View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1289_low_22 (Length: 285)

Name: NF1289_low_22
Description: NF1289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1289_low_22
NF1289_low_22
[»] chr7 (61 HSPs)
chr7 (35-237)||(10418379-10418581)
chr7 (37-235)||(144801-144998)
chr7 (37-237)||(5221041-5221240)
chr7 (36-237)||(9767608-9767809)
chr7 (36-202)||(15170872-15171036)
chr7 (36-232)||(6039375-6039570)
chr7 (36-242)||(3736162-3736365)
chr7 (39-237)||(1589064-1589263)
chr7 (36-237)||(21233927-21234127)
chr7 (77-237)||(21502717-21502878)
chr7 (85-237)||(2506882-2507035)
chr7 (36-237)||(6018181-6018382)
chr7 (103-237)||(8317514-8317647)
chr7 (46-128)||(3189518-3189601)
chr7 (108-242)||(23127962-23128095)
chr7 (37-126)||(1586018-1586107)
chr7 (36-100)||(8309947-8310010)
chr7 (36-237)||(10332228-10332428)
chr7 (142-233)||(9918096-9918187)
chr7 (142-233)||(9926008-9926099)
chr7 (139-230)||(21707418-21707509)
chr7 (139-237)||(8052501-8052599)
chr7 (139-237)||(8977543-8977641)
chr7 (143-237)||(20577434-20577528)
chr7 (161-234)||(5471810-5471883)
chr7 (76-237)||(5046909-5047067)
chr7 (169-237)||(23173758-23173826)
chr7 (139-222)||(3585610-3585693)
chr7 (42-124)||(5485455-5485537)
chr7 (39-128)||(19154663-19154753)
chr7 (39-128)||(20754062-20754152)
chr7 (150-237)||(23897177-23897264)
chr7 (139-237)||(4450597-4450695)
chr7 (76-201)||(9134670-9134796)
chr7 (139-237)||(11578712-11578810)
chr7 (136-238)||(25692712-25692814)
chr7 (89-237)||(9978161-9978309)
chr7 (139-235)||(10611639-10611735)
chr7 (79-237)||(5236939-5237098)
chr7 (76-234)||(9288772-9288931)
chr7 (175-234)||(22468691-22468750)
chr7 (103-234)||(9298593-9298723)
chr7 (139-237)||(20597526-20597624)
chr7 (140-237)||(2927801-2927898)
chr7 (77-202)||(7399201-7399327)
chr7 (36-120)||(9501836-9501920)
chr7 (139-240)||(10585257-10585358)
chr7 (177-237)||(1586155-1586215)
chr7 (142-234)||(11804627-11804719)
chr7 (177-237)||(39270345-39270405)
chr7 (169-235)||(13280715-13280781)
chr7 (187-237)||(14195722-14195772)
chr7 (140-237)||(4988144-4988241)
chr7 (140-237)||(4992242-4992339)
chr7 (169-222)||(6046483-6046536)
chr7 (144-201)||(9078991-9079048)
chr7 (85-234)||(9722323-9722472)
chr7 (76-237)||(15611112-15611272)
chr7 (139-235)||(1810830-1810926)
chr7 (143-235)||(13287785-13287877)
chr7 (76-126)||(26249258-26249310)
[»] chr5 (42 HSPs)
chr5 (36-237)||(17469631-17469831)
chr5 (35-237)||(18227435-18227634)
chr5 (37-234)||(24162087-24162283)
chr5 (36-237)||(18832046-18832246)
chr5 (36-235)||(18939344-18939542)
chr5 (44-237)||(24261897-24262091)
chr5 (36-237)||(24263823-24264024)
chr5 (40-235)||(34488684-34488879)
chr5 (36-233)||(22845872-22846069)
chr5 (141-237)||(26122310-26122406)
chr5 (150-237)||(24188835-24188922)
chr5 (80-235)||(31600150-31600305)
chr5 (36-230)||(25572542-25572735)
chr5 (77-237)||(26348306-26348466)
chr5 (36-128)||(15520798-15520891)
chr5 (76-198)||(19761693-19761814)
chr5 (137-211)||(24849666-24849740)
chr5 (169-237)||(19006921-19006989)
chr5 (169-237)||(26253448-26253516)
chr5 (89-235)||(19003840-19003986)
chr5 (181-234)||(22797496-22797549)
chr5 (170-235)||(23266767-23266832)
chr5 (142-235)||(26117366-26117459)
chr5 (136-237)||(26315109-26315209)
chr5 (36-127)||(24188712-24188803)
chr5 (139-234)||(20860265-20860360)
chr5 (139-237)||(19053027-19053125)
chr5 (175-237)||(23387620-23387682)
chr5 (139-237)||(24142333-24142431)
chr5 (177-235)||(25920795-25920853)
chr5 (167-237)||(26069203-26069273)
chr5 (76-124)||(28254754-28254803)
chr5 (144-237)||(29798975-29799068)
chr5 (76-126)||(22797611-22797663)
chr5 (176-223)||(17831658-17831705)
chr5 (143-237)||(16521976-16522070)
chr5 (179-237)||(24513259-24513317)
chr5 (140-237)||(23214898-23214995)
chr5 (67-100)||(24265489-24265522)
chr5 (67-100)||(24342120-24342153)
chr5 (139-236)||(29987882-29987979)
chr5 (169-201)||(15199012-15199044)
[»] chr1 (47 HSPs)
chr1 (43-237)||(21848456-21848650)
chr1 (36-236)||(15526870-15527069)
chr1 (36-242)||(24282825-24283031)
chr1 (36-237)||(26647430-26647629)
chr1 (36-237)||(35133708-35133908)
chr1 (38-237)||(22626227-22626425)
chr1 (60-234)||(44796964-44797138)
chr1 (36-234)||(9783055-9783253)
chr1 (79-236)||(14235358-14235515)
chr1 (37-237)||(23034993-23035191)
chr1 (77-237)||(22621655-22621818)
chr1 (68-237)||(16363477-16363647)
chr1 (171-235)||(12011259-12011323)
chr1 (36-202)||(15811553-15811718)
chr1 (36-235)||(25959534-25959731)
chr1 (77-235)||(27116298-27116456)
chr1 (71-234)||(33192209-33192373)
chr1 (141-236)||(26022323-26022418)
chr1 (139-237)||(15630996-15631094)
chr1 (36-235)||(16114624-16114822)
chr1 (139-237)||(22426588-22426686)
chr1 (37-128)||(7881619-7881711)
chr1 (139-236)||(22665712-22665809)
chr1 (139-237)||(28009672-28009770)
chr1 (77-230)||(26101723-26101877)
chr1 (169-233)||(14780570-14780634)
chr1 (141-237)||(15542381-15542477)
chr1 (139-222)||(21450693-21450776)
chr1 (183-237)||(18098321-18098375)
chr1 (139-237)||(18527569-18527667)
chr1 (76-237)||(17543188-17543348)
chr1 (177-237)||(16915269-16915329)
chr1 (36-188)||(18099897-18100049)
chr1 (79-222)||(22624481-22624625)
chr1 (36-242)||(15571756-15571962)
chr1 (76-237)||(18734658-18734820)
chr1 (169-235)||(18827352-18827418)
chr1 (139-201)||(20107780-20107842)
chr1 (169-237)||(16180674-16180741)
chr1 (176-235)||(7221479-7221538)
chr1 (136-231)||(17444989-17445084)
chr1 (143-237)||(18832145-18832239)
chr1 (175-237)||(27546346-27546408)
chr1 (169-234)||(21663166-21663231)
chr1 (149-234)||(24901145-24901230)
chr1 (169-222)||(26611419-26611472)
chr1 (169-201)||(25402544-25402576)
[»] scaffold0043 (1 HSPs)
scaffold0043 (39-237)||(88509-88706)
[»] chr4 (47 HSPs)
chr4 (42-242)||(5691585-5691785)
chr4 (36-240)||(25024930-25025133)
chr4 (36-240)||(9849777-9849980)
chr4 (36-239)||(20828210-20828411)
chr4 (106-236)||(19883586-19883715)
chr4 (86-234)||(16669797-16669945)
chr4 (35-126)||(5685461-5685553)
chr4 (77-237)||(14573312-14573473)
chr4 (79-233)||(18447517-18447670)
chr4 (36-128)||(26114382-26114474)
chr4 (89-239)||(11252200-11252349)
chr4 (139-237)||(7583718-7583816)
chr4 (154-237)||(17434375-17434458)
chr4 (79-237)||(1832127-1832284)
chr4 (139-237)||(10106221-10106319)
chr4 (150-239)||(23970732-23970824)
chr4 (169-237)||(9536828-9536896)
chr4 (89-237)||(17711182-17711330)
chr4 (36-100)||(19094070-19094133)
chr4 (77-235)||(9053870-9054027)
chr4 (37-235)||(10236414-10236611)
chr4 (139-222)||(15047693-15047776)
chr4 (139-222)||(15106648-15106731)
chr4 (139-237)||(15166394-15166492)
chr4 (139-237)||(18750750-18750848)
chr4 (139-237)||(19603930-19604027)
chr4 (141-235)||(22350315-22350409)
chr4 (175-236)||(19556613-19556674)
chr4 (167-236)||(25096254-25096323)
chr4 (141-237)||(16928852-16928948)
chr4 (143-218)||(17024782-17024857)
chr4 (169-232)||(19919216-19919278)
chr4 (102-239)||(12246636-12246771)
chr4 (141-235)||(17108646-17108740)
chr4 (36-237)||(23083525-23083724)
chr4 (144-237)||(9263423-9263516)
chr4 (185-237)||(19538956-19539009)
chr4 (76-127)||(22527809-22527861)
chr4 (139-242)||(17277771-17277874)
chr4 (139-237)||(10432104-10432202)
chr4 (139-237)||(17218455-17218553)
chr4 (175-237)||(17335428-17335490)
chr4 (178-235)||(12616679-12616736)
chr4 (85-234)||(13588590-13588739)
chr4 (185-237)||(19667021-19667074)
chr4 (76-126)||(17335538-17335590)
chr4 (177-237)||(22171712-22171772)
[»] chr6 (52 HSPs)
chr6 (36-237)||(23644390-23644591)
chr6 (36-237)||(22564622-22564820)
chr6 (36-234)||(9339054-9339250)
chr6 (36-237)||(22569679-22569878)
chr6 (36-237)||(21079794-21079993)
chr6 (36-237)||(9897940-9898141)
chr6 (36-237)||(20080562-20080760)
chr6 (77-235)||(2588159-2588318)
chr6 (76-237)||(8038123-8038285)
chr6 (139-237)||(8246539-8246637)
chr6 (73-237)||(3358003-3358166)
chr6 (139-237)||(14076322-14076420)
chr6 (44-128)||(15600594-15600679)
chr6 (76-237)||(21932335-21932498)
chr6 (169-237)||(14077993-14078061)
chr6 (77-236)||(9507344-9507503)
chr6 (36-235)||(19246100-19246298)
chr6 (138-234)||(6629050-6629147)
chr6 (36-97)||(8246450-8246510)
chr6 (140-237)||(24388049-24388145)
chr6 (139-235)||(1636560-1636656)
chr6 (91-235)||(9848041-9848185)
chr6 (141-237)||(14641560-14641656)
chr6 (36-237)||(21060477-21060676)
chr6 (37-229)||(30356088-30356279)
chr6 (70-237)||(24389220-24389387)
chr6 (139-237)||(31878926-31879025)
chr6 (139-237)||(24469724-24469822)
chr6 (79-229)||(32759835-32759985)
chr6 (169-237)||(9519688-9519756)
chr6 (89-237)||(17822097-17822246)
chr6 (169-237)||(18171326-18171394)
chr6 (91-202)||(9840904-9841015)
chr6 (37-100)||(21687339-21687401)
chr6 (139-218)||(23230058-23230136)
chr6 (169-235)||(8066608-8066674)
chr6 (139-201)||(14723610-14723672)
chr6 (167-237)||(22845924-22845994)
chr6 (139-236)||(23087181-23087279)
chr6 (167-237)||(24479978-24480048)
chr6 (139-237)||(19594049-19594148)
chr6 (85-128)||(10505043-10505087)
chr6 (169-237)||(21152564-21152632)
chr6 (177-237)||(23005319-23005379)
chr6 (177-237)||(23782987-23783047)
chr6 (85-128)||(27961086-27961130)
chr6 (175-222)||(11136880-11136927)
chr6 (79-128)||(10822103-10822152)
chr6 (91-128)||(20404191-20404229)
chr6 (176-237)||(16175742-16175803)
chr6 (79-126)||(22411587-22411636)
chr6 (139-235)||(17379525-17379620)
[»] chr8 (54 HSPs)
chr8 (39-240)||(14271668-14271868)
chr8 (36-237)||(22501658-22501857)
chr8 (36-237)||(24381399-24381599)
chr8 (36-237)||(19784853-19785053)
chr8 (36-237)||(30117731-30117931)
chr8 (36-237)||(24380426-24380626)
chr8 (36-237)||(7984939-7985141)
chr8 (77-238)||(30832802-30832964)
chr8 (36-236)||(17835367-17835566)
chr8 (38-237)||(4007224-4007423)
chr8 (140-235)||(37527101-37527196)
chr8 (89-237)||(24851017-24851165)
chr8 (36-202)||(2638543-2638709)
chr8 (36-235)||(15058579-15058776)
chr8 (169-237)||(25481578-25481646)
chr8 (170-237)||(6886625-6886692)
chr8 (36-237)||(25180794-25180995)
chr8 (87-237)||(28904040-28904190)
chr8 (150-215)||(34499172-34499237)
chr8 (79-237)||(19265687-19265846)
chr8 (167-236)||(13833677-13833747)
chr8 (139-237)||(20400260-20400358)
chr8 (36-237)||(5856604-5856803)
chr8 (89-237)||(15176505-15176652)
chr8 (85-231)||(17980665-17980811)
chr8 (139-237)||(18446932-18447032)
chr8 (169-238)||(24109106-24109175)
chr8 (136-237)||(24908827-24908928)
chr8 (136-237)||(24911048-24911149)
chr8 (177-237)||(13313344-13313404)
chr8 (76-237)||(14076986-14077146)
chr8 (89-237)||(24388445-24388592)
chr8 (177-237)||(26139752-26139812)
chr8 (169-235)||(24090953-24091019)
chr8 (95-234)||(24518663-24518801)
chr8 (36-185)||(30487670-30487817)
chr8 (139-199)||(21316709-21316769)
chr8 (179-237)||(24583244-24583302)
chr8 (169-235)||(28621560-28621626)
chr8 (140-201)||(26888413-26888474)
chr8 (169-237)||(19791349-19791417)
chr8 (177-237)||(24389720-24389780)
chr8 (77-128)||(28858700-28858752)
chr8 (139-237)||(17510832-17510928)
chr8 (177-232)||(18007500-18007555)
chr8 (169-222)||(17100294-17100347)
chr8 (84-124)||(24908771-24908812)
chr8 (84-124)||(24910992-24911033)
chr8 (89-125)||(26829650-26829687)
chr8 (76-128)||(35861642-35861695)
chr8 (149-217)||(6286221-6286289)
chr8 (169-237)||(17998210-17998278)
chr8 (169-201)||(18570485-18570517)
chr8 (76-126)||(29765575-29765627)
[»] chr3 (43 HSPs)
chr3 (36-231)||(18735349-18735543)
chr3 (36-237)||(5509893-5510093)
chr3 (39-237)||(22470475-22470675)
chr3 (35-237)||(22246820-22247021)
chr3 (36-237)||(13906656-13906856)
chr3 (72-237)||(3114782-3114947)
chr3 (139-237)||(8448728-8448826)
chr3 (36-202)||(6075795-6075960)
chr3 (76-237)||(20886732-20886892)
chr3 (36-237)||(17134915-17135116)
chr3 (140-237)||(27073879-27073976)
chr3 (36-237)||(16223315-16223515)
chr3 (139-237)||(3429297-3429395)
chr3 (39-218)||(19387942-19388120)
chr3 (89-235)||(31283978-31284125)
chr3 (79-235)||(28326209-28326364)
chr3 (139-237)||(8145174-8145272)
chr3 (169-237)||(27412732-27412800)
chr3 (139-242)||(18535696-18535799)
chr3 (167-237)||(7805696-7805766)
chr3 (143-233)||(19533712-19533802)
chr3 (36-126)||(20891825-20891916)
chr3 (177-237)||(18457184-18457244)
chr3 (36-237)||(819919-820118)
chr3 (139-237)||(14977732-14977830)
chr3 (169-237)||(8765630-8765698)
chr3 (177-237)||(8770528-8770588)
chr3 (139-237)||(12372405-12372503)
chr3 (139-237)||(16228417-16228515)
chr3 (36-127)||(27853096-27853188)
chr3 (139-238)||(16242265-16242362)
chr3 (139-238)||(19909101-19909200)
chr3 (76-201)||(2166143-2166270)
chr3 (161-239)||(27852674-27852752)
chr3 (149-238)||(18747742-18747831)
chr3 (36-128)||(23054757-23054849)
chr3 (85-128)||(3002929-3002973)
chr3 (76-126)||(8115467-8115519)
chr3 (139-235)||(12771277-12771373)
chr3 (141-237)||(13938919-13939015)
chr3 (169-237)||(19170010-19170078)
chr3 (181-237)||(19170214-19170270)
chr3 (177-237)||(20431436-20431496)
[»] chr2 (49 HSPs)
chr2 (36-237)||(17891554-17891755)
chr2 (38-239)||(27420898-27421097)
chr2 (37-237)||(18553122-18553313)
chr2 (79-237)||(18970846-18971003)
chr2 (39-237)||(22627213-22627408)
chr2 (36-237)||(18545095-18545296)
chr2 (95-237)||(28930156-28930298)
chr2 (77-239)||(29717429-29717588)
chr2 (139-239)||(29850942-29851042)
chr2 (36-238)||(23010115-23010317)
chr2 (79-237)||(25532101-25532260)
chr2 (89-237)||(25537432-25537580)
chr2 (76-235)||(26651712-26651869)
chr2 (140-237)||(18758228-18758325)
chr2 (77-242)||(34579841-34580007)
chr2 (77-242)||(34585590-34585756)
chr2 (139-242)||(11464386-11464488)
chr2 (79-222)||(32141479-32141622)
chr2 (181-234)||(16257828-16257881)
chr2 (139-236)||(32086974-32087071)
chr2 (89-237)||(17350854-17351002)
chr2 (139-235)||(25886266-25886362)
chr2 (36-100)||(29032705-29032768)
chr2 (36-124)||(19198662-19198749)
chr2 (89-222)||(27907610-27907743)
chr2 (188-237)||(35680173-35680222)
chr2 (141-233)||(29834793-29834885)
chr2 (176-237)||(24086379-24086440)
chr2 (140-201)||(27540374-27540435)
chr2 (169-237)||(28918144-28918212)
chr2 (175-222)||(25196573-25196620)
chr2 (156-202)||(18458473-18458519)
chr2 (140-234)||(22568981-22569075)
chr2 (79-126)||(25922470-25922519)
chr2 (169-237)||(38796135-38796206)
chr2 (169-201)||(17199482-17199514)
chr2 (136-232)||(45572444-45572540)
chr2 (136-232)||(45576111-45576207)
chr2 (136-232)||(45579778-45579874)
chr2 (136-232)||(45583445-45583541)
chr2 (136-232)||(45587112-45587208)
chr2 (136-232)||(45590779-45590875)
chr2 (136-232)||(45594446-45594542)
chr2 (136-232)||(45598113-45598209)
chr2 (136-232)||(45601780-45601876)
chr2 (136-232)||(45605447-45605543)
chr2 (136-232)||(45609114-45609210)
chr2 (136-232)||(45612781-45612877)
chr2 (136-232)||(45616448-45616544)
[»] scaffold0024 (1 HSPs)
scaffold0024 (36-237)||(41162-41363)
[»] scaffold0451 (2 HSPs)
scaffold0451 (36-237)||(10166-10365)
scaffold0451 (169-237)||(5686-5754)
