View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1288_low_55 (Length: 251)

Name: NF1288_low_55
Description: NF1288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1288_low_55
NF1288_low_55
[»] chr1 (23 HSPs)
chr1 (3-247)||(41394366-41394610)
chr1 (54-251)||(20913170-20913367)
chr1 (54-251)||(20931485-20931682)
chr1 (54-226)||(37844374-37844548)
chr1 (54-246)||(20445824-20446019)
chr1 (54-247)||(20893551-20893745)
chr1 (54-246)||(20531589-20531783)
chr1 (140-251)||(5072388-5072499)
chr1 (140-251)||(18601118-18601229)
chr1 (9-86)||(21860334-21860411)
chr1 (12-86)||(44034829-44034903)
chr1 (53-247)||(45051567-45051759)
chr1 (140-247)||(2116399-2116506)
chr1 (128-251)||(51452632-51452755)
chr1 (55-251)||(22227949-22228146)
chr1 (55-251)||(22232646-22232843)
chr1 (9-86)||(41218728-41218805)
chr1 (13-120)||(27675086-27675191)
chr1 (13-70)||(13376711-13376768)
chr1 (13-70)||(20177513-20177570)
chr1 (55-86)||(15861327-15861358)
chr1 (145-185)||(16646118-16646158)
chr1 (54-86)||(51452809-51452841)
[»] chr3 (56 HSPs)
chr3 (3-251)||(16743990-16744238)
chr3 (54-247)||(13839038-13839232)
chr3 (54-251)||(14842487-14842684)
chr3 (54-247)||(12030073-12030266)
chr3 (54-244)||(2049957-2050147)
chr3 (9-191)||(19231981-19232166)
chr3 (54-174)||(19260749-19260869)
chr3 (118-247)||(51158008-51158137)
chr3 (91-247)||(15858986-15859143)
chr3 (140-251)||(55316360-55316471)
chr3 (140-251)||(41270216-41270327)
chr3 (128-251)||(17912483-17912605)
chr3 (9-89)||(15857118-15857198)
chr3 (9-86)||(3992873-3992950)
chr3 (9-86)||(55513193-55513270)
chr3 (135-247)||(15936634-15936746)
chr3 (9-86)||(2844514-2844591)
chr3 (128-251)||(2449238-2449361)
chr3 (9-86)||(54037979-54038056)
chr3 (53-247)||(15614978-15615170)
chr3 (9-86)||(17955835-17955916)
chr3 (128-251)||(13975722-13975844)
chr3 (128-251)||(45860946-45861068)
chr3 (9-86)||(7854305-7854382)
chr3 (135-247)||(15938476-15938588)
chr3 (128-251)||(13954890-13955012)
chr3 (165-251)||(16821280-16821366)
chr3 (25-86)||(45581954-45582016)
chr3 (13-70)||(17205019-17205076)
chr3 (13-86)||(38810868-38810941)
chr3 (13-68)||(12031849-12031904)
chr3 (13-86)||(13301323-13301396)
chr3 (13-86)||(13311979-13312052)
chr3 (144-185)||(14080715-14080756)
chr3 (13-70)||(17191879-17191936)
chr3 (54-86)||(2449152-2449184)
chr3 (54-86)||(16261777-16261809)
chr3 (54-86)||(16933869-16933901)
chr3 (54-86)||(17912398-17912430)
chr3 (54-86)||(23492696-23492728)
chr3 (54-86)||(38168237-38168269)
chr3 (54-86)||(53771365-53771397)
chr3 (13-70)||(3576290-3576347)
chr3 (135-224)||(11986173-11986262)
chr3 (20-85)||(15550922-15550987)
chr3 (144-228)||(4145814-4145898)
chr3 (54-86)||(11986080-11986112)
chr3 (54-86)||(13954804-13954836)
chr3 (145-185)||(14059214-14059254)
chr3 (54-86)||(14285289-14285321)
chr3 (54-86)||(19947026-19947058)
chr3 (54-86)||(30153265-30153297)
chr3 (145-185)||(30207422-30207462)
chr3 (54-86)||(33342204-33342236)
chr3 (54-86)||(45861122-45861154)
chr3 (54-86)||(51961031-51961063)
[»] chr2 (37 HSPs)
chr2 (9-244)||(20627193-20627429)
chr2 (54-247)||(462882-463075)
chr2 (9-247)||(43642836-43643076)
chr2 (9-247)||(19794584-19794823)
chr2 (54-247)||(36982364-36982560)
chr2 (54-247)||(8891386-8891581)
chr2 (140-251)||(19886661-19886772)
chr2 (54-240)||(24341309-24341501)
chr2 (54-150)||(22863169-22863267)
chr2 (128-240)||(25265390-25265502)
chr2 (9-86)||(22275045-22275122)
chr2 (9-86)||(22284278-22284355)
chr2 (128-251)||(19689401-19689524)
chr2 (128-251)||(23820211-23820334)
chr2 (9-85)||(15633538-15633614)
chr2 (128-251)||(14906440-14906563)
chr2 (128-251)||(17396653-17396775)
chr2 (128-251)||(20015151-20015274)
chr2 (178-251)||(7507894-7507967)
chr2 (13-70)||(43646232-43646289)
chr2 (53-86)||(19689314-19689347)
chr2 (54-86)||(9652796-9652828)
chr2 (54-86)||(14906354-14906386)
chr2 (13-65)||(19660221-19660273)
chr2 (54-86)||(23820388-23820420)
chr2 (55-86)||(25213372-25213403)
chr2 (145-226)||(68156-68238)
chr2 (13-86)||(19666848-19666921)
chr2 (13-70)||(25305769-25305826)
chr2 (13-120)||(31146032-31146138)
chr2 (54-86)||(7507757-7507789)
chr2 (54-86)||(17396567-17396599)
chr2 (54-86)||(20015328-20015360)
chr2 (145-185)||(22775206-22775246)
chr2 (145-185)||(22780584-22780624)
chr2 (54-86)||(28031134-28031166)
chr2 (54-86)||(33128372-33128404)
[»] chr7 (45 HSPs)
chr7 (13-244)||(3060113-3060344)
chr7 (54-247)||(16211910-16212103)
chr7 (54-247)||(13036938-13037133)
chr7 (54-247)||(11580661-11580858)
chr7 (54-247)||(36052808-36053003)
chr7 (140-251)||(10989550-10989661)
chr7 (139-251)||(2437598-2437710)
chr7 (128-247)||(47481031-47481150)
chr7 (140-251)||(13911024-13911135)
chr7 (9-86)||(32493901-32493978)
chr7 (135-247)||(18253842-18253954)
chr7 (128-251)||(11516367-11516490)
chr7 (129-224)||(13321183-13321278)
chr7 (128-251)||(15441564-15441687)
chr7 (128-251)||(30262129-30262252)
chr7 (128-251)||(7293156-7293279)
chr7 (165-247)||(16478987-16479069)
chr7 (9-86)||(126738-126815)
chr7 (128-251)||(25292338-25292461)
chr7 (9-86)||(1936872-1936949)
chr7 (144-251)||(13572817-13572924)
chr7 (9-86)||(111124-111201)
chr7 (9-85)||(7283911-7283987)
chr7 (13-120)||(13377819-13377924)
chr7 (56-249)||(295893-296087)
chr7 (13-70)||(13389693-13389750)
chr7 (54-160)||(36024372-36024485)
chr7 (54-86)||(2029244-2029276)
chr7 (54-86)||(7293333-7293365)
chr7 (54-86)||(11516544-11516576)
chr7 (54-86)||(14113903-14113935)
chr7 (54-86)||(15441478-15441510)
chr7 (54-123)||(15709428-15709501)
chr7 (13-69)||(16919870-16919926)
chr7 (54-86)||(30262043-30262075)
chr7 (54-86)||(42056188-42056220)
chr7 (145-226)||(13377693-13377775)
chr7 (54-86)||(371417-371449)
chr7 (54-86)||(3049905-3049937)
chr7 (54-86)||(13321334-13321366)
chr7 (128-160)||(14113989-14114021)
chr7 (128-160)||(14423639-14423671)
chr7 (58-86)||(15516765-15516793)
chr7 (54-86)||(25124450-25124482)
chr7 (54-86)||(47480944-47480976)
[»] scaffold0023 (3 HSPs)
scaffold0023 (54-247)||(48742-48935)
scaffold0023 (165-251)||(36234-36320)
scaffold0023 (54-86)||(61122-61154)
[»] chr8 (34 HSPs)
chr8 (9-247)||(16404855-16405094)
chr8 (54-247)||(16193643-16193835)
chr8 (54-247)||(24928716-24928910)
chr8 (54-247)||(43373392-43373587)
chr8 (140-251)||(30120863-30120974)
chr8 (140-251)||(16674392-16674503)
chr8 (9-86)||(274766-274843)
chr8 (9-86)||(641006-641083)
chr8 (9-86)||(826812-826889)
chr8 (9-86)||(24716717-24716794)
chr8 (128-251)||(5238227-5238350)
chr8 (140-247)||(6774258-6774365)
chr8 (128-251)||(22907214-22907337)
chr8 (140-247)||(24549126-24549233)
chr8 (128-251)||(24661248-24661371)
chr8 (128-251)||(43685686-43685809)
chr8 (128-251)||(17345709-17345832)
chr8 (144-251)||(21844576-21844683)
chr8 (144-251)||(21851969-21852076)
chr8 (202-251)||(222753-222802)
chr8 (202-251)||(691908-691957)
chr8 (202-251)||(736376-736425)
chr8 (202-251)||(860271-860320)
chr8 (9-86)||(39115598-39115675)
chr8 (13-70)||(17285543-17285600)
chr8 (13-70)||(21198005-21198062)
chr8 (54-86)||(5238404-5238436)
chr8 (54-86)||(22907128-22907160)
chr8 (54-86)||(24385652-24385684)
chr8 (54-86)||(24661162-24661194)
chr8 (54-86)||(43685863-43685895)
chr8 (54-86)||(2545265-2545297)
chr8 (54-86)||(3431176-3431208)
chr8 (54-86)||(22886654-22886686)
[»] chr4 (28 HSPs)
chr4 (9-247)||(54118123-54118363)
chr4 (54-247)||(122033-122226)
chr4 (54-247)||(13246574-13246769)
chr4 (54-240)||(15675009-15675201)
chr4 (54-240)||(10104170-10104362)
chr4 (140-251)||(47357795-47357906)
chr4 (54-191)||(33240900-33241043)
chr4 (128-251)||(26680340-26680463)
chr4 (9-86)||(25119062-25119139)
chr4 (128-251)||(10488702-10488825)
chr4 (144-251)||(10644360-10644467)
chr4 (128-251)||(16327926-16328049)
chr4 (128-251)||(13048221-13048344)
chr4 (9-86)||(5682383-5682460)
chr4 (54-160)||(31132545-31132657)
chr4 (155-225)||(31115795-31115865)
chr4 (144-226)||(40885570-40885652)
chr4 (13-86)||(41165808-41165881)
chr4 (13-70)||(47534933-47534990)
chr4 (54-86)||(14952085-14952117)
chr4 (54-86)||(15135907-15135939)
chr4 (54-86)||(15272211-15272243)
chr4 (54-86)||(16327840-16327872)
chr4 (54-86)||(16609013-16609045)
chr4 (54-86)||(26680517-26680549)
chr4 (145-226)||(15044992-15045074)
chr4 (54-86)||(8045272-8045304)
chr4 (54-86)||(16523146-16523178)
[»] scaffold0266 (2 HSPs)
scaffold0266 (54-247)||(3508-3701)
scaffold0266 (54-247)||(1268-1462)
[»] scaffold0106 (1 HSPs)
scaffold0106 (54-244)||(41876-42066)
[»] scaffold0018 (1 HSPs)
scaffold0018 (56-247)||(51110-51301)
[»] scaffold0413 (1 HSPs)
scaffold0413 (54-247)||(5990-6183)
[»] scaffold0175 (1 HSPs)
scaffold0175 (54-247)||(882-1075)
[»] scaffold0001 (2 HSPs)
scaffold0001 (54-247)||(172049-172242)
scaffold0001 (54-247)||(177752-177945)
[»] chr5 (34 HSPs)
chr5 (54-247)||(23507109-23507302)
chr5 (54-247)||(27182471-27182666)
chr5 (54-240)||(18530988-18531179)
chr5 (54-240)||(22053753-22053945)
chr5 (140-251)||(19500040-19500151)
chr5 (140-251)||(22366481-22366592)
chr5 (140-251)||(25426769-25426880)
chr5 (143-251)||(18777995-18778103)
chr5 (140-251)||(12515-12626)
chr5 (140-251)||(21073595-21073706)
chr5 (143-251)||(43443398-43443506)
chr5 (140-251)||(4199985-4200096)
chr5 (128-251)||(20623109-20623232)
chr5 (128-251)||(21233528-21233651)
chr5 (140-247)||(29188284-29188391)
chr5 (128-251)||(34939417-34939540)
chr5 (130-251)||(25900408-25900529)
chr5 (128-224)||(37052911-37053007)
chr5 (128-251)||(16536337-16536460)
chr5 (144-251)||(27009982-27010089)
chr5 (9-85)||(11584374-11584450)
chr5 (13-86)||(5450695-5450768)
chr5 (13-70)||(21222462-21222519)
chr5 (54-86)||(16105967-16105999)
chr5 (54-86)||(20623286-20623318)
chr5 (54-86)||(21233442-21233474)
chr5 (54-86)||(25900320-25900352)
chr5 (54-86)||(37053061-37053093)
chr5 (144-228)||(29918127-29918212)
chr5 (135-224)||(32950862-32950951)
chr5 (54-86)||(108728-108760)
chr5 (54-86)||(9730278-9730310)
chr5 (54-86)||(16536514-16536546)
chr5 (145-185)||(16595713-16595753)
[»] chr6 (31 HSPs)
chr6 (54-247)||(23153591-23153786)
chr6 (55-251)||(14626045-14626241)
chr6 (140-251)||(25175704-25175815)
chr6 (140-251)||(27653983-27654094)
chr6 (140-251)||(16825752-16825865)
chr6 (9-86)||(19983147-19983224)
chr6 (54-123)||(23148266-23148335)
chr6 (9-86)||(35015012-35015089)
chr6 (128-240)||(35009439-35009551)
chr6 (128-251)||(1657748-1657871)
chr6 (53-247)||(1650020-1650212)
chr6 (128-251)||(15862611-15862734)
chr6 (9-86)||(18583640-18583717)
chr6 (13-70)||(21623506-21623563)
chr6 (128-213)||(27751603-27751688)
chr6 (128-224)||(29666041-29666137)
chr6 (13-70)||(22361619-22361676)
chr6 (13-85)||(14152632-14152704)
chr6 (54-86)||(18002395-18002427)
chr6 (54-86)||(23995247-23995279)
chr6 (54-86)||(26090059-26090091)
chr6 (144-228)||(29605612-29605696)
chr6 (55-86)||(4991396-4991427)
chr6 (54-84)||(15742120-15742150)
chr6 (54-86)||(1657661-1657693)
chr6 (54-86)||(15862789-15862821)
chr6 (145-185)||(18399144-18399184)
chr6 (54-86)||(18823283-18823315)
chr6 (54-86)||(18839138-18839170)
chr6 (54-86)||(27751742-27751774)
chr6 (54-86)||(32276659-32276691)
[»] scaffold0077 (2 HSPs)
scaffold0077 (53-247)||(36836-37032)
scaffold0077 (9-85)||(15322-15398)
[»] scaffold0008 (2 HSPs)
scaffold0008 (54-226)||(128095-128267)
scaffold0008 (165-251)||(31700-31786)
[»] scaffold0195 (2 HSPs)
scaffold0195 (57-247)||(19350-19543)
scaffold0195 (128-247)||(21434-21553)
[»] scaffold0162 (3 HSPs)
scaffold0162 (54-247)||(26340-26534)
scaffold0162 (128-240)||(8180-8292)
scaffold0162 (13-70)||(6877-6934)
[»] scaffold0012 (2 HSPs)
scaffold0012 (54-247)||(247366-247561)
scaffold0012 (54-86)||(34075-34107)
[»] scaffold0498 (1 HSPs)
scaffold0498 (54-247)||(9022-9215)
[»] scaffold0028 (3 HSPs)
scaffold0028 (54-247)||(89378-89573)
scaffold0028 (54-179)||(107708-107835)
scaffold0028 (55-86)||(130880-130911)
[»] scaffold0302 (1 HSPs)
scaffold0302 (54-247)||(12257-12450)
[»] scaffold0009 (1 HSPs)
scaffold0009 (54-247)||(272169-272362)
[»] scaffold0218 (1 HSPs)
scaffold0218 (64-247)||(4996-5180)
[»] scaffold0011 (1 HSPs)
scaffold0011 (54-247)||(123087-123283)
[»] scaffold0025 (3 HSPs)
scaffold0025 (54-154)||(146838-146938)
scaffold0025 (54-240)||(9000-9192)
scaffold0025 (102-247)||(148865-149012)
[»] scaffold1711 (1 HSPs)
scaffold1711 (140-251)||(1304-1415)
[»] scaffold0772 (2 HSPs)
scaffold0772 (135-251)||(5669-5785)
scaffold0772 (54-86)||(5846-5878)
[»] scaffold0132 (3 HSPs)
scaffold0132 (128-240)||(13657-13769)
scaffold0132 (9-86)||(42677-42751)
scaffold0132 (54-86)||(13824-13856)
[»] scaffold0049 (2 HSPs)
scaffold0049 (135-247)||(48331-48443)
scaffold0049 (9-85)||(20493-20569)
[»] scaffold0026 (3 HSPs)
scaffold0026 (135-247)||(107891-108003)
scaffold0026 (144-251)||(64527-64639)
scaffold0026 (143-185)||(89863-89905)
[»] scaffold1542 (1 HSPs)
scaffold1542 (128-247)||(534-653)
[»] scaffold0034 (1 HSPs)
scaffold0034 (9-86)||(80187-80264)
[»] scaffold0125 (2 HSPs)
scaffold0125 (128-240)||(41799-41911)
scaffold0125 (54-94)||(41957-41997)
[»] scaffold0075 (1 HSPs)
scaffold0075 (128-226)||(34460-34558)
[»] scaffold0016 (3 HSPs)
scaffold0016 (9-87)||(166119-166197)
scaffold0016 (12-87)||(162036-162111)
scaffold0016 (13-86)||(116410-116483)
[»] scaffold0184 (1 HSPs)
scaffold0184 (9-86)||(31135-31212)
[»] scaffold0078 (3 HSPs)
scaffold0078 (9-86)||(41632-41709)
scaffold0078 (128-251)||(37066-37189)
scaffold0078 (54-86)||(36980-37012)
[»] scaffold0420 (1 HSPs)
scaffold0420 (140-247)||(13325-13432)
[»] scaffold0141 (4 HSPs)
scaffold0141 (128-251)||(26935-27058)
scaffold0141 (135-251)||(22680-22796)
scaffold0141 (54-86)||(22857-22889)
scaffold0141 (54-86)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (128-251)||(1582-1705)
scaffold0124 (54-86)||(1496-1528)
[»] scaffold0686 (2 HSPs)
scaffold0686 (12-86)||(5735-5809)
scaffold0686 (12-86)||(5941-6015)
[»] scaffold0215 (2 HSPs)
scaffold0215 (165-247)||(9374-9456)
scaffold0215 (165-247)||(16272-16354)
[»] scaffold0342 (1 HSPs)
scaffold0342 (9-87)||(307-385)
[»] scaffold0116 (2 HSPs)
scaffold0116 (144-250)||(177-283)
scaffold0116 (9-86)||(30417-30494)
[»] scaffold0076 (1 HSPs)
scaffold0076 (165-251)||(43138-43224)
[»] scaffold0139 (2 HSPs)
scaffold0139 (139-251)||(21115-21227)
scaffold0139 (165-251)||(14086-14172)
[»] scaffold0529 (1 HSPs)
scaffold0529 (139-240)||(3114-3215)
[»] scaffold0022 (1 HSPs)
scaffold0022 (178-251)||(5254-5327)
[»] scaffold1164 (1 HSPs)
scaffold1164 (9-85)||(1701-1777)
[»] scaffold0122 (2 HSPs)
scaffold0122 (9-85)||(19805-19881)
scaffold0122 (9-85)||(24109-24185)
[»] scaffold0361 (1 HSPs)
scaffold0361 (128-221)||(3360-3453)
[»] scaffold0876 (1 HSPs)
scaffold0876 (9-85)||(94-170)
[»] scaffold0310 (2 HSPs)
scaffold0310 (9-85)||(6259-6335)
scaffold0310 (48-85)||(4-41)
[»] scaffold0369 (1 HSPs)
scaffold0369 (178-250)||(3863-3936)
[»] scaffold0507 (1 HSPs)
scaffold0507 (13-86)||(1363-1436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (13-70)||(35816-35873)
[»] scaffold1295 (1 HSPs)
scaffold1295 (13-70)||(442-499)
[»] scaffold0084 (1 HSPs)
scaffold0084 (135-224)||(56106-56195)
[»] scaffold0053 (1 HSPs)
scaffold0053 (13-70)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (53-86)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (54-86)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (54-86)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (54-86)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (54-86)||(13285-13317)
[»] scaffold0058 (2 HSPs)
scaffold0058 (54-86)||(57392-57424)
scaffold0058 (144-185)||(70307-70348)
[»] scaffold0032 (2 HSPs)
scaffold0032 (54-86)||(55904-55936)
scaffold0032 (54-86)||(108075-108107)
[»] scaffold0207 (1 HSPs)
scaffold0207 (54-97)||(18015-18058)
[»] scaffold0123 (1 HSPs)
scaffold0123 (144-226)||(8174-8257)
[»] scaffold0243 (1 HSPs)
scaffold0243 (145-226)||(2317-2399)
[»] scaffold1272 (1 HSPs)
scaffold1272 (13-70)||(632-689)
[»] scaffold0483 (1 HSPs)
scaffold0483 (13-70)||(6999-7056)
[»] scaffold0456 (2 HSPs)
scaffold0456 (144-185)||(1546-1587)
scaffold0456 (144-185)||(8691-8732)
[»] scaffold0080 (1 HSPs)
scaffold0080 (13-70)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (13-70)||(31357-31414)
[»] scaffold0589 (1 HSPs)
scaffold0589 (145-185)||(8011-8051)
[»] scaffold0367 (1 HSPs)
scaffold0367 (54-86)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (54-86)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (54-86)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (54-86)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (54-86)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (54-86)||(34308-34340)
[»] scaffold0092 (1 HSPs)
scaffold0092 (145-185)||(3525-3565)
[»] scaffold0066 (1 HSPs)
scaffold0066 (54-86)||(45338-45370)
[»] scaffold0039 (1 HSPs)
scaffold0039 (54-86)||(12418-12450)


Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 3 - 247
Target Start/End: Complemental strand, 41394610 - 41394366
Alignment:
Q  3 tggagtatcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaatt 102  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394610 tggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaatt 41394511  T
Q  103 ttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtata 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| || ||||||     
T  41394510 ttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgatgatatgtttgtatgcataaattgatgataattgtatg 41394411  T
Q  203 attgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |||||| ||||| ||||||||||| ||||| ||||||||||||||    
T  41394410 attgttggtgaagttacatgttcaaatatgtaaaaatgataagtt 41394366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 20913367 - 20913170
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||    
T  20913367 taaggtaagggggttagtctttatcgtaatcatcctcattttgcaaattttcaattgttgtatgaattttgcttacggataattgttgctaaattcgtgc 20913268  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||||||| || || |||||||||||||||||||||||| || |||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  20913267 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcatatatgtaaaaatgataagttatga 20913170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 20931682 - 20931485
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||| |||||||||||||||| |||||||| |||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||    
T  20931682 taaggtaagggggttagcctttatcataatcatcctcattttgcaaattttcaattgttgtatgaagtttgcttatggataattgttgctaaattcgtgc 20931583  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||||||| || || |||||||||||||||||||||||| || |||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  20931582 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcatatatgtaaaaatgataagttatga 20931485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 54 - 226
Target Start/End: Original strand, 37844374 - 37844548
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || |||||| ||||||||||||||| |    
T  37844374 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcat 37844473  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttca 226  Q
    |||||||||||| || |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||    
T  37844474 gctccaactatgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 37844548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 54 - 246
Target Start/End: Complemental strand, 20446019 - 20445824
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgt-aaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 150  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   || |||||| ||||||||||||||||    
T  20446019 taaggtaagggagttagtctttatcataatcatcatcattttgtgaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcg 20445920  T
Q  151 tgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagt 246  Q
    |||||||| | || || |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||  || | | |||||||||||    
T  20445919 tgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaagtaggaacaaatgataagt 20445824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 20893551 - 20893745
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||   || |||||| ||||||||||||||| |    
T  20893551 taaggtaagggggttagtcttcatcataatcatcatcattttgtaa-ttttcaaatgttgtatgaatttttgcataatggataattgttgctaaattctt 20893649  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||| || || |||||||||||||||||||||||| || |||||| ||||||  |||||||||||||||| ||| | | ||||||||||||    
T  20893650 gctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttgttgaaattacatgttcaaataggaacaaatgataagtt 20893745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 246
Target Start/End: Complemental strand, 20531783 - 20531589
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  20531783 taaggtaaggaaattagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 20531684  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagt 246  Q
    ||||||| | || |  |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||  || | | |||||||||||    
T  20531683 gctccaaatgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaagtaggaacaaatgataagt 20531589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 5072388 - 5072499
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  5072388 tgctaaattcgtgctcttgctgtgatgttatgtttatatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 5072487  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  5072488 gataagttatga 5072499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 18601118 - 18601229
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    |||||||||| |||||   || || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  18601118 tgctaaattcatgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 18601217  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  18601218 gataagttatga 18601229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 21860411 - 21860334
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  21860411 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 21860334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 44034829 - 44034903
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  44034829 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 44034903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 247
Target Start/End: Complemental strand, 45051759 - 45051567
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||||||||||||||  | |||||| |  |||||  ||||||||||||  | | || ||| |  |||  ||||| ||||||    
T  45051759 ttaaggtaagggggttagtctttatcataatcatg-tgattttgca--ttttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgt 45051663  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    | ||  ||| || ||||| ||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  45051662 gttcttactgtgatgttacgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 45051567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 2116506 - 2116399
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||| |||||||||   ||| || ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||    
T  2116506 tgctagattcgtgcttttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 2116407  T
Q  240 gataagtt 247  Q
    ||||||||    
T  2116406 gataagtt 2116399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 51452755 - 51452632
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||| ||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  51452755 atggataattgttgctaaattcgtgcttcaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 51452656  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  51452655 atatgtgaaaatgaaaagttatga 51452632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 251
Target Start/End: Complemental strand, 22228146 - 22227949
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||  |||||||||||||   || ||| |  ||||||  ||||||||||||  | | || ||| |  ||| |||||||||||||||    
T  22228146 aaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgc 22228047  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||   || || |||||| ||  | |||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  22228046 tcttgctgtgatgttattttcttgtgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatgataagttatga 22227949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 251
Target Start/End: Complemental strand, 22232843 - 22232646
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||  |||||||||||||   || ||| |  ||||||  ||||||||||||  | | || ||| |  ||| |||||||||||||||    
T  22232843 aaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgc 22232744  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||   || || |||||| ||  | |||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  22232743 tcttgctgtgatgttattttcttgtgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatgataagttatga 22232646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 41218805 - 41218728
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| || ||||| |||||    
T  41218805 atcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagttttcatcatgatcat 41218728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 27675191 - 27675086
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgtt 112  Q
    ||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||  |||||||||||| |  |  |  ||||||||||||| ||||    
T  27675191 taggagctaaagtgaagcttgggctaggaattggagataattaaggtaagggggttagaatttatcataatcgt--ttttagtgtaaattttcaattgtt 27675094  T
Q  113 gtatgaat 120  Q
    ||||||||    
T  27675093 gtatgaat 27675086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 13376711 - 13376768
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||| | | ||||| | |||| |||||||||||||||||||||||    
T  13376711 taggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttag 13376768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 20177570 - 20177513
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||| ||||||||    
T  20177570 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaatggggttag 20177513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 86
Target Start/End: Original strand, 15861327 - 15861358
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||    
T  15861327 aaggtaagggggttagtctttatcataatcat 15861358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 16646158 - 16646118
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  16646158 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 16646118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 51452841 - 51452809
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||| |||||||    
T  51452841 taaggtaagggggttagtctttatcttaatcat 51452809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 6e-86; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 3 - 251
Target Start/End: Original strand, 16743990 - 16744238
Alignment:
Q  3 tggagtatcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaatt 102  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  16743990 tggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaacgaggttagtctttaccataatcatcatcattttgtaaatt 16744089  T
Q  103 ttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtata 202  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||||||||| |||||||||||  ||  |||||     
T  16744090 ttcaaatgttgtatgaattttgattatggatgattgttgttaaattcgtgctccaactttgatgatatgtttgtatccatgaattgataataagtgtatg 16744189  T
Q  203 attgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    |||||| || ||||||||| || | ||||| |||||||| |||||||||    
T  16744190 attgttggttaaattacatttttaaatatgtaaaaatgaaaagttatga 16744238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 13839232 - 13839038
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgt-aaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13839232 taaggtaagggggttagtcttcatcataatcatcatcattttgtgaaattttcaaatgttgtatgaattttgattatgaataattgttgctaaattcgtg 13839133  T
Q  153 ctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |||||||| || || |||||||||||||||||||||||| || |||||| |||| | ||||||||||||||||| ||| | | ||||||||||||    
T  13839132 ctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgatggtgaaattacatgttcaaataggaacaaatgataagtt 13839038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 14842487 - 14842684
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  14842487 taaggtaagggggttagtctttatcataatcatcttcactttgcaaattctcaaatgttgtatgaattgtgattatggataattgttgctaaattcgtgc 14842586  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||||||| || || |||||||||||||||||||||| | || |||||| |||||| |||||||| |||||||| || || ||||||||||||||||||    
T  14842587 tccaactgtgatgatatgtttgtatgcatgaattgaagataattgtatgattgttggtgaaattgcatgttcaaatgtgtaaaaatgataagttatga 14842684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 12030073 - 12030266
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  12030073 taaggtaagggggttaatcattatcataatcatcatcattttgtgaaatttcaaatgttgtatgacttttgcttatggataattgttgctaaattcgtgc 12030172  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||||||||||||||| || |||||  |||||| ||||||||||||||||| ||||| |||| |||||||||    
T  12030173 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgtaaaagtgataagtt 12030266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 244
Target Start/End: Complemental strand, 2050147 - 2049957
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  2050147 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatcaattttgcttatggataattgttgctaaattcgtgc 2050048  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataa 244  Q
    ||||||| ||  | ||||||||||||| |||||||||| || |||||  |||||| ||||||||||||||||| ||||| ||| |||||||    
T  2050047 tccaactgtgacgatatgtttgtatgcctgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgtaaacatgataa 2049957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 19232166 - 19231981
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgt-aaattttcaa 107  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  19232166 atcataggagcaaaagtgaagttagagctaatagttggagataattaaggtaagggggttagtctttatcttaatcatcatcattttgtgaaattttcaa 19232067  T
Q  108 atgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 191  Q
    ||||||||||||||||   || |||||| |||||||||||||||||||||||||| || || ||||||| ||| ||||||||||||    
T  19232066 atgttgtatgaatttttgcataatggataattgttgctaaattcgtgctccaactgtgatgatatgtttatattcatgaattgatg 19231981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 19260749 - 19260869
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  19260749 taaggtaagggggttagtctttatcataatcatcatcattttgtaagttttcaaatgttgtatgaattttttttatggataattgttgctaaattcgtgc 19260848  T
Q  154 tccaactatgttgttatgttt 174  Q
    || || |||| || |||||||    
T  19260849 tctaattatgatgatatgttt 19260869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 51158008 - 51158137
Alignment:
Q  118 aattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaatt 217  Q
    ||||||| |||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||| || |||||| |||||| ||||||||    
T  51158008 aattttgcttatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaatt 51158107  T
Q  218 acatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||| ||||| ||||||||||||||    
T  51158108 acatgttcaaatatgtaaaaatgataagtt 51158137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 15858986 - 15859143
Alignment:
Q  91 attttgtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattg 188  Q
    ||||||||||||| ||| |||||||||||||||   || |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  15858986 attttgtaaattt-caattgttgtatgaatttttgcataatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 15859084  T
Q  189 atgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||| || |||||| |||||| ||||||||||||||||| ||||| | ||||||||||||    
T  15859085 atgataattgtatgattgttggtgaaattacatgttcaaatatgaacaaatgataagtt 15859143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 55316471 - 55316360
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  55316471 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 55316372  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  55316371 gataagttatga 55316360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 41270327 - 41270216
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  41270327 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtggaattacatgttcatatatgcaaaaat 41270228  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  41270227 gataagttatga 41270216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 17912483 - 17912605
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||| |     
T  17912483 atggataattgttgctaaattcgtgctccaact-tgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtttaa 17912581  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    ||||| |||||||| |||||||||    
T  17912582 atatgtaaaaatgaaaagttatga 17912605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 15857118 - 15857198
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcat 89  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  15857118 atcataggagctaaagtgaagctagagctaatacttggagataattaaggtaagggggttagtcttcatcataatcatcat 15857198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 3992950 - 3992873
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  3992950 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 3992873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 55513270 - 55513193
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  55513270 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 55513193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 15936634 - 15936746
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgca 234  Q
    |||||| ||||||||||||||||||| |  || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| || || |    
T  15936634 attgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgta 15936733  T
Q  235 aaaatgataagtt 247  Q
    |||||||||||||    
T  15936734 aaaatgataagtt 15936746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 2844591 - 2844514
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  2844591 atcataggagcaaaagtgaagctagagctaatagtttgagataattaaggtaagggggttagtttttatcataatcat 2844514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 2449238 - 2449361
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || ||||||||||||       
T  2449238 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 2449337  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  2449338 atatgtgaaaatgaaaagttatga 2449361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 54037979 - 54038056
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  54037979 atcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcat 54038056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 247
Target Start/End: Complemental strand, 15615170 - 15614978
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||||||||||||||  | |||||| |  |||||  ||||||||||||  | | || ||| |  |||  ||||| ||| ||    
T  15615170 ttaaggtaagggggttagtctttatcataatcatg-taattttgca--ttttctcatgttgtatgaaaatgggttgatgaacaattcatgctagatttgt 15615074  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||  ||| || |||||| |||||||||||||||||||| || |||||  |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  15615073 gctcttactgtggtgttatatttgtatgcatgaattgatgataattgtaggattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 15614978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 17955835 - 17955916
Alignment:
Q  9 atcataggagctaaagtgaagctag----agctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17955835 atcataggagcaaaagtgaagctaggtagagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 17955916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 13975722 - 13975844
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||| |||||||||||||| || |  |||||| |||||| ||| ||||||||||| |     
T  13975722 atggataattgttgctaaattcgtgctccaactttgatgatatgtt-gtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaa 13975820  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    ||| | ||||||||||||||||||    
T  13975821 ataagtaaaaatgataagttatga 13975844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 45861068 - 45860946
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||| |||||||||||||| || |  |||||| |||||| ||| ||||||||||| |     
T  45861068 atggataattgttgctaaattcgtgctccaactttgatgatatgtt-gtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaa 45860970  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    ||| | ||||||||||||||||||    
T  45860969 ataagtaaaaatgataagttatga 45860946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 7854382 - 7854305
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| || |||||||||||    
T  7854382 atcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagttttcatcataatcat 7854305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 15938476 - 15938588
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgca 234  Q
    |||||| |||||| |||||||||||| |  || ||||||||||  |||||||||||| || |||||| |||||| ||||||||||||||||| || || |    
T  15938476 attgttactaaatacgtgctccaactgtaatgatatgtttgtaatcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgta 15938575  T
Q  235 aaaatgataagtt 247  Q
    |||||||||||||    
T  15938576 aaaatgataagtt 15938588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 13954890 - 13955012
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||| |||||||||||||| || |  |||||| |||||| ||| ||||||||||| |     
T  13954890 atggataattgttgctaaattcgtgctccaactttgatgatatgtt-gtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaa 13954988  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    ||| | ||||||||| ||||||||    
T  13954989 ataagtaaaaatgatcagttatga 13955012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 16821366 - 16821280
Alignment:
Q  165 tgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    |||||||||||||||||| |||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||| |||| |||||    
T  16821366 tgttatgtttgtatgcataaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgttaagctatga 16821280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 45582016 - 45581954
Alignment:
Q  25 tgaagctagagctagtagttggagataattaaggtaag-ggggttagtctttatcataatcat 86  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  45582016 tgaagctagagctaatagttggagataattaaggtaaggggggttagtttttatcataatcat 45581954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17205076 - 17205019
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  17205076 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 17205019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 38810868 - 38810941
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | |||| ||||| |||||||||||||||||  || |||||||||||    
