View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12891_high_21 (Length: 439)

Name: NF12891_high_21
Description: NF12891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12891_high_21
NF12891_high_21
[»] chr2 (20 HSPs)
chr2 (18-416)||(12904559-12904957)
chr2 (70-221)||(11992594-11992745)
chr2 (159-249)||(7292720-7292810)
chr2 (83-221)||(4807248-4807386)
chr2 (83-221)||(452110-452248)
chr2 (83-221)||(45368112-45368249)
chr2 (83-223)||(2610184-2610324)
chr2 (83-248)||(13148969-13149134)
chr2 (83-153)||(24584162-24584232)
chr2 (320-408)||(23714561-23714649)
chr2 (320-408)||(24102233-24102321)
chr2 (83-234)||(33594744-33594895)
chr2 (83-144)||(30743279-30743340)
chr2 (83-123)||(14769946-14769986)
chr2 (94-221)||(3244139-3244266)
chr2 (83-198)||(41763560-41763675)
chr2 (83-123)||(876788-876828)
chr2 (83-123)||(8180436-8180476)
chr2 (192-248)||(9460393-9460449)
chr2 (83-123)||(38453206-38453246)
[»] chr4 (17 HSPs)
chr4 (43-235)||(10775896-10776085)
chr4 (83-234)||(30807254-30807402)
chr4 (83-199)||(50286627-50286743)
chr4 (83-221)||(23906789-23906927)
chr4 (83-221)||(33226865-33227003)
chr4 (83-221)||(48174581-48174719)
chr4 (87-238)||(42037521-42037677)
chr4 (83-221)||(27450661-27450799)
chr4 (68-234)||(39754846-39755012)
chr4 (83-221)||(56374946-56375084)
chr4 (83-228)||(1211871-1212016)
chr4 (182-237)||(15183614-15183669)
chr4 (83-221)||(435885-436023)
chr4 (87-221)||(53707454-53707588)
chr4 (83-199)||(31960324-31960440)
chr4 (83-221)||(48623015-48623153)
chr4 (352-397)||(30853339-30853384)
[»] chr8 (17 HSPs)
chr8 (20-237)||(25985134-25985350)
chr8 (83-221)||(36565729-36565867)
chr8 (70-123)||(18849701-18849754)
chr8 (84-221)||(42854492-42854629)
chr8 (83-221)||(4032982-4033120)
chr8 (83-221)||(12492330-12492468)
chr8 (27-123)||(41444890-41444987)
chr8 (83-142)||(15215837-15215896)
chr8 (83-221)||(36544808-36544946)
chr8 (162-206)||(30748232-30748276)
chr8 (83-123)||(43732230-43732270)
chr8 (83-123)||(45332073-45332113)
chr8 (89-123)||(8880020-8880054)
chr8 (159-237)||(42493774-42493852)
chr8 (200-237)||(16351162-16351199)
chr8 (159-228)||(38328288-38328357)
chr8 (347-416)||(39051060-39051129)
[»] chr1 (21 HSPs)
chr1 (43-234)||(28528197-28528388)
chr1 (56-208)||(6640755-6640907)
chr1 (83-221)||(51601714-51601852)
chr1 (83-216)||(7921583-7921716)
chr1 (83-199)||(27445554-27445670)
chr1 (83-235)||(51234271-51234422)
chr1 (83-199)||(1210401-1210517)
chr1 (83-221)||(43240869-43241007)
chr1 (27-123)||(40419280-40419377)
chr1 (85-237)||(34827574-34827726)
chr1 (194-237)||(18793460-18793503)
chr1 (83-221)||(49347881-49348020)
chr1 (193-237)||(26016231-26016275)
chr1 (83-219)||(32083235-32083371)
chr1 (69-123)||(3877491-3877545)
chr1 (83-221)||(8671576-8671714)
chr1 (83-221)||(51441252-51441390)
chr1 (83-199)||(19936177-19936294)
chr1 (83-196)||(37463378-37463491)
chr1 (70-144)||(32066836-32066907)
chr1 (316-392)||(52442823-52442899)
[»] chr7 (21 HSPs)
chr7 (41-237)||(43793515-43793708)
chr7 (83-221)||(38606661-38606799)
chr7 (83-221)||(46356339-46356477)
chr7 (83-221)||(33350294-33350432)
chr7 (87-221)||(11593620-11593754)
chr7 (83-221)||(36651650-36651788)
chr7 (83-221)||(31004880-31005017)
chr7 (83-153)||(32630263-32630333)
chr7 (84-221)||(37616573-37616710)
chr7 (83-237)||(18637236-18637387)
chr7 (83-237)||(18650671-18650822)
chr7 (320-385)||(36514531-36514596)
chr7 (161-249)||(12965677-12965764)
chr7 (83-123)||(18608276-18608316)
chr7 (83-123)||(18626562-18626602)
chr7 (43-123)||(20499711-20499791)
chr7 (83-123)||(39906965-39907005)
chr7 (83-195)||(49028923-49029035)
chr7 (83-170)||(24177734-24177821)
chr7 (94-220)||(24550178-24550304)
chr7 (85-221)||(48919046-48919182)
[»] chr3 (22 HSPs)
chr3 (83-221)||(25191035-25191173)
chr3 (83-221)||(38849750-38849888)
chr3 (43-199)||(44395046-44395199)
chr3 (83-228)||(27917228-27917373)
chr3 (43-123)||(1448199-1448279)
chr3 (49-245)||(46145775-46145971)
chr3 (102-249)||(11581119-11581266)
chr3 (83-221)||(28245093-28245231)
chr3 (83-221)||(47542199-47542337)
chr3 (83-221)||(51448197-51448335)
chr3 (165-249)||(50632288-50632372)
chr3 (83-146)||(19757724-19757787)
chr3 (162-248)||(50632442-50632528)
chr3 (321-390)||(49841503-49841572)
chr3 (83-203)||(29817161-29817280)
chr3 (167-223)||(30345267-30345323)
chr3 (83-123)||(52138484-52138524)
chr3 (159-237)||(805634-805712)
chr3 (89-123)||(9258541-9258575)
chr3 (164-213)||(24302013-24302062)
chr3 (188-244)||(1448078-1448134)
chr3 (83-123)||(19736822-19736862)
[»] chr5 (20 HSPs)
chr5 (20-221)||(3394303-3394504)
chr5 (73-221)||(12492875-12493023)
chr5 (86-237)||(21915545-21915696)
chr5 (83-221)||(3301505-3301643)
chr5 (83-221)||(16347891-16348028)
chr5 (83-221)||(1288077-1288215)
chr5 (83-221)||(2075962-2076100)
chr5 (83-221)||(20318647-20318785)
chr5 (83-199)||(1274921-1275037)
chr5 (83-221)||(10638953-10639091)
chr5 (164-237)||(15370739-15370812)
chr5 (42-123)||(43558400-43558481)
chr5 (43-143)||(6368491-6368591)
chr5 (70-221)||(28977345-28977496)
chr5 (83-221)||(24178180-24178318)
chr5 (320-385)||(16134505-16134570)
chr5 (83-237)||(38578976-38579127)
chr5 (321-400)||(27998315-27998394)
chr5 (26-153)||(17341757-17341885)
chr5 (83-143)||(27302513-27302573)
[»] chr6 (11 HSPs)
chr6 (83-221)||(9706432-9706570)
chr6 (86-221)||(5631476-5631612)
chr6 (83-221)||(5258638-5258776)
chr6 (129-227)||(7079836-7079934)
chr6 (83-221)||(20428124-20428262)
chr6 (83-144)||(10100422-10100483)
chr6 (84-143)||(2689313-2689372)
chr6 (131-205)||(6641914-6641988)
chr6 (55-145)||(8811940-8812030)
chr6 (140-228)||(19338459-19338547)
chr6 (325-385)||(20834380-20834440)
[»] scaffold0606 (1 HSPs)
scaffold0606 (43-123)||(9273-9353)
[»] scaffold0024 (1 HSPs)
scaffold0024 (83-195)||(82377-82489)
[»] scaffold0570 (1 HSPs)
scaffold0570 (83-221)||(2758-2896)
[»] scaffold0113 (1 HSPs)
scaffold0113 (83-153)||(12154-12224)
[»] scaffold0171 (1 HSPs)
scaffold0171 (83-123)||(5848-5888)
[»] scaffold0896 (1 HSPs)
scaffold0896 (55-145)||(4386-4476)
[»] scaffold0018 (1 HSPs)
scaffold0018 (83-221)||(31124-31262)


Alignment Details
Target: chr2 (Bit Score: 338; Significance: 0; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 18 - 416
Target Start/End: Original strand, 12904559 - 12904957
Alignment:
Q  18 ataagacggagtatatagaatttaatttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggttt 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12904559 ataagacggagtatatagaatgtaatttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggttt 12904658  T
Q  118 aaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  12904659 aaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaataaacgagtgtctcaggtg 12904758  T
Q  218 ttttatatgatgcgaaagtattactcaagttggaagaannnnnnnatcggacagaggtaagaccaacaatgttgtacgagagacagagtattgggagata 317  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  12904759 ttttatatgatgcgaaagtattactcaagttggaagaatttttttatcggacagaggtaagaccaacaatgttgtacgagggacagagtgttgggagata 12904858  T
Q  318 atgaaccaacacgaaaatagattaagtataacatagatgatgatattgtgttggatgtatggtaagacgagacaatatagaatgaaaaatgtcaatatt 416  Q
    |||||||||||||||||||||||||||||| |||| || | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12904859 atgaaccaacacgaaaatagattaagtatagcataaataaggatattgtgttggatgtatggtaagacgagacaatatagaattaaaaatgtcaatatt 12904957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 70 - 221
Target Start/End: Complemental strand, 11992745 - 11992594
Alignment:
Q  70 ttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaa 169  Q
    ||||||||  || ||||||||||||||||| | ||||||||||||||||||||| | | |||||||||||||||| |||||||| | | || ||||||||    
T  11992745 ttagaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtctatagtacaaaatgatggagaaatagaagcagatgtaa 11992646  T
Q  170 accatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    | ||| | ||||||| | |||||||||||| ||| || | ||||||||||||    
T  11992645 atcatcgtattcaagctgggtggttgaaatggagaagagcctcaggtgtttt 11992594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 7292720 - 7292810
Alignment:
Q  159 aggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagtattactcaagttg 249  Q
    ||||||||||||||||  ||| |||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||| | |||||||||    
T  7292720 aggagatgtaaaccatcaaatccaagttgggtggttgaaatgaaggagtgactcaggtgttttatatgatgcgaaagtactgctcaagttg 7292810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 4807248 - 4807386
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | |||||||||| |||||||||| | | |||| | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  4807248 ttggagatcatatcataccccaagttacacagtttaaatatcttgggtctttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 4807347  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || ||||||||||||||    
T  4807348 agatgggtggttgaaatggagaagagtctcaggtgtttt 4807386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 452248 - 452110
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  452248 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 452149  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  452148 agctgggtggttgaaatggagaagagcctcaggtgtttt 452110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 45368249 - 45368112