[»] scaffold0005 (1 HSPs)
scaffold0005 (77-237)||(243903-244064)
[»] scaffold1017 (1 HSPs)
scaffold1017 (136-232)||(522-618)
[»] scaffold0072 (1 HSPs)
scaffold0072 (73-237)||(38151-38315)
[»] scaffold0019 (1 HSPs)
scaffold0019 (139-237)||(182584-182682)
[»] scaffold0015 (2 HSPs)
scaffold0015 (39-128)||(202013-202102)
scaffold0015 (170-202)||(201940-201972)
[»] scaffold0386 (3 HSPs)
scaffold0386 (139-237)||(4945-5041)
scaffold0386 (36-128)||(13655-13748)
scaffold0386 (60-100)||(9320-9360)
[»] scaffold0032 (1 HSPs)
scaffold0032 (139-237)||(92901-92999)
[»] scaffold0360 (1 HSPs)
scaffold0360 (76-232)||(16545-16700)
[»] scaffold0094 (1 HSPs)
scaffold0094 (76-235)||(12094-12252)
[»] scaffold0086 (2 HSPs)
scaffold0086 (85-237)||(11965-12116)
scaffold0086 (209-237)||(12859-12887)
[»] scaffold0016 (1 HSPs)
scaffold0016 (175-237)||(4786-4848)
[»] scaffold0056 (1 HSPs)
scaffold0056 (144-237)||(22967-23060)
[»] scaffold0014 (1 HSPs)
scaffold0014 (177-238)||(192086-192147)
[»] scaffold0115 (1 HSPs)
scaffold0115 (139-194)||(36247-36302)
[»] scaffold0111 (1 HSPs)
scaffold0111 (177-235)||(21404-21462)


Alignment Details
Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 35 - 237
Target Start/End: Original strand, 10418379 - 10418581
Alignment:
Q  35 tctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||         
T  10418379 tctcttgaatcttgaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatttgcatgatttcttcgtgaattacataaaaa 10418478  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  10418479 a-catcctaaaatttctatgtttcgggaagaacataattatagactcaaatatagaaaacattacaaatgttccgaaatcataggcaattgctctaatac 10418577  T
Q  234 tcct 237  Q
    ||||    
T  10418578 tcct 10418581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 37 - 235
Target Start/End: Original strand, 144801 - 144998
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacatnnnnnn 134  Q
    ||||||||||||  |||||||||| |||| ||||||||| |||||||||||||||| | |||||||||| ||||||||| ||||||||||||||          
T  144801 tcttgaatcttctttcttcatcttaccaa-ggaccacatgaatcttcggatgtctttgttttgccgatttgcatgatttgttcgtgaattacataaaaaa 144899  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     ||||||| |||| ||||||||||| ||||||||||||| | ||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||    
T  144900 -catcctacaattgctatgtttcgggaagaacataattacatactcaaatatagaaaacattataaa-ttcccgaaatcataggcaattgctctaatact 144997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 237
Target Start/End: Complemental strand, 5221240 - 5221041
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaatt-acatnnnnnn 134  Q
    ||||||||||||| ||| ||||||||||| || |  || |||||||| ||||||||||||||||||| ||||||||||||||||||||| |||           
T  5221240 tcttgaatcttcattctacatctttccaa-ggtcttcacaaatcttcagatgtcttgctttgccgatatgcatgatttcttcgtgaatttaca--acaaa 5221144  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     |||||||||||| ||||||||||  ||||| | |||||||||||||||||||||||||||||||||| |  |||||||||| ||||||| |||| ||||    
T  5221143 acatcctaaaattgctatgtttcgagaagaatagaattatagactcaaatatagaaaacattacaaatgtaccgaaatcataagcaattgttctagtact 5221044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 9767608 - 9767809
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga--ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||||||| || || ||||||||||||| |||||||||||||||| || |  |||| |||||||||||||||||||||         
T  9767608 ctcttgaatcttcattcttcatctt-cctaatgaccacataaatcctcggatgtcttgcttttcctaagttgcttgatttcttcgtgaattacat-taag 9767705  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || |||||| || |||| |||||  ||||| | ||||| |||||||||||||||||||| || |||| | ||||||||||||||||||| ||||||||    
T  9767706 aacaccctaaagttgctatatttcgagaagaatagaattacagactcaaatatagaaaacaatataaatgtctcgaaatcataggcaattgatctaatac 9767805  T
Q  234 tcct 237  Q
    ||||    
T  9767806 tcct 9767809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 15171036 - 15170872
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||||| |||| |||||| |||||||||||| |||||||||||||||| || |||||||||||||||||||||||          
T  15171036 ctcttgaatcttcattcttcatcttcccaa-ggaccaaataaatcttcggttgtcttgctttgccgatttacatgatttcttcgtgaattacat-ccaaa 15170939  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaat 202  Q
     |||||||||||| |||| ||| || ||||||| ||||| ||| ||||||||||||||||||||||||    
T  15170938 acatcctaaaattactatattttgggaagaacaaaattaaaga-tcaaatatagaaaacattacaaat 15170872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 232
Target Start/End: Complemental strand, 6039570 - 6039375
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||| ||||| |||| ||||  || ||||||| |||||| || |||||||||| ||||||| || ||||||||||||||          
T  6039570 ctcttgaatcttcattctttatcttcccaa-ggacttcacaaatctttggatgtattactttgccgatatgcatgagtttttcgtgaattacatcaaaat 6039472  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
     ||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||||||| |  | | ||||| | ||||||||||||||    
T  6039471 -catcctaaaatttctatctttcgggaagaacataattacagactcaaatatagaaaactttacaaatgtcccaatatcatcgacaattgctctaata 6039375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 242
Target Start/End: Original strand, 3736162 - 3736365
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| || |||  ||||||||| |||||||||||         
T  3736162 ctcttgaatcttcattcttcatctt-cctaaggaccacataaatcttcggatgtcttgctttgcctgatttgattgatttctttgtgaattacat-caat 3736259  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| |  |||||||  || || | ||||| | |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||     
T  3736260 aacaccctaaaattgc--tgtttcgagaaaaatagaattacatactcaaatatagaaaa-attacaaatgtctcgaaatcataggcaattgatctaataa 3736356  T
Q  234 tcctttgct 242  Q
    |||| ||||    
T  3736357 tcctatgct 3736365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 1589064 - 1589263
Alignment:
Q  39 ttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc--ga-ttgcatgatttcttcgtgaattacatnnnnnnn 135  Q
    ||||||||||| |||||||||| |||| |||||||||||||||| ||||||||| |||| ||  || |||| |||||||||||||||||||||           
T  1589064 ttgaatcttcattcttcatcttcccaa-ggaccacataaatctttggatgtcttacttttccctgatttgcttgatttcttcgtgaattacat-caagaa 1589161  T
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    || ||||||||| |||| |||||| ||||| | ||||| | ||||||||||||| |||| ||||||| | | ||||||||| ||||||  ||||||||||    
T  1589162 caccctaaaattgctatatttcgggaagaatagaattacatactcaaatatagacaacaatacaaatgtcttgaaatcatatgcaattaatctaatactc 1589261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 21233927 - 21234127
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| ||||||||||| | ||||||  || ||||||||| |||||||||||| ||||| |||||||||||| ||||| ||||||          
T  21233927 ctcttgaatcttcattcttcatcttttc-aaggacttcaaaaatcttcgaatgtcttgcttttccgatatgcatgatttctccgtgagttacat-caaaa 21234024  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     ||||||||| || |||| ||| || ||||| | ||||||| |||||||||||||||||||||||||| |  |  |||||||| ||| | ||||||||||    
T  21234025 acatcctaaatttgctatattttgggaagaatagaattataaactcaaatatagaaaacattacaaatgtcccagaatcatagacaaattctctaatact 21234124  T
Q  235 cct 237  Q
    |||    
T  21234125 cct 21234127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 21502717 - 21502878
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||| |       || |||| |||| ||||||||||| ||||| | |||||     
T  21502717 aatcttcggatgttcttgctttgtcgatttgcatgatttcttcgtgaattacctcaaaaa-caccctagaattgctatgtttcgggaagaatagaattac 21502815  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| | ||||||||||||||||| |  |||||||||||||||||| ||||||||||||    
T  21502816 agactcaagtctagaaaacattacaaatgtcccgaaatcataggcaattgttctaatactcct 21502878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 237
Target Start/End: Complemental strand, 2507035 - 2506882
Alignment:
Q  85 gatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata-gactcaa 182  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||       || |||||||||||||||||| || || || | ||||| | |||||||    
T  2507035 gatgtcttgctttgctgatttgcatgatttcttcgtgaattagatcaaaa--caccctaaaatttctatgttttgggaataatagaattacatgactcaa 2506938  T
Q  183 atatagaaaacattacaaatttttcg-aaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||| | ||| |||||||| ||||||| ||||||||||||    
T  2506937 atatagaaaacattacaaatgtctcgaaaatcataagcaattgttctaatactcct 2506882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 6018181 - 6018382
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    ||||||| |||||| ||||||| ||||| |||||||||||||||||||  ||||||| ||||||| || |||| |||||||||||||||||||||         
T  6018181 ctcttgactcttcattcttcat-tttcctaaggaccacataaatcttcaaatgtcttactttgcctgatttgcttgatttcttcgtgaattacatcaaaa 6018279  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
       | |||||||||  ||||||| || || || ||||||| |  ||||||||||||||||| ||||||| |    |||||||||||||||  ||||||||    
T  6018280 at-accctaaaattgttatgttttgggaaaaatataattacatgctcaaatatagaaaacaatacaaatgtcctaaaatcataggcaattaatctaatac 6018378  T
Q  234 tcct 237  Q
    ||||    
T  6018379 tcct 6018382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 237
Target Start/End: Complemental strand, 8317647 - 8317514
Alignment:
Q  103 ttgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaat 202  Q
    |||||||||||||||||||||||| |       || ||| ||||| |||||||||||||| |  | ||||| |||||||||||||||||||||||||||     
T  8317647 ttgcatgatttcttcgtgaattac-ttcaaaaacaccctcaaattgctatgtttcggaaaaactagaattacagactcaaatatagaaaacattacaaaa 8317549  T
Q  203 ttttcgaaatcataggcaattgctctaatactcct 237  Q
     |  |||||||||||||||| | ||||||||||||    
T  8317548 gtcccgaaatcataggcaatcgttctaatactcct 8317514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 3189601 - 3189518
Alignment:
Q  46 ttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattacat 128  Q
    |||| |||||||||| || |||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  3189601 ttcactcttcatctt-ccgaaggaccacataaatcttcggatgtcttgctttgcctgagttgcgtgatttcttcgtgaattacat 3189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 242
Target Start/End: Complemental strand, 23128095 - 23127962
Alignment:
Q  108 tgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttc 207  Q
    |||||||||||||||||||||       || ||||||||| ||||||||||| |||||   ||||| |||||| |||||||||||| |||||||| || |    
T  23128095 tgatttcttcgtgaattacatcaagaa-caccctaaaattgctatgtttcgggaagaatggaattacagactcgaatatagaaaaccttacaaatgttcc 23127997  T
Q  208 gaaatcataggcaattgctctaatactcctttgct 242  Q
     |||||||| ||||||| |||||||||||| ||||    
T  23127996 aaaatcataagcaattgatctaatactcctctgct 23127962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 1586018 - 1586107
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattac 126  Q
    ||||| ||||| ||||||| |||| |||| ||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  1586018 tcttggatcttgaatcttcgtcttcccaa-ggatcacgtaaatcttcggatgtcttgatttgccgatttgcatgatttcttcgtgaattac 1586107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 8310010 - 8309947
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc 100  Q
    |||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||||||    
T  8310010 ctcttgaatcttcattcttcatcttcccaa-ggtccacataaatcttcggatgtcttgctttgcc 8309947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 10332228 - 10332428
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||| ||||| ||||||  |  ||  ||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||          
T  10332228 ctcttgaatcttcattcttgatcttcccaaagt-cttcactaatcttcagatgtcttgttttgccgatatgcatgatttcttcatgaattacat-caaaa 10332325  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     ||||||| ||||  |||||||||| || || | || || || ||| ||||||||||||||||||||| |  | |||| ||| ||||||| |||||||||    
T  10332326 acatcctagaattgatatgtttcgggaaaaatagaactacaggctcgaatatagaaaacattacaaatgtcccaaaatgataagcaattgatctaatact 10332425  T
Q  235 cct 237  Q
    |||    
T  10332426 cct 10332428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 233
Target Start/End: Original strand, 9918096 - 9918187
Alignment:
Q  142 aaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
    |||||| |||| |||||| ||||| || |||| |||||||||||||||||||||||||||| |  |||| |||||  |||||||||||||||    
T  9918096 aaaattgctatatttcgggaagaatatgattagagactcaaatatagaaaacattacaaatctcccgaagtcataaacaattgctctaatac 9918187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 233
Target Start/End: Original strand, 9926008 - 9926099
Alignment:
Q  142 aaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
    |||||| |||| |||||| ||||| || |||| |||||||||||||||||||||||||||| |  |||| |||||  |||||||||||||||    
T  9926008 aaaattgctatatttcgggaagaatatgattagagactcaaatatagaaaacattacaaatctcccgaagtcataaacaattgctctaatac 9926099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 21707509 - 21707418
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaa 230  Q
    |||| |||| ||||||||| | ||||| | ||||| ||| |||||||||||||||||||||||| | ||||| ||||||||||||| |||||    
T  21707509 cctagaattgctatgtttcaggaagaatagaattacagattcaaatatagaaaacattacaaatgtctcgaactcataggcaattgttctaa 21707418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 8052599 - 8052501
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  | ||||| | |||||||||||||||||||||||||  || ||||||||||||||||   ||||||||||||    
T  8052599 cctaaaattgctatgtttcgggaaaactaaaattacaaactcaaatatagaaaacattacaaaagttccgaaatcataggcaatcattctaatactcct 8052501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 8977641 - 8977543
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  | ||||| |||||||||||||||||||||||||||  |   ||||||||||||| ||| ||||||||||||    
T  8977641 cctaaaattgctatgtttcgggaaaattagaattacagactcaaatatagaaaacattacaaaagtcctgaaatcataggcagttgttctaatactcct 8977543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 20577434 - 20577528
Alignment:
Q  143 aaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| ||||||||||| || |  | ||||| || ||||||||||||||||||||||||  | ||||||||||||||||| | ||||||||||||    
T  20577434 aaattgctatgtttcgggaatactagaattacaggctcaaatatagaaaacattacaaaagtctcgaaatcataggcaatcgttctaatactcct 20577528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 5471883 - 5471810
Alignment:
Q  161 aagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    ||||| ||||||| |||||||||||||||||||||||||||| |  |||||| ||| ||||||| |||||||||    
T  5471883 aagaatataattacagactcaaatatagaaaacattacaaatatcccgaaattataagcaattgttctaatact 5471810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 5047067 - 5046909
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    |||| ||| ||||||||| |||||||||| ||||||||||||||||||||||||       ||  |||||||| ||||||||||| ||||| || |  ||    