T  38810868 taggagctaaagtgaagcttgggctaggaattggtgataactaaggtaagggggttagaattcatcataatcat 38810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 12031904 - 12031849
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggtt 68  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||    
T  12031904 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggtt 12031849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 13301323 - 13301396
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||  || |||||||||||    
T  13301323 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcat 13301396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 13311979 - 13312052
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||  || |||||||||||    
T  13311979 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcat 13312052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 14080756 - 14080715
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  14080756 aaattcgtgctccaactatgatgatatgtttgtatgcatgaa 14080715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17191936 - 17191879
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||| | | ||||| | |||| |||||||||||||||||||||||    
T  17191936 taggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttag 17191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 2449152 - 2449184
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  2449152 taaggtaagggggttagtctttatcataatcat 2449184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 16261809 - 16261777
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  16261809 taaggtaagggggttagtctttatcataatcat 16261777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 16933869 - 16933901
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  16933869 taaggtaagggggttagtctttatcataatcat 16933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 17912398 - 17912430
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  17912398 taaggtaagggggttagtctttatcataatcat 17912430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23492728 - 23492696
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  23492728 taaggtaagggggttagtctttatcataatcat 23492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 38168269 - 38168237
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  38168269 taaggtaagggggttagtctttatcataatcat 38168237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 53771397 - 53771365
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  53771397 taaggtaagggggttagtctttatcataatcat 53771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 3576290 - 3576347
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||||| |||||||||||| | ||||| | || | |||||||||||||||||||||||    
T  3576290 taggaggtaaagtgaagcttgggctaggaatttgtgataattaaggtaagggggttag 3576347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 11986173 - 11986262
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgtt 224  Q
    ||||||| ||||||||||||| |||| || |||||| || || ||||||| || ||| || |||||| |||||   ||||||||||||||    
T  11986173 attgttgttaaattcgtgctctaactgtgatgttattttcgtgtgcatgatttaatgataattgtatgattgtggttgaaattacatgtt 11986262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 15550987 - 15550922
Alignment:
Q  20 taaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    |||||||||||| | ||||| | |||| |||||||||| ||||||||||||  || ||||||||||    
T  15550987 taaagtgaagcttgggctaggaattggtgataattaagataagggggttagaattcatcataatca 15550922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 4145814 - 4145898
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcata 228  Q
    |||||||| |||||| |||| || |||||||| || ||||||||| || || ||| ||  |||||  ||||||||||||||||||    
T  4145814 aaattcgtactccaattatggtgatatgtttgaatacatgaattggtgataattgaattgttgttgatgaaattacatgttcata 4145898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 11986080 - 11986112
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  11986080 taaggtaagggggttagtcttcatcataatcat 11986112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 13954804 - 13954836
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  13954804 taaggtaagggggttagtctttaccataatcat 13954836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 14059214 - 14059254
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  14059214 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 14059254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 14285321 - 14285289
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  14285321 taaggtaagggggttagtcttcatcataatcat 14285289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 19947058 - 19947026
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  19947058 taaggtaagggggttagtcttcatcataatcat 19947026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 30153297 - 30153265
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||| ||||||||||||||    
T  30153297 taaggtaagggggttagtttttatcataatcat 30153265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 30207462 - 30207422
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  30207462 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 30207422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 33342236 - 33342204
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||| |||||||||||||||||||||||    
T  33342236 taaggtaagagggttagtctttatcataatcat 33342204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 45861154 - 45861122
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  45861154 taaggtaagggggttagtctttaccataatcat 45861122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 51961031 - 51961063
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  51961031 taaggtaagggggttagtcttcatcataatcat 51961063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 20627193 - 20627429
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaa-ttttcaa 107  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  20627193 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaacggggttagtctttatcataatcatcatcattttgtaaaattttcaa 20627292  T
Q  108 atgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgt 207  Q
    || ||||||||||| ||||||||||| ||||||| |||||||||||||||||| || || |||||||||||||| ||||||||| || |||||| |||||    
T  20627293 atattgtatgaattatgattatggataattgttgttaaattcgtgctccaactgtgatgatatgtttgtatgcacgaattgatgataattgtatgattgt 20627392  T
Q  208 ttgtgaaattacatgttcatatatgcaaaaatgataa 244  Q
    | |||||||||||||| || ||||| |||||||||||    
T  20627393 tggtgaaattacatgtccaaatatgtaaaaatgataa 20627429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 463075 - 462882
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  463075 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 462976  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || ||| |||||||||||||||||||| || |||||  |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  462975 tccaactgtgatgatatatttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 462882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 43642836 - 43643076
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaa 108  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  43642836 atcataggagcaaaagtgaagctagagctaatagttggagataattaagggaaggaggttagtctttatcataatcatcatcattttgtgaattttcaaa 43642935  T
Q  109 tgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattg 206  Q
    |||||||||||||||   ||  ||||| |||||||||||||| ||||||||| | || || |||||||||||||||||||||||| || |||||| ||||    
T  43642936 tgttgtatgaatttttgcatagtggataattgttgctaaatttgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattg 43643035  T
Q  207 tttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    || ||||||||||||||||| ||| | | ||||| ||||||    
T  43643036 ttggtgaaattacatgttcaaataggaacaaatgttaagtt 43643076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 19794584 - 19794823
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaa 108  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  19794584 atcataagagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcattattttgtaaa-tttcaaa 19794682  T
Q  109 tgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattg 206  Q
    |||||||||||||||   || |||||| ||||| | |||||||||||||||||| || || |||||||||||||||||||||||  || |||||| ||||    
T  19794683 tgttgtatgaatttttgcataatggataattgtcgttaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgataataattgtatgattg 19794782  T
Q  207 tttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    || ||||||||||||||||| ||| | | ||||||||||||    
T  19794783 ttggtgaaattacatgttcaaataggaacaaatgataagtt 19794823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 36982364 - 36982560
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcatttt-gtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 150  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   || |||||| ||||||||||||||||    
T  36982364 taaggtaagggggttagtctttatcataatcatcatcatttttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcg 36982463  T
Q  151 tgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |||||||||| || || ||||||||||| |||||||||||| || |||||  |||| | ||||||||||||||||| ||||| ||||||||||||||    
T  36982464 tgctccaactgtgatgatatgtttgtattcatgaattgatgataattgtaagattgctggtgaaattacatgttcaaatatgtaaaaatgataagtt 36982560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 8891581 - 8891386
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  8891581 taaggtaaaggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 8891482  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||| || |  |||||||||||||||||||||||| || |||||| |||||| | ||||||||||||||| ||| | | ||||||||||||    
T  8891481 gctccaactgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggcgaaattacatgttcaaataggaacaaatgataagtt 8891386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 19886661 - 19886772
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  19886661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaagt 19886760  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  19886761 gataagttatga 19886772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 240
Target Start/End: Original strand, 24341309 - 24341501
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcat----tttgtaaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| |||||||||||||||||    |||| || ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  24341309 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 24341408  T
Q  148 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatg 240  Q
    || |||| ||||| || || |||||||||||||||||||||||| || |||||| |||||| ||||||||| |||||||  |||| |||||||    
T  24341409 tcatgcttcaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattatatgttcaattatgtaaaaatg 24341501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 22863267 - 22863169
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcg 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   || |||||| ||||||||||||||||    
T  22863267 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaattgttgtatgaatttttgcataatggataattgttgctaaattcg 22863169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 25265390 - 25265502
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||     
T  25265390 atggataattgttgctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 25265489  T
Q  228 atatgcaaaaatg 240  Q
     |||| |||||||    
T  25265490 ttatgtaaaaatg 25265502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 22275122 - 22275045
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  22275122 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagcctttatcataatcat 22275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 22284355 - 22284278
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22284355 atcataggagcaaaagtgaagttagagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 22284278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 19689401 - 19689524
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  19689401 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 19689500  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  19689501 atatgtgaaaatgaaaagttatga 19689524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 23820334 - 23820211
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  23820334 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 23820235  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  23820234 atatgtgaaaatgaaaagttatga 23820211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 15633614 - 15633538
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  15633614 atcataggagcaaaagtgaagctagagttaatagttggagataattaaggtaaggaggttagtctttatcataatca 15633538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 14906440 - 14906563
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || ||||||||||||       
T  14906440 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 14906539  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  14906540 atatgtgaaaatgaaaagttatga 14906563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 17396653 - 17396775
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||| |||||||||||||| || |  |||||| |||||| ||||||||||||||| |     
T  17396653 atggataattgttgctaaattcgtgctccaactttgatgatatgtt-gtatgcatgaattgttgatgattgtatgattgttggtgaaattacatgtttaa 17396751  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    ||| | ||||||||||||||||||    
T  17396752 ataagtaaaaatgataagttatga 17396775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 20015274 - 20015151
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||| ||||||||||||||  || |||| | |||||| || ||||||||||||       
T  20015274 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgcatgcatgaattgataataattgtgtgattgttggttaaattacatgtttga 20015175  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  20015174 atatgtgaaaatgaaaagttatga 20015151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 7507894 - 7507967
Alignment:
Q  178 tgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    |||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| |||||| |||||||||||    
T  7507894 tgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaataataagttatga 7507967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 43646289 - 43646232
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  43646289 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 43646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 19689314 - 19689347
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||||    
T  19689314 ttaaggtaagggggttagtctttatcataatcat 19689347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 9652796 - 9652828
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  9652796 taaggtaagggggttagtctttatcataatcat 9652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 14906354 - 14906386
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  14906354 taaggtaagggggttagtctttatcataatcat 14906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 19660273 - 19660221
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggg 65  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||||||||||||    
T  19660273 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggg 19660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23820420 - 23820388
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  23820420 taaggtaagggggttagtctttatcataatcat 23820388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 86
Target Start/End: Complemental strand, 25213403 - 25213372
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||    
T  25213403 aaggtaagggggttagtctttatcataatcat 25213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 68238 - 68156
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa-ttgatgttagttgtataattgtttgtgaaattacatgttca 226  Q
    |||||||||||||| |||| ||||||||||| ||||||||| ||| || || ||| ||  ||||| |||||||| ||||||||    
T  68238 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 68156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 19666921 - 19666848
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||| | | ||||| | || | | |||||||||||||||||||||  || |||||||||||    
T  19666921 taggagctaaagtgaagtttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcat 19666848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 25305826 - 25305769
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||||| |||||||||||| | ||||  | |||| |||||||||||||||||||||||    
T  25305826 taggagttaaagtgaagcttgggctatgaattggtgataattaaggtaagggggttag 25305769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 31146032 - 31146138
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaa-tgt 111  Q
    ||||||||||||||||||| | |||||    | ||  ||| |||||||||||||||||  || |||||||||||| |  || |||||||||||||| |||    
T  31146032 taggagctaaagtgaagcttgggctagagaattgatctaactaaggtaagggggttagaattcatcataatcatctt--ttgtgtaaattttcaaattgt 31146129  T
Q  112 tgtatgaat 120  Q
    |||||||||    
T  31146130 tgtatgaat 31146138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 7507757 - 7507789
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  7507757 taaggtaagggggttagtcttcatcataatcat 7507789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 17396567 - 17396599
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  17396567 taaggtaagggggttagtctttaccataatcat 17396599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 20015360 - 20015328
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||| |||||    
T  20015360 taaggtaagggggttagtctttatcatgatcat 20015328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 22775206 - 22775246
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  22775206 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 22775246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 22780584 - 22780624
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  22780584 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 22780624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 28031134 - 28031166
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  28031134 taaggtaagggggttagtcttcatcataatcat 28031166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 33128404 - 33128372
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  33128404 taaggtaagggggttagtcttcatcataatcat 33128372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 3060344 - 3060113
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgtt 112  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3060344 taggagcaaaagtgaagctagagctaatagttggagataatgaaggtaagggggtaagtctttatcataatcatcatcattttgtaaattttcaaatgtt 3060245  T
Q  113 gtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtg 212  Q
     ||||||||||| |||||||| |||||||||||||||||||||||||| || |  ||| ||||||||||| |||||||| || |||||  | |||| |||    
T  3060244 atatgaattttgcttatggataattgttgctaaattcgtgctccaactgtgataatatatttgtatgcattaattgatgataattgtaatactgttggtg 3060145  T
Q  213 aaattacatgttcatatatgcaaaaatgataa 244  Q
    |||||||||||||| ||||| |||||||||||    
T  3060144 aaattacatgttcaaatatgtaaaaatgataa 3060113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 16212103 - 16211910
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  16212103 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaattttgcttatggacaattgttgctaaattcgtgc 16212004  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||||||||||||||| || |||||  ||||||||||||||| |||||||| ||||| ||||||||||||||    
T  16212003 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgtttgtgaaattgcatgttcaaatatgtaaaaatgataagtt 16211910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 13036938 - 13037133
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  13036938 taaggtaagggggttagtcttcaccataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 13037037  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||| || || |||||||||||||||||||||||| || |||||| ||||||  ||||||| |||||||| ||| | | ||||||||||||    
T  13037038 gctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttgatgaaattgcatgttcaaataggaacaaatgataagtt 13037133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 11580661 - 11580858
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcatttt-gtaaattttcaaatgttgtatgaattttg---attatggatgattgttgctaaattc 149  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    || |||||| ||| |||||||||||    
T  11580661 taaggtaaggggattagtctttatcataatcatcatcatttttgtaaattttcaaatgttgtatgaattttttgcataatggataattattgctaaattc 11580760  T
Q  150 gtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||||| || |  |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||| | | ||||||||||||    
T  11580761 gtgctccaactgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagtt 11580858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 36053003 - 36052808
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||   || |||||| ||||||||||||||  |    
T  36053003 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaatttttgtataatggataattgttgctaaatttat 36052904  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
     |||||||| || || || ||||||||||||||||||||| || || ||| |||||| || |||||||||||||| ||||| ||||||||||||||    
T  36052903 actccaactgtgatgatacgtttgtatgcatgaattgatgataattatatgattgttggtaaaattacatgttcaaatatgtaaaaatgataagtt 36052808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 10989661 - 10989550
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  10989661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 10989562  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  10989561 gataagttatga 10989550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 2437710 - 2437598
Alignment:
Q  139 ttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaa 238  Q
    |||||||||||||||||    | || ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  2437710 ttgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaa 2437611  T
Q  239 tgataagttatga 251  Q
    |||||||||||||    
T  2437610 tgataagttatga 2437598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 128 - 247