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||| ||||||||||||||||| | | ||| ||| |||||||| |||||||| | | || |||||||||  || | |||||    
T  45368249 ttggagatcatatcatacc-caaattacacggtttaaatatcttgggtccataatacaaaatgatggagaaatagaagcagatgtaaattatcgtattca 45368151  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || ||||||||||||||    
T  45368150 agctgggtggttgaaatggagaagagtctcaggtgtttt 45368112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 223
Target Start/End: Original strand, 2610184 - 2610324
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| |  ||||| | | || |||||||||||||   |||||    
T  2610184 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacagagaaatagaagcagatgtaaaccatcatattca 2610283  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttat 223  Q
    || | |||||||||||| ||| || | ||||||||||||||    
T  2610284 agctgggtggttgaaatggagaagagcctcaggtgttttat 2610324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 248
Target Start/End: Original strand, 13148969 - 13149134
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| |   ||| |||||||||||| | |||||| | | || ||||  ||| ||| | |||||    
T  13148969 ttggagatcatatcataccccaagttacacggtttaaatatctcaggtccatagtacaaaatgacggagaaatagaagtagatacaaatcatcgtattca 13149068  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagtattactcaagtt 248  Q
    |||| | ||||||||||  || || |  |||||||||| |||||||  |||||||  |||||||||    
T  13149069 agttggatggttgaaatgaagaagagcttcaggtgtttcatatgataagaaagtaccactcaagtt 13149134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 24584232 - 24584162
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaa 153  Q
    ||||||||||||||| | | ||||||||||||||||||||| | | ||| |||||||||||| ||||||||    
T  24584232 ttggagatcatatcagaccgcaagttacacggtttaaatatcttgggtccatagtacaaaatgatggagaa 24584162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 23714649 - 23714561
Alignment:
Q  320 gaaccaacacgaaaatagattaagtataacatagatgatgatattgtgttggatgtatggtaagacgagacaatatagaatgaaaaatg 408  Q
    ||||||||||||||||| |||||| ||| || |||| |  || ||||||||||||| ||||||||| |||||| |||| || |||||||    
T  23714649 gaaccaacacgaaaataaattaagcatagcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatg 23714561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 24102321 - 24102233
Alignment:
Q  320 gaaccaacacgaaaatagattaagtataacatagatgatgatattgtgttggatgtatggtaagacgagacaatatagaatgaaaaatg 408  Q
    ||||||||||||||||| |||||| ||| || |||| |  || ||||||||||||| ||||||||| |||||| |||| || |||||||    
T  24102321 gaaccaacacgaaaataaattaagcatagcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatg 24102233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 33594895 - 33594744
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    |||||| |||||||||| ||  | |||||| |||||||||| |   || ||||||||||||    |||||| | | |||||||||||| |||  ||||||    
T  33594895 ttggagttcatatcataccagcatttacacagtttaaatatcttaggtatatagtacaaaacgtcggagaaatagaaggagatgtaaaacatcaaattca 33594796  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaa 234  Q
    |  | ||||||||| || ||||||||||| ||||||||||  ||||||||||    
T  33594795 aactgggtggttgagatggaggagtgtcttaggtgttttaagtgatgcgaaa 33594744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 30743279 - 30743340
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaat 144  Q
    |||||||||||| |||||| ||||||||||||||||||||| |   ||| ||||||||||||    
T  30743279 ttggagatcataccatatcccaagttacacggtttaaatatcttaggtcaatagtacaaaat 30743340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 14769946 - 14769986
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  14769946 ttggagatcatatcatagcataagttacacggtttaaatat 14769986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 3244266 - 3244139
Alignment:
Q  94 atcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggt 193  Q
    |||||||| ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | ||||||| | ||||||    
T  3244266 atcatatcccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattcaagctgggtggt 3244167  T
Q  194 tgaaatagaggagtgtctcaggtgtttt 221  Q
     ||||| |||  | | ||||||||||||    
T  3244166 agaaatggagatgagcctcaggtgtttt 3244139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 41763675 - 41763560
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    |||||||| |||||||| | |||||| |||| ||||||||| | | ||| ||||||||||||   |||||| | | || ||||||||| ||| | |||||    
T  41763675 ttggagattatatcataccccaagttgcacgatttaaatatcttgggtccatagtacaaaatgtcggagaaatagaagcagatgtaaatcatcgtattca 41763576  T
Q  183 agttaggtggttgaaa 198  Q
    || | |||||||||||    
T  41763575 agctgggtggttgaaa 41763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 876788 - 876828
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  876788 ttggagatcatatcctaccacaagttacacagtttaaatat 876828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 8180436 - 8180476
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    |||||||||||||||||   |||||||||||||||||||||    
T  8180436 ttggagatcatatcatactccaagttacacggtttaaatat 8180476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 9460393 - 9460449
Alignment:
Q  192 gttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagtattactcaagtt 248  Q
    |||||||| |||||| |||||| || ||||||||||| | ||||||| |||||||||    
T  9460393 gttgaaatggaggagggtctcatgttttttatatgatacaaaagtatcactcaagtt 9460449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 38453246 - 38453206
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||||||| | ||||||||||| |||||||||    
T  38453246 ttggagatcatatcataccccaagttacacgatttaaatat 38453206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 43 - 235
Target Start/End: Complemental strand, 10776085 - 10775896
Alignment:
Q  43 tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaa 142  Q
    ||||||||||||||||| ||||||||||||||||   || ||||||||||||||||| ||||||||||| ||||||||||| | | ||||||| ||||||    
T  10776085 tttagcaaaaggcgaaatgtttctagtttagaggggaaagttggagatcatatcataccacaagttacatggtttaaatatcttgggtctataatacaaa 10775986  T
Q  143 ataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaag 235  Q
    || |||||||||||     ||||||||||||||||||||||  | |||||||||||| |||||||| || |  |||||||| |||||||||||    
T  10775985 atgatggagaagtt---taagatgtaaaccatagaattcaaaatgggtggttgaaatggaggagtgccttacttgttttatgtgatgcgaaag 10775896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 30807254 - 30807402
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||| |  ||||| |   || |||||||||||||| |||  |    
T  30807254 ttggagatcatatcataccacaagttacacggtttaaatgtttggagtctatagtacaaaatgactgagaaat---agaagatgtaaaccataaaatcaa 30807350  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaa 234  Q
    |||| | || ||||||| ||||||||||| ||||||||||| ||||| ||||    
T  30807351 agttggttgtttgaaatggaggagtgtcttaggtgttttatgtgatgtgaaa 30807402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 50286627 - 50286743
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  50286627 ttggagatcatatcataccccaagttacacggtttaaatatattgtgtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 50286726  T
Q  183 agttaggtggttgaaat 199  Q
    || | ||||||||||||    
T  50286727 agctgggtggttgaaat 50286743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 23906927 - 23906789
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  23906927 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 23906828  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  23906827 agctgggtggttgaaatggagaagagcctcaggtgtttt 23906789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 33226865 - 33227003
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| ||||   |||||    
T  33226865 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcatattca 33226964  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || ||||||||||||||    
T  33226965 agctgggtggttgaaatggagaagagtctcaggtgtttt 33227003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 48174719 - 48174581
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||| | | |||||| | | || |||||||| |||| | |||||    
T  48174719 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaagtgacggagaaatagaagcagatgtaagccatcgtattca 48174620  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || |||||||||||||| ||| || | ||||||||||||    
T  48174619 agctaggtggttgaaatggagaagagcctcaggtgtttt 48174581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 42037521 - 42037677
Alignment:
Q  87 agatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca---- 182  Q
    ||||||||||||  ||||||||||||||||||||||| | |  ||||||||||||||| |  ||||| |   |||||||||||||||  |||| ||        
T  42037521 agatcatatcatcccacaagttacacggtttaaatatcttgaatctatagtacaaaatgactgagaaatataaggagatgtaaaccactgaatccaagct 42037620  T
Q  183 agttaggtggttgaaa-tagaggagtgtctcaggtgttttatatgatgcgaaagtat 238  Q
    || ||| ||||||||| | |||||||| |||||||||||||| ||||| ||||||||    
T  42037621 agctagatggttgaaattggaggagtgcctcaggtgttttatgtgatgtgaaagtat 42037677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 27450799 - 27450661
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | |||||||||| ||||| |||| | | ||| ||||| |||||| |||||||| | | || ||||||||| ||| | |||||    
