View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12898_high_7 (Length: 454)
Name: NF12898_high_7
Description: NF12898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12898_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 15 - 452
Target Start/End: Original strand, 36568053 - 36568490
Alignment:
| Q |
15 |
aaccaccacccttttcttcaccaccacaacaacaataaccatacctttttccactatcatcatcatatttcctcttcttcaccaccttctcctcctctaa |
114 |
Q |
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| T |
36568053 |
aaccaccacccttttcttcaccaccacaacaacaataaccatacctttttccactatcatcatcatatttcctcttcttcaccaccttctcctcctctaa |
36568152 |
T |
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| Q |
115 |
gagaagaactacctcttttaaacctaattccaacaaaacaagaaaaatatgatgaagatcaacaagaacatgaggtggatattcaagaccttccttgcac |
214 |
Q |
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| T |
36568153 |
gagaagaactacctcttttaaacctaattccaacaaaacaagaaaaatatgatgaagatcaacaagaacatgaggtggatattcaagaccttccttgcac |
36568252 |
T |
|
| Q |
215 |
tgccatggatttagaagaaagggaagaagatggtagtagtagaactactactgttactgttgcacttcacataggtttgccaaaccctagtgctgctgaa |
314 |
Q |
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| T |
36568253 |
tgccatggatttagaagaaagggaagaagatggtagtagtagaactactactgttactgttgcacttcacataggtttgccaaaccctagtgctgctgaa |
36568352 |
T |
|
| Q |
315 |
atggcttctgtactttcttcctctaataactcctcagagatcattgtcactgataaagaacatggtggtgaggattcttgttcaggattcatggttaata |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36568353 |
atggcttctgtactttcttcctctaataactcctcagagatcattgtcactgataaagaacatggtggtgaggattcttgttcaggattcatggttaata |
36568452 |
T |
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| Q |
415 |
ataggcttaacaaaggacaatattggatctctgctcct |
452 |
Q |
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| T |
36568453 |
ataggcttaacaaaggacaatattggatccctactcct |
36568490 |
T |
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