Target Start/End: Original strand, 47481031 - 47481150
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||     
T  47481031 atggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaa 47481130  T
Q  228 atatgcaaaaatgataagtt 247  Q
    ||||| ||||||||||||||    
T  47481131 atatgtaaaaatgataagtt 47481150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 13911024 - 13911135
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||    | || |||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  13911024 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttaattgtatgattgttggtgaaattacatgttcatatatgcaaaaat 13911123  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  13911124 gataagttatga 13911135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 32493901 - 32493978
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  32493901 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 32493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 18253842 - 18253954
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgca 234  Q
    |||||| ||||||||||||||||||| |  || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| || || |    
T  18253842 attgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgta 18253941  T
Q  235 aaaatgataagtt 247  Q
    |||||||||||||    
T  18253942 aaaatgataagtt 18253954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 11516490 - 11516367
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  11516490 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 11516391  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  11516390 atatgtgaaaatgaaaagttatga 11516367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 13321278 - 13321183
Alignment:
Q  129 tggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgtt 224  Q
    ||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||    
T  13321278 tggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 13321183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 15441564 - 15441687
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  15441564 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 15441663  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  15441664 atatgtgaaaatgaaaagttatga 15441687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 30262129 - 30262252
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  30262129 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 30262228  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  30262229 atatgtgaaaatgaaaagttatga 30262252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 7293279 - 7293156
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||| ||  || |||||| |||||| || |||||||||||| |     
T  7293279 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattaataataattgtatgattgttggttaaattacatgtttaa 7293180  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  7293179 atatgtgaaaatgaaaagttatga 7293156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 16478987 - 16479069
Alignment:
Q  165 tgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  16478987 tgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 16479069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 126815 - 126738
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  126815 atcataggagcaaaaatgaagttagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 126738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 25292338 - 25292461
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||| ||||||||||| || || |||||||||||| |||||||| || |  |||||| |||||| ||||||||||||||| |     
T  25292338 atggataattgttgctaaatttgtgctccaactttgatgatatgtttgtatgtatgaattgttgatgattgtatgattgttggtgaaattacatgtttaa 25292437  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    ||||| ||||| |||||| |||||    
T  25292438 atatgtaaaaaggataagctatga 25292461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 1936872 - 1936949
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||| ||| ||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  1936872 atcatagaagcaaaagtgaagctagagttaatagttggagataattaaggtaaggaggttagtttttatcataatcat 1936949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 13572924 - 13572817
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgata 243  Q
    ||||||||||||   || || ||||||||||||||||||||||||||| |  |||| | |||||| ||||||||||||||| | ||||| ||||||||||    
T  13572924 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtgtgattgttggtgaaattacatgtttaaatatgtaaaaatgata 13572825  T
Q  244 agttatga 251  Q
    ||||||||    
T  13572824 agttatga 13572817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 111124 - 111201
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||||||||||| ||||||  |||||| |||||||||||||||||||||||| || |||||||||||    
T  111124 atcataggagcaaaagtgaagcttgagctaaaagttggtgataattaaggtaagggggttagttttcatcataatcat 111201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 7283911 - 7283987
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||| ||||||||||| ||| || || |||| |||||||||||||||||||||||| || ||||||||||    
T  7283911 atcataggagcaaaagtgaagcttgagttaataattggtgataattaaggtaagggggttagttttcatcataatca 7283987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 13377924 - 13377819
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgtt 112  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||  || |||||||||||  |  |  ||||||||||||| ||||    
T  13377924 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagaattcatcataatcat--ttttagtgtaaattttcaattgtt 13377827  T
Q  113 gtatgaat 120  Q
    ||||||||    
T  13377826 gtatgaat 13377819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 249
Target Start/End: Original strand, 295893 - 296087
Alignment:
Q  56 aggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaa-ttttg-attatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||| ||||| | ||||||  |||||||||| |  |||||||||  ||||||||| ||||| || ||| || ||||||||||||||||||     
T  295893 aggtaagggggtttgtcttcaacataattctcatcatttt-tgcattttcaaactttgtatgaaattttgcataatgaataattgttgctaaattcgtgt 295991  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttat 249  Q
    || || |  | |||||||||||| ||||||||| |||| || |  ||| |||||| |||||||| |||||| |  |||| |||||||| |||||||    
T  295992 tctaattgaggtgttatgtttgtgtgcatgaatcgatgataatgttatgattgttggtgaaatttcatgttgaattatgtaaaaatgagaagttat 296087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 13389750 - 13389693
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  13389750 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 13389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 36024485 - 36024372
Alignment:
Q  54 taaggtaaggggg-ttagtctttatcataatcatcatcat----tttgtaaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaa 146  Q
    ||||||||||||| |||||||| |||||||||||||||||    |||  || ||||||||||| |||||||||||   ||  ||||| |||||| |||||    
T  36024485 taaggtaaggggggttagtcttcatcataatcatcatcatcatttttacaatttttcaaatgtggtatgaatttttcataattggataattgtttctaaa 36024386  T
Q  147 ttcgtgctccaact 160  Q
    ||||||||||||||    
T  36024385 ttcgtgctccaact 36024372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 2029276 - 2029244
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  2029276 taaggtaagggggttagtctttatcataatcat 2029244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 7293365 - 7293333
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  7293365 taaggtaagggggttagtctttatcataatcat 7293333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 11516576 - 11516544
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  11516576 taaggtaagggggttagtctttatcataatcat 11516544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 14113903 - 14113935
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  14113903 taaggtaagggggttagtctttatcataatcat 14113935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 15441478 - 15441510
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  15441478 taaggtaagggggttagtctttatcataatcat 15441510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 15709501 - 15709428
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatc----attttgtaaattttcaaatgttgtatgaatttt 123  Q
    ||||||||| || |||||||| |||||||||||||||    |||||| || ||||||||||| |||||||||||    
T  15709501 taaggtaagaggattagtcttcatcataatcatcatcatcaattttgcaatttttcaaatgtggtatgaatttt 15709428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 16919926 - 16919870
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggtta 69  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||| |||||||||||    
T  16919926 taggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggtta 16919870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 30262043 - 30262075
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  30262043 taaggtaagggggttagtctttatcataatcat 30262075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 42056188 - 42056220
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  42056188 taaggtaagggggttagtctttatcataatcat 42056220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 13377775 - 13377693
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa-ttgatgttagttgtataattgtttgtgaaattacatgttca 226  Q
    |||||||||||||| |||| ||||||||||| ||||||||| ||| || || ||| ||  ||||| |||||||| ||||||||    
T  13377775 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 13377693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 371449 - 371417
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  371449 taaggtaagggggttagtcttcatcataatcat 371417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 3049937 - 3049905
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||| ||||||||||||||    
T  3049937 taaggtaagggggttagtttttatcataatcat 3049905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 13321366 - 13321334
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  13321366 taaggtaagggggttagtcttcatcataatcat 13321334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 14113989 - 14114021
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaact 160  Q
    |||||| ||||||||||||||||||||||||||    
T  14113989 atggataattgttgctaaattcgtgctccaact 14114021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 14423639 - 14423671
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaact 160  Q
    |||||| ||||||||||||||||||||||||||    
T  14423639 atggataattgttgctaaattcgtgctccaact 14423671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 15516765 - 15516793
Alignment:
Q  58 gtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||    
T  15516765 gtaagggggttagtctttatcataatcat 15516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 25124482 - 25124450
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  25124482 taaggtaagggggttagtcttcatcataatcat 25124450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 47480944 - 47480976
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  47480944 taaggtaagggggttagtcttcatcataatcat 47480976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 146; Significance: 5e-77; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 48935 - 48742
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  48935 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 48836  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||| | ||||||||||||||    
T  48835 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaaaaaatgataagtt 48742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 36320 - 36234
Alignment:
Q  165 tgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  36320 tgttatgtttgtatgtatgaattgatgttagttgtatgattgttggtgaaattacatattcatatatgcaaaaatgataagttatga 36234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 61122 - 61154
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  61122 taaggtaagggggttagtcttcatcataatcat 61154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 16404855 - 16405094
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaa 108  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  16404855 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcatta-tttgtaaattttcaaa 16404953  T
Q  109 tgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattg 206  Q
    |||||||||||||||   || |||||| ||| |||||||||||||||||||||| || || |||||||||||||||||||||||| || |||||| ||||    
T  16404954 tgttgtatgaatttttgcatgatggataattattgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattg 16405053  T
Q  207 tttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    || ||||||||||||||||| ||| | | ||||| ||||||    
T  16405054 ttggtgaaattacatgttcaaataggaacaaatgttaagtt 16405094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 16193643 - 16193835
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  16193643 taaggtaagggg-ttagtctttatcataatcatcatcatttggtaaattttcaaatattgtatgaattttgcttatggatgattgttgctaaattcgtgc 16193741  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |||||||||| || |||||||||||||||||||||||| || |||||| |||||| | ||||||||||||||| ||||| ||||||||||||||    
T  16193742 tccaactatgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggggaaattacatgttcaaatatgtaaaaatgataagtt 16193835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 24928716 - 24928910
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgt-aaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 152  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24928716 taaggtaatggggttagtctttatcataatcatcgtcattttgtgaaattttcaaatgttgtatgaattttgattatggataattgttgctaaattcgtg 24928815  T
Q  153 ctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |||||||| || |  |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||| | | ||||||||||||    
T  24928816 ctccaactgtgattatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagtt 24928910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 43373392 - 43373587
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||   || |||||| |||  ||||||||||||    
T  43373392 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaatttttgtataatggataattaatgctaaattcgt 43373491  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||| || || || ||||||||||||||||||||| || || ||| |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  43373492 gctccaactgtgatgatacgtttgtatgcatgaattgatgataattatatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 43373587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 30120974 - 30120863
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  30120974 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatttatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 30120875  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  30120874 gataagttatga 30120863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 16674392 - 16674503
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || |||||||||| |||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  16674392 tgctaaattcgtgctctttctgtgatgttatgtttttatgcatgaatttatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 16674491  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  16674492 gataagttatga 16674503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 274843 - 274766
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  274843 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 274766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 641006 - 641083
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  641006 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 826812 - 826889
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  826812 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 826889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 24716717 - 24716794
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  24716717 atcataggagcaaaagtgaagctagagctaatagttggtgataattaaggtaagggggttagtctttatcataatcat 24716794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 5238350 - 5238227
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  5238350 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 5238251  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  5238250 atatgtgaaaatgaaaagttatga 5238227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 6774258 - 6774365
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||| ||||||||||  ||| || ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||    
T  6774258 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 6774357  T
Q  240 gataagtt 247  Q
    ||||||||    
T  6774358 gataagtt 6774365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 22907214 - 22907337
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  22907214 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 22907313  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  22907314 atatgtgaaaatgaaaagttatga 22907337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 24549233 - 24549126
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||| ||||||||||  ||| || ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||    
T  24549233 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 24549134  T
Q  240 gataagtt 247  Q
    ||||||||    
T  24549133 gataagtt 24549126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 24661248 - 24661371
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  24661248 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 24661347  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  24661348 atatgtgaaaatgaaaagttatga 24661371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 43685809 - 43685686
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  43685809 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 43685710  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  43685709 atatgtgaaaatgaaaagttatga 43685686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 17345832 - 17345709
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||| |||||||||||| |||| || |||||||||| |||||||||||||||| || |||||| |||||| ||||||| |||||||||     
T  17345832 atggataattgttgcgaaattcgtgctctaactgtgatgttatgtttatatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaa 17345733  T
Q  228 atatgcaaaaatgataagttatga 251  Q
     |||| |||||||  |||||||||    
T  17345732 ttatgtaaaaatgtgaagttatga 17345709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 21844576 - 21844683
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgata 243  Q
    ||||||||||||   || || ||||||||||||||||||||||||||| |  |||||| |||||| ||||||||||||||| | ||||| ||||||||||    
T  21844576 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgata 21844675  T
Q  244 agttatga 251  Q
    ||||||||    
T  21844676 agttatga 21844683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 21851969 - 21852076
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgata 243  Q
    ||||||||||||   || || ||||||||||||||||||||||||||| |  |||||| |||||| ||||||||| ||||| | ||||| ||||||||||    
T  21851969 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattaaatgtttaaatatgtaaaaatgata 21852068  T
Q  244 agttatga 251  Q
    ||||||||    
T  21852069 agttatga 21852076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 222753 - 222802
Alignment:
Q  202 aattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  222753 aattgttggtgaaattacatgttcatatatgcaaaaatgataagttatga 222802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 691908 - 691957
Alignment:
Q  202 aattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  691908 aattgttggtgaaattacatgttcatatatgcaaaaatgataagttatga 691957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 736376 - 736425
Alignment:
Q  202 aattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  736376 aattgttggtgaaattacatgttcatatatgcaaaaatgataagttatga 736425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 860271 - 860320
Alignment:
Q  202 aattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  860271 aattgttggtgaaattacatgttcatatatgcaaaaatgataagttatga 860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 39115675 - 39115598
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||||||||||| |||||| |||||||  |||||||||||||||| |||||| || |||||||||||    
T  39115675 atcataggagcaaaagtgaagcttgagctaatagttggtaataattaaggtaagggtgttagttttcatcataatcat 39115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17285600 - 17285543
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | | ||| | |||| |||||||||||||||||||||||    
T  17285600 taggagctaaagtgaagcttgggttaggaattggtgataattaaggtaagggggttag 17285543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 21198005 - 21198062
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||| ||||||||||||    
T  21198005 taggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggttag 21198062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 5238436 - 5238404
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  5238436 taaggtaagggggttagtctttatcataatcat 5238404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 22907128 - 22907160
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  22907128 taaggtaagggggttagtctttatcataatcat 22907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 24385652 - 24385684
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  24385652 taaggtaagggggttagtctttatcataatcat 24385684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 24661162 - 24661194
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  24661162 taaggtaagggggttagtctttatcataatcat 24661194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 43685895 - 43685863
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  43685895 taaggtaagggggttagtctttatcataatcat 43685863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 2545297 - 2545265
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  2545297 taaggtaagggggttagtcttcatcataatcat 2545265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 3431176 - 3431208
