View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12891_low_66 (Length: 266)
Name: NF12891_low_66
Description: NF12891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12891_low_66 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 47456129 - 47456366
Alignment:
| Q |
18 |
gttgccaaccaagttaaatagatttaaataattgtcaaggacattgctgctatttgcatatttctacttttcatcaaatagattattttttgttcaattt |
117 |
Q |
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| T |
47456129 |
gttgccaaccaagttaaatagatttaaataattgtcaaggacattgctgctatttgcatatttctacttttcatcaaatagattattttttgttcaattt |
47456228 |
T |
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| Q |
118 |
gtttgtgtttaatcataagggtaaatttgttaatgttaagagagaataatattagaaagtgaatgatgtccactgcattcaataaaaagtatgcaactga |
217 |
Q |
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| T |
47456229 |
gtttgtgtttaatcataagggtaaatttgttaatgttaagagagaataatattagaaagtgaatgatgtccattgcattcaataaaaagtatgcaactga |
47456328 |
T |
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| Q |
218 |
gtagagcctaagacttaaccaggtttttagttcttcat |
255 |
Q |
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| T |
47456329 |
gtagagcctaagacttaaccaggtttttagttcttcat |
47456366 |
T |
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