T  5047067 aaattttcagatgtcttgatttgccgatttgcatgatttcttcgtgaattacat--caaaacactctaaaattgctatgtttcgggaagaaaatta-cat 5046971  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    | |||||||||||||||||||||||||| |  |||| ||||| ||||||  ||||||| ||||    
T  5046970 a-actcaaatatagaaaacattacaaatgtcccgaattcataagcaattattctaataatcct 5046909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 23173826 - 23173758
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| |||||||||||||||||||||||||  || | ||||||||| |||||| ||||||||||||    
T  23173826 aattatatactcaaatatagaaaacattacaaaagttccaaaatcatagacaattgttctaatactcct 23173758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 3585693 - 3585610
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    ||||||||| |||||||||||||| |  | ||||| ||||||||||||||||||||||| |||  |  ||||||||||||||||    
T  3585693 cctaaaattgctatgtttcggaaaaactagaattacagactcaaatatagaaaacattataaaagtcacgaaatcataggcaat 3585610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 5485455 - 5485537
Alignment:
Q  42 aatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaatt 124  Q
    |||||||| ||||||||||||| ||||||  || |||||||| |||||||||||| |||||| |||||| ||||||||||||||    
T  5485455 aatcttcattcttcatctttcc-aaggacttcacaaatcttcagatgtcttgcttcgccgatatgcatgttttcttcgtgaatt 5485537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 19154663 - 19154753
Alignment:
Q  39 ttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatga-tttcttcgtgaattacat 128  Q
    ||||||||| ||||||| |||| |||| |||||||||||||||| ||||||||| ||||||| | |||||||| ||| ||||||||||||||    
T  19154663 ttgaatcttaaatcttcgtcttcccaa-ggaccacataaatctttggatgtcttactttgccaatttgcatgatttttttcgtgaattacat 19154753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 20754062 - 20754152
Alignment:
Q  39 ttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatga-tttcttcgtgaattacat 128  Q
    ||||||||| ||||||| |||| |||| |||||||||||||||| ||||||||| ||||||| | |||||||| ||| ||||||||||||||    
T  20754062 ttgaatcttaaatcttcgtcttcccaa-ggaccacataaatctttggatgtcttactttgccaatttgcatgatttttttcgtgaattacat 20754152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 23897177 - 23897264
Alignment:
Q  150 tatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||| | ||||| ||||| ||||||| |||| ||||||||| |   ||||||||||||||||| | ||||||||||    
T  23897177 tatgtttcggaaagaatagaattacagactaaaatataaaaaatattacaaatgtcctgaaatcataggcaattgatataatactcct 23897264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 4450597 - 4450695
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| |||||||| || || |  | |||||||| ||||||||||||||||||||||||  |  |||||||| ||||||| | ||||||||||||    
T  4450597 cctaaaattgctatgttttgggaaaactagaattatagtctcaaatatagaaaacattacaaaagtcccgaaatcacaggcaatcgttctaatactcct 4450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 9134670 - 9134796
Alignment:
Q  76 aaatcttcggatgt-cttgctttgccgattg-catgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataatta 173  Q
    |||||||||||||| |||| ||||||||||  ||||||||||||||||||||| |        ||||||||||| ||||||||||| || |  |||||||    
T  9134670 aaatcttcggatgttcttgatttgccgatttacatgatttcttcgtgaattacttcaataaa-atcctaaaattgctatgtttcgggaaaactataatta 9134768  T
Q  174 tagactcaaatatagaaaacattacaaa 201  Q
     | |||||||||||||||| ||||||||    
T  9134769 catactcaaatatagaaaaaattacaaa 9134796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 11578810 - 11578712
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||  |||||||||| || |  | ||||||||||||||||||| |||| ||||||||  |   ||||||||||| ||||||||||||||||||    
T  11578810 cctaaaattgttatgtttcgggaaaactagaattatagactcaaatataaaaaatattacaaaagtcctgaaatcataggtaattgctctaatactcct 11578712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 25692712 - 25692814
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||||||  |||||||||| || |  | ||||| |||||||||||||||||| ||||||||  || ||| ||||||| |||| | ||||||||||    
T  25692712 catcctaaaattattatgtttcgggaaaactagaattacagactcaaatatagaaaatattacaaaagttccgatatcatagacaatcgttctaatactc 25692811  T
Q  236 ctt 238  Q
    |||    
T  25692812 ctt 25692814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 237
Target Start/End: Original strand, 9978161 - 9978309
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| |||||||||||||||||||||| |       |  ||| ||||| ||||||||| |||| |  | ||||| |||||||||||||    
T  9978161 tcttgatttgccgatttgcatgatttcttcgtgaattactttaaaacccc-cctcaaattgctatgtttcagaaaaactagaattacagactcaaatata 9978259  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||  |  | |||||||||||||  | ||||||||||||    
T  9978260 gaaaacattacaaaagtcccaaaatcataggcaaccgttctaatactcct 9978309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 10611639 - 10611735
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||| |||||||| || || |  | ||||| |||||||||||||||||||||||||||  |  || ||||||||||||| | ||||||||||    
T  10611639 cctaaaattgctatgtttagggaaaactagaattagagactcaaatatagaaaacattacaaaagtcccgtaatcataggcaatcgttctaatactc 10611735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 5237098 - 5236939
Alignment:
Q  79 tcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatag 176  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||||||| |       |  ||||||||| ||||||| ||| || |  | ||||| ||    
T  5237098 tcttcggatgttcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaacccc-cctaaaattgctatgttacgggaaaactagaattacag 5237000  T
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| |||||||||||||||  |  | |||||||||| ||||| |||||| |||||    
T  5236999 actcaaatacagaaaacattacaaaagtcccaaaatcataggaaattgttctaatcctcct 5236939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 234
Target Start/End: Original strand, 9288772 - 9288931
Alignment:
Q  76 aaatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataatta 173  Q
    |||||||| ||||| ||| ||||| ||||| |||||||||||||| |||||||||        ||||||||||| |||||||||   ||||| | |||||    
T  9288772 aaatcttcagatgttcttactttgacgatttgcatgatttcttcgcgaattacatcaaaaaa-atcctaaaattgctatgtttcaagaagaatagaatta 9288870  T
Q  174 tagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     | | |||||||||||||||||||||| | |  | ||||||||| |||||| |||||||||    
T  9288871 cataatcaaatatagaaaacattacaagtgtcacaaaatcatagacaattgttctaatact 9288931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 22468691 - 22468750
Alignment:
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    ||||||| ||||| ||||||||||||||||||||||||||||   ||||| |||||||||    
T  22468691 agactcatatatataaaacattacaaatttttcgaaatcataataaattgttctaatact 22468750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 9298593 - 9298723
Alignment:
Q  103 ttgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaat 202  Q
    |||||||||||||||| |||||||||        ||||||||||| |||||||||   ||||| | ||||| | | |||||||||||||||||||||| |    
T  9298593 ttgcatgatttcttcgcgaattacatcaaaaaa-atcctaaaattgctatgtttcaagaagaatagaattacataatcaaatatagaaaacattacaagt 9298691  T
Q  203 ttttcgaaatcataggcaattgctctaatact 234  Q
     |  | ||||||||| |||||| |||||||||    
T  9298692 gtcacaaaatcatagacaattgttctaatact 9298723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 20597526 - 20597624
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  | ||||| ||||||||||||||||||||| |||||  |   ||||||||| | ||||| ||||||||||||    
T  20597526 cctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacataacaaaagtcctgaaatcataagtaattgttctaatactcct 20597624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 2927801 - 2927898
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| ||||||||| | || |  | ||||||| |||||||||||||||||||||||||  |  |||||||||||| |||   ||||||||||||    
T  2927801 ctaaaattgctatgtttcaggaaaactagaattataaactcaaatatagaaaacattacaaaaatcccgaaatcataggtaatctttctaatactcct 2927898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 202
Target Start/End: Original strand, 7399201 - 7399327
Alignment:
Q  77 aatcttcggatgtcttgc-tttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||| |||||||| | |||||||||| |||||||||| |||| ||||||||       || ||||||||| |||||||| || ||||| |||||||     
T  7399201 aatcttctgatgtctttcctttgccgatttgcatgatttcgtcgttaattacatcaaaaa-caccctaaaattactatgttttgggaagaatataattaa 7399299  T
Q  175 agactcaaatatagaaaacattacaaat 202  Q
    | ||||||||||||||||  ||||||||    
T  7399300 aaactcaaatatagaaaatgttacaaat 7399327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 9501836 - 9501920
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtg 120  Q
    |||||||||||||| |||| ||||| |||| ||||  || |||||||| |||||||||||| ||||||  ||||||||||||||||    
T  9501836 ctcttgaatcttcattctttatcttcccaa-ggacttcacaaatcttcagatgtcttgcttagccgataagcatgatttcttcgtg 9501920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 10585358 - 10585257
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    |||||||||  ||||||||||||| || | ||||| | ||| | || ||||||| ||||||||| |  |||||||||||| |||||  ||||||||||||    
T  10585358 cctaaaattgttatgtttcggaaaaaaaagaattacatacttagatgtagaaaatattacaaatctcccgaaatcataggaaattgtcctaatactcctt 10585259  T
Q  239 tg 240  Q
    ||    
T  10585258 tg 10585257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 1586155 - 1586215
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| |||||||||||||||| |   |||||||||| ||||||||||||| |||||    
T  1586155 actcaaataaagaaaacattacaaatgtcctgaaatcatagacaattgctctaatgctcct 1586215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 11804627 - 11804719
Alignment:
Q  142 aaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    |||||| ||||||||||| || |  | ||||| | |||||||||||||||||||||||||  |   ||||||||||||||| | |||||||||    
T  11804627 aaaattgctatgtttcgggaaaactagaattacatactcaaatatagaaaacattacaaaagtcctgaaatcataggcaatcgttctaatact 11804719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 39270405 - 39270345
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||||||||||||| || || ||||||  |||||| | ||||||||||||    
T  39270405 actcaaatatagaaaacattacaaaattgtcaaaatcacgggcaatcgttctaatactcct 39270345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 13280715 - 13280781
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||| ||||||||||| |||||||||||||||  |  ||||||||||||||||   ||||||||||    
T  13280715 aattacagactcaaataaagaaaacattacaaaagtcccgaaatcataggcaatcattctaatactc 13280781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 14195722 - 14195772
Alignment:
Q  187 agaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| ||||||||||  |||||||||| |||| |||||||||||||||    
T  14195722 agaaaacgttacaaatttcccgaaatcataagcaactgctctaatactcct 14195772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 4988144 - 4988241
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| ||||||||||| ||||| | ||||| | | ||||||||  |||||||| ||||| |    |||||||||||||||| | ||||||||||    
T  4988144 ctaaaattgctatgtttcgggaagaatagaattacatattcaaatatgaaaaacatttcaaatgtcggaaaatcataggcaattgatataatactcct 4988241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 4992242 - 4992339
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| ||||||||||| ||||| | ||||| | | ||||||||  |||||||| ||||| |    |||||||||||||||| | ||||||||||    
T  4992242 ctaaaattgctatgtttcgggaagaatagaattacatattcaaatatgaaaaacatttcaaatgtcggaaaatcataggcaattgatataatactcct 4992339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 6046483 - 6046536
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    ||||| |||||||||||||||||||||||||||  |  | ||||||||||||||    
T  6046483 aattacagactcaaatatagaaaacattacaaaagtcccaaaatcataggcaat 6046536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 9079048 - 9078991
Alignment:
Q  144 aatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaa 201  Q
    |||| ||||||||||| || |  ||||||| | |||||||||||||||||||||||||    
T  9079048 aattgctatgtttcgggaaaactataattacaaactcaaatatagaaaacattacaaa 9078991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 9722323 - 9722472
Alignment:
Q  85 gatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata-gactcaa 182  Q
    ||||||| |||||| ||||| |||||||||||| ||| |||||||       || |||| |||| ||||||||  | ||||| || |||||| |||||||    
T  9722323 gatgtctagctttgtcgatttgcatgatttctttgtggattacatcaaaa--caccctataattgctatgtttttggaagaatattattatatgactcaa 9722420  T
Q  183 atatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    ||||||||||||| |||||| |  |||||||||| |  |||| |||||||||    
T  9722421 atatagaaaacataacaaatgtcccgaaatcataagtgattgttctaatact 9722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 15611272 - 15611112
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    |||| ||| |||||||| ||||||| || ||||||||||||||||||||||||        ||  ||||| || ||||||||||| ||||| | |||||     
T  15611272 aaattttcagatgtctttctttgccaatatgcatgatttcttcgtgaattaca--acaaaacactctaaatttgctatgtttcgggaagaatagaattac 15611175  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |  |||||||||| ||||||||| || | |  |||||||||| | ||||  ||||||||||||    
T  15611174 aagctcaaatataaaaaacattaaaactgtcccgaaatcataagaaatttatctaatactcct 15611112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 1810830 - 1810926
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||| || |||||||||| ||||| | ||||| | |||||||||||||||| | ||||||| |  | |||| ||| ||||||  ||||||||||    
T  1810830 cctaaaaattatatgtttcgggaagaatagaattacatactcaaatatagaaaataatacaaatatcccaaaataataagcaattaatctaatactc 1810926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 13287877 - 13287785
Alignment:
Q  143 aaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||| ||||||||||| || |  | ||||| | |||||||||||||||| ||||||||  |   ||||||||||||||| | ||||||||||    
T  13287877 aaattgctatgtttcgggaaaactagaattacaaactcaaatatagaaaatattacaaaagtcctgaaatcataggcaatcgttctaatactc 13287785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 26249310 - 26249258
Alignment:
Q  76 aaatcttcggatg-tcttgctttgccgatt-gcatgatttcttcgtgaattac 126  Q
    ||||||||||||| | ||| |||||||||| ||||||||||||||||||||||    
T  26249310 aaatcttcggatgattttgatttgccgatttgcatgatttcttcgtgaattac 26249258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 6e-46; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 17469831 - 17469631
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| | ||||||||  ||| ||||||||||| |||||||||| ||||||||||| ||| |||||||||||||||||||||| |          
T  17469831 ctcttgaatcttcatttttcatcttctcaa-ggaccacataattcttcggatgccttgctttgcctatttgcatgatttcttcgtgaattac-ttcaaaa 17469734  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     |||||||||||| |||||||| || ||||||||||||| | |||||||||||||||||||||||| | || | ||||||||||||||||||||||||||    
T  17469733 acatcctaaaattgctatgttttgggaagaacataattacatactcaaatatagaaaacattacaactgttccaaaatcataggcaattgctctaatact 17469634  T
Q  235 cct 237  Q
    |||    