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  3431176 taaggtaagggggttagtcttcatcataatcat 3431208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 22886686 - 22886654
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  22886686 taaggtaagggggttagtcttaatcataatcat 22886654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 54118123 - 54118363
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaa 108  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  54118123 atcataagagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcattattttgtgaattttcaaa 54118222  T
Q  109 tgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattg 206  Q
    |||||||||||||||   || |||||| |||||||||||||||||||||||| | || || |||||||||||||||||||||||| || |||||| ||||    
T  54118223 tgttgtatgaatttttgcataatggataattgttgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattg 54118322  T
Q  207 tttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    || ||||||||||||||||| ||| | | || |||||||||    
T  54118323 ttggtgaaattacatgttcaaataggaacaattgataagtt 54118363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 122226 - 122033
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  122226 taaggtaaggggattagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaatttgtgc 122127  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||||||||||||||| || |||||  |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  122126 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 122033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 13246769 - 13246574
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| ||||||| |||||||||    
T  13246769 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgttaaattcgt 13246670  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||| ||||| || || |||||||||||||||||||| ||| || |||||| |||||| ||||||||||||||||| ||| | | ||||||||||||    
T  13246669 gctacaactgtgatgatatgtttgtatgcatgaattaatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagtt 13246574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 240
Target Start/End: Original strand, 15675009 - 15675201
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcat----tttgtaaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| |||||||||||||||||    |||| || ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  15675009 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 15675108  T
Q  148 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatg 240  Q
    ||||||||||||| || || |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||  |||| |||||||    
T  15675109 tcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatg 15675201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 240
Target Start/End: Original strand, 10104170 - 10104362
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcat----tttgtaaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| |||||||||||||||||    |||  || ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  10104170 taaggtaagggggttagtcttcatcataatcatcatcatcatttttacaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 10104269  T
Q  148 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatg 240  Q
     |||||||||||| || || |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||  |||| |||||||    
T  10104270 ccgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatg 10104362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 47357906 - 47357795
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47357906 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatggattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 47357807  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  47357806 gataagttatga 47357795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 33241043 - 33240900
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcat----tttgtaaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| |||||||||||||||||    |||| || ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  33241043 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 33240944  T
Q  148 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 191  Q
    ||||||||||||| || || ||||||||||||||||||||||||    
T  33240943 tcgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 33240900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 26680463 - 26680340
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  26680463 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 26680364  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    ||||| |||||||| |||||||||    
T  26680363 atatgtaaaaatgaaaagttatga 26680340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 25119062 - 25119139
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  25119062 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggagttagtttttatcataatcat 25119139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 10488825 - 10488702
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || ||||||||||||       
T  10488825 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 10488726  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  10488725 atatgtgaaaatgaaaagttatga 10488702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 10644467 - 10644360
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgata 243  Q
    ||||||||||||   || || ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||| ||    
T  10644467 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatgtta 10644368  T
Q  244 agttatga 251  Q
    ||||||||    
T  10644367 agttatga 10644360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 16327926 - 16328049
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || ||||||||||||       
T  16327926 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 16328025  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  16328026 atatgtgaaaatgaaaagttatga 16328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 13048221 - 13048344
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| ||||||||||||||| ||||||||||    || ||||||||||||||||| |||||| |  |||||| |||||| ||||||||||||||| |     
T  13048221 atggataattgttgctaaattcatgctccaacttcaatgatatgtttgtatgcatgatttgatgatgattgtatgattgttggtgaaattacatgtttaa 13048320  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    ||||| ||||| ||||||||||||    
T  13048321 atatgtaaaaaggataagttatga 13048344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 5682383 - 5682460
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||||||||||  |||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  5682383 atcataggagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagtgggttagtttttatcataatcat 5682460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 31132657 - 31132545
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcat----tttgtaaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| |||||||| ||||||||    |||| || ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  31132657 taaggtaagggggttagtcttcatcataattatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 31132558  T
Q  148 tcgtgctccaact 160  Q
    |||||||||||||    
T  31132557 tcgtgctccaact 31132545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 31115865 - 31115795
Alignment:
Q  155 ccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttc 225  Q
    |||||| || || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||    
T  31115865 ccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttc 31115795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 40885570 - 40885652
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttca 226  Q
    |||||||| |||||||| || || ||||||||||||||||||||| || || ||| ||  ||||| |||||||||||||||||    
T  40885570 aaattcgtactccaactgtggtgctatgtttgtatgcatgaattggtgataattgaatgtttgttggtgaaattacatgttca 40885652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 41165808 - 41165881
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||| |||||||||||||  || |||||||||||    
T  41165808 taggagctaaagtgaagcttgggctaggaattggtgataattaacgtaagggggttagaattcatcataatcat 41165881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 47534933 - 47534990
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | || || | |||| |||||||||||||||||||||||    
T  47534933 taggagctaaagtgaagcttgggcgaggaattggtgataattaaggtaagggggttag 47534990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 14952117 - 14952085
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  14952117 taaggtaagggggttagtctttatcataatcat 14952085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 15135907 - 15135939
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  15135907 taaggtaagggggttagtctttatcataatcat 15135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 15272211 - 15272243
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  15272211 taaggtaagggggttagtctttatcataatcat 15272243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 16327840 - 16327872
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  16327840 taaggtaagggggttagtctttatcataatcat 16327872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 16609013 - 16609045
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  16609013 taaggtaagggggttagtctttatcataatcat 16609045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 26680549 - 26680517
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  26680549 taaggtaagggggttagtctttatcataatcat 26680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 15045074 - 15044992
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa-ttgatgttagttgtataattgtttgtgaaattacatgttca 226  Q
    |||||||||||||| |||| ||||||||||| ||||||||| ||| || || ||| ||  ||||| |||||||| ||||||||    
T  15045074 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 15044992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 8045304 - 8045272
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  8045304 taaggtaagggggttagtcttcatcataatcat 8045272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 16523178 - 16523146
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  16523178 taaggtaagggggttagtcttcatcataatcat 16523146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 3508 - 3701
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  3508 taaggtaagggggttagtctttgtcataatcatcttcattttgtaaattttcaaaagttgtatgaattttgattatagataattgttgctaaattcgtgc 3607  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  3608 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 3701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 1462 - 1268
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgt-aaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 152  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  1462 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaattttcaaatgttgtatgaatttttcttatggataattgttgctaaattcgtg 1363  T
Q  153 ctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |||||||| || || |||||| ||||||||||||||||  || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  1362 ctccaactttgatgatatgttagtatgcatgaattgataataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 54 - 244
Target Start/End: Complemental strand, 42066 - 41876
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42066 taaggtaagggggttggtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 41967  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataa 244  Q
    ||||||| || || |||||||||||||||||||||||| || ||||   |||||| ||||||||||||| ||| ||||| |||||||||||    
T  41966 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtcatattgttggtgaaattacatgctcaaatatgtaaaaatgataa 41876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 56 - 247
Target Start/End: Original strand, 51110 - 51301
Alignment:
Q  56 aggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctc 155  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  51110 aggtaaggagattagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgctc 51209  T
Q  156 caactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||| || || ||| |||||||||||||||||||| || |||||  |||||| ||||||||||||||||| ||| | ||||||||||||||    
T  51210 caactgtgatgatatatttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaataggtaaaaatgataagtt 51301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 5990 - 6183
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||||||||||||||  ||| |||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  5990 taaggtaagggggttagtctttatcataatcattttcactttgcaaattctcaaatgttgtatgaattgtgattatggataattgttgctaaattcgtgc 6089  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| |||||| |||||||    
T  6090 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaataataagtt 6183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 882 - 1075
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||||||||||||||| ||| |||  ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  882 taaggtaagggggttagtctttatcataatcatcttcactttacaaattctcaaatgttgtatgaattgtgattatggataattgttgctaaattcgtgc 981  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| |||||| |||||||    
T  982 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaataataagtt 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 172242 - 172049
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  172242 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtataaattttgattatggataactgttgctaaatacgtgc 172143  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||| ||||||||||| || |||||| |||| | ||||||||||||||||| ||| | | ||||||||||||    
T  172142 tccaactgtgatgatatgtttgtatggatgaattgatgataattgtatgattgatggtgaaattacatgttcaaataggaacaaatgataagtt 172049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 177945 - 177752
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  177945 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtataaattttgattatggataactgttgctaaatacgtgc 177846  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||| ||||||||||| || |||||| |||| | ||||||||||||||||| ||| | | ||||||||||||    
T  177845 tccaactgtgatgatatgtttgtatggatgaattgatgataattgtatgattgatggtgaaattacatgttcaaataggaacaaatgataagtt 177752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 23507302 - 23507109
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23507302 taaggtaagggggttagtctttatcataatcatctccattttgtaagatttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 23507203  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||  | || || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  23507202 tccatttgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 23507109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 27182471 - 27182666
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| ||||||||||||||| |    
T  27182471 taaggtaagggggttagtcttcatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcat 27182570  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||| || || |||||||||||||||||| ||||| || |||||| ||||||  |||||||||||||||| ||| | | ||||||||||||    
T  27182571 gctccaactgtgatgatatgtttgtatgcatgaactgatgataattgtatgattgttgatgaaattacatgttcaaataggaacaaatgataagtt 27182666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 54 - 240
Target Start/End: Original strand, 18530988 - 18531179
Alignment:
Q  54 taaggtaagggggttagtctttatcataatc---atcatcattttgtaaattttcaaatgttgtatgaat-tttgattat-ggatgattgttgctaaatt 148  Q
    ||||||||||||||||||||| |||||||||   |||||||||||| || ||||||||||| |||||||| ||| || || |||| ||||||||||||||    
T  18530988 taaggtaagggggttagtcttcatcataatcgtcatcatcattttgcaatttttcaaatgtggtatgaatgtttcataattggataattgttgctaaatt 18531087  T
Q  149 cgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatg 240  Q
    |||||||||||| || || |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||  |||| |||||||    
T  18531088 cgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatg 18531179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 240
Target Start/End: Original strand, 22053753 - 22053945
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcat----tttgtaaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||||||||||||||| |||||||||||||||||    |||| || ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  22053753 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgaaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 22053852  T
Q  148 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatg 240  Q
    ||||||||||||| || || |||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||  |||| |||||||    
T  22053853 tcgtgctccaactgtgatgatatgtttgtatgtatgaattgatgatagttgtatgattgttggtgaaattacatgttcaattatgtaaaaatg 22053945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 19500151 - 19500040
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19500151 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 19500052  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  19500051 gataagttatga 19500040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 22366481 - 22366592
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22366481 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 22366580  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  22366581 gataagttatga 22366592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 25426880 - 25426769
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25426880 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 25426781  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  25426780 gataagttatga 25426769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 143 - 251
Target Start/End: Original strand, 18777995 - 18778103
Alignment:
Q  143 taaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgat 242  Q
    |||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18777995 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaatgat 18778094  T
Q  243 aagttatga 251  Q
    |||||||||    
T  18778095 aagttatga 18778103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 12626 - 12515
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  12626 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaagt 12527  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  12526 gataagttatga 12515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 21073595 - 21073706
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21073595 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatggatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 21073694  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  21073695 gataagttatga 21073706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 143 - 251
Target Start/End: Original strand, 43443398 - 43443506
Alignment:
Q  143 taaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgat 242  Q
    |||||||||||||   || || ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  43443398 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaatgat 43443497  T
Q  243 aagttatga 251  Q
    |||||||||    
T  43443498 aagttatga 43443506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 4199985 - 4200096
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||    | || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  4199985 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 4200084  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  4200085 gataagttatga 4200096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 20623232 - 20623109
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  20623232 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 20623133  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  20623132 atatgtgaaaatgaaaagttatga 20623109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 21233528 - 21233651
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || |||||||||||| |     
T  21233528 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaa 21233627  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  21233628 atatgtgaaaatgaaaagttatga 21233651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 29188284 - 29188391
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||| ||||||||||  ||| || ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||    
T  29188284 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 29188383  T
Q  240 gataagtt 247  Q
    ||||||||    
T  29188384 gataagtt 29188391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 34939540 - 34939417
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| | ||||||||||||||||||| |||| || ||||||||||||||||||||||||||| || |||||| |||||| ||||||| |||||||||     
T  34939540 atggataactgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaa 34939441  T
Q  228 atatgcaaaaatgataagttatga 251  Q
     |||| |||||||  |||||||||    
T  34939440 ttatgtaaaaatgtgaagttatga 34939417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 25900408 - 25900529
Alignment:
Q  130 ggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatat 229  Q
    |||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||| || |||||| |||||| || |||||| |||||   ||    
T  25900408 ggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggttaaattatatgtttgaat 25900507  T
Q  230 atgcaaaaatgataagttatga 251  Q
    |||  ||||||| |||||||||    
T  25900508 atgtgaaaatgaaaagttatga 25900529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 37053007 - 37052911
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgtt 224  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || ||||||||||||    
T  37053007 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 37052911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 16536460 - 16536337
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||| ||  || |||||| |||||| || ||||||||||||       
T  16536460 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaatttataataattgtatgattgttggttaaattacatgtttga 16536361  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  16536360 atatgtgaaaatgaaaagttatga 16536337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 27010089 - 27009982
