View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12891_high_43 (Length: 343)
Name: NF12891_high_43
Description: NF12891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12891_high_43 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 16 - 323
Target Start/End: Original strand, 23587325 - 23587637
Alignment:
| Q |
16 |
atattaacaaggtgcttaacaatgtgctaaatgctaatcagcaatcaccaaatcaaaataggaaaagtcattggattttgccttcatttctctaacgatg |
115 |
Q |
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| T |
23587325 |
atattaacaaggtgcttaacaatgtgctaaatgctaatcagcaatcaccaaatcaaaataggaaaagtcattggattttgccttcatttctctaacgatg |
23587424 |
T |
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| Q |
116 |
ctgagagtctcattcaaagataacatgtttgaatctaatttcaaaggaaacatggaaaggtaatctcaaactcatggcttctgcaacatcaga-----at |
210 |
Q |
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| T |
23587425 |
ctgagagtctcattcaaagataacatgtttgaatccaatttcaaaggaaacatggaaaggtaatctcaaactcatggcttctgcaacatcagaatcagat |
23587524 |
T |
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| Q |
211 |
caggaagagcctaaaaactccagatagtagcatccattaccaagtcattttcatcacgaacaacaattccaatatcccatttattgttagagctttgcta |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
23587525 |
caggaagagcctaaaaactccagatagtagcatccattaccaagtcattttcatcacgaacaacaattccaataccccatttattgttagagctttgcta |
23587624 |
T |
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| Q |
311 |
tataaagcgacaa |
323 |
Q |
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||||||||||||| |
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| T |
23587625 |
tataaagcgacaa |
23587637 |
T |
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