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 15173256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 39154021 - 39154179
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||| || |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  249 catttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| || ||   ||  |  ||||| ||||||| |||||||||||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttag 39154179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 17433216 - 17433376
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| |  |||||||||||||||| |||||||  | |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  247 tgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||| ||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  17433316 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 17433376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 52268287 - 52268403
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||||||||||| | || ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  52268287 taaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttt 52268386  T
Q  244 tgttgcatttttcgtcc 260  Q
    ||||||| |||||||||    
T  52268387 tgttgcacttttcgtcc 52268403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 26859605 - 26859491
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||||||||||| || | ||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  26859605 aggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttg 26859506  T
Q  246 ttgcatttttcgtcc 260  Q
    |||||||||||||||    
T  26859505 ttgcatttttcgtcc 26859491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 2733503 - 2733416
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaa 233  Q
    ||||||||||| |||||||||| ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||||    
T  2733503 aggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 52269291 - 52269180
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | |||||||| | |||||| ||||  ||| ||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  249 catttttcgtcc 260  Q
    || |||||||||    
T  52269191 cacttttcgtcc 52269180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 47827108 - 47827033
Alignment:
Q  172 tgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  47827108 tgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 222  Q
    ||||||||||||||||||| | ||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 44802718 - 44802557
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| |||  ||||| ||  ||||||||| ||||| ||||  ||| |||| ||||||||  |||  | || |||||| |||     
T  44802718 aggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgtttt 44802619  T
Q  246 ttgcatttttcg-tccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||| |||| | || | ||||||||||| |||||||||||| |||| |||||||| ||||||    
T  44802618 ttgcagttttagttctacctcctattttc-aactccagaaacacagaaaaatgacaattttag 44802557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 4636033 - 4636132
Alignment:
Q  207 ttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagtttta 306  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||| || | || ||   ||| |  || || ||||||||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 50419806 - 50419726
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 227  Q
    ||||||||| ||||||||||||| |  ||| | || |||||||||| |||||||||| ||||||||  |||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtc 50419726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 17088569 - 17088526
Alignment:
Q  263 ctcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  17088569 ctcctattttcaaa-tctagaaacgcagagaaatgacagttttag 17088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 7101275 - 7101318
Alignment:
Q  66 agagaaattctaatatggttacattatcaaataaaaagtgtttg 109  Q
    ||||||||||||| |||||||| | |||||||||||||||||||    
T  7101275 agagaaattctaacatggttacgtgatcaaataaaaagtgtttg 7101318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 29438928 - 29438983
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    ||||||||||||||||||||||| |||  ||||| || |||||||||| |||||||    
T  29438928 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 29438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 8229763 - 8229800
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  8229763 tttctaactccagaaacgcacagaaatgacagttttag 8229800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 8230064 - 8230027
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  8230064 tttccaactccagaaacgcacagaaatgacagttttag 8230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 17641787 - 17641750
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  17641787 tttccaactccagaaacgcacagaaatgacagttttag 17641750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 23340183 - 23340236
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcct 200  Q
    |||||||||||||||||| ||||||  ||||| || |||||||||| |||||||    
T  23340183 ggcttaattacacttttgatcattgcattttgaccaactcacgaaattggtcct 23340236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 34555803 - 34555766
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  34555803 tttccaactccagaaacgcacagaaatgacagttttag 34555766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 44954349 - 44954386
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  44954349 tttccaactccagaaacgcacagaaatgacagttttag 44954386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 44954649 - 44954612
Alignment:
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  44954649 tttccaactccagaaacgcacagaaatgacagttttag 44954612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 16253211 - 16253155
Alignment:
Q  66 agagaaattctaatatggttacattatcaaataaaaagtgtttgaccatacacacat 122  Q
    ||||||||||||||||| | |||| |||||| ||||||||||||  || ||||||||    
T  16253211 agagaaattctaatatgatcacatgatcaaagaaaaagtgtttggtcacacacacat 16253155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 45048594 - 45048504
Alignment:
Q  235 tatcatttttgttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccc 326  Q
    |||||| ||| ||||| |||| |||| || |||||||||||| ||||||||||||||||||||  | | |||| || ||||||||||||||||    
T  45048594 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaaatagccg-tttatgcagttttagacctacccc 45048504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 136; Significance: 7e-71; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 147 - 325
Target Start/End: Complemental strand, 11168 - 10989
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 325  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctaccc 10989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 171 - 307
Target Start/End: Original strand, 10645 - 10781
Alignment:
Q  171 gtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtccaactc-ctat 269  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| || | | ||    
T  10645 gtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctccat 10744  T
Q  270 tttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||| |  ||||| ||| |||||||||||||||||||||    
T  10745 ttt-attctccaaaaatgcagagaaatgacagttttag 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 145 - 332
Target Start/End: Complemental strand, 64852 - 64664
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    |||| |||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  64852 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcattttt 64753  T
Q  245 gttgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    |||||||||||||||| | || |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| |||||||    
T  64752 gttgcatttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttaggcggttttagacctacctctatgct 64664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 64299 - 64462
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||||||||||||||||||||||| | |||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  64299 taaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttt 64398  T
Q  244 tgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||||  || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  64399 tgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttag 64462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 205916 - 205754
Alignment:
Q  144 taaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 243  Q
    |||| ||||||||||||||| ||| |    ||||| || |||||||||| ||||||||||  ||| |||  ||||||||| |||  | || |||||| ||    
T  205916 taagtcttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgtt 205817  T
Q  244 tgttgcatttttcgtccaac-tcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    | ||||| |||| |||| || |||||||||||| ||||| ||||||||||||||| |||||||||    
T  205816 t-ttgcagttttagtcctacgtcctattttcaa-ctccaaaaacgcagagaaatggcagttttag 205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 149 - 326