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgata 243  Q
    ||||||||||||   || || ||||||||||||||||||||||||||| |  |||||| | |||| ||||||||||||||| | ||||| ||||||||||    
T  27010089 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgagtgttggtgaaattacatgtttaaatatgtaaaaatgata 27009990  T
Q  244 agttatga 251  Q
    ||||||||    
T  27009989 agttatga 27009982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 11584450 - 11584374
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||  || ||||||||||    
T  11584450 atcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagaattcatcataatca 11584374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 5450695 - 5450768
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | |||   ||||||||||||||||||||||  || |||||||||||    
T  5450695 taggagctaaagtgaagcttgggctaggaattgataataattaaggtaagggggttagaattcatcataatcat 5450768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 21222462 - 21222519
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||||||| |||||||||    
T  21222462 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtatgggggttag 21222519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 16105999 - 16105967
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  16105999 taaggtaagggggttagtctttatcataatcat 16105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 20623318 - 20623286
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  20623318 taaggtaagggggttagtctttatcataatcat 20623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 21233442 - 21233474
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  21233442 taaggtaagggggttagtctttatcataatcat 21233474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 25900320 - 25900352
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  25900320 taaggtaagggggttagtctttatcataatcat 25900352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 37053093 - 37053061
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  37053093 taaggtaagggggttagtctttatcataatcat 37053061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 29918212 - 29918127
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatg-aattgatgttagttgtataattgtttgtgaaattacatgttcata 228  Q
    ||||||||||||||| |||| || |||||||| || |||| |||||||| || ||| ||  ||||| |||||||| ||||||||||    
T  29918212 aaattcgtgctccaattatgatgatatgtttgaatacatgaaattgatgataattgaattgttgttggtgaaattgcatgttcata 29918127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 32950951 - 32950862
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgtt 224  Q
    ||||||| ||||||||||||| |||| || |||||| || || || |||| |||||| || |||||| |||||   ||||||||||||||    
T  32950951 attgttgttaaattcgtgctctaactgtgatgttattttcgtgtgtatgatttgatgataattgtatgattgtggttgaaattacatgtt 32950862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 108728 - 108760
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  108728 taaggtaagggggttagtcttcatcataatcat 108760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 9730278 - 9730310
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  9730278 taaggtaagggggttagtcttcatcataatcat 9730310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 16536546 - 16536514
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||| ||||||||||||||||||||||||||||    
T  16536546 taagataagggggttagtctttatcataatcat 16536514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 16595753 - 16595713
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  16595753 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 16595713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 4e-62; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 23153786 - 23153591
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| |||||| ||||||||||    
T  23153786 taaggtaagggggttagtcttcatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgtttctaaattcgt 23153687  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||| || || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||| | | ||||||||||||    
T  23153686 gctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagtt 23153591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 55 - 251
Target Start/End: Original strand, 14626045 - 14626241
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgct 154  Q
    |||||||||||||||||  |||||| ||||||| ||| |||  ||||| ||||||||||| |||||| ||||||||||| ||| ||||||||||||||||    
T  14626045 aaggtaagggggttagttattatcacaatcatcttcactttacaaattctcaaatgttgtttgaattgtgattatggataattattgctaaattcgtgct 14626144  T
Q  155 ccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    |   || || ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  14626145 cttgctgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttatga 14626241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 25175815 - 25175704
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25175815 tgctaaattcgtgctcttgctgtgttgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 25175716  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  25175715 gataagttatga 25175704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 27653983 - 27654094
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27653983 tgctaaattcgtgctcttgctgtgatgttatgcttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 27654082  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  27654083 gataagttatga 27654094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 16825752 - 16825865
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgta--taattgtttgtgaaattacatgttcatatatgcaaaa 237  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  16825752 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtaattaattgttggtgaaattacatgttcatatatgcaaaa 16825851  T
Q  238 atgataagttatga 251  Q
    ||||||||||||||    
T  16825852 atgataagttatga 16825865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 19983147 - 19983224
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  19983147 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 19983224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 23148335 - 23148266
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt 123  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23148335 taaggtaagggggttagtcttcatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt 23148266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 35015012 - 35015089
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  35015012 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 35015089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 35009439 - 35009551
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| ||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||| || |||||| |||||| |||||||||||||||||     
T  35009439 atggataattgttgctaaattcgtgctctaactgtgatgttaagtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 35009538  T
Q  228 atatgcaaaaatg 240  Q
     |||| |||||||    
T  35009539 ttatgtaaaaatg 35009551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 1657748 - 1657871
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| ||||||||||||||||||||| |||| || ||||||||||| ||||||||||||||| || |||||| |||||| ||||||| |||||||||     
T  1657748 atggataattgttgctaaattcgtgctctaactgtgatgttatgtttggatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaa 1657847  T
Q  228 atatgcaaaaatgataagttatga 251  Q
     |||| |||||||  |||||||||    
T  1657848 ttatgtaaaaatgtgaagttatga 1657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 247
Target Start/End: Original strand, 1650020 - 1650212
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||||||||||||||  | |||||| |  |||||  ||||||||||||  | | || ||| |  |||  ||||| ||||||    
T  1650020 ttaaggtaagggggttagtctttatcataatcatg-taattttgca--ttttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgt 1650116  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||  ||| || ||||| ||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| || |||||||||||    
T  1650117 gctcttactgtgatgttacgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaagaatgataagtt 1650212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 15862734 - 15862611
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||| |||||||||||||| |||| || ||||||||||||||||||||||||||| || |||||| |||||| ||||||| |||||||||     
T  15862734 atggataattgttactaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaa 15862635  T
Q  228 atatgcaaaaatgataagttatga 251  Q
     |||| | |||||  |||||||||    
T  15862634 ttatgtataaatgtgaagttatga 15862611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 18583717 - 18583640
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || |||||||||||    
T  18583717 atcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagttttcatcataatcat 18583640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 21623563 - 21623506
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  21623563 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 21623506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 27751688 - 27751603
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtga 213  Q
    |||||| | ||| ||||||||||||||| || | || |||||||||||||||||||||||||||  | |||||| |||||| ||||    
T  27751688 atggataaatgtagctaaattcgtgctctaattgtgatgttatgtttgtatgcatgaattgatgacaattgtatgattgttggtga 27751603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 29666137 - 29666041
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgtt 224  Q
    |||||| ||||||| ||||||||||||| | || || |||||| ||  |||| ||||||||||| || |||||| |||||  |||||||||||||||    
T  29666137 atggataattgttgttaaattcgtgctctagctgtgatgttattttcttatgtatgaattgatgataattgtatgattgtgggtgaaattacatgtt 29666041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 22361619 - 22361676
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| |  |||| | |||| |||||||||||||||||||||||    
T  22361619 taggagctaaagtgaagcttggcctaggaattggtgataattaaggtaagggggttag 22361676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 14152704 - 14152632
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||||||||||| | ||||| | || | | ||||||||| |||||||||| |||| ||||||||||    
T  14152704 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggcaagggggttattcttcatcataatca 14152632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 18002395 - 18002427
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  18002395 taaggtaagggggttagtctttatcataatcat 18002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23995279 - 23995247
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  23995279 taaggtaagggggttagtctttatcataatcat 23995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 26090091 - 26090059
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  26090091 taaggtaagggggttagtctttatcataatcat 26090059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 29605696 - 29605612
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcata 228  Q
    |||||||||||| || |||| || |||||||| |||||||||||  || || ||| ||  ||||| |||||||||||||||||||    
T  29605696 aaattcgtgctctaattatggtgatatgtttgaatgcatgaattagtgataattgaattgttgttggtgaaattacatgttcata 29605612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 86
Target Start/End: Complemental strand, 4991427 - 4991396
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||    
T  4991427 aaggtaagggggttagtctttatcataatcat 4991396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 15742120 - 15742150
Alignment:
Q  54 taaggtaagggggttagtctttatcataatc 84  Q
    |||||||||||||||||||||||||||||||    
T  15742120 taaggtaagggggttagtctttatcataatc 15742150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 1657661 - 1657693
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  1657661 taaggtaagggggttagtcttcatcataatcat 1657693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 15862821 - 15862789
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  15862821 taaggtaagggggttagtcttcatcataatcat 15862789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 18399184 - 18399144
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  18399184 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 18399144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 18823283 - 18823315
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  18823283 taaggtaagggggttagtcttcatcataatcat 18823315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 18839138 - 18839170
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  18839138 taaggtaagggggttagtcttcatcataatcat 18839170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 27751774 - 27751742
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  27751774 taaggtaagggggttagtcttcatcataatcat 27751742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 32276659 - 32276691
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  32276659 taaggtaagggggttagtcttcatcataatcat 32276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 53 - 247
Target Start/End: Original strand, 36836 - 37032
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||   || |||||| ||||||| ||||||||    
T  36836 ttaaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaatttttgcataatggataattgttgttaaattcg 36935  T
Q  151 tgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |||||||||| || || |||||||||||||||||||||||| || |||||   ||||| ||||||||||||||||| ||||| ||||||||||||||    
T  36936 tgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagcttgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 37032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 15322 - 15398
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||  || ||||||||||    
T  15322 atcataggagcaaaagtgaagcttgggctaatagttggagataattaaggtaagggggttagcattcatcataatca 15398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 54 - 226
Target Start/End: Original strand, 128095 - 128267
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  128095 taaggtaagggggttagtctttatcataatcatcttcattttgcaaattttcaaaagttgtatgaattttgcttatggataattgttgctaaattcgtgc 128194  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttca 226  Q
    | ||||| || || |||||||||||||||||||||||| || |||||  |||||| |||||||||||||||||    
T  128195 ttcaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttca 128267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 31700 - 31786
Alignment:
Q  165 tgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  31700 tgttatgtttgaatgcatgaattgatgttagttgtatgattgttggtgaaattacatattcatatatgcaaaaatgataagttatga 31786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 57 - 247
Target Start/End: Complemental strand, 19543 - 19350
Alignment:
Q  57 ggtaagggggttagtctttatcataatcatcatcatttt-gtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||   || |||||| |||||||||||||||||||    
T  19543 ggtaagggggttagtcttcatcataatcatcataatttttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgtgc 19444  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| || || |||||||||||||||||||||||| || |||||  |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  19443 tccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 19350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 128 - 247
Target Start/End: Complemental strand, 21553 - 21434
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||| || |||||  |||||| |||||||||||||||||     
T  21553 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 21454  T
Q  228 atatgcaaaaatgataagtt 247  Q
    ||||| ||||||||||||||    
T  21453 atatgtaaaaatgataagtt 21434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 26340 - 26534
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaa-ttttgattatggatgattgttgctaaattcgtg 152  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||| || ||||||||||||||||||    
T  26340 taaggtaagggggttagtctttatcataatcatgatcattttgtaaattttcaaatgttgtatgaatttttcataatgtataattgttgctaaattcgtg 26439  T
Q  153 ctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |||||||| || || ||||||||||||| |||||||||| || |||||  ||| || |||||| |||||||||| ||||| ||||||||||||||    
T  26440 ctccaactttgatgatatgtttgtatgcgtgaattgatgataattgtaagattattggtgaaagtacatgttcaaatatgtaaaaatgataagtt 26534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 8180 - 8292
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||| || || |||||| |||||| ||||||||||| |||||     
T  8180 atggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattggtgataattgtatgattgttggtgaaattacaggttcaa 8279  T
Q  228 atatgcaaaaatg 240  Q
     |||| |||||||    
T  8280 ttatgtaaaaatg 8292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 6877 - 6934
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    |||||| |||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  6877 taggagttaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 247366 - 247561
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  247366 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 247465  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||| |  || |||||||||||||||||||||||| || |||||| ||||   |||||||| |||||||| ||| | | ||||||||||||    
T  247466 gctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgagggtgaaatttcatgttcaaataggaacaaatgataagtt 247561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 34075 - 34107
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  34075 taaggtaagggggttagtcttcatcataatcat 34107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 9215 - 9022
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| |||||||| |||||||  |||||||||||||||||||    
T  9215 taaggtaagggggttagtctttatcataatcatcttcattttgcaaattttcaaaagttgtacgaattttgcttatggaaaattgttgctaaattcgtgc 9116  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||  | || |||||||||||||||||||||| |||| || |||||  |||||| |||||||||||||||||  |||| ||||||| ||||||    
T  9115 tccatttgtgatgttatgtttgtatgcatgaatcgatgataattgtaagattgttggtgaaattacatgttcaattatgtaaaaatgttaagtt 9022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 109; Significance: 6e-55; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 89378 - 89573
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||   || |||||| |||||||||||||||||    
T  89378 taaggtaagggggttagtcttcatcatgatcatcatcattttgtaaattttcaaatgttctatgaatttttgcataatggataattgttgctaaattcgt 89477  T
Q  152 gctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||| || || ||| |||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||| | | |||| |||||||    
T  89478 gctccaactgtgatgatatatttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaattataagtt 89573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 107708 - 107835
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 151  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||   || |||||| ||| |||||||||||||    
T  107708 taaggtaagggggttagtcttcatcatgatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataatttttgctaaattcgt 107807  T
Q  152 gctccaactatgttgttatgtttgtatg 179  Q
    ||||||||| || || ||| ||||||||    
T  107808 gctccaactgtgatgatatatttgtatg 107835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 86
Target Start/End: Complemental strand, 130911 - 130880
Alignment:
Q  55 aaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||    
T  130911 aaggtaagggggttagtctttatcataatcat 130880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 12450 - 12257
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaa-ttttgattatggatgattgttgctaaattcgtg 152  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  12450 taaggtaagggggttagtctttatcataatcatcttaattttgtaacttt-caaatgctgtatgaaattttgattatggataattgttgctaaattcgtg 12352  T
Q  153 ctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||| |||| || || |||||||||||||||||||||||| || |||||| |||||| |||||| |||||||| | || || ||||||||||||||    
T  12351 ctctaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaaatacatgtttaaatgtgtaaaaatgataagtt 12257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 272362 - 272169
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | | ||||||||| ||| |    
T  272362 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatattgtataaattttgattatggataaatattgctaaatacgtac 272263  T
Q  154 tccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||| |  || |||||||||||| ||||||||||| || |||||| |||| | | ||||||||||||||| ||| | | ||||||||||||    
T  272262 tccaactgtaatgatatgtttgtatgaatgaattgatgataattgtatgattgatggagaaattacatgttcaaataggaacaaatgataagtt 272169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 64 - 247
Target Start/End: Original strand, 4996 - 5180
Alignment:
Q  64 gggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttg-attatggatgattgttgctaaattcgtgctccaactat 162  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||| |||||||| |    
T  4996 gggttagtctttatcataatcattatcattttgtaaattttcaaatgttgtatgaatttttcataatggataattgttgctaaattcgtactccaactgt 5095  T
Q  163 gttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |  | ||||||||||||| |||||||||| || |||||  |||||| |||||| |||||||||| ||||| ||||||||||||||    
T  5096 gacgatatgtttgtatgcgtgaattgatgataattgtaagattgttggtgaaagtacatgttcaaatatgtaaaaatgataagtt 5180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 123087 - 123283
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcatttt-gtaaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 150  Q
    ||||||||||||||||||||| | |||||||||||| ||||| |||||||| |||||||||||||||||||   || |||||| ||||||||||||||||    
T  123087 taaggtaagggggttagtcttcaccataatcatcataatttttgtaaatttgcaaatgttgtatgaatttttgcataatggataattgttgctaaattcg 123186  T
Q  151 tgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |||||||| | || || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||| | | ||||||||||||    
T  123187 tgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagtt 123283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 146938 - 146838
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||    
T  146938 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttcctaaattcatgc 146839  T
Q  154 t 154  Q
    |    
T  146838 t 146838  T