T  17469633 cct 17469631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 237
Target Start/End: Original strand, 18227435 - 18227634
Alignment:
Q  35 tctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    ||||||||||||||| |||| ||||| ||||||  || || |||||||  ||||||||||||||| |||| ||||||||||||||||||||||||         
T  18227435 tctcttgaatcttcattcttaatcttcccaaagt-cctcacaaatctttagatgtcttgctttgctgatttgcatgatttcttcgtgaattacatctaaa 18227533  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      |||||||||||| ||| |||| || ||||||| ||||| ||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||||||    
T  18227534 --catcctaaaattgctaggttttgggaagaacagaattacagagtcaaatataaaaaacattacaaattttccgaaatc-taagcaattgctctaatac 18227630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 234
Target Start/End: Complemental strand, 24162283 - 24162087
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacatnnnnnn 134  Q
    ||||||||||||| ||||||||||| ||| | ||||| |||||||||||||||||| |||||||| ||| ||||||||| || |||||||||||          
T  24162283 tcttgaatcttcattcttcatctttacaatg-accacgtaaatcttcggatgtctttgctttgccaatttgcatgatttttt-gtgaattacatcaaaaa 24162186  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     ||||||||||||  ||||||| |  ||||||||||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||  |||||||||    
T  24162185 -catcctaaaattgttatgttttgagaagaacataattacagactcaaatatagaaaacattacaaatgttctgaaatcataggcaattattctaatact 24162087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 18832046 - 18832246
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||||||||| |||| |||| |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||          
T  18832046 ctcttgaatcttcaatcttcgtcttcccaa-ggacgacataaatcttcggatgtattgctttgccgatttgcatgatttcttcgtgaattacat-caaga 18832143  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || |||| | || || | ||| || || |   | |||| | |||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||    
T  18832144 acaccctatatttgcttttttttgggaaaactctgattacatactcaaatatagaaaacattacaaatgtcccgaaatcatagacaattgctctaatact 18832243  T
Q  235 cct 237  Q
    |||    
T  18832244 cct 18832246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 235
Target Start/End: Original strand, 18939344 - 18939542
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    ||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||          
T  18939344 ctcttgaatattcaatctttgtctttccaa-ggaccacataaatcttcggatgtcttgctttgtcgatttgcatgatttcttcgtgaattacat-caaga 18939441  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || ||||||||| |||||||| || || |   | |||| | |||| |||||| |||||| ||||||| |  |||||||||| |||||| ||||||||||    
T  18939442 acaccctaaaattgctatgttttgggaaaactctgattacatactctaatatataaaacactacaaatgtcccgaaatcatatgcaattactctaatact 18939541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 237
Target Start/End: Original strand, 24261897 - 24262091
Alignment:
Q  44 tcttcaatcttcatctttccaaaggaccacataaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcct 141  Q
    |||| ||||||||||||| ||| |||| |||||||| |||  ||||||| ||||||  |||| |  |||||||||||||||||||||       ||||||    
T  24261897 tcttgaatcttcatctttacaa-ggacaacataaatattcaaatgtctttgctttggtgatttgtgtgatttcttcgtgaattacataaaaaaacatcct 24261995  T
Q  142 aaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
     ||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||||||| ||  ||||||||||| || |  ||||||||||||    
T  24261996 taaattgctatgtttctgaaagaacataattacaaactcaaatatagaaaacattacaaatgttctgaaatcataggaaaattgtctaatactcct 24262091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 24264024 - 24263823
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-gattg-catgatttcttcgtgaattacatnnnnn 133  Q
    ||||| |||||||| |||||||||| |||| |||||||||||| ||| ||||||||||| ||||| ||||  | ||||||||| |||||||||||         
T  24264024 ctcttaaatcttcattcttcatcttcccaa-ggaccacataaagctttggatgtcttgcattgcctgattttcttgatttctttgtgaattacatcaaga 24263926  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| |||||||| |||||||| | ||||| |||||||||||||||||||||||||||| |  | |||||||||| ||||| | |||||     
T  24263925 a-caccctaaaattgctatgttttggaaagaatagaattacagactcaaatatagaaaacattacaaatgtcccaaaatcataggaaattgatataataa 24263827  T
Q  234 tcct 237  Q
    ||||    
T  24263826 tcct 24263823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 235
Target Start/End: Original strand, 34488684 - 34488879
Alignment:
Q  40 tgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-gat-tgcatgatttcttcgtgaattacatnnnnnnnca 137  Q
    |||||||||| | |||||||| |||| ||||||||||||||||| ||||||||| |||||| ||| ||| ||||||||| |||||||||||       ||    
T  34488684 tgaatcttcattattcatcttcccaa-ggaccacataaatcttcagatgtcttgttttgcctgatatgcttgatttctttgtgaattacatcaagaa-ca 34488781  T
Q  138 tcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
     ||||||||| ||||||||| | ||||| | ||||| | ||||||||||||||| || |||||||||  | ||||||| |||||||| ||||||||||    
T  34488782 ccctaaaattgctatgtttcaggaagaatacaattacatactcaaatatagaaatcaatacaaatttccctaaatcattggcaattgatctaatactc 34488879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 233
Target Start/End: Complemental strand, 22846069 - 22845872
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-gatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    ||||||||| |||| |||||||||| |||||| |  ||||||||||| | |||||||||||| || |||| || |||| ||||||||||||||||         
T  22846069 ctcttgaattttcattcttcatcttcccaaag-ataacataaatctttgaatgtcttgcttttcctgatttgcttgatctcttcgtgaattacatcaaga 22845971  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| |||||||| || ||||| | ||||| | ||||||||||||||||||||| |||| |    |||||||||||||||| ||||||||    
T  22845970 a-caccctaaaattgctatgttttgggaagaatagaattacaaactcaaatatagaaaacattataaatgtccaaaaatcataggcaattgatctaatac 22845872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 26122310 - 26122406
Alignment:
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| ||||||||| | ||||||||||||| |||| ||||||||  ||| ||||||||| |  ||||||||||| |||||||||||||||||||    
T  26122310 taaaattgctatgtttcaggaagaacataattacagacacaaatatattaaaaattacaaatgtcccgaaatcatagacaattgctctaatactcct 26122406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 24188835 - 24188922
Alignment:
Q  150 tatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| || ||||| | |||||| ||||||||||||||||||||||||| | | |||||||||||  |||||||||||||||||||    
T  24188835 tatgttttgggaagaatagaattattgactcaaatatagaaaacattacaattgtctcgaaatcatattcaattgctctaatactcct 24188922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 31600305 - 31600150
Alignment:
Q  80 cttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagac 178  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||||||||       || ||||||||| |||||||  |||||   | | |||| | ||    
T  31600305 cttcagatgtcttgctttgccgatttgcatgatttcttcgtaaattacataaaaaaacaccctaaaattgctatgttcgggaaaactc-tgattacaaac 31600207  T
Q  179 tcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||||||||| ||||||||| |  ||||||||||| ||||| |||||||||||    
T  31600206 tcaaatatagaaaatattacaaatgtcccgaaatcatagacaattactctaatactc 31600150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 25572735 - 25572542
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaa-ttacatnnnnn 133  Q
    |||||||||||||  |||||||||| |||| || |  || |||||||| |||||||||||||| |||| ||||||||||||||||||| |||||          
T  25572735 ctcttgaatcttccttcttcatcttcccaa-ggtcttcacaaatcttcagatgtcttgctttgtcgatatgcatgatttcttcgtgaatttaca--acaa 25572639  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaa 230  Q
      ||||||||||||  ||||||| || || || ||||||| ||||||||||||| ||||||  |||||| |  | |||||||| ||||||| |||||    
T  25572638 aacatcctaaaattgatatgttttgggaataatataattacagactcaaatataaaaaacaagacaaatgtccctaaatcataagcaattgttctaa 25572542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 26348306 - 26348466
Alignment:
Q  77 aatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata 175  Q
    ||||||| ||||||||| ||| || ||| ||||||||||||||||||||||||       || |||| |||| |||| |||  | ||||| | ||||| |    
T  26348306 aatcttcagatgtcttgattttccaatttgcatgatttcttcgtgaattacatcaaaac-caccctagaattgctatttttttggaagaatagaattaca 26348404  T
Q  176 gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
     |||||||||||||||||||||||||| || |||||||||| |||| || | ||||||||||    
T  26348405 tactcaaatatagaaaacattacaaatgttccgaaatcataagcaaatgttataatactcct 26348466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 15520798 - 15520891
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacat 128  Q
    |||||||||||||| |  |||||||||||| | |||||| |||||||| |||||||| |||||||||||| ||||||||||||| ||||||||||    
T  15520798 ctcttgaatcttcatttatcatctttccaa-gtaccacacaaatcttctgatgtctttgctttgccgatttgcatgatttcttcttgaattacat 15520891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 198
Target Start/End: Complemental strand, 19761814 - 19761693
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||  |||||||||||  ||||| ||||||||||||||||||||||||        |||||||||||| |||||||| || ||||| | |||||     
T  19761814 aaatcttcatatgtcttgcttaaccgatatgcatgatttcttcgtgaattaca--acaaaacatcctaaaattgctatgttttgggaagaatagaattac 19761717  T
Q  175 agactcaaatatagaaaacattac 198  Q
    ||||| ||||||||||||||||||    
T  19761716 agacttaaatatagaaaacattac 19761693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 24849740 - 24849666
Alignment:
Q  137 atcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaa 211  Q
    ||||||||||||||||||||| | ||||||| ||||| |||||||||||||||||| |||| |||| || |||||    
T  24849740 atcctaaaatttctatgtttccggaagaacaaaattacagactcaaatatagaaaatattaaaaatgttccgaaa 24849666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 19006989 - 19006921
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| |||||||||||||||||||||||||||  |  |||||||||||||||| | ||||||||||||    
T  19006989 aattacagactcaaatatagaaaacattacaaaagtcccgaaatcataggcaatcgttctaatactcct 19006921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 26253448 - 26253516
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||| ||||||||| ||||||||| ||  ||||||||| ||||||||| ||||||||||    
T  26253448 aattatagactcaagtatagaaaatattacaaatgttctgaaatcataagcaattgctttaatactcct 26253516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 19003986 - 19003840
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| |||||||||||||||||||||| |       |  |||||||||  |||||||||| || |  | ||||| |||||||||||||    
T  19003986 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaaaccc-cctaaaattgttatgtttcgggaaaactagaattacagactcaaatata 19003888  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||||||||  |   |||||||||| |||||| ||||||||||    
T  19003887 gaaaacattacaaaagtcctgaaatcatagacaattgttctaatactc 19003840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 22797549 - 22797496
Alignment:
Q  181 aaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    |||||||||||||||||||||  || |||||||||||||||| |||||||||||    
T  22797549 aaatatagaaaacattacaaaagttccgaaatcataggcaatcgctctaatact 22797496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 23266767 - 23266832
Alignment:
Q  170 attatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||| |||||||||||||||||||||||| |  |||||||||| |||||| || ||||||||    
T  23266767 attatagagtcaaatatagaaaacattacaaatgtcccgaaatcataagcaatttctgtaatactc 23266832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 26117366 - 26117459
Alignment:
Q  142 aaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||| |||||||| || ||||||| ||||| ||||||||||||| |||||||||| ||  |  |||||||||| ||||||| ||||| ||||    
T  26117366 aaaattgctatgttttgggaagaacagaattacagactcaaatataaaaaacattactaacgtcccgaaatcataagcaattgttctaaaactc 26117459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 26315109 - 26315209
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||||||| |||||| |||| || |||| ||||| | ||||||| |||||||||||||||||| | || |||||||| ||||  | ||||||||||    
T  26315109 catcctaaaattgctatgtatcgggaataacagaattacaaactcaaa-atagaaaacattacaaatgtctcaaaatcataagcaaccgttctaatactc 26315207  T
Q  236 ct 237  Q
    ||    
T  26315208 ct 26315209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 24188712 - 24188803
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattaca 127  Q
    |||||||||||||| |||||||| |||| | ||||  || |||||||| ||||| |||||||||| || |||||||| |||||||||||||||    
T  24188712 ctcttgaatcttcattcttcatc-ttcccatggacttcacaaatcttcagatgtattgctttgccaatatgcatgatgtcttcgtgaattaca 24188803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 20860265 - 20860360
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    ||||||||| ||||||||||  || |  | ||||| |||||||||||||||||| ||||||||  |  | |||||||||||||||| |||||||||    
T  20860265 cctaaaattgctatgtttcgagaaaactagaattacagactcaaatatagaaaatattacaaaagtcccaaaatcataggcaattgttctaatact 20860360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 19053027 - 19053125
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| |||||||| || || |  | ||||| ||| ||||||||||||| |||||||||  |  |||||| ||||||||||| ||||||||||||    
T  19053027 cctaaaattgctatgttttgggaaaactagaattacagagtcaaatatagaaatcattacaaaagtcccgaaattataggcaattgttctaatactcct 19053125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 23387682 - 23387620
Alignment:
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||||  |   ||||||||||||||| | ||||||||||||    
T  23387682 agactcaaatatagaaaacattacaaaagtgctgaaatcataggcaatcgttctaatactcct 23387620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 24142333 - 24142431
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  | ||||| ||||||||||||||||||| |||||||  |  |||||||||||| |||   ||||||||||||    
T  24142333 cctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaactttacaaaagtaccgaaatcataggaaatctttctaatactcct 24142431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 25920795 - 25920853
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||||||||| | |||||| | |  |||||||||||||||||||||||||||||    
T  25920795 actcaaatatagaaagccttacaattgtcccgaaatcataggcaattgctctaatactc 25920853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 26069203 - 26069273
Alignment:
Q  167 ataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| ||| || ||||||||||| ||||||||| ||  ||||||||| ||||||| ||||||||||||    
T  26069203 ataattacagattctaatatagaaaatattacaaatgttctgaaatcataagcaattgttctaatactcct 26069273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 28254754 - 28254803
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaatt 124  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  28254754 aaatcttcagatgtcttgctttgccaatttgcatgatttcttcgtgaatt 28254803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 29798975 - 29799068
Alignment:
Q  144 aatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||| |||||||| || ||||| ||||||| | ||||||||||||||||||||| |||| |  |  |||||||| |||||| ||| ||||||||    
T  29798975 aattgctatgttttgggaagaatataattacaaactcaaatatagaaaacattataaatgtcccagaatcatagacaattgttcttatactcct 29799068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 22797663 - 22797611
Alignment:
Q  76 aaatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattac 126  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  22797663 aaatcttcggatgttcttgatttgccgatttgcatgatttcttcgtgaattac 22797611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 17831658 - 17831705
Alignment:
Q  176 gactcaaatatagaaaacattacaaatttttcgaaatcataggcaatt 223  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||||    
T  17831658 gactcaaatatagaaatcattacaaatgtcccgaaatcataggcaatt 17831705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 16522070 - 16521976
Alignment:
Q  143 aaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| ||||||||||| || |  | ||||| ||| |||||||||||||||||| ||||  |  | |||||||||||||| | ||||||||||||    
T  16522070 aaattgctatgtttcgggaaaactagaattacagattcaaatatagaaaacattgcaaaagtcccaaaatcataggcaatcgttctaatactcct 16521976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 24513317 - 24513259
Alignment:
Q  179 tcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| |||||||||||||| |  | ||||||||||||| | |||||||||||||    
T  24513317 tcaaatatataaaacattacaaatgtcccaaaatcataggcaaattctctaatactcct 24513259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 23214995 - 23214898
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| ||||||||||| || |  | ||||| | | |||||||| |||||||||||||   |  ||||||||||||||||| |||| ||||||||    
T  23214995 ctaaaattgctatgtttcgggaaaactagaattacataatcaaatatggaaaacattacaatagtcccgaaatcataggcaatttctctcatactcct 23214898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 24265522 - 24265489
Alignment:
Q  67 ggaccacataaatcttcggatgtcttgctttgcc 100  Q
    ||||||||||||||||| ||||||||||||||||    
T  24265522 ggaccacataaatcttcagatgtcttgctttgcc 24265489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 24342153 - 24342120
Alignment:
Q  67 ggaccacataaatcttcggatgtcttgctttgcc 100  Q
    ||||||||||||||||| ||||||||||||||||    
T  24342153 ggaccacataaatcttcagatgtcttgctttgcc 24342120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 29987882 - 29987979
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    |||||||||  |||||||||| || |  | ||||| | ||| |||||||||||||||||||||  |  |||||||||| ||||| | |||||||||||    
T  29987882 cctaaaattgttatgtttcgggaaaactagaattacatactaaaatatagaaaacattacaaaagtcccgaaatcatatgcaatcgttctaatactcc 29987979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 15199044 - 15199012
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaa 201  Q
    ||||| |||||||||||||||||||||||||||    
T  15199044 aattacagactcaaatatagaaaacattacaaa 15199012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 21848456 - 21848650
Alignment:
Q  43 atcttcaatcttcatctttccaaaggaccacataaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcc 140  Q
    ||||| |||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||||||       || ||    
T  21848456 atcttgaatcttcatcttcccaa-ggaccacataaatcttcagatgtctttgctttgccgatttgcatgatttctttgtgaattacatcaaaaa-caccc 21848553  T
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||||| | ||||||||||| ||||||  ||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||    
T  21848554 taaaatttctatgtttcaggaagaacataataatagacctaaatatagaaaacgttacaaatgtgtcgaaatcataagcaattgctctaatactcct 21848650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 236
Target Start/End: Complemental strand, 15527069 - 15526870
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnn 134  Q
    ||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||||||           
T  15527069 ctcttgagtctttaatcttcgtcttcccaa-ggaccacataaatcttcggatgtcttactttgccaatttgcatgatttctttgtgaattaca-acaaga 15526972  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     |||||||||||| ||||||||| | || |   |||||| ||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||||||    
T  15526971 acatcctaaaattgctatgtttcaggaaaactctaattacagactaaaatatagaaaacattacaaatgtctcgaaatcataggcaattactctaatact 15526872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 242
Target Start/End: Original strand, 24282825 - 24283031
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc--gattgcatgatttcttcgtgaattacatnnnnn 133  Q
    ||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||  | |||| |||||||||||||||||||||         
T  24282825 ctcttgaatattcattcttcatcttcccaa-ggaccacataaatcttcggatgtcttgctttgcctggtttgcttgatttcttcgtgaattacat-caag 24282922  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| ||||| ||||| ||||| | ||||| |||| |||||||||||||||||| ||| ||   ||||| ||||| ||||| ||||||||    
T  24282923 aacaccctaaaattgctatggttcgggaagaatagaattacagacacaaatatagaaaacattaaaaaattcctgaaattataggaaattgatctaatac 24283022  T
Q  234 tcctttgct 242  Q
    |||| ||||    
T  24283023 tcctctgct 24283031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 26647629 - 26647430
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgcttt-gccgattgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||          
T  26647629 ctcttgaatcttgaatcttcgtcttcccaa-ggaccacataaatcttcggatgtcttgctttagcaatttgcatgatttcttcgtgaattacat-aatga 26647532  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || | ||||||| ||||| ||||| || |   | |||| ||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||    
T  26647531 acaccttaaaattgctatgattcgggaaaactctgattacagactcaaatatagaaaacattacaaatgcctcgaaatcataggc-attgctctaatact 26647433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 35133708 - 35133908
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    ||||||||| |||||||||| ||||| ||| |||||||| ||||||| |||||||||||||||| || || |||||||||||||||||||||||          
T  35133708 ctcttgaatattcaatcttcttcttttcaa-ggaccacaaaaatctttggatgtcttgctttgctgattttcatgatttcttcgtgaattacat-caaga 35133805  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || ||||||||| ||||||||| |||| |   | |||| | |||||||||||||||||||||||||| || | ||||| ||||||||| || |||||||    
T  35133806 acaccctaaaattgctatgtttcagaaaaattctgattacaaactcaaatatagaaaacattacaaatgttccaaaatcgtaggcaattactttaatact 35133905  T
Q  235 cct 237  Q
    |||    
T  35133906 cct 35133908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 237
Target Start/End: Complemental strand, 22626425 - 22626227
Alignment:
Q  38 cttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnnnc 136  Q
    |||||||||||||||||| |||| |||| ||||||||||||| |||| ||||||| ||||||||| ||||||||| | ||||||||||||||       |    
T  22626425 cttgaatcttcaatcttcgtcttcccaa-ggaccacataaattttcgaatgtcttactttgccgatttgcatgatcttttcgtgaattacat-caagaac 22626328  T
Q  137 atcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    | ||||||||| | ||||||| | || |   | |||| ||||||||||||||||||||||||||||||  | |||||||||| || | ||||||||||||    
T  22626327 accctaaaattgccatgtttcaggaaaactctgattacagactcaaatatagaaaacattacaaatttcccaaaatcataggtaaattctctaatactcc 22626228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 60 - 234
Target Start/End: Original strand, 44796964 - 44797138
Alignment:
Q  60 ttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcg 158  Q
    |||| ||||||||||||||||||| ||||||||| |||  ||||| |||||| |||||||||||||||||       || ||||||||| ||||||||||    
T  44796964 ttcccaaggaccacataaatcttcagatgtcttggtttttcgatttgcatgacttcttcgtgaattacatcaagaa-caccctaaaattactatgtttcg 44797062  T
Q  159 gaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    | || |   | |||| ||||||||||||| |||||||||||||| | | |||||||||||||||| ||||||||||    
T  44797063 ggaaaactctgattacagactcaaatataaaaaacattacaaatgtcttgaaatcataggcaattactctaatact 44797138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 234
Target Start/End: Complemental strand, 9783253 - 9783055
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-gatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||||||||| || |||| ||   ||||||| |||| ||||||         
T  9783253 ctcttgaaccttcatttttcatcttcccaa-ggaccacataaatcttcggatgtcttgctttacctgatttgctctatttcttagtgatttacatcaaga 9783155  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || | | ||||||||||||||| | ||||| | ||||| |||||||||||||||||| |||||| || || |||||| ||||||||||||||||||||    
T  9783154 a-caccattaaatttctatgtttcaggaagaatagaattacagactcaaatatagaaaatattacatatgttccgaaataataggcaattgctctaatac 9783056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 236
Target Start/End: Complemental strand, 14235515 - 14235358
Alignment:
Q  79 tcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata-g 176  Q
    ||||| ||||||||| |||||| ||| ||||||||||||||||||||||||       || ||||||||| ||||||||||| || || ||||||| | |    
T  14235515 tcttcagatgtcttgttttgccaatttgcatgatttcttcgtgaattacatcaaaa--caccctaaaattgctatgtttcgggaataatataattacatg 14235418  T
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    |||||||||||||||||||||||||| |  | |||||||| ||||||| |||||||||||    
T  14235417 actcaaatatagaaaacattacaaatgtcccaaaatcataagcaattggtctaatactcc 14235358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 237
Target Start/End: Complemental strand, 23035191 - 23034993
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnnn 135  Q
    ||||||||||| ||||||  |||| || |||||||||||||||||| |||||||||||||||| || |||||||||||||||||| |||||||           
T  23035191 tcttgaatcttgaatctttgtctt-cctaaggaccacataaatctttggatgtcttgctttgctgatttgcatgatttcttcgtg-attacat-caagaa 23035095  T
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    || |||||||||  |||||||||| || |   | |||| |||||||||||||||||||||||||||| |    |||||||| |||| | |||||||||||    
T  23035094 caccctaaaattggtatgtttcgggaaaactctgattacagactcaaatatagaaaacattacaaatatcctaaaatcatatgcaactactctaatactc 23034995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 22621655 - 22621818
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnn-catcctaaaatttctatgtttcggaaagaacataatta 173  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||        ||||||| ||||  |||||||||| |||||  ||||||    
T  22621655 aatcttcggatgttcttgctttgccaatttgcatgatttcttcgtgaattacatcaaaaacacatcctagaattggtatgtttcgggaagaatgtaatta 22621754  T
Q  174 tagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
      ||||| |||| ||||||||||||||||||   ||||||||||||||||| |||||| |||||    
T  22621755 ccgactcgaataaagaaaacattacaaatttcctgaaatcataggcaattgatctaattctcct 22621818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 237
Target Start/End: Original strand, 16363477 - 16363647
Alignment:
Q  68 gaccacataaatcttcggatgtcttgctttgcc-gattg-catgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaa 165  Q
    ||||||||||||||| ||||||||||||||||| ||||  | |||||| ||||||||||||||       || ||||||| |   ||||||||| |||||    
T  16363477 gaccacataaatctttggatgtcttgctttgcctgatttacttgatttattcgtgaattacatcaaaaa-caccctaaaaatgacatgtttcgggaagaa 16363575  T
Q  166 cataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
     | |||||||||| |||||| |||||| | ||||||| || |||||||||||||||||| ||||||||||||    
T  16363576 tagaattatagacacaaataaagaaaagaatacaaatgttccgaaatcataggcaattgatctaatactcct 16363647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 12011323 - 12011259
Alignment:
Q  171 ttatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  12011323 ttatagactcaaatattgaaaacattccaaatgtttcgaaatcataggcaattgctctaatactc 12011259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 15811718 - 15811553
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnn 134  Q
    ||||| |||||||||||||| |||| |||| ||||||| |||||| |||||||||||||||| || ||| ||||||||||||||||||||||||          
T  15811718 ctcttaaatcttcaatcttcgtcttcccaa-ggaccacgtaaatcgtcggatgtcttgcttttccaatttgcatgatttcttcgtgaattacatcaagaa 15811620  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaat 202  Q
     |  ||||||||| ||||||||| | || |   | | || ||||||||||||||||||||||||||||    
T  15811619 cc-ccctaaaattgctatgtttcaggaaaactctgagtacagactcaaatatagaaaacattacaaat 15811553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 25959731 - 25959534
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgc-cga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||||||| |||| | |||||||||||||| | ||||||||||||||  || |||| |||||||||||||||||| ||         
T  25959731 ctcttgaatcttcattcttcatcttcccaatg-accacataaatctttgaatgtcttgctttgcatgatttgcttgatttcttcgtgaattaaat-caag 25959634  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || | ||||||| ||||||||| | ||||| | ||  | |||||||||||||||||| | ||||||| | ||||||||||||| | ||| ||||||||    
T  25959633 aacaccataaaattgctatgtttcaggaagaatagaa--agagactcaaatatagaaaataatacaaatatctcgaaatcataggtagttgatctaatac 25959536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 235
Target Start/End: Complemental strand, 27116456 - 27116298
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||||||| ||| ||||||||||| |||||||||||| |||||||||||       |  |||| |||| ||||||||||| ||||| | |||||     
T  27116456 aatcttcggatgttcttactttgccgatttgcatgatttctttgtgaattacataaaaaaac--cctagaattgctatgtttcgggaagaatagaattac 27116359  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    | ||| |||||||||||||||||||||| |  | ||||||||| ||||| |||||||||||    
T  27116358 atactaaaatatagaaaacattacaaatgtcccaaaatcatagacaatttctctaatactc 27116298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 33192209 - 33192373
Alignment:
Q  71 cacataaatcttcggatgtcttgctttgcc-gatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacat 168  Q
    |||||||||||| |||| |||||||||||| |||| || ||||||||| ||||||||| |       || ||||||||| |||||||| || ||||| |     
T  33192209 cacataaatctttggatttcttgctttgcctgatttgcttgatttctttgtgaattac-ttcaaaaacaccctaaaattgctatgtttagggaagaatag 33192307  T
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    ||||| |||||||||||||||||||||||||||  | |||||||| ||| |||||  |||||||||    
T  33192308 aattacagactcaaatatagaaaacattacaaacatctcgaaatcgtagacaattaatctaatact 33192373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 26022323 - 26022418
Alignment:
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    ||||||| ||||||||| | ||||  | ||||| |||||||||||||||||||||||||||| |  |||||||||| |||||||||| ||||||||    
T  26022323 taaaattgctatgtttcaggaagactagaattaaagactcaaatatagaaaacattacaaatgtcccgaaatcataagcaattgctccaatactcc 26022418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 15631094 - 15630996
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  | ||||| | |||||||||||||||||||||||||  | ||||||||||||||||| | ||||||||||||    
T  15631094 cctaaaattgctatgtttcgggaaaactagaattacatactcaaatatagaaaacattacaaaagtctcgaaatcataggcaatcgttctaatactcct 15630996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 235
Target Start/End: Original strand, 16114624 - 16114822
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||||| |||| |||   || |||||||   ||||||||||||   ||| |||||||||||||| ||||||||||          
T  16114624 ctcttgaatcttcattcttcatcttcccaa-ggaattcacaaatctttatatgtcttgctttaatgatatgcatgatttcttcatgaattacatcaagaa 16114722  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     |||||||||||| ||||||||  | ||||||| ||||| | | |||| ||||||||||||||||||| |  | ||||||| || |||||||||||||||    
T  16114723 -catcctaaaattgctatgtttttggaagaacaaaattacatattcaattatagaaaacattacaaatgtccctaaatcatgggaaattgctctaatact 16114821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 22426686 - 22426588
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||| | ||||  | ||||| |||||||||||||||||||||||||||  |  |||||||||||||||| | ||||||||||||    
T  22426686 cctaaaattgctatgtttcaggaagactagaattacagactcaaatatagaaaacattacaaaagtcccgaaatcataggcaatcgttctaatactcct 22426588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 7881619 - 7881711
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacat 128  Q
    ||||||||||||| |||| |||||  ||| ||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||    
T  7881619 tcttgaatcttcattctttatcttctcaa-ggaccacataaatcttcagatgtctttgctttgccaatttgcatgatttcttcgtgaattacat 7881711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 22665712 - 22665809
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    ||||||||| ||||||||||  ||||| | ||||| | |||||||||||||||||||||||||| |   |||||||||||||||| ||||| ||||||    
T  22665712 cctaaaattgctatgtttcgagaagaatagaattacaaactcaaatatagaaaacattacaaatgtcctgaaatcataggcaatttctctagtactcc 22665809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 28009672 - 28009770
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |    ||||| | |||||||||||||||| ||||||||| | ||||||| |||||||||||||||||| |||||    
T  28009672 cctaaaattgctatgtttcgggaaaactggaattacatactcaaatatagaaaagattacaaatgtctcgaaattataggcaattgctctaatgctcct 28009770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 26101723 - 26101877
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||       || |||| |||| ||||||||||| ||||| | |||||     
T  26101723 aatcttcggatgttcttgctttgccaatttgcatgatttcttcgtgaactacatcaaaaa-caccctataattgctatgtttcgggaagaatagaattac 26101821  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaa 230  Q
    | | || ||||||||||||||||||||| |  |||||||||||  ||||| |||||    
T  26101822 atattccaatatagaaaacattacaaatatcccgaaatcatagataattgttctaa 26101877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 14780634 - 14780570
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
    |||||||||||||||||||||||||||||||||  |  |||||||||||||||| | ||||||||    
T  14780634 aattatagactcaaatatagaaaacattacaaaagtcccgaaatcataggcaatcgttctaatac 14780570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 15542477 - 15542381
Alignment:
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| |||||||||||||| |  | ||||| | ||||| |||||||||||||||||||  |  |||||||||||||||| | ||||||||||||    
T  15542477 taaaattgctatgtttcggaaaaactagaattacatactcagatatagaaaacattacaaaagtcccgaaatcataggcaatcgttctaatactcct 15542381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 21450693 - 21450776
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    ||||||||| ||||||||||| || |  | ||||| | ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  21450693 cctaaaattgctatgtttcggtaaaattagaattacaaactcaaatatagaaaacattacaaagttcccgaaatcataggcaat 21450776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 18098375 - 18098321
Alignment:
Q  183 atatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||| ||||||||| | ||||||||||||||||||| ||||||||||||    
T  18098375 atatagaaaatattacaaatgtctcgaaatcataggcaattgatctaatactcct 18098321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 18527667 - 18527569
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  | ||||| |||||||||||||||||| ||||||||  |  ||||||||||||||||   ||||||||||||    
T  18527667 cctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaagattacaaaactcccgaaatcataggcaatcattctaatactcct 18527569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 17543348 - 17543188
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    |||||||| |||||||||||||||| || ||||| |||||||| |||||||||        ||| |||||||| |||||||| || ||||| | |||||     
T  17543348 aaatcttcagatgtcttgctttgcctatatgcattatttcttcatgaattaca--ataaaacatgctaaaattgctatgtttagggaagaatagaattac 17543251  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    | |||| |||| | |||||||||||||| |  |||||| ||| ||||||| | ||||||||||    
T  17543250 atactccaatacataaaacattacaaatgtcccgaaataataagcaattgatttaatactcct 17543188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 16915329 - 16915269
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||  || | |||||||||||||| | ||||||||||||    
T  16915329 actcaaatatagaaaacattacaaaagttccaaaatcataggcaatcgttctaatactcct 16915269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 18100049 - 18099897
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-gattgcat-gatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||||||||  || |  ||||||||||||||||||||||||||||  | ||||   | ||||||||||||||||||||         
T  18100049 ctcttgaatcttcattcttcatctttttaa-gatccacataaatcttcggatgtcttgctttttctgattttctcgatttcttcgtgaattacatgaaga 18099951  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatag 188  Q
      |  ||| |||||||||||||| |||||||| | ||||| ||||||||||||||    
T  18099950 a-ctccctgaaatttctatgttttggaaagaatagaattacagactcaaatatag 18099897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 22624481 - 22624625
Alignment:
Q  79 tcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatag 176  Q
    ||||||||||| |||| ||| |||||| |||||||||||||||||||||| |       |  |||||||||||||||||||||||| |  | ||||| ||    
T  22624481 tcttcggatgttcttgattttccgatttgcatgatttcttcgtgaattacttcaaaaatcc-cctaaaatttctatgtttcggaaaaactagaattacag 22624579  T
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    ||| ||||||||||||||||| ||   |  ||||||||||||||||    
T  22624580 actaaaatatagaaaacattaaaagagtcccgaaatcataggcaat 22624625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 242
Target Start/End: Complemental strand, 15571962 - 15571756
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| ||||||| ||||  |||| ||| |||||||||||||||||||| |||||| || || | ||||||||| ||||||||| |         
T  15571962 ctcttgaatcttcattcttcat-tttctcaaggtccatataaatcttcggatgtcttgttttgcctgattttcttgatttctttgtgaattac-ttcaag 15571865  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      |  |||||||||  ||||||| || ||||| | ||||| | ||| |||||||||||| ||||||||  |    ||||||||| |||||| ||||||||    
T  15571864 aactccctaaaattgttatgttttgggaagaatagaattacatacttaaatatagaaaatattacaaacgtcctaaaatcatagacaattgatctaatac 15571765  T
Q  234 tcctttgct 242  Q
    |||| ||||    
T  15571764 tcctctgct 15571756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 18734820 - 18734658
Alignment:
Q  76 aaatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataatta 173  Q
    ||||||| |||||| |||| |||||||||| |||||||||||||||||||||| |       |  || |||||| ||||||||| | || |  | |||||    
T  18734820 aaatctttggatgttcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaaaccc-ccaaaaattgctatgtttcaggaaaactagaatta 18734722  T
Q  174 tagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
     | |||||||||| ||||||||||||||  | || |||||||||||||| | ||||||||||||    
T  18734721 catactcaaatattgaaaacattacaaaagtctcaaaatcataggcaatcgttctaatactcct 18734658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 18827352 - 18827418
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||||||||||||||||||| ||||||||  |  ||||||||||||||||   ||||||||||    
T  18827352 aattatagactcaaatatagaaaaaattacaaaagtcccgaaatcataggcaatcattctaatactc 18827418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 20107780 - 20107842
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaa 201  Q
    ||||||||| ||||||||||| || |  ||||||| | |||||||||||||||||||||||||    
T  20107780 cctaaaattgctatgtttcgggaaaactataattacaaactcaaatatagaaaacattacaaa 20107842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 16180674 - 16180741
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| ||||||||||| |||||||||||||||  |  ||||||||||||||| || ||||||||||||    
T  16180674 aattacagactcaaatacagaaaacattacaaaagtcccgaaatcataggcaa-tgttctaatactcct 16180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 7221479 - 7221538
Alignment:
Q  176 gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||||||||||| |||||||||| |  ||||||||||  |||||| ||||||||||    
T  7221479 gactcaaatatagaaagcattacaaatgtcccgaaatcataaccaattgttctaatactc 7221538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 17444989 - 17445084
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaat 231  Q
    |||||||||||| |||| | || | ||||| | ||||| ||||||||||||| |||||| ||||||| |  | |||||||| ||||||| ||||||    
T  17444989 catcctaaaattgctatttctcaggaagaatagaattacagactcaaatataaaaaacaatacaaatatcccaaaatcataagcaattgatctaat 17445084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 18832145 - 18832239
Alignment:
Q  143 aaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| |||||||| || || | || ||||| |||||||||||| ||||||||||||||  |   ||||||||||| ||| | ||||||||||||    
T  18832145 aaattgctatgttttgggaaaatcagaattacagactcaaatatggaaaacattacaaaagtcctgaaatcataggtaatcgttctaatactcct 18832239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 27546346 - 27546408
Alignment:
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||||  | || ||||||||| ||||   ||||||||||||    
T  27546346 agactcaaatatagaaaacattacaaaagtctcaaaatcatagacaatcattctaatactcct 27546408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 21663231 - 21663166
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    ||||| ||||||||||||||| |||||||| ||  |  |||||||||||||||| | |||||||||    
T  21663231 aattacagactcaaatatagagaacattactaaagtcccgaaatcataggcaatcgttctaatact 21663166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 24901145 - 24901230
Alignment:
Q  149 ctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    |||||||| ||||| || | ||||| |||||||||||| ||||||| ||||||| |   ||||| ||| ||||||| |||||||||    
T  24901145 ctatgttttggaaataatagaattacagactcaaatattgaaaacaatacaaatgtcctgaaatgataagcaattgatctaatact 24901230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 26611472 - 26611419
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    ||||| |||||||||||||||||||||||||||  |   |||||||||||||||    
T  26611472 aattacagactcaaatatagaaaacattacaaaagtcctgaaatcataggcaat 26611419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 25402576 - 25402544
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaa 201  Q
    ||||| |||||||||||||||||||||||||||    
T  25402576 aattagagactcaaatatagaaaacattacaaa 25402544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 39 - 237
Target Start/End: Complemental strand, 88706 - 88509
Alignment:
Q  39 ttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnnca 137  Q
    ||||||||||| ||||| | ||||||| ||||||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||||||       ||    
T  88706 ttgaatcttcattcttcttatttccaa-ggaccacataaatcttcagatgtcttgcattgccgatttgcatgatttctttgtgaattacatcaagaa-ca 88609  T
Q  138 tcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||| ||||||||| ||||||| ||||| |||||||||||||| ||||||| |  | ||||||||| |||||||||||| ||||||    
T  88608 tcctaaaatttctatgttccggaaagaatataattacagactgaaatatagaaaacaatacaaatgtcccaaaatcatagacaattgctctaagactcct 88509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 4e-41; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 242
Target Start/End: Original strand, 5691585 - 5691785
Alignment:
Q  42 aatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc--gattgcatgatttcttcgtgaattacatnnnnnnncatc 139  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||  | |||  |||||||||||||||||||||       || |    
T  5691585 aatcttcattcttcatcttcccaa-ggaccacataaatcttcggatgtcttgctttgcctggtttgtttgatttcttcgtgaattacatcaagaa-cacc 5691682  T
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactccttt 239  Q
    |||||||| |||||| |||| ||||| | |||||||||||||||||||||||||| ||||||| ||  |||||||||| |||||| |||||||||||| |    
T  5691683 ctaaaattgctatgtctcgggaagaatagaattatagactcaaatatagaaaacaatacaaatgttctgaaatcatagacaattgatctaatactcctct 5691782  T
Q  240 gct 242  Q
    |||    
T  5691783 gct 5691785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 240
Target Start/End: Original strand, 25024930 - 25025133
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtct-tgctttgccgatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||||||| || ||  ||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||         
T  25024930 ctcttgaatcttcattcttcatcttcccgaaa-accacataaatcttcggatgtcaatgttttgccgatttgcatgatttcttcgtgaattacataaaaa 25025028  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| |||||||||||||||||||  |||| | |||||||||||||||||||||||||| |  | ||||||||||||||||| ||||| |    
T  25025029 --caccctaaaattactatgtttcggaaagaacaggattacatactcaaatatagaaaacattacaaatgtcccaaaatcataggcaattgcactaatgc 25025126  T
Q  234 tcctttg 240  Q
    |||||||    
T  25025127 tcctttg 25025133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 240
Target Start/End: Complemental strand, 9849980 - 9849777
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    ||||||||| |||| |||| ||||| |||| ||||||||||| |||| |||||| || |||||||||||| ||||||||||||||||||||||||         
T  9849980 ctcttgaattttcattctttatcttcccaa-ggaccacataa-tctttggatgtttttgctttgccgatttgcatgatttcttcgtgaattacataaaaa 9849883  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttt-tcgaaatcataggcaattgctctaata 232  Q
      || ||||||||| ||||||||||| ||||||| ||||| | |||||||||||| |||| ||||||||||| | ||||||||||||||||| |||||||    
T  9849882 --caccctaaaattgctatgtttcgggaagaacaaaattacatactcaaatataggaaactttacaaattttcttgaaatcataggcaattgatctaata 9849785  T
Q  233 ctcctttg 240  Q
    ||||||||    
T  9849784 ctcctttg 9849777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 239
Target Start/End: Complemental strand, 20828411 - 20828210
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||||||||| |||| |  ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||          
T  20828411 ctcttgaatcttcaatcttcgtcttcc--aaggaccgcataaatcttcggatgtcttgctttgccgatttgcatgatttcttcgtgaattacat-caaga 20828315  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     |  ||||||||| ||||||||||| || |   | |||| ||||||||||| ||||| |||||||||| |  | |||||||||||||||| | |||||||    
T  20828314 acgccctaaaattgctatgtttcgggaaaactctcattacagactcaaatacagaaaccattacaaatgtcccaaaatcataggcaattgttgtaatact 20828215  T
Q  235 ccttt 239  Q
    |||||    
T  20828214 ccttt 20828210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 19883715 - 19883586
Alignment:
Q  106 catgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttt 205  Q
    |||||||||||||||||||||||       || |||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |     
T  19883715 catgatttcttcgtgaattacatcaaaaa-caccctataatttctatgtttcgggaagaatataattatagactcaaatatagaaaacattacaaatgtc 19883617  T
Q  206 tcgaaatcataggcaattgctctaatactcc 236  Q
     ||||||||||| |||||| |||||||||||    
T  19883616 ccgaaatcatagacaattgttctaatactcc 19883586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 16669945 - 16669797
Alignment:
Q  86 atgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaat 184  Q
    |||||||||||||||||| |||||||||| ||||||||||  |        |||||||||||| || ||||| || ||||| ||||||| | ||||||||    
T  16669945 atgtcttgctttgccgatatgcatgattttttcgtgaatttaa-aacaaaacatcctaaaattgctttgttttgggaagaatataattacatactcaaat 16669847  T
Q  185 atagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    |||||||| ||||||||||| ||||||||||| ||||||| |||||||||    
T  16669846 atagaaaatattacaaatttctcgaaatcataagcaattgttctaatact 16669797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 5685461 - 5685553
Alignment:
Q  35 tctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattac 126  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||| |||||||||    
T  5685461 tctcttgaatcttctttcttcatctttccaa-ggaccacataaatcttcggatgtcttgctttgcctgatttgcttgatttctttgtgaattac 5685553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 14573312 - 14573473
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||       ||  |||||||| ||||||||||| ||||| | |||||     
T  14573312 aatcttcggatgttcttgctttgacgatttgcatgatttctttgtgaattacatcaaaaa-cacactaaaattgctatgtttcgggaagaatagaattac 14573410  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    | | |||||||||||||||||||||||| |   ||||| |||| |||||||||||||||||||    
T  14573411 atattcaaatatagaaaacattacaaatatcatgaaataatagacaattgctctaatactcct 14573473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 233
Target Start/End: Complemental strand, 18447670 - 18447517
Alignment:
Q  79 tcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattataga 177  Q
    ||||| ||||||||||||| |||||| ||||||||| ||||||||||||||       || |||||||||  |||||||||  ||||| | ||||| | |    
T  18447670 tcttcagatgtcttgcttttccgatttgcatgatttgttcgtgaattacattaaaa--caccctaaaattgttatgtttcgagaagaatagaattacaaa 18447573  T
Q  178 ctcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
    ||||||||||||||| ||||||||| |  |||||||||| |||||| |||||||||    
T  18447572 ctcaaatatagaaaaaattacaaatatcccgaaatcataagcaatttctctaatac 18447517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 26114474 - 26114382
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacat 128  Q
    |||||||||||||| |||||||||||  || ||||||||||||||||||||||| ||| |||||||| |||||| |||||||||| ||||||||    
T  26114474 ctcttgaatcttcattcttcatctttttaa-ggaccacataaatcttcggatgttttgttttgccgatttgcataatttcttcgttaattacat 26114382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 239
Target Start/End: Complemental strand, 11252349 - 11252200
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| |||||||||||||||||||||| |       |  ||||||||| |||||||||||||| |  | ||| | |||||||||||||    
T  11252349 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaaccc--cctaaaattgctatgtttcggaaaaactagaatcacagactcaaatata 11252252  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactccttt 239  Q
    ||||| ||||||||  |  |||||||||||||||| | ||||||||||||||    
T  11252251 gaaaatattacaaaagtcccgaaatcataggcaatcgttctaatactccttt 11252200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 7583718 - 7583816
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  | ||||| |||||||||||||||||||||||||||  |   ||||||||||||||||| ||||||||||||    
T  7583718 cctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaaaagtcctgaaatcataggcaattgttctaatactcct 7583816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 17434375 - 17434458
Alignment:
Q  154 tttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||| ||||| | ||||| |||| ||||||||||||||||||||||| |  |||||||||| ||||||| ||||||||||||    
T  17434375 tttcgggaagaatagaattacagacccaaatatagaaaacattacaaatgtcccgaaatcataagcaattgatctaatactcct 17434458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 1832284 - 1832127
Alignment:
Q  79 tcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataatta-tag 176  Q
    ||||| ||||| |||||||||||||| ||||||||| ||||||||||||||       || || | ||||  |||||||||| ||||| ||||||| | |    
T  1832284 tcttcagatgtattgctttgccgatttgcatgattttttcgtgaattacatcaaaa--ca-ccaagaattgttatgtttcgggaagaatataattacttg 1832188  T
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||| |||||||||||||||||||||| | || |||| ||  ||||||||||||||||||||    
T  1832187 acttaaatatagaaaacattacaaatatctcaaaattatgagcaattgctctaatactcct 1832127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 10106221 - 10106319
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  ||||||| ||||||||||||||||||||||||| |  |  ||||||||||| |||||| | ||||||||||    
T  10106221 cctaaaattgctatgtttcgggaaaactataattacagactcaaatatagaaaacattacagaagtcccgaaatcatagacaattgttgtaatactcct 10106319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 23970824 - 23970732
Alignment:
Q  150 tatgtttcggaaagaacataattata-gactcaaatatagaaaacattacaaatttttcgaaatc--ataggcaattgctctaatactccttt 239  Q
    |||||||||| ||||| | ||||| | |||||||||| |||||||||||||||| || |||||||  ||| ||||||||||||||||||||||    
T  23970824 tatgtttcgggaagaatacaattacatgactcaaatacagaaaacattacaaatgttccgaaatcatataagcaattgctctaatactccttt 23970732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 9536896 - 9536828
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||| ||||| | ||||||||||    
T  9536896 aattatagactcaaatatagaaaacattacaaaagttccaaaatcataggtaattgttgtaatactcct 9536828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 237
Target Start/End: Original strand, 17711182 - 17711330
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| |||||||||||||||||||||| |       |  ||||||||| ||||||||||| || |  | ||||| |||||||||||||    
T  17711182 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaacccc-cctaaaattgctatgtttcgggaaaactagaattaaagactcaaatata 17711280  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| |||||  |  |||||| ||||||||| | ||||||||||||    
T  17711281 gaaaacatcacaaaagtcccgaaattataggcaatcgttctaatactcct 17711330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 19094070 - 19094133
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc 100  Q
    |||||||||||||| |||||||||| || ||| ||||||||||||||||||||||| ||||||||    
T  19094070 ctcttgaatcttcattcttcatctt-cctaagaaccacataaatcttcggatgtctggctttgcc 19094133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 235
Target Start/End: Original strand, 9053870 - 9054027
Alignment:
Q  77 aatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata 175  Q
    |||||||  ||||||| |||||| |||| |||||||||||||||| |||||||       |  ||||||||| ||||||||||  |||||    ||||||    
T  9053870 aatcttcaaatgtcttactttgctgatttgcatgatttcttcgtgcattacatcaaaatac--cctaaaattgctatgtttcgagaagaattgtattata 9053967  T
Q  176 gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||||||||||| ||||||||| |   |||||||||  |||||| ||||||||||    
T  9053968 gactcaaatatagaaaatattacaaatgtcctgaaatcataaccaattgatctaatactc 9054027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 235
Target Start/End: Original strand, 10236414 - 10236611
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-gatt-gcatgatttcttcgtgaattacatnnnnnn 134  Q
    ||||||||||||| | |||||||| |||| || ||||||||||||||  ||||||||| ||| | |||| || ||||||||||||||||||| |          
T  10236414 tcttgaatcttcattattcatcttcccaa-ggtccacataaatcttcaaatgtcttgcattgtctgatttgcttgatttcttcgtgaattac-ttcaaca 10236511  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || ||||||||| |||| |||| | ||||| | ||||| | |||| |||||| || ||||||||||| |  |||||||||||||||||| || ||||||    
T  10236512 acaccctaaaattgctatttttcaggaagaatagaattacaaactc-aatataaaatacattacaaatgtaccgaaatcataggcaattgatcaaatact 10236610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 15047693 - 15047776
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    |||| |||||||||| ||| | ||||| ||||||| |||||||||||||||||||| ||||| | | |||||||||||| ||||    
T  15047693 cctagaatttctatggttctggaagaatataattacagactcaaatatagaaaacactacaattgtctcgaaatcatagtcaat 15047776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 15106731 - 15106648
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    |||| |||||||||| ||| | ||||| ||||||| |||||||||||||||||||| ||||| | | |||||||||||| ||||    
T  15106731 cctagaatttctatggttctggaagaatataattacagactcaaatatagaaaacactacaattgtctcgaaatcatagtcaat 15106648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 15166394 - 15166492
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  | ||||| | |||||||||||||||||||||||||  |  |||||||| ||||||| | ||||||||||||    
T  15166394 cctaaaattcctatgtttcgggaaaattagaattacaaactcaaatatagaaaacattacaaaagtcccgaaatcacaggcaatcgttctaatactcct 15166492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 18750750 - 18750848
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||  || |  | ||||| | ||||||||||| |||||||||||||  |  | |||||||||||||||||||||||||||||    
T  18750750 cctaaaattgctatgtttcgagaaaactagaattacatactcaaatataaaaaacattacaaaagtcccaaaatcataggcaattgctctaatactcct 18750848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 19604027 - 19603930
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||  |||||||||| || |  ||||||||||||||||||||||||||| ||| |||  |  ||||||| ||| |||||||||||||||||||    
T  19604027 cctaaaattgttatgtttcgggaaaactataattatagactcaaatatagaaaac-ttagaaaagtcccgaaatcttagacaattgctctaatactcct 19603930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 22350409 - 22350315
Alignment:
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||| |||||||||||||| || | ||||| ||||||||||||| || | ||||||||| |  |||||| |||| |||||| ||||||||||    
T  22350409 taaaattgctatgtttcggaaaaaatagaattacagactcaaatataaaataaattacaaatgtcccgaaatgatagacaattgatctaatactc 22350315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 19556674 - 19556613
Alignment:
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    |||||||||||||||||||||||||||  || | |||||||||||||| | |||||||||||    
T  19556674 agactcaaatatagaaaacattacaaaagttccaaaatcataggcaatcgttctaatactcc 19556613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 25096254 - 25096323
Alignment:
Q  167 ataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    ||||||| ||||||||||| |||||||||||||||  |  |||||||||||||||| | |||||||||||    
T  25096254 ataattacagactcaaatacagaaaacattacaaaagtcccgaaatcataggcaatcgttctaatactcc 25096323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 16928852 - 16928948
Alignment:
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| |||||||| ||||| |  | ||||| |||||||||||||||||||||||||||  || |||||| |||| ||||   ||||||||||||    
T  16928852 taaaattgctatgttttggaaaaactagaattacagactcaaatatagaaaacattacaaaagttccgaaattatagacaatcattctaatactcct 16928948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 17024857 - 17024782
Alignment:
Q  143 aaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcatagg 218  Q
    ||||||||||||||||| || |  | ||||| ||||||||||||||||| |||||||||| |  ||||||||||||    
T  17024857 aaatttctatgtttcgggaaaactagaattacagactcaaatatagaaaccattacaaatgtcccgaaatcatagg 17024782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 19919278 - 19919216
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    ||||| ||||||||||||||||||||||||||| ||  |||||||||||| ||||| |||||||    
T  19919278 aattacagactcaaatatagaaaacattacaaa-ttcccgaaatcataggaaattgatctaata 19919216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 239
Target Start/End: Complemental strand, 12246771 - 12246636
Alignment:
Q  102 attgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata-gactcaaatatagaaaacattacaa 200  Q
    ||||||||||||||| |||||||||||       |  ||||||||| |||| |||||| ||||| ||||||| | ||||||| |||||||||||||||||    
T  12246771 attgcatgatttctttgtgaattacatcaaaatac--cctaaaattgctatatttcgggaagaatataattacatgactcaagtatagaaaacattacaa 12246674  T
Q  201 atttttcgaaatcataggcaattgctctaatactccttt 239  Q
     | |  || ||||||| ||||||| | ||||||||||||    
T  12246673 gtgtcccg-aatcataagcaattgttttaatactccttt 12246636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 17108646 - 17108740
Alignment:
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||| ||||||||||| || |  | ||||| ||||||||||||| |||||||||||||  |   ||||||||||||||||  ||||||||||    
T  17108646 taaaattgctatgtttcgggaaaactagaattacagactcaaatataaaaaacattacaaaagtcctgaaatcataggcaatttttctaatactc 17108740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 23083525 - 23083724
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||||| |||| ||||  || ||||||||  || ||||||||   |||| ||| ||||||||||||||||||||           
T  23083525 ctcttgaatcttcattcttcatcttcccaa-ggacttcacaaatcttcatatatcttgcttaatcgatatgcctgatttcttcgtgaattacaacaaaac 23083623  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     |  |||||||||  ||||||| || ||||| | | ||| | ||||||||||||||||||||||| |  |  | ||||||||  ||||||||||||||||    
T  23083624 tc--cctaaaattgatatgtttggggaagaatagagttacaaactcaaatatagaaaacattacagacgtcccaaaatcataaacaattgctctaatact 23083721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 9263516 - 9263423
Alignment:
Q  144 aatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||| ||||||||||| || || | ||||| ||||||||||||| ||||||||||||||    | |||| |||| |||||| ||||||||||||    
T  9263516 aattgctatgtttcgggaataatagaattacagactcaaatatataaaacattacaaatgacccaaaattatagacaattgttctaatactcct 9263423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 19539009 - 19538956
Alignment:
Q  185 atagaaaacattacaaatttttc-gaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||| | || ||||||||||||||||| ||||||||||||    
T  19539009 atagaaaacattacaaatgtctcagaaatcataggcaattgttctaatactcct 19538956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 22527809 - 22527861
Alignment:
Q  76 aaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattaca 127  Q
    |||||||| |||||||||||||||||| ||||||||||| ||| |||||||||    
T  22527809 aaatcttcagatgtcttgctttgccgatttgcatgattttttcatgaattaca 22527861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 17277771 - 17277874
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    ||||||||| |||||||| || ||||| | ||||  | || |||||||| ||||||||||| || |   ||||||||||||||||| |||||||| | ||    
T  17277771 cctaaaattgctatgttttgggaagaatagaattgcatacacaaatataaaaaacattacagatgtcatgaaatcataggcaattgatctaatacccatt 17277870  T
Q  239 tgct 242  Q
    ||||    
T  17277871 tgct 17277874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 10432104 - 10432202
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| |||||||| |||||    | ||||| | |||||||||||||||| |||| |||  || ||||||||||| |||| | ||||||||||||    
T  10432104 cctaaaattgctatgttttggaaaagctagaattacacactcaaatatagaaaatattataaaagttccgaaatcatagacaatagttctaatactcct 10432202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 17218455 - 17218553
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  |  |||| ||||||||| |||||||||| ||||||  |  ||||| |||||||||| | ||||||||||||    
T  17218455 cctaaaattgctatgtttcgggaaaattaggattacagactcaaagatagaaaacactacaaaagtcccgaaaacataggcaatcgttctaatactcct 17218553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 17335490 - 17335428
Alignment:
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| ||||||||| ||||||||  | || |||||||||||||| | ||||||||||||    
T  17335490 agactcaattatagaaaaaattacaaaagtctcaaaatcataggcaatcgttctaatactcct 17335428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 12616679 - 12616736
Alignment:
Q  178 ctcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||| ||||||||||||||||  |  |||||||||||| ||||| ||||||||||    
T  12616679 ctcaaatgtagaaaacattacaaaagtcccgaaatcataggaaattgttctaatactc 12616736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 13588590 - 13588739
Alignment:
Q  85 gatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata-gactcaa 182  Q
    ||||||| |||||| ||||| |||||||||||| ||| |||||||       || |||| |||| ||||||||  | ||||| || |||||| |||||||    
T  13588590 gatgtctagctttgtcgatttgcatgatttctttgtggattacatcaaaa--caccctataattgctatgtttttggaagaatattattatatgactcaa 13588687  T
Q  183 atatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    ||||||||||||| |||||| |  |||||||||| |  |||| |||||||||    
T  13588688 atatagaaaacataacaaatgtcccgaaatcataagtgattgttctaatact 13588739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 19667074 - 19667021
Alignment:
Q  185 atagaaaacattacaaatttttc-gaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||| |  | ||||||||||||||||| ||||||||||||    
T  19667074 atagaaaacattacaaatgtcccagaaatcataggcaattgttctaatactcct 19667021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 17335590 - 17335538
Alignment:
Q  76 aaatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattac 126  Q
    |||||||||||||| |||| |||| ||||| ||||||||||||||||||||||    
T  17335590 aaatcttcggatgttcttgatttgtcgatttgcatgatttcttcgtgaattac 17335538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 22171712 - 22171772
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||  |   |||||||||||||||   ||||||||||||    
T  22171712 actcaaatatagaaaacattacaaaaatcctgaaatcataggcaatcattctaatactcct 22171772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 9e-39; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 23644591 - 23644390
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttg-ctttgccgatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||  |||||||||| || |||||||||||||||||| |||||||||  |||||| |||| ||||||||||||||||||||||||         
T  23644591 ctcttgaatcttccttcttcatctt-cctaaggaccacataaatcttaggatgtctttactttgcggatttgcatgatttcttcgtgaattacatcaaaa 23644493  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      ||||||||| || ||||||||  | ||||||| || || |||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||    
T  23644492 a-catcctaaatttgctatgttttaggaagaacagaaatacagactcaaatatagaaaacattacaaatgtcccgaaatcataggcaattgatctaatac 23644394  T
Q  234 tcct 237  Q
    ||||    
T  23644393 tcct 23644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 22564820 - 22564622
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||   ||||| ||||||||||||| || || |||||||| |||||| ||||| ||||||||||||||||||||||||         
T  22564820 ctcttgaatcttcattcttc---tttcccaaggaccacataa-tcctcagatgtcttagctttgtcgatttgcatgatttcttcgtgaattacatcaaca 22564725  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| ||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |  |||||||| ||||||||||||||||||    
T  22564724 a-caccctaaaattgctatgtttcgagaagaacagaattacagactcaaatatagaaaacattacaaatgtcccgaaatcacaggcaattgctctaatac 22564626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 234
Target Start/End: Complemental strand, 9339250 - 9339054
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| | |||||||| | ||||  || || |||||||| ||||||||||||||| |||| | ||||||||||| ||||||||||          
T  9339250 ctcttgaatcttcatttttcatcttcctaaagt-cctcacaaatcttcagatgtcttgctttgcagatttgaatgatttcttcatgaattacatcaaaat 9339152  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     |  ||||||||| ||||||||||||||||| | ||||| | |||||||||||||||||||||||||| |  | |||||||| |||||||||||||||||    
T  9339151 ac--cctaaaattgctatgtttcggaaagaatagaattacaaactcaaatatagaaaacattacaaatgtccccaaatcataagcaattgctctaatact 9339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 22569679 - 22569878
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||  |||||||||| |||| || |||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||| |         
T  22569679 ctcttgaatcttcgttcttcatcttcccaa-ggtccacataaatcttcggatgtcttggtttgcctgatttgcttgatttcttcgtgaattac-ttaagg 22569776  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      |||||||||||| |||||  |||| ||||| | ||||| | | ||||||||||||||||||| |||| | ||||||||||||| ||||| ||||||||    
T  22569777 aacatcctaaaattgctatg--tcgggaagaatagaattacataatcaaatatagaaaacattaaaaatgtctcgaaatcataggaaattgatctaatac 22569874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 21079993 - 21079794
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||| |||| |||||||  |  ||  ||||||| |||||||||||||||||||| ||||||||||||| ||||||||||          
T  21079993 ctcttgaatcttcattcttaatctctccaaagt-cttcactaatcttcagatgtcttgctttgccgatttgcatgatttcttcttgaattacatcaaaa- 21079896  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || | |||||||||||||| ||||||| || | ||||| |||||||||||||||||||||| ||||| |    |||||||| ||||||| |||||||||    
T  21079895 -caccataaaatttctatgtatcggaaataatagaattacagactcaaatatagaaaacattgcaaatgtccaaaaatcatatgcaattgatctaatact 21079797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 9898141 - 9897940
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-gatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||| | |||||||||| |||| |||||||||||||| || ||||| |||| || || |||| | ||||||||||||||||||||||         
T  9898141 ctcttgaatctttattcttcatcttcccaa-ggaccacataaatcatcagatgtattgcctttcctgatttgtatgatttcttcgtgaattacatcaaga 9898043  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| |||||||||   ||||| | ||||| |||||||||||||||||||| ||||||| || |||||||||| | ||||| ||||| ||    
T  9898042 a-caccctaaaattgctatgtttcaagaagaatacaattacagactcaaatatagaaaacaatacaaatgttccgaaatcataagtaattgatctaacac 9897944  T
Q  234 tcct 237  Q
    ||||    
T  9897943 tcct 9897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 20080562 - 20080760
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||||| ||  ||| |||||||||| ||| ||||||||||||| |||| || ||||||||||| |||||||||||          
T  20080562 ctcttgaatcttcattcttcatctt-cctgagg-ccacataaatattcagatgtcttgcttttccgatttacatgatttctttgtgaattacatcaagaa 20080659  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
      | ||||||||||||||||||||| ||||| | ||||| ||||||||||||| || ||| || ||| | | | | |||||||||||||| |||||||||    
T  20080660 g-accctaaaatttctatgtttcgggaagaatagaattacagactcaaatataaaatacaatataaa-tgtcccatatcataggcaattgatctaatact 20080757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 235
Target Start/End: Original strand, 2588159 - 2588318
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgattg-catgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||||||| |||||||||||||||  || ||||||||||||||||||||       || || | |||| | |||||| || ||||| | |||||     
T  2588159 aatcttcggatgttcttgctttgccgattatcacgatttcttcgtgaattacatcaaaaa-cacccaagaattgccatgttttgggaagaatagaattac 2588257  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||||||||||||||||||||||| |  ||||||||||| |||||| ||||||||||    
T  2588258 agactcaaatatagaaaacattacaaatgtcacgaaatcatagacaattgttctaatactc 2588318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 8038285 - 8038123
Alignment:
Q  76 aaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataatta 173  Q
    |||||||||||||| || |||||||||||| ||||||||||||||| |||||| |       || ||||||||| |||||||| || ||||  | ||||     
T  8038285 aaatcttcggatgtttttgctttgccgatttgcatgatttcttcgtaaattac-ttcaaaaacaccctaaaattgctatgttttgggaagactagaattg 8038187  T
Q  174 tagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
     ||||||||||||||||||||||| |||| | | ||||||||||||| || |||||||||||||    
T  8038186 cagactcaaatatagaaaacattataaatgtcttgaaatcataggcagtttctctaatactcct 8038123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 8246539 - 8246637
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| ||||| ||||||| |||||||||||||||||||| || |||| |  | ||||||||| |||||| ||||||||||||    
T  8246539 cctaaaattgctatgtttcgggaagaatataattacagactcaaatatagaaaacaataaaaatgtcccaaaatcatagacaattgatctaatactcct 8246637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 3358003 - 3358166
Alignment:
Q  73 cataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataat 171  Q
    ||||||||||  |||||||| ||||||||||| |||||||||||||  ||||||| |       || | ||| ||| ||||||||||||||||| |||||    
T  3358003 cataaatctttagatgtctttctttgccgatttgcatgatttcttcacgaattacgtcaaaa--caccataatattgctatgtttcggaaagaaaataat 3358100  T
Q  172 tatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    || |||||||||||||||||||||| ||||| |  |  |||||||  ||||| |||||||||||||    
T  3358101 tacagactcaaatatagaaaacatttcaaatgtcccataatcataaacaattactctaatactcct 3358166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 14076322 - 14076420
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || || | |||||  ||||||||||||||||||||||||||  |   |||||||||||||||| |||||||||||||    
T  14076322 cctaaaattgctatgtttcgggaaaaatagaattagggactcaaatatagaaaacattacaaaagtcctgaaatcataggcaatttctctaatactcct 14076420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 15600679 - 15600594
Alignment:
Q  44 tcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattacat 128  Q
    |||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||    
T  15600679 tcttcattcttcatatttccat-ggaccacataaatcttcggatgtcttgctttgcctgatttgcataatttcttcgtgaattacat 15600594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 21932335 - 21932498
Alignment:
Q  76 aaatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataatta 173  Q
    ||||||| |||||| ||||||||||| ||| |||||||||||||| ||||||| |       |  || |||||| ||||||||||| ||||  | |||||    
T  21932335 aaatctttggatgttcttgctttgccaatttgcatgatttcttcgcgaattactttaaaactcccccgaaaattgctatgtttcgggaagactagaatta 21932434  T
Q  174 tagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
     |||||||||||||||||||||||||||| |    ||||||||| ||||| |||||||||||||    
T  21932435 cagactcaaatatagaaaacattacaaatgtcctaaaatcatagacaatttctctaatactcct 21932498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 14077993 - 14078061
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| ||||||||||||| |||||||||||||  |  |||||||||||||||||||||||||||||||    
T  14077993 aattagagactcaaatataaaaaacattacaaaagtcccgaaatcataggcaattgctctaatactcct 14078061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 9507503 - 9507344
Alignment:
Q  77 aatcttcggatgtcttgctttgccgattgc-atgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata 175  Q
    ||||||| ||||| ||| ||||||||||   ||||||||||||||||||||||       || |||| |||| |||||| |||| || || | ||||| |    
T  9507503 aatcttcagatgttttgatttgccgatttttatgatttcttcgtgaattacatcaaaaa-caccctataattgctatgtctcgggaataatagaattaca 9507405  T
Q  176 gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
     |||||||||||||||| ||||||||| |  |||||||||| ||||||| |||||||||||    
T  9507404 tactcaaatatagaaaatattacaaatgtcccgaaatcataagcaattgttctaatactcc 9507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 235
Target Start/End: Original strand, 19246100 - 19246298
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||| ||||||||||||  | || |||| |||||||||| | |||||| |          
T  19246100 ctcttgaatcttcattcttcatcttcccaa-ggaccacataaatcttcagatgtcttgcttgcctgatttgcttgatttcttcattaattacct-catga 19246197  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || ||||||||  | |||||| |  |||||   ||||| |||||||||||||||||| | ||||||| |  | |||||||| ||||||| |||||||||    
T  19246198 acaccctaaaatagccatgttttgagaagaatcaaattacagactcaaatatagaaaataatacaaatgtcccaaaatcataagcaattgatctaatact 19246297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 6629147 - 6629050
Alignment:
Q  138 tcctaaaatttctatgtttc-ggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    |||||||||||||||||||  || ||||| | ||||| |||||||||||||||||||||||||||| |   |||| ||| |||||||| |||||||||    
T  6629147 tcctaaaatttctatgtttttgggaagaatagaattacagactcaaatatagaaaacattacaaatatcctgaaaccattggcaattgatctaatact 6629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 8246450 - 8246510
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgcttt 97  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||    
T  8246450 ctcttgaatcttcattcttcatcttcccaa-ggaccacataaatcttcgaatgtcttgcttt 8246510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 24388145 - 24388049
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| |||||||| ||||||| | ||||| ||| |||||||||||||||| || |||| |  |||||||||||| ||||| ||||||||||||    
T  24388145 ctaaaatttatatgtttccgaaagaatagaattagagagtcaaatatagaaaaca-tataaatgtcccgaaatcataggaaattgatctaatactcct 24388049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 1636560 - 1636656
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||| ||||||||||| || |  | | |||||||||||||||| ||||||||||||||| |  | |||| ||||||||||| ||||||||||    
T  1636560 cctaaaattgctatgtttcgggaaaactagagttatagactcaaatatggaaaacattacaaatatcccaaaattataggcaattgttctaatactc 1636656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 9848041 - 9848185
Alignment:
Q  91 ttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatataga 189  Q
    ||||||||||||| |||||||||| |||||||||||| |        || |||||||| |||||||| |  |||| || ||||||||| |||||||||||    
T  9848041 ttgctttgccgatatgcatgattttttcgtgaattacttcaaaaag-attctaaaattgctatgttttgagaagaccagaattatagattcaaatataga 9848139  T
Q  190 aaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||||||  |    |||||||||| ||||||||||||||||    
T  9848140 aaacattacaaacatcctaaaatcataggