View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12899_high_36 (Length: 207)
Name: NF12899_high_36
Description: NF12899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12899_high_36 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 37136037 - 37136214
Alignment:
| Q |
11 |
catcatcaagaagctgacctcaatcattgtctgaatatcaaattgccatttttgtttctttctttcaaatatgtgccctactttctaaaagctctcattt |
110 |
Q |
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| T |
37136037 |
catcatcaagaagctgacctcaatcattgtctgaatatcaaattgccatttttgtttgtttctttcaaatatgtgccctactttctaaaagctctcattt |
37136136 |
T |
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| Q |
111 |
aaggctaaaatactcatctttatgtcttttgtgtactttgcttgatacaaattatttgttgagaagtttgcttggtag |
188 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37136137 |
aaggttaaaatactcatctttatgtcttttgtgtactttgcttgatacaaattatttgttgagaagtttgcttggtag |
37136214 |
T |
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