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Target: scaffold0025; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 54 - 240
Target Start/End: Complemental strand, 9192 - 9000
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcat----tttgtaaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 147  Q
    ||||||||| | ||||||||| |||||||||||||||||    |||| || ||||||||||| ||||| |||||   ||  ||||| |||||||||||||    
T  9192 taaggtaagtgtgttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgtatttttcataattggataattgttgctaaat 9093  T
Q  148 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatg 240  Q
    |||||||||| || || || |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||  |||| |||||||    
T  9092 tcgtgctccatctgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 247
Target Start/End: Complemental strand, 149012 - 148865
Alignment:
Q  102 tttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgt 199  Q
    ||||||||||||||||||||||   || || ||| ||||||| |||||| ||||||||||| || || |||||||||||||||||||||||| || ||||    
T  149012 tttcaaatgttgtatgaatttttgcataattgataattgttgttaaatttgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgt 148913  T
Q  200 ataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    |  |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  148912 aagattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 148865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 1304 - 1415
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  1304 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 1403  T
Q  240 gataagttatga 251  Q
    ||||||||||||    
T  1404 gataagttatga 1415  T

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Target: scaffold0772 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 5785 - 5669
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgca 234  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |  |||||| |||||| ||||||||||||||| | ||||| |    
T  5785 attgttgctaaattcgtgctccaactttgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgta 5686  T
Q  235 aaaatgataagttatga 251  Q
    |||||||||||| ||||    
T  5685 aaaatgataagtcatga 5669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 5878 - 5846
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||| |||||||||    
T  5878 taaggtaagggggttagtctttaccataatcat 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 13769 - 13657
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||     
T  13769 atggataattgttgctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 13670  T
Q  228 atatgcaaaaatg 240  Q
     |||| |||||||    
T  13669 ttatgtaaaaatg 13657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 42751 - 42677
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| ||||||||||||   ||||||||||||||||| ||||||||||||||    
T  42751 atcataggagcaaaagtgaagctagagctaatagttggagata---aaggtaagggggttagtttttatcataatcat 42677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 13856 - 13824
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  13856 taaggtaagggggttagtcttcatcataatcat 13824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 48443 - 48331
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgca 234  Q
    |||||||||||||||||||||||||| |  || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| || || |    
T  48443 attgttgctaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgta 48344  T
Q  235 aaaatgataagtt 247  Q
    |||||||||||||    
T  48343 aaaatgataagtt 48331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 20569 - 20493
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||| ||| ||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  20569 atcataggagcaaaaatgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 20493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 108003 - 107891
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgca 234  Q
    |||||| ||||||||||||||||||| |  || |||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| || ||||    
T  108003 attgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgca 107904  T
Q  235 aaaatgataagtt 247  Q
    |||||||||||||    
T  107903 aaaatgataagtt 107891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 64527 - 64639
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaatt-----gatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaa 238  Q
    ||||||||||||   || || |||||||||| ||||||||||||     |||| |  |||||| |||||| ||||||||||||||| | ||||| |||||    
T  64527 aaattcgtgctcttgctgtgatgttatgtttatatgcatgaattatattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaa 64626  T
Q  239 tgataagttatga 251  Q
    |||||||||||||    
T  64627 tgataagttatga 64639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 89863 - 89905
Alignment:
Q  143 taaattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  89863 taaattcgtgctccaactatgatgatatgtttgtatgcatgaa 89905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 247
Target Start/End: Original strand, 534 - 653
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||     
T  534 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 633  T
Q  228 atatgcaaaaatgataagtt 247  Q
    ||| | | ||||||| ||||    
T  634 ataggaacaaatgatgagtt 653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 80264 - 80187
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  80264 atcataggagcaaaagtgaagcttgagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 80187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 41911 - 41799
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| ||||||| ||||||||||||| |||| || ||||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||     
T  41911 atggataattgttgttaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 41812  T
Q  228 atatgcaaaaatg 240  Q
     |||| |||||||    
T  41811 ttatgtaaaaatg 41799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 41997 - 41957
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattt 94  Q
    ||||||||||||||||||||| |||||||||||  ||||||    
T  41997 taaggtaagggggttagtcttcatcataatcatgttcattt 41957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 34460 - 34558
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttca 226  Q
    |||||| ||| ||||||||||||||||| |||| || ||||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||    
T  34460 atggataattattgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 34558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 166119 - 166197
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatc 87  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||    
T  166119 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcatc 166197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 162036 - 162111
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatc 87  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||    
T  162036 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcatc 162111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 116410 - 116483
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||  || |||||||||||    
T  116410 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagatttcatcataatcat 116483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 31135 - 31212
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  31135 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcacaatcat 31212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 41709 - 41632
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  41709 atcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcacaatcat 41632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 37066 - 37189
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || ||||||||||||       
T  37066 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 37165  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  37166 atatgtgaaaatgaaaagttatga 37189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 36980 - 37012
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  36980 taaggtaagggggttagtctttatcataatcat 37012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 13325 - 13432
Alignment:
Q  140 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaat 239  Q
    ||||| ||||||||||  | | || ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||    
T  13325 tgctagattcgtgctcttagtgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 13424  T
Q  240 gataagtt 247  Q
    ||||||||    
T  13425 gataagtt 13432  T

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Target: scaffold0141 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 27058 - 26935
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || ||||||||||||       
T  27058 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 26959  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  26958 atatgtgaaaatgaaaagttatga 26935  T

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Target: scaffold0141; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 22796 - 22680
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgca 234  Q
    |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || ||||||||||||   |||||      
T  22796 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtg 22697  T
Q  235 aaaatgataagttatga 251  Q
    ||||||| |||||||||    
T  22696 aaaatgaaaagttatga 22680  T

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Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 22889 - 22857
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  22889 taaggtaagggggttagtctttatcataatcat 22857  T

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Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 27144 - 27112
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  27144 taaggtaagggggttagtctttatcataatcat 27112  T

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Target: scaffold0124 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 1582 - 1705
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcat 227  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||  || |||||| |||||| || ||||||||||||       
T  1582 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 1681  T
Q  228 atatgcaaaaatgataagttatga 251  Q
    |||||  ||||||| |||||||||    
T  1682 atatgtgaaaatgaaaagttatga 1705  T

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Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 1496 - 1528
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  1496 taaggtaagggggttagtctttatcataatcat 1528  T

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Target: scaffold0686 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 5735 - 5809
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  5735 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 5809  T

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Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 5941 - 6015
Alignment:
Q  12 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  5941 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 6015  T

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Target: scaffold0215 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 9374 - 9456
Alignment:
Q  165 tgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  9374 tgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 9456  T

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Target: scaffold0215; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 16272 - 16354
Alignment:
Q  165 tgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagtt 247  Q
    ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  16272 tgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagtt 16354  T

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Target: scaffold0342 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 307 - 385
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatc 87  Q
    ||||||||||| ||||||||||| |||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  307 atcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaacggggttattctttatcataatcatc 385  T

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Target: scaffold0116 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 283 - 177
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgata 243  Q
    ||||||||||||   || || ||||||||||||||||||||||||||| |  |||||| |||||| ||||||||||||||| | ||||| ||||||||||    
T  283 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgata 184  T
Q  244 agttatg 250  Q
    |||||||    
T  183 agttatg 177  T

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Target: scaffold0116; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 30494 - 30417
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||| ||| ||||||||||| ||| || || |||| |||||||||||||||||||||| | || |||||||||||    
T  30494 atcatagaagcaaaagtgaagcttgagttaataattggtgataattaaggtaagggggttatttttcatcataatcat 30417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 43224 - 43138
Alignment:
Q  165 tgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    |||||||||| |||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||| ||||||||||    
T  43224 tgttatgtttctatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgttaagttatga 43138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 21115 - 21227
Alignment:
Q  139 ttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaa 238  Q
    |||||||||||||||||    | || |||||||||||||| ||| |||||||| || || ||| |||||| ||||||||||||||||| ||||| |||||    
T  21115 ttgctaaattcgtgctcttgttgtgatgttatgtttgtatccattaattgatgataattatatgattgttagtgaaattacatgttcaaatatgtaaaaa 21214  T
Q  239 tgataagttatga 251  Q
    |||||||||||||    
T  21215 tgataagttatga 21227  T

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Target: scaffold0139; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 14086 - 14172
Alignment:
Q  165 tgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    |||||||| |||||||||||||||||| || || ||| |||||| ||||||||||||||| | ||||| ||||||||||||||||||    
T  14086 tgttatgtctgtatgcatgaattgatgataattatatgattgttagtgaaattacatgttgaaatatgtaaaaatgataagttatga 14172  T

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Target: scaffold0529 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 3215 - 3114
Alignment:
Q  139 ttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaa 238  Q
    |||||||||||||||||   || || |||||||||||||| |||||||||||| || |||||| |||||| |||||||||||||||||  |||| |||||    
T  3215 ttgctaaattcgtgctcttgctgtgatgttatgtttgtatccatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaa 3116  T
Q  239 tg 240  Q
    ||    
T  3115 tg 3114  T

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Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 5254 - 5327
Alignment:
Q  178 tgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatgcaaaaatgataagttatga 251  Q
    |||||||||||||| || |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  5254 tgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttatga 5327  T

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Target: scaffold1164 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 1777 - 1701
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  1777 atcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 1701  T

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Target: scaffold0122 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 19805 - 19881
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  19805 atcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 19881  T

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Target: scaffold0122; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 24109 - 24185
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||| ||| ||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  24109 atcataggagcaaaaatgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 24185  T

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Target: scaffold0361 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 3453 - 3360
Alignment:
Q  128 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacat 221  Q
    |||||| |||| |||||||||||||||| | || || ||||| ||||||||||||||||| ||| || |||||| |||||| ||||||||||||    
T  3453 atggataattgatgctaaattcgtgctctagctgtgatgttaagtttgtatgcatgaattaatgatatttgtatgattgttggtgaaattacat 3360  T

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Target: scaffold0876 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 170 - 94
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||| ||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  170 atcattggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 94  T

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Target: scaffold0310 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 6259 - 6335
Alignment:
Q  9 atcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 85  Q
    ||||||||||| ||||||||||| ||| || |||| || |||||||||||||||||||||||| || ||||||||||    
T  6259 atcataggagcaaaagtgaagcttgagttaatagtgggtgataattaaggtaagggggttagtgttcatcataatca 6335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 4 - 41
Alignment:
Q  48 gataattaaggtaagggggttagtctttatcataatca 85  Q
    |||||||||||||||||||||||| || ||||||||||    
T  4 gataattaaggtaagggggttagtgttcatcataatca 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 3936 - 3863
Alignment:
Q  178 tgcatgaattgatgttagttgtataattgtttgtgaaattacatgttcatatatg-caaaaatgataagttatg 250  Q
    |||||||||||||| || |||||| |||||| ||||||||||||||||| |||||  |||||||||||||||||    
T  3936 tgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaaatgataagttatg 3863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 1363 - 1436
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 86  Q
    ||||| ||||||||||||| ||||||| | |||| ||||||| |||||||||||||||  || |||||||||||    
T  1363 taggaactaaagtgaagcttgagctaggaattggtgataattgaggtaagggggttagaattcatcataatcat 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 35873 - 35816
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  35873 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 35816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 499 - 442
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| ||||||| | |||| ||||| | |||||||||||||||    
T  499 taggagctaaagtgaagcttgagctaggaattggtgataactgaggtaagggggttag 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 56106 - 56195
Alignment:
Q  135 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgttagttgtataattgtttgtgaaattacatgtt 224  Q
    ||||||| ||||||||||||| |||| || |||||| || || ||||||| |||||| || |||||| |||||   ||||||||||||||    
T  56106 attgttgttaaattcgtgctctaactgtgatgttattttcgtgtgcatgatttgatgataattgtatgattgtggctgaaattacatgtt 56195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 76699 - 76756
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | |||  |||||||||||||||||||||||    
T  76699 taggagctaaagtgaagcttgggctaggaattgctgataattaaggtaagggggttag 76756  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 193396 - 193429
Alignment:
Q  53 ttaaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||||||||||||||||    
T  193396 ttaaggtaagggggttagtctttatcataatcat 193429  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 6443 - 6475
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  6443 taaggtaagggggttagtctttatcataatcat 6475  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 878 - 910
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  878 taaggtaagggggttagtctttatcataatcat 910  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 9882 - 9914
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  9882 taaggtaagggggttagtctttatcataatcat 9914  T

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Target: scaffold0251 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 13285 - 13317
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  13285 taaggtaagggggttagtctttatcataatcat 13317  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 57392 - 57424
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  57392 taaggtaagggggttagtctttatcataatcat 57424  T

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Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 70307 - 70348
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||| ||||||||||| || ||||||||||||||||||    
T  70307 aaattcgtactccaactatgatgatatgtttgtatgcatgaa 70348  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 55936 - 55904
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  55936 taaggtaagggggttagtctttatcataatcat 55904  T

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Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 108075 - 108107
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||||||||||||||||||    
T  108075 taaggtaagggggttagtctttatcataatcat 108107  T

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Target: scaffold0207 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 18058 - 18015
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcatcatcattttgt 97  Q
    ||||||||||||||||||||| ||||||||||| || |||||||    
T  18058 taaggtaagggggttagtcttcatcataatcataattattttgt 18015  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 8257 - 8174
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatg-aattgatgttagttgtataattgtttgtgaaattacatgttca 226  Q
    |||||||||||| ||||||| || |||||||||||||||| |||||||| || ||| ||  ||||| ||||| || ||||||||    
T  8257 aaattcgtgctctaactatgatgatatgtttgtatgcatgaaattgatgataattgaattgttgttggtgaatttgcatgttca 8174  T

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Target: scaffold0243 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 2317 - 2399
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa-ttgatgttagttgtataattgtttgtgaaattacatgttca 226  Q
    |||||||||||||| |||| ||||||||||| ||||||||| ||| || || ||| ||  ||||| |||||||| ||||||||    
T  2317 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 2399  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 689 - 632
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | |||||||| ||||||||||||||    
T  689 taggagctaaagtgaagcttgggctaggaattagtgataattatggtaagggggttag 632  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 7056 - 6999
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||| | | ||||| | |||| |||||||| ||||||||||||||    
T  7056 taggagctaaagtgaaggttgggctaggaattggtgataattatggtaagggggttag 6999  T

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Target: scaffold0456 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 1546 - 1587
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  1546 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 1587  T

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Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 8691 - 8732
Alignment:
Q  144 aaattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  8691 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 8732  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 43651 - 43708
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  43651 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 43708  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 31414 - 31357
Alignment:
Q  13 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 70  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  31414 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 31357  T

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Target: scaffold0589 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 8051 - 8011
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  8051 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 8011  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 17209 - 17241
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  17209 taaggtaagggggttagtcttcatcataatcat 17241  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 5476 - 5508
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  5476 taaggtaagggggttagtcttcatcataatcat 5508  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 4346 - 4378
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||| |||||||||||||||    
T  4346 taaggtaagggggttagactttatcataatcat 4378  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 17304 - 17336
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||| |||||||||||||||||||||||    
T  17304 taaggtaagcgggttagtctttatcataatcat 17336  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 5581 - 5549
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  5581 taaggtaagggggttagtcttcatcataatcat 5549  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 34308 - 34340
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  34308 taaggtaagggggttagtcttcatcataatcat 34340  T

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Target: scaffold0092 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 3565 - 3525
Alignment:
Q  145 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 185  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  3565 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 3525  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 45370 - 45338
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  45370 taaggtaagggggttagtcttcatcataatcat 45338  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 12418 - 12450
Alignment:
Q  54 taaggtaagggggttagtctttatcataatcat 86  Q
    |||||||||||||||||| ||||||||||||||    
T  12418 taaggtaagggggttagtttttatcataatcat 12450  T

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