T  27450799 ttggagatcatatcataccccaagttacacagtttacatatcttgggtccatagtgcaaaatgatggagaaatagaagcagatgtaaatcatcgtattca 27450700  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | |||| |||||||    
T  27450699 agctgggtggttgaaatggagaagagcctcaagtgtttt 27450661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 234
Target Start/End: Complemental strand, 39755012 - 39754846
Alignment:
Q  68 gtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat-atggtgtctatagtacaaaataatggagaagttggaggagatg 166  Q
    ||||||||||  || ||| ||||||||||||| ||||||| ||||  ||||||||| |||| |||||||||||||||  |   |||| | | ||||||||    
T  39755012 gtttagaggtgaaagttgaagatcatatcataccacaagtcacacactttaaatatcatgg-gtctatagtacaaaacgacaaagaaatagaaggagatg 39754914  T
Q  167 taaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaa 234  Q
    |||| ||| |||| ||||||  |||||||||||  |  |||| |||| ||||||||| ||||||||||    
T  39754913 taaatcattgaatccaagtttagtggttgaaatgaaccagtgcctcaagtgttttatgtgatgcgaaa 39754846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 56374946 - 56375084
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||| ||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||| ||| |||| | |||||    
T  56374946 ttggagagcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatataagccatcgtattca 56375045  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  56375046 agctgggtggttgaaattgagaagagcctcaggtgtttt 56375084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 1212016 - 1211871
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| |  | ||||||  |||||||||| | ||||| ||||||||||||||  ||||| | | || || |||||| ||| | |||||    
T  1212016 ttggagatcatatcataccttacgttacatagtttaaatatcttgtgtccatagtacaaaataacagagaaatagaagcaggtgtaaatcatcgtattca 1211917  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttatatgat 228  Q
    |||||||| |||||||| ||| || | ||||  |||||| ||||||    
T  1211916 agttaggtagttgaaatggagaagagcctcaaatgttttgtatgat 1211871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 15183614 - 15183669
Alignment:
Q  182 aagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    ||||| ||||||||| || ||||||||||||| ||||||||| |||||||||||||    
T  15183614 aagttgggtggttgagatggaggagtgtctcaagtgttttatgtgatgcgaaagta 15183669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 435885 - 436023
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||| ||||| | |||||| | | || ||||||||  ||| | |||||    
T  435885 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtataaaatgacggagaaatagaagcagatgtaagtcatcgtattca 435984  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || |  ||||||||||| ||| || | ||||||||||||    
T  435985 agctgagtggttgaaatggagaagagcctcaggtgtttt 436023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 221
Target Start/End: Original strand, 53707454 - 53707588
Alignment:
Q  87 agatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagtt 186  Q
    ||||||||||||| | ||||||||||||| ||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | ||||||| |    
T  53707454 agatcatatcataccccaagttacacggtctaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattcaagct 53707553  T
Q  187 aggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
     |||||||||||| ||| || | ||||| ||||||    
T  53707554 gggtggttgaaatggagaagagactcagatgtttt 53707588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 31960440 - 31960324
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||| ||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| ||||   |||||    
T  31960440 ttggagatcatatcataccccaatttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcatattca 31960341  T
Q  183 agttaggtggttgaaat 199  Q
    || | ||||||||||||    
T  31960340 agctgggtggttgaaat 31960324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 48623153 - 48623015
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||| ||||||||| | ||| ||||||| ||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  48623153 ttggagagcatatcataccccaaattacacgatttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 48623054  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| |  | ||||||||||||    
T  48623053 agctgggtggttgaaatggagaaaagcctcaggtgtttt 48623015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 30853339 - 30853384
Alignment:
Q  352 agatgatgatattgtgttggatgtatggtaagacgagacaatatag 397  Q
    |||||| ||| ||||||||||||||||||||||| |||||| ||||    
T  30853339 agatgaagatgttgtgttggatgtatggtaagactagacaagatag 30853384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 9e-40; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 25985134 - 25985350
Alignment:
Q  20 aagacggagtatatagaatttaa-tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggttta 118  Q
    ||||| |||||||| |||| ||| |||||||| ||||||| | ||||||| ||||||||  || |||||  |||||||||| ||||||||||||||||||    
T  25985134 aagacagagtatatggaatgtaagtttagcaagaggcgaagcatttctagcttagaggtgaaagttgga--tcatatcataccacaagttacacggttta 25985231  T
Q  119 aatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgt 218  Q
    ||||||| |  ||||||||||||||  |||||||| | | |||||||||||||||| |||| |||  | ||| |||||||| |||||||| |||| ||||    
T  25985232 aatatattggatctatagtacaaaaatatggagaaatagaaggagatgtaaaccattgaatccaaaatgggtagttgaaatggaggagtgcctcaagtgt 25985331  T
Q  219 tttatatgatgcgaaagta 237  Q
    ||||||||||||| |||||    
T  25985332 tttatatgatgcggaagta 25985350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 36565867 - 36565729
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  36565867 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtcctttgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 36565768  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  36565767 agctgggtggttgaaatggagaagagcctcaggtgtttt 36565729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 18849754 - 18849701
Alignment:
Q  70 ttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  18849754 ttagaggtaaaaattggagatcatatcataccccaagttacacggtttaaatat 18849701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 42854629 - 42854492
Alignment:
Q  84 tggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaa 183  Q
    |||||||||||||||| | ||||||||||||||||||||| | | ||| || |||||||||  | ||||| | | || ||||||||| ||| | ||||||    
T  42854629 tggagatcatatcataccccaagttacacggtttaaatatcttgggtccatcgtacaaaatgtttgagaaatagaagcagatgtaaatcatcgtattcaa 42854530  T
Q  184 gttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    | | |||||||||||| ||| || | |||| |||||||    
T  42854529 gctgggtggttgaaatggagaagagcctcatgtgtttt 42854492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 4033120 - 4032982
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||| ||| | | ||  |||||||| ||| |||||||| |   || | ||||||| |||   |||||    
T  4033120 ttggagatcatatcataccccaagttacacggtttaagtatcttgggttcatagtacacaatgatggagaaataaaagcatatgtaaatcatcatattca 4033021  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    |||| |||||||||||| ||| || | ||||||||||||    
T  4033020 agttgggtggttgaaatggagaagagcctcaggtgtttt 4032982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 12492468 - 12492330
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| | || | |||||    
T  12492468 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagctatcgtattca 12492369  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
     ||| |||||||||||| ||| || | |||| |||||||    
T  12492368 ggttgggtggttgaaatggagaagagcctcatgtgtttt 12492330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 41444987 - 41444890
Alignment:
Q  27 agtatatagaatttaattt-agcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||| |||| |||||| ||||||||||||| | ||||||  ||||||||  ||  |||||||||||||||| ||||||||||  |||||||||||    
T  41444987 agtatatggaatgtaattttagcaaaaggcgaagcatttctaacttagaggtgaaaggtggagatcatatcataccacaagttacttggtttaaatat 41444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 15215896 - 15215837
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaa 142  Q
    ||||||||||||||||| |  |||||||||||||||||||||| | ||| ||||||||||    
T  15215896 ttggagatcatatcatacccaaagttacacggtttaaatatattgggtccatagtacaaa 15215837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 36544808 - 36544946
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat-atggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattc 181  Q
    ||||||||||||||||| | ||||||||| ||||||||||| |||| | || | ||||||||| | |||||| | | || ||||||||  ||| | ||||    
T  36544808 ttggagatcatatcataccccaagttacaaggtttaaatatcatgg-ggctttcgtacaaaatgacggagaaatagaagcagatgtaagtcatcgtattc 36544906  T
Q  182 aagttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    ||||| |||||||||||| ||  || | ||||||||||||    
T  36544907 aagttgggtggttgaaatggataagagcctcaggtgtttt 36544946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 30748232 - 30748276
Alignment:
Q  162 agatgtaaaccatagaattcaagttaggtggttgaaatagaggag 206  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||    
T  30748232 agatgtaaaccatcgaattcaagctaggtggttgaaatggaggag 30748276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 43732270 - 43732230
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  43732270 ttggagatcatatcatagcacaagtaacacggtttaaatat 43732230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 45332113 - 45332073
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  45332113 ttggagatcatgtcataccacaagttacacggtttaaatat 45332073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 123
Target Start/End: Complemental strand, 8880054 - 8880020
Alignment:
Q  89 atcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||| |||||||||||||||||||||    
T  8880054 atcatatcatatcccaagttacacggtttaaatat 8880020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 42493852 - 42493774
Alignment:
Q  159 aggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    |||||||||||||||| ||||| ||| | ||||||| ||||||||||  | |||| ||||||||| |||  ||||||||    
T  42493852 aggagatgtaaaccatggaatttaagctgggtggttaaaatagaggaaggcctcatgtgttttatgtgacacgaaagta 42493774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 16351162 - 16351199
Alignment:
Q  200 agaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  16351162 agaggagtgtctcaggtgttttatgtgatgtgaaagta 16351199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 38328357 - 38328288
Alignment:
Q  159 aggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgat 228  Q
    |||||||||||| ||| ||||  ||||| ||| ||||||||  |||||||||| ||||||||||| ||||    
T  38328357 aggagatgtaaatcattgaatctaagttgggtagttgaaatgaaggagtgtcttaggtgttttatgtgat 38328288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 39051060 - 39051129
Alignment:
Q  347 aacatagatgatgatattgtgttggatgtatggtaagacgagacaatatagaatgaaaaatgtcaatatt 416  Q
    ||||||||||| ||| ||||||| ||||| ||||||||| |||||  ||||||| | ||||| |||||||    
T  39051060 aacatagatgaggatgttgtgttagatgtgtggtaagacaagacatgatagaattagaaatgacaatatt 39051129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 28528197 - 28528388
Alignment:
Q  43 tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaa 142  Q
    |||||||| ||||||| |||||||||  |||||||  || |||||||||||| |||| |||||||||||| |||||||||| | | ||||||  ||||||    
T  28528197 tttagcaagaggcgaagcgtttctagcctagaggtgaaagttggagatcatagcataccacaagttacacagtttaaatatcttgggtctatgttacaaa 28528296  T
Q  143 ataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaa 234  Q
    | ||||||||| | | ||||| |||||||||| |||| | || | |||||||||||| |||||||| |||||||||||||| ||||||||||    
T  28528297 acaatggagaaatagaaggaggtgtaaaccatcgaatccgagctgggtggttgaaattgaggagtgcctcaggtgttttatgtgatgcgaaa 28528388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 208
Target Start/End: Original strand, 6640755 - 6640907
Alignment:
Q  56 gaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagt 155  Q
    |||||||||||||| |||||||  || || |||||||||| | | ||||||||||||||||||||||| | | |||||||||||||||| |||||||| |    
T  6640755 gaaacgtttctagtgtagaggtgaaagttagagatcatattacaccacaagttacacggtttaaatatcttgagtctatagtacaaaattatggagaaat 6640854  T
Q  156 tggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtg 208  Q
     | ||||| |||||||||| | || |||||| |||||||||||||||||||||    
T  6640855 agaaggaggtgtaaaccattggatccaagttgggtggttgaaatagaggagtg 6640907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 51601714 - 51601852
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  51601714 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 51601813  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||| ||||||||| || ||||||||||||||    
T  51601814 agctgggtggtggaaatagagaagagtctcaggtgtttt 51601852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 7921583 - 7921716
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    |||||||||||||| || ||||||||||||| |||| |||| | |  || |||||||||||  || ||||| | | |||||||||||||||| |||||||    
T  7921583 ttggagatcatatcttaccacaagttacacgatttatatatcttggatccatagtacaaaacgattgagaaatagaaggagatgtaaaccatcgaattca 7921682  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggt 216  Q
    |||| ||| |||||||| || ||| |||||||||    
T  7921683 agttgggttgttgaaatggatgagggtctcaggt 7921716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 27445554 - 27445670
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||| ||||||| | ||||||||||||||||| ||| | | ||| |||||||||||| |||||||| | | || ||||||||| ||| | |||||    
T  27445554 ttggagatcttatcataccccaagttacacggtttaattatgttgggtccatagtacaaaatgatggagaaatagaagcagatgtaaatcatcgtattca 27445653  T
Q  183 agttaggtggttgaaat 199  Q
    |||| | ||||||||||    
T  27445654 agttggttggttgaaat 27445670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 235
Target Start/End: Original strand, 51234271 - 51234422
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    |||||||||||||||||  ||||||| ||  |||||||||| | | ||| ||||| |||||| |||||||| ||| || ||||||||| |||  ||||||    
T  51234271 ttggagatcatatcataa-acaagtttcatagtttaaatatcttgagtccatagtgcaaaatgatggagaaattgaagcagatgtaaatcatcaaattca 51234369  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaag 235  Q
    |||| |||||||||||| ||| |  | ||||||| |||||| |||| ||||||    
T  51234370 agttgggtggttgaaatggagaatagcctcaggtcttttatgtgatacgaaag 51234422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 1210401 - 1210517
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | |||||||||| |||||||||| | | |||| | ||||||||| |||||||| |   || |||||||| |||| | |||||    
T  1210401 ttggagatcatatcataccccaagttacacagtttaaatatcttgggtctttcgtacaaaatgatggagaaataaaagcagatgtaagccatcgtattca 1210500  T
Q  183 agttaggtggttgaaat 199  Q
    || | ||||||||||||    
T  1210501 agctgggtggttgaaat 1210517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 43241007 - 43240869
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | |  ||  | ||||||||| | |||||| | | || |||||||| ||||   |||||    
T  43241007 ttggagatcatatcataccccaagttacacggtttaaatatcttggatccttcgtacaaaatgacggagaaatggaagcagatgtaagccatcatattca 43240908  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  43240907 agctgggtggttgaaatggagaagagcctcaggtgtttt 43240869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 40419280 - 40419377
Alignment:
Q  27 agtatatagaatttaattt-agcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||| |||| |||||| |||||||||| || | |||||||  || ||||  || ||||||||||||||||| |||||||||||| ||||||||||    
T  40419280 agtatatggaatgtaattttagcaaaaggcaaagcatttctagcgtaaaggtgaaagttggagatcatatcataccacaagttacacagtttaaatat 40419377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 237
Target Start/End: Complemental strand, 34827726 - 34827574
Alignment:
Q  85 ggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaag 184  Q
    ||||||||||||||| |  |||||||| ||||||||||| | | ||| |||||||||||| | |||||| | | || | ||||||| ||| | |||||||    
T  34827726 ggagatcatatcataccctaagttacaaggtttaaatatcttgggtccatagtacaaaatgacggagaaatagaagcatatgtaaatcattgtattcaag 34827627  T
Q  185 ttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    ||   |||||||||| ||| || | |||| ||||||||| ||||  |||||||    
T  34827626 ttgaatggttgaaatggagaagagcctcatgtgttttatgtgataagaaagta 34827574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 18793503 - 18793460
Alignment:
Q  194 tgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    |||||| ||||||||||||||||||||||| |||||||||||||    
T  18793503 tgaaatggaggagtgtctcaggtgttttatgtgatgcgaaagta 18793460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 49348020 - 49347881
Alignment:
Q  83 ttggagatcatatcatatcacaagttacac-ggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattc 181  Q
    ||||||||||||||||| | |||||||||| ||||||||||| | | |||  | ||||||||| | |||||| | | || || ||||| |||| | ||||    
T  49348020 ttggagatcatatcataccccaagttacactggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcaggtgtaagccatcgtattc 49347921  T
Q  182 aagttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    ||| | |||||||||||| ||| || | ||||||||||||    
T  49347920 aagctgggtggttgaaatggagaagagcctcaggtgtttt 49347881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 26016231 - 26016275
Alignment:
Q  193 ttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||    
T  26016231 ttgaaatggaggagtgtctcaggtgttttatgtgatgctaaagta 26016275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 219
Target Start/End: Complemental strand, 32083371 - 32083235
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | |||||| |||  ||||||||| | | ||| |||||||||||| | |||||| | |  | | ||||||| ||| | |||||    
T  32083371 ttggagatcatatcataccccaagttgcacaatttaaatatcttgggtccatagtacaaaatgacggagaaatagaggcaaatgtaaatcatcgtattca 32083272  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtt 219  Q
    || | |||||||||||| ||| || | ||||||||||    
T  32083271 agctgggtggttgaaatggagaagagcctcaggtgtt 32083235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 3877491 - 3877545
Alignment:
Q  69 tttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    |||||||||| ||||||||||| ||||||| |||||| ||||||  |||||||||    
T  3877491 tttagaggtaaaaattggagattatatcatttcacaaattacacaatttaaatat 3877545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 8671576 - 8671714
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| |  |||||||||||||||||||| | | |||  | ||||||||| | | |||| | | || ||||||||  ||| | |||||    
T  8671576 ttggagatcatatcataccctaagttacacggtttaaatatcttgggtccttcgtacaaaatgacgaagaaatagaagcagatgtaagtcatcgtattca 8671675  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | ||||||| |||| ||| || | ||||||||||||    
T  8671676 agctgggtggttaaaatggagaagagactcaggtgtttt 8671714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 51441390 - 51441252
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | |||||||||| |||||||||| | | |||| |  |||||||| | |||||| | | || |||| ||| ||||   |||||    
T  51441390 ttggagatcatatcataccccaagttacacagtttaaatatcttgggtctttcatacaaaatgacggagaaatagaagcagatctaagccatcatattca 51441291  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | |||| |||||||    
T  51441290 agctgggtggttgaaatggagaagagcctcaagtgtttt 51441252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 19936177 - 19936294
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtac-aaaataatggagaagttggaggagatgtaaaccatagaattc 181  Q
    ||||||||||||||||| | ||||||||| ||||||||||| | | ||| ||| ||| ||||| | |||||| | | || | ||||||| ||| | ||||    
T  19936177 ttggagatcatatcataccccaagttacatggtttaaatatcttgggtccataatacaaaaatgaaggagaaatagaagcatatgtaaatcatcgtattc 19936276  T
Q  182 aagttaggtggttgaaat 199  Q
    ||| | ||||||||||||    
T  19936277 aagctgggtggttgaaat 19936294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 37463491 - 37463378
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    |||||||||||||||||   | |||||||| |||||||||| | | ||| |||||||||||| | |||||| | | || ||||||| | ||| | ||| |    
T  37463491 ttggagatcatatcatactccgagttacacagtttaaatatcttgagtccatagtacaaaatgacggagaaatagaagcagatgtatatcattgtattta 37463392  T
Q  183 agttaggtggttga 196  Q
    || |||||||||||    
T  37463391 agctaggtggttga 37463378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 32066907 - 32066836
Alignment:
Q  70 ttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaat 144  Q
    ||||||||  |||||||||||||||||||   ||||||||||| |||||||||| | | ||  ||||||||||||    
T  32066907 ttagaggtgaaaattggagatcatatcat---acaagttacacagtttaaatattttgggttcatagtacaaaat 32066836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 52442899 - 52442823
Alignment:
Q  316 taatgaaccaacacgaaaatagattaagtataacatagatgatgatattgtgttggatgtatggtaagacgagacaa 392  Q
    ||||||| |||||| |||||| ||||||  || || | |||| ||| ||||||||||||| ||||||||| ||||||    
T  52442899 taatgaaacaacacaaaaataaattaagcgtagcagacatgaggatgttgtgttggatgtgtggtaagactagacaa 52442823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 237
Target Start/End: Complemental strand, 43793708 - 43793515
Alignment:
Q  41 aatttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtaca 140  Q
    |||||||||| ||||||| |||||| ||| |||||||  || || |||||||||||||| ||| ||||||||  ||||||||| | | ||||||||||||    
T  43793708 aatttagcaagaggcgaagcgtttcgagtgtagaggtgaaagttagagatcatatcataccactagttacacattttaaatatcttgggtctatagtaca 43793609  T
Q  141 aaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    |||| | | |||| |   ||||||||||||||||  |||  ||| |||||||||||||| |||||||  ||||||||| |||| ||||| |||||||    
T  43793608 aaatgacgaagaaat---aggagatgtaaaccatcaaatctaagctaggtggttgaaatggaggagttcctcaggtgtattatgtgatgtgaaagta 43793515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 38606661 - 38606799
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||||| ||||||||||||||||||||| | | ||| |||||||||||| | | |||| | | || ||||||||||||| | |||||    
T  38606661 ttggagatcatatcatatcccaagttacacggtttaaatatcttgggtccatagtacaaaatgacgaagaaatagaagcagatgtaaaccatcgtattca 38606760  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | || |||||||||    
T  38606761 agctgggtggttgaaatggagaagagccttaggtgtttt 38606799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 46356477 - 46356339
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  46356477 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtcctttgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 46356378  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    |||| |||||||||||| ||| || | ||||||||||||    
T  46356377 agttgggtggttgaaatggagaagagcctcaggtgtttt 46356339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 33350432 - 33350294
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||| | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  33350432 ttggagatcatatcataccccaagttacacggtttaaatatctagggtctttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 33350333  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | |||| |||||||    
T  33350332 agctgggtggttgaaatggagaagagcctcaagtgtttt 33350294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 221
Target Start/End: Original strand, 11593620 - 11593754
Alignment:
Q  87 agatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagtt 186  Q
    ||||||||||||| | ||||||| ||||||||||||| | | |||  | ||||||||| |||||||| | | || |||||||| |||| | ||||||| |    
T  11593620 agatcatatcataccccaagttagacggtttaaatatcttgggtccttcgtacaaaatgatggagaaatagaagcagatgtaagccatcgtattcaagct 11593719  T
Q  187 aggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
     |||||||||||| ||| || | ||||||||||||    
T  11593720 gggtggttgaaatggagaagagcctcaggtgtttt 11593754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 36651650 - 36651788
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | |||||||| |||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  36651650 ttggagatcatatcataccccaagttacgcggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 36651749  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  36651750 agctgggtggttgaaatggagaagagcctcaggtgtttt 36651788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 31004880 - 31005017
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||| ||||||||| | |  ||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  31004880 ttggagatcatatcataccccaagttacacg-tttaaatatcttggctccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 31004978  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    |||| |||||||||||| ||| || | ||||||||||||    
T  31004979 agttgggtggttgaaatggagaagagcctcaggtgtttt 31005017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 32630263 - 32630333
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaa 153  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | ||| ||| |||||||| ||||||||    
T  32630263 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccatattacaaaatgatggagaa 32630333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 37616573 - 37616710
Alignment:
Q  84 tggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaa 183  Q
    |||||||||||||||| | ||||||||||| ||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | ||||||    
T  37616573 tggagatcatatcataccccaagttacacgatttaaatatcttgggtcctttgtacaaaatgacggagaaatagaagcagatgtaagccattgtattcaa 37616672  T
Q  184 gttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    | | |||||||||||| ||| || | |||| |||||||    
T  37616673 gctgggtggttgaaatggagaagagcctcaagtgtttt 37616710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 18637236 - 18637387
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||||||||||||||||  ||||||||| |   ||  |||||||||||| | || ||| |   || ||||||||||||| |||| ||    
T  18637236 ttggagatcatatcatatcacaagttacacattttaaatatcttaagttgatagtacaaaatgacggggaaat---agaagatgtaaaccatcgaatcca 18637332  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    || |  |  |||||||| |||||||| |||| ||||||||| |||| | ||||||    
T  18637333 agctgagcagttgaaatggaggagtgcctcatgtgttttatgtgatacaaaagta 18637387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 18650671 - 18650822
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||||||||||||||||  ||||||||| |   ||  |||||||||||| | || ||| |   || ||||||||||||| |||| ||    
T  18650671 ttggagatcatatcatatcacaagttacacattttaaatatcttaagttgatagtacaaaatgacggggaaat---agaagatgtaaaccatcgaatcca 18650767  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    || |  |  |||||||| |||||||| |||| ||||||||| |||| | ||||||    
T  18650768 agctgagcagttgaaatggaggagtgcctcatgtgttttatgtgatacaaaagta 18650822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 36514596 - 36514531
Alignment:
Q  320 gaaccaacacgaaaatagattaagtataacatagatgatgatattgtgttggatgtatggtaagac 385  Q
    ||||||||||||||||| ||||||| || || |||||| ||| ||| ||||||||| |||||||||    
T  36514596 gaaccaacacgaaaataaattaagtgtagcagagatgaggatgttgcgttggatgtgtggtaagac 36514531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 12965677 - 12965764
Alignment:
Q  161 gagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagtattactcaagttg 249  Q
    ||||||||| |||| ||||||||||| |||||||||||| || |||||  ||| ||||||||| |||| ||||| ||  ||||||||||    
T  12965677 gagatgtaatccattgaattcaagttgggtggttgaaatgga-gagtgcatcaagtgttttatgtgatacgaaaataccactcaagttg 12965764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 18608316 - 18608276
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  18608316 ttggagatcatatcatatcacaagttacacattttaaatat 18608276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 18626562 - 18626602
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  18626562 ttggagatcatatcatatcacaagttacacattttaaatat 18626602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 20499711 - 20499791
Alignment:
Q  43 tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    |||||||||||||||| ||||||||| ||||| | | |||   |||||||||||||| ||| ||||||||  |||||||||    
T  20499711 tttagcaaaaggcgaagcgtttctagcttagacgaaaaaacatgagatcatatcataccaccagttacacattttaaatat 20499791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 39907005 - 39906965
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  39907005 ttggagatcatatcatatcccatgttacacggtttaaatat 39906965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 195
Target Start/End: Original strand, 49028923 - 49029035
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    |||||||||| |||||| | ||||||||||||||||||||| | | |||  | ||||||||| |||||||| | | || |||||||  |||| | |||||    
T  49028923 ttggagatcagatcataccccaagttacacggtttaaatatcttgggtcctttgtacaaaatgatggagaaatagaagcagatgtatgccatcgtattca 49029022  T
Q  183 agttaggtggttg 195  Q
    || | ||||||||    
T  49029023 agctgggtggttg 49029035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 24177821 - 24177734
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaa 170  Q
    ||||||||||||||||| | ||| |||||||||||||||||   | ||| |||||||||||| | |||||| | | || |||||||||    
T  24177821 ttggagatcatatcataccccaatttacacggtttaaatatcacgggtcaatagtacaaaatgacggagaaatagaagcagatgtaaa 24177734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 24550304 - 24550178
Alignment:
Q  94 atcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggt 193  Q
    ||||||||| |||||||||| ||||||||| |   ||| ||| |||||||  | |||  | | | ||||||||||||   | ||||||||||| ||||||    
T  24550304 atcatatcataagttacacgatttaaatatctttagtccatattacaaaacgacggattaatagaaggagatgtaaattgttgaattcaagttgggtggt 24550205  T
Q  194 tgaaatagaggagtgtctcaggtgttt 220  Q
    |||||| |||||| |||||| ||||||    
T  24550204 tgaaatggaggagggtctcacgtgttt 24550178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 221
Target Start/End: Original strand, 48919046 - 48919182
Alignment:
Q  85 ggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaag 184  Q
    ||||||||||| | | | ||||||||||||||||||||| | |  || |||||||||||| | |||||| | | || | |||| || ||| | |||||||    
T  48919046 ggagatcatattacaccccaagttacacggtttaaatattttggatccatagtacaaaatgacggagaaatagaagcatatgtgaatcatcgtattcaag 48919145  T
Q  185 ttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
     | ||| |||||||| ||| || | ||||||||||||    
T  48919146 ctgggtagttgaaatggagaagagcctcaggtgtttt 48919182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 25191035 - 25191173
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||||||||||||||| |||||||| | | || | ||||||| ||| | |||||    
T  25191035 ttggagatcatatcatagcccaagttacacggtttaaatatcttgggtctatagtacaaaatgatggagaaatagaagcaaatgtaaatcatcgtattca 25191134  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || ||||||||||||||    
T  25191135 agctgggtggttgaaatggagaagagtctcaggtgtttt 25191173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 38849750 - 38849888
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||| ||||||||||||||||| | | ||| | |||||||||| | |||||| | | || |||||||| |||| | |||||    
T  38849750 ttggagatcatatcatacctcaatttacacggtttaaatatcttgggtccacagtacaaaatgacggagaaatagaagcagatgtaagccattgtattca 38849849  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  38849850 agctgggtggttgaaatggagaagagcctcaggtgtttt 38849888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 44395046 - 44395199
Alignment:
Q  43 tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaa 142  Q
    ||||||||||||| || | |||||||||||||| |  || |||||||||||| || | | ||||||||||| ||||||||| | | ||| ||||||| ||    
T  44395046 tttagcaaaaggcaaagcatttctagtttagagatgaaagttggagatcataccacaacgcaagttacacgatttaaatatctcgggtccatagtactaa 44395145  T
Q  143 ataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaat 199  Q
    | ||  ||||| |   || ||||||||||||| |||||||||||| |||||||||||    
T  44395146 acaacagagaaat---agaagatgtaaaccatcgaattcaagttaagtggttgaaat 44395199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 27917228 - 27917373
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||||| ||||||||||||||||||||| | | ||| |||||||||||| | |||||| |   || | || |||| ||| | |||||    
T  27917228 ttggagatcatatcatatcccaagttacacggtttaaatatcttgagtccatagtacaaaatgacggagaaatataagcatatataaatcatcgtattca 27917327  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttatatgat 228  Q
    |||| ||| | |||||||||| || | |||| ||||||||| ||||    
T  27917328 agttgggtagctgaaatagagaagagcctcatgtgttttatgtgat 27917373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 1448279 - 1448199
Alignment:
Q  43 tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    |||| ||| ||| ||||| ||||||| ||||||||| || |||||||||||||||||||| ||||| || |||||||||||    
T  1448279 tttaacaagaggtgaaacatttctagcttagaggtaaaagttggagatcatatcatatcaaaagttgcatggtttaaatat 1448199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 46145775 - 46145971
Alignment:
Q  49 aaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatg 148  Q
    |||||||||| | ||| ||  ||||||||  || |||||||| || ||||| ||||||||| ||||||||||||| | | ||| |||||||||||  | |    
T  46145775 aaaaggcgaagcatttttaacttagaggttaaagttggagattatgtcataccacaagttatacggtttaaatattttgagtccatagtacaaaacgacg 46145874  T
Q  149 gagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagtattactcaa 245  Q
     || | | | | ||| |||||||||| ||||||||||||| |||||| ||| ||| |  | | | ||||||||||||||| | |||||||| |||||    
T  46145875 tagcaatagaaagaggtgtaaaccattgaattcaagttagatggttggaatggagcaaggccaccggtgttttatatgattcaaaagtattgctcaa 46145971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 249
Target Start/End: Original strand, 11581119 - 11581266
Alignment:
Q  102 acaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatag 201  Q
    ||||||||||  |||||||||||| | |||||| ||||||||| || ||||| |||  |||||| |||| ||||  ||||||  |   ||||||||||      
T  11581119 acaagttacaaagtttaaatatatcgggtctatggtacaaaatgattgagaaattgatggagatataaatcataagattcaaactgaatggttgaaatga 11581218  T
Q  202 aggagtgtctcaggtgttttatatgatgcgaaagtattactcaagttg 249  Q
    | || ||||||||||||||||| |||| |||||||||  |||||||||    
T  11581219 atgaatgtctcaggtgttttatgtgattcgaaagtatcgctcaagttg 11581266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 28245093 - 28245231
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||| ||| | |||||||||||| |||||||| | |  ||  | ||||||||| |||||||| | | || |||||||| |||| | |||||    
T  28245093 ttggagatcatataataccccaagttacacggcttaaatatcttggatccttcgtacaaaatgatggagaaatagaagcagatgtaagccatcgtattca 28245192  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || ||||||| ||||||    
T  28245193 agctgggtggttgaaatggagaagagtctcagttgtttt 28245231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 47542337 - 47542199
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||| ||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| ||||   |||||    
T  47542337 ttggagatcatttcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcatattca 47542238  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  47542237 agctgggtggttgaaatggagaagagcctcaggtgtttt 47542199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 51448335 - 51448197
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| | || | |||||    
T  51448335 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagctatcgtattca 51448236  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||| ||||||||    
T  51448235 agctgggtggttgaaatggagaagagcctcgggtgtttt 51448197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 50632372 - 50632288
Alignment:
Q  165 tgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagtattactcaagttg 249  Q
    |||||||||||||||||||  | |||||||||||| |||||||| || |  |||||||| ||||| |||||||  ||||||||||    
T  50632372 tgtaaaccatagaattcaacctgggtggttgaaatggaggagtgccttaaatgttttatgtgatgagaaagtaccactcaagttg 50632288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 19757724 - 19757787
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataa 146  Q
    ||||||||||||||||| | ||||||||| ||||||||||| | | ||| ||||||||||||||    
T  19757724 ttggagatcatatcataccccaagttacatggtttaaatatcttgggtccatagtacaaaataa 19757787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 50632528 - 50632442
Alignment:
Q  162 agatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagtattactcaagtt 248  Q
    ||||| ||||||||||||||||  | ||||||||| || |||||||| || | ||||||||| ||||| |||||||  |||||||||    
T  50632528 agatggaaaccatagaattcaacctgggtggttgagatggaggagtgccttaagtgttttatgtgatgagaaagtaccactcaagtt 50632442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 49841503 - 49841572
Alignment:
Q  321 aaccaacacgaaaatagattaagtataacatagatgatgatattgtgttggatgtatggtaagacgagac 390  Q
    |||||||| ||||||| ||||||| || ||||||||| ||| ||||||||||||| | ||||||| ||||    
T  49841503 aaccaacaagaaaataaattaagtgtagcatagatgaggatgttgtgttggatgtgtagtaagactagac 49841572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 29817161 - 29817280
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| || ||||||||||||| |||||| |  || | |||||||||||| | ||| || |    | ||||||||| ||| | |||||    
T  29817161 ttggagatcatatcataccataagttacacggttcaaatatct-ttgaccatagtacaaaatgacggataaataacggcagatgtaaatcatcgtattca 29817259  T
Q  183 agttaggtggttgaaatagag 203  Q
    |||| ||||||||||||||||    
T  29817260 agttgggtggttgaaatagag 29817280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 30345267 - 30345323
Alignment:
Q  167 taaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttat 223  Q
    |||| ||||| ||||||||| |||||||||||| ||| || ||||||||||||||||    
T  30345267 taaatcatagtattcaagttgggtggttgaaatggagaagagtctcaggtgttttat 30345323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 52138484 - 52138524
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  52138484 ttggagatcatatcataccccaagttacacggtttaaatat 52138524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 805634 - 805712
Alignment:
Q  159 aggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    ||||| |||||| ||||||||  ||| | |||||||||||||||||||||  | |||| |||||| ||||| |||||||    
T  805634 aggagttgtaaatcatagaatctaagatgggtggttgaaatagaggagtgcattaggtattttatgtgatgtgaaagta 805712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 123
Target Start/End: Original strand, 9258541 - 9258575
Alignment:
Q  89 atcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||| |||||||||||||||||||||    
T  9258541 atcatatcatatcccaagttacacggtttaaatat 9258575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 24302062 - 24302013
Alignment:
Q  164 atgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctca 213  Q
    ||||||| ||||||||| ||||||||||||| |||||||| |||| ||||    
T  24302062 atgtaaatcatagaatttaagttaggtggttaaaatagagaagtgcctca 24302013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 1448134 - 1448078
Alignment:
Q  188 ggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagtattactca 244  Q
    |||||||||||| ||||| || |||  ||||||||| ||||||||||||| ||||||    
T  1448134 ggtggttgaaatggaggaatgcctcgtgtgttttatgtgatgcgaaagtactactca 1448078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 19736822 - 19736862
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||||||| | ||||||||| |||||||||||    
T  19736822 ttggagatcatatcataccccaagttacatggtttaaatat 19736862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 7e-22; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 3394303 - 3394504
Alignment:
Q  20 aagacggagtatatagaatttaatttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaa 119  Q
    ||||| |||||||| |||| ||||| ||||||||| |||  |  ||||  || |||||  || ||||||||||||||||| | |||||||||||||||||    
T  3394303 aagacagagtatatggaatgtaattcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcataccccaagttacacggtttaa 3394402  T
Q  120 atatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgtt 219  Q
    |||| | | ||| |||||||||||| | |||||| | | || ||||||||| ||| | ||||||| | |||||||||||| |||  | | ||||||||||    
T  3394403 atatcttgggtccatagtacaaaatgacggagaaatagaagcagatgtaaatcatcgtattcaagctgggtggttgaaatggagatgagcctcaggtgtt 3394502  T
Q  220 tt 221  Q
    ||    
T  3394503 tt 3394504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 73 - 221
Target Start/End: Complemental strand, 12493023 - 12492875
Alignment:
Q  73 gaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaacc 172  Q
    |||||| || ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| ||    
T  12493023 gaggtaaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagcc 12492924  T
Q  173 atagaattcaagttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | ||||||| | |||||||||||| ||| || | ||||||||||||    
T  12492923 atcgtattcaagctgggtggttgaaatggagaagagcctcaggtgtttt 12492875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 21915545 - 21915696
Alignment:
Q  86 gagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagt 185  Q
    ||||| ||||||||  |||||||||||||||||||||||| |  || |||||||||||||| | |||| | | |||| |  |||||||| || | |||||    
T  21915545 gagattatatcataatacaagttacacggtttaaatatattggttcaatagtacaaaataacgaagaaatagaaggaaaattaaaccattgagtccaagt 21915644  T
Q  186 taggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    | ||| |||||||| |||||||| ||||| ||||||||  ||||| ||||||    
T  21915645 tgggtagttgaaatggaggagtgcctcagatgttttatgcgatgcaaaagta 21915696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 3301505 - 3301643
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | ||| ||||||| |||| | |||||| | | || ||||| ||| ||| | |||||    
T  3301505 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccatagtaccaaatgaaggagaaatagaagcagatgcaaatcatcgtattca 3301604  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | ||||||||||||||||  | | ||||||||||||    
T  3301605 agctgggtggttgaaatagagatgagcctcaggtgtttt 3301643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 16348028 - 16347891
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | ||||| |||||||||||| | |||||| |   ||   ||||||| ||| | |||||    
T  16348028 ttggagatcatatcataccccaagttacacggtttaaatatcttgtgtccatagtacaaaatgacggagaaataaaagcgtatgtaaatcatcgtattca 16347929  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || |||||||||||||| ||| || | ||||||||||||    
T  16347928 ag-taggtggttgaaatggagaagagcctcaggtgtttt 16347891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 1288215 - 1288077
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  1288215 ttggagatcatatcataccccaagttacacggtttaaatatcttgagtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 1288116  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    |||| | |||||||||| ||| || | |||| |||||||    
T  1288115 agttggatggttgaaatggagaagagcctcatgtgtttt 1288077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 2076100 - 2075962
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| |  ||||| | | || |||||||| |||| | |||||    
T  2076100 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacagagaaatagaagcagatgtaagccatcgtattca 2076001  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    |||| ||||||||||||  || || | ||||||||||||    
T  2076000 agttgggtggttgaaatgaagaagagcctcaggtgtttt 2075962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 20318647 - 20318785
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| ||||   |||||    
T  20318647 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcatattca 20318746  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  20318747 agctgggtggttgaaatggagaagagcctcaggtgtttt 20318785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 1274921 - 1275037
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  1274921 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 1275020  T
Q  183 agttaggtggttgaaat 199  Q
    || | ||||||||||||    
T  1275021 agctgggtggttgaaat 1275037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 10638953 - 10639091
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||| ||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | |||||| | | || |||||||| |||| | |||||    
T  10638953 ttggaaatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 10639052  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | || |||||||||    
T  10639053 agctgggtggttgaaatggagaagagccttaggtgtttt 10639091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 15370812 - 15370739
Alignment:
Q  164 atgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    ||||||||||| ||||||||| || ||||||||||| |||||||||||||  | |||||| |||||| ||||||    
T  15370812 atgtaaaccattgaattcaagctaagtggttgaaatggaggagtgtctcaaatattttatgtgatgcaaaagta 15370739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 43558481 - 43558400
Alignment:
Q  42 atttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    |||||||||||||| ||  |||||||| | ||||||  || |||||||||||| |||| ||||||||||||| |||||||||    
T  43558481 atttagcaaaaggcaaagtgtttctagctcagaggtgaaagttggagatcatagcataccacaagttacacgatttaaatat 43558400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 6368591 - 6368491
Alignment:
Q  43 tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaa 142  Q
    |||||||| ||| ||||| |||||| | |||||||  ||  ||||||||||| |||| ||||||||||||  ||||||||| | || |||||||||||||    
T  6368591 tttagcaagaggtgaaacatttctaatgtagaggtgaaagatggagatcataacataccacaagttacacaatttaaatatcttgtatctatagtacaaa 6368492  T
Q  143 a 143  Q
    |    
T  6368491 a 6368491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 221
Target Start/End: Complemental strand, 28977496 - 28977345
Alignment:
Q  70 ttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaa 169  Q
    ||||||||  || ||||||||||||||||| | ||||| ||||||||||||||| | | |||  | ||||||||| | |||| | | | || ||||||||    
T  28977496 ttagaggtgaaagttggagatcatatcataccccaagtcacacggtttaaatatcttgggtccttcgtacaaaatgacggagtaatagaagtagatgtaa 28977397  T
Q  170 accatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
     |||| | ||||||| | |||||||||||| ||| || | ||| ||||||||    
T  28977396 gccatcgtattcaagctgggtggttgaaatggagaagagcctcgggtgtttt 28977345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 24178180 - 24178318
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| |  ||||||||||||||||| || | | |||  | ||||||||| | |||||| | | || |||||||| ||||   |||||    
T  24178180 ttggagatcatatcataccctaagttacacggtttaaagatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcatattca 24178279  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    |||| |||||||||||| ||| || | |||| |||||||    
T  24178280 agttgggtggttgaaatggagaagagcctcaagtgtttt 24178318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 16134570 - 16134505
Alignment:
Q  320 gaaccaacacgaaaatagattaagtataacatagatgatgatattgtgttggatgtatggtaagac 385  Q
    |||||||||| || ||| | |||||||| |||| |||| ||| |||||||||||||||||||||||    
T  16134570 gaaccaacacaaacatatagtaagtatagcataaatgaggatgttgtgttggatgtatggtaagac 16134505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 38579127 - 38578976
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||| ||| |||||||||||| |||||||||| | | ||  |||||||||||| | ||  ||     || |||||||||| || |||| ||    
T  38579127 ttggagatcatattatagcacaagttacacagtttaaatatcttgagttgatagtacaaaatgacgggaaa---acagaagatgtaaacgatcgaatcca 38579031  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgttttatatgatgcgaaagta 237  Q
    || |  ||||||||||| |||||||| |||| ||||||||| |||| | ||||||    
T  38579030 agctgagtggttgaaatggaggagtgcctcatgtgttttatgtgatacaaaagta 38578976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 400
Target Start/End: Original strand, 27998315 - 27998394
Alignment:
Q  321 aaccaacacgaaaatagattaagtataacatagatgatgatattgtgttggatgtatggtaagacgagacaatatagaat 400  Q
    ||||||||||||| |  |||||| ||| || |||||| ||| ||| ||||||||| ||||||||| |||||| |||||||    
T  27998315 aaccaacacgaaagtgaattaagcatatcagagatgaggatgttgcgttggatgtgtggtaagactagacaaaatagaat 27998394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 17341885 - 17341757
Alignment:
Q  26 gagtatatagaatttaa-tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatata 124  Q
    |||||||| |||| ||| ||||| ||||||| ||| | |||||  || |||||  || ||||||||||||||||| |  || ||||| ||||||||||||    
T  17341885 gagtatatggaatgtaactttagaaaaaggccaaatggttctaccttggaggtggaagttggagatcatatcatacctgaaattacatggtttaaatata 17341786  T
Q  125 tggtgtctatagtacaaaataatggagaa 153  Q
    | | ||| |||||| ||||| || |||||    
T  17341785 ttgggtccatagtagaaaatgatagagaa 17341757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 27302573 - 27302513
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaa 143  Q
    ||||||||||||||||| | |||  |||||||||||||||| | ||||| ||| |||||||    
T  27302573 ttggagatcatatcatacctcaaactacacggtttaaatatcttgtgtccataatacaaaa 27302513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 9706432 - 9706570
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | ||| || ||||||||| |||||||| | | || || |||||| ||| | |||||    
T  9706432 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccatggtacaaaatgatggagaaatagaagcaggtgtaaatcatcgtattca 9706531  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || |  |||||||||||    
T  9706532 agctgggtggttgaaatggagaagagcatcaggtgtttt 9706570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 5631476 - 5631612
Alignment:
Q  86 gagatcatatcatatcacaagttacacggtttaaata-tatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaag 184  Q
    |||||||||||||| | |||||||||||||||||||| | | | ||| |||||||||||| | |||||| | | || ||||||||| ||| | |||||||    
T  5631476 gagatcatatcataccccaagttacacggtttaaatatttttgggtccatagtacaaaatgacggagaaatagaagcagatgtaaatcatcgtattcaag 5631575  T
Q  185 ttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
     | |||||||||||| ||| || ||||| ||||||||    
T  5631576 ctgggtggttgaaatggagaagagtctcgggtgtttt 5631612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 5258776 - 5258638
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | |||||||||| |||||||||| | | ||| |||||||||||| | |||||| | | ||  |||||| | ||| | |||||    
T  5258776 ttggagatcatatcataccccaagttacacagtttaaatatcttgggtccatagtacaaaatgacggagaaatagaagctgatgtacatcatcgtattca 5258677  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | |||| |||||||    
T  5258676 agctgggtggttgaaatggagaagagcctcatgtgtttt 5258638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 7079836 - 7079934
Alignment:
Q  129 gtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatga 227  Q
    |||||||||||||||  |||||||| ||| |||| || ||||||||| |||||||| | | ||||||||||  || |||| |||||||| |||||||||    
T  7079836 gtctatagtacaaaacgatggagaaattgaaggaaatctaaaccataaaattcaagctggatggttgaaattaagtagtgcctcaggtgctttatatga 7079934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 20428262 - 20428124
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| |||||||||| |||||||||||||| | ||| | |||||||||  | ||| || | | || ||||||||| ||| | || ||    
T  20428262 ttggagatcatatcataccacaagttacgcggtttaaatatattgggtccacagtacaaaacgacggaaaaatagaagcagatgtaaatcatcgtatcca 20428163  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||| ||||||||    
T  20428162 agctgggtggttgaaatggagaagagcctcgggtgtttt 20428124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 10100483 - 10100422
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaat 144  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | ||| ||||||||||||    
T  10100483 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccatagtacaaaat 10100422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 2689313 - 2689372
Alignment:
Q  84 tggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaa 143  Q
    |||||||||||||||| |  |||||||||||||||||||| | | |||||||||||||||    
T  2689313 tggagatcatatcataccctaagttacacggtttaaatattttgggtctatagtacaaaa 2689372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 6641988 - 6641914
Alignment:
Q  131 ctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagagga 205  Q
    |||||||||||||| |  ||||| | | |||||||||||||||| ||||| ||||| |||||||||||| |||||    
T  6641988 ctatagtacaaaatgagagagaaatagaaggagatgtaaaccattgaattaaagttgggtggttgaaatggagga 6641914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 8812030 - 8811940
Alignment:
Q  55 cgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaata 145  Q
    |||| |||||||| |||| ||||  | |||| ||||||||||||| |||||||||||   ||||||||| |   |||||||||||||||||    
T  8812030 cgaagcgtttctaatttacaggtgaacattgaagatcatatcataccacaagttacaaaatttaaatatctcaagtctatagtacaaaata 8811940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 19338547 - 19338459
Alignment:
Q  140 aaaataatggagaagttggaggagatgtaaaccatagaattcaagttaggtggttgaaatagaggagtgtctcaggtgttttatatgat 228  Q
    ||||| |||||||| | || ||||||||||| ||||| ||||||||||||| | ||||||  ||||| |  || |||||||||| ||||    
T  19338547 aaaatgatggagaaatagggggagatgtaaatcataggattcaagttaggtagatgaaatgcaggagagcttcgggtgttttatgtgat 19338459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 20834440 - 20834380
Alignment:
Q  325 aacacgaaaatagattaagtataacatagatgatgatattgtgttggatgtatggtaagac 385  Q
    ||||||| |||| | ||| |||||| ||||||| ||||||||||||||||| || ||||||    
T  20834440 aacacgagaataaaataaatataacgtagatgaggatattgtgttggatgtgtgataagac 20834380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 9273 - 9353
Alignment:
Q  43 tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    |||||||||||| |||  |||||||||||||||||| || |||||||||||||||||| |  ||||||||| |||||||||    
T  9273 tttagcaaaaggtgaattgtttctagtttagaggtaaaagttggagatcatatcatattattagttacacgatttaaatat 9353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 195
Target Start/End: Original strand, 82377 - 82489
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    |||||||| |||||||| ||||||||||||||||||||||| | | ||| |||||| ||||| | |||||| | | || ||||||||| ||| | |||||    
T  82377 ttggagattatatcataccacaagttacacggtttaaatatcttgggtccatagtaaaaaatgacggagaaatagaagcagatgtaaatcatcgtattca 82476  T
Q  183 agttaggtggttg 195  Q
    || | ||||||||    
T  82477 agctgggtggttg 82489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 2896 - 2758
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | ||||||||||||||||||||| | | |||  | ||||||||| | | |||| | | || ||||||||  ||| | |||||    
T  2896 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacgaagaaatagaagcagatgtaagtcatcgtattca 2797  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | ||||||||||||    
T  2796 agctgggtggttgaaatggagaagagcctcaggtgtttt 2758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 12224 - 12154
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaa 153  Q
    ||||||||||||||||| | ||||||||| ||||||||||| | | ||| |||||||||||| | ||||||    
T  12224 ttggagatcatatcataccccaagttacatggtttaaatatcttgggtccatagtacaaaatgacggagaa 12154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 5848 - 5888
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatat 123  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  5848 ttggagatcatatcataccccaagttacacggtttaaatat 5888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 4476 - 4386
Alignment:
Q  55 cgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaata 145  Q
    |||| |||||||| |||| ||||  | |||| ||||||||||||| |||||||||||   ||||||||| |   |||||||||||||||||    
T  4476 cgaagcgtttctaatttacaggtgaacattgaagatcatatcataccacaagttacaaaatttaaatatctcaagtctatagtacaaaata 4386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 31124 - 31262
Alignment:
Q  83 ttggagatcatatcatatcacaagttacacggtttaaatatatggtgtctatagtacaaaataatggagaagttggaggagatgtaaaccatagaattca 182  Q
    ||||||||||||||||| | |||||||||||||||||| || | | |||  | ||||||||| | |||||| |   || |||||||  |||| | |||||    
T  31124 ttggagatcatatcataccccaagttacacggtttaaacatcttgggtccttcgtacaaaatgacggagaaataaaagtagatgtaggccatcgtattca 31223  T
Q  183 agttaggtggttgaaatagaggagtgtctcaggtgtttt 221  Q
    || | |||||||||||| ||| || | |||| |||||||    
T  31224 agctgggtggttgaaatggagaagagcctcaagtgtttt 31262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University