Target Start/End: Complemental strand, 5334 - 5160
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  249 catttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccc 326  Q
    |||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  5234 catttttcgtc---ctcctattttcaaactccagaaacgcagaaaaatgacagttttaggcggttttagacttacccc 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 141 - 307
Target Start/End: Original strand, 4787 - 4953
Alignment:
Q  141 taataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 240  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  4787 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 4886  T
Q  241 ttttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||||||||||| || ||   ||| |  ||||| |||||||||||||| ||||||||||    
T  4887 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttag 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 114; Significance: 9e-58; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 1286 - 1125
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 246  Q
    ||||||||||||||||| ||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  247 tgcatttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||| |||||||| | ||||||||||||||| ||||||||||||| ||||| |||||||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttag 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 755 - 912
Alignment:
Q  149 cttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 248  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  249 catttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| || ||   ||| |  ||||| |||||||||||||| ||||||||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttag 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 4242 - 4389
Alignment:
Q  186 cacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcg-tccaactcctattttcaaactccagaa 284  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| || | ||||||||||||||||| | ||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  285 acgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttaggcggttttagacctacccctatgct 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 4753 - 4592
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  4753 aggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttg 4654  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| |||| ||||||||||||||||||||    
T  4653 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttag 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 171 - 332
Target Start/End: Complemental strand, 17017 - 16855
Alignment:
Q  171 gtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtccaac-tcctat 269  Q
    |||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||| || ||||||    
T  17017 gtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctat 16918  T
Q  270 tttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  16917 tttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 16564 - 16656
Alignment:
Q  215 gaacaaaacggtcattcaattatcatttttgttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||  || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttag 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 143 - 307
Target Start/End: Original strand, 42165 - 42330
Alignment:
Q  143 ataaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 242  Q
    |||||| |||||||||||||| ||  | ||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  42165 ataaggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcattt 42264  T
Q  243 ttgttgcatttttcgtc-caactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||| |||  | |||||||||||||||| ||||||||||||||||||||||||||||    
T  42265 ttgttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttag 42330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 42704 - 42544
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    ||||||||||| |||||||| | | ||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  42704 aggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 42605  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    || |||||||||||| || || ||||| |  ||||| |||||||||||||||||||||||||    
T  42604 tttcatttttcgtcctacccccatttt-attctccaaaaacgcagagaaatgacagttttag 42544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 145 - 260
Target Start/End: Complemental strand, 28790 - 28675
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28790 aaggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcattttt 28691  T
Q  245 gttgcatttttcgtcc 260  Q
    |||||| |||||||||    
T  28690 gttgcagttttcgtcc 28675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 18833 - 18994
Alignment:
Q  145 aaggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  18833 aaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcattttt 18932  T
Q  245 gttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    |||||||||||| ||| || || ||||| |  ||||| |||||||||||||| ||||||||||    
T  18933 gttgcatttttcatcctacccccatttt-attctccaaaaacgcagagaaataacagttttag 18994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  147 ggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 244  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 307
Target Start/End: Complemental strand, 134219 - 134058
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 245  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| || |||||||| ||||||||    
T  134219 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttg 134120  T
Q  246 ttgcatttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||||||| || ||   ||| |  ||||| |||||||||||||||||||||||||    
T  134119 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 134058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 150 - 306
Target Start/End: Complemental strand, 10414 - 10259
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  250 atttttcgtccaactcctattttcaaactccagaaacgcagagaaatgacagtttta 306  Q
    ||||||||||| || || ||||| |  ||||| |||  |||||||||||||||||||    
T  10314 atttttcgtcctacccccatttt-attctccaaaaattcagagaaatgacagtttta 10259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 150 - 332
Target Start/End: Original strand, 9935 - 10116
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||| |||||||| | ||||||| ||||| ||||||||||| || ||||||||||| | ||||||||| |||| ||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  250 atttttcgtcc-aactcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 332  Q
    | ||||| ||| | ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||| || ||||||||||||    
T  10035 a-ttttcatcctacctcctattttcaaactcaagaaacg-agagaaatgacaattttaggcggttttaaacatacccctatgct 10116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 568 - 679
Alignment:
Q  148 gcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 247  Q
    ||||||||||||||||| || | |||||||||||||||||||||| || || |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  248 gcatttttcgtc 259  Q
    | ||||||||||    
T  668 gtatttttcgtc 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    |||||||||||||||||| |  |||||||| ||||| |||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  250 a 250  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 62000 - 61890
Alignment:
Q  150 ttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 249  Q
    ||||||||||||||| || | ||||||||| |||||||||||| ||||||| ||||||||||| |||||||||   |||||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  250 atttttcgtcc 260  Q
    |||||||||||    
T  61900 atttttcgtcc 61890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 61027 - 61102
Alignment:
Q  146 aggcttaattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 221  Q
    |||||||| |||||||||| || | |||||||||||||||||||||| || ||||||| |||||||| ||||||||    
T  61027 aggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 260
Target Start/End: Original strand, 454 - 562
Alignment:
Q  151 taattacacttttggtcattgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 250  Q
    |||||||| |||||||| | |||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  ||| ||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  251 tttttcgtcc 260  Q
    ||||||||||    
T  553 tttttcgtcc 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 7784 - 7720
Alignment:
Q  196 gtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcc 260  Q
    ||||| |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcc 7720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 6818 - 6777
Alignment:
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  6818 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 6777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 6836 - 6795
Alignment:
Q  265 cctattttcaaactccagaaacgcagagaaatgacagttttag 307  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  6836 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 6795  T

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