View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12891_high_67 (Length: 255)
Name: NF12891_high_67
Description: NF12891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12891_high_67 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 44650105 - 44649868
Alignment:
| Q |
1 |
aatcacctggtctttgttaattgttagatttcttattatttttccgttaaatggaaattgtcatattcaaatcgtgtgtatcctctnnnnnnnnntcatg |
100 |
Q |
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| T |
44650105 |
aatcacctggtctttgttaattgttagatttcttattatttttccgttaaatggaaattgtcatattcaaatcgtgtgtatcctctaaaaaaaa-tcatg |
44650007 |
T |
|
| Q |
101 |
tgaatatgtagcaaactttttgataaagaaatccttaatttacaaaccccatgtagcttatgcaagaggatagtcaatagaacctaactccaaaccaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
44650006 |
tgaatatgtagcaaactttttgataaagaaatccttaatttacaaaccccatgtagcttatgcaagaggatagtcaatagaacctaacaccaaaccaaaa |
44649907 |
T |
|
| Q |
201 |
caagcaaattaataagacaaaaacttgtttacggttcat |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
44649906 |
caagcaaattaataagacaaaaacttgtttacggttcat |
44649868 |
T |
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