View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12891_high_48 (Length: 322)
Name: NF12891_high_48
Description: NF12891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12891_high_48 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 19 - 304
Target Start/End: Original strand, 47724151 - 47724436
Alignment:
| Q |
19 |
gaattacattatgtacaggtaaaccaaaaacaagagcagtttggtgtaactcattgaattgattgaataccaatgtacactttctcaagatnnnnnnnnn |
118 |
Q |
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| T |
47724151 |
gaattacattatgtacaggtaaaccaaaaacaagagcagtttggtgtaactcattcaattgattgaataccaatgtacactttctcaagataaaaagata |
47724250 |
T |
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| Q |
119 |
nnnnnnnnnnnngaggatgagaggaaatctactctcaatactactcgatccgagaaaacattcctagcatagcatgtatccttcccttcttccgccttat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
47724251 |
aaaatgaaaaaagaggatgagaggaaatctactctcaatactactcgatccgagaagacattcctaccatagcatgtatccttcccttcttccgccttat |
47724350 |
T |
|
| Q |
219 |
gcttatatatgcataatgattcttgaacatgacaaaaacgttagttaaattttacatttagcataacagaacaaagacaaggctcc |
304 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
47724351 |
gcttatatatgcataatgattcttgaacatgacaaaaacgttagttaaattttacatttagcatatcagaacaaagacaaggctcc |
47724436 |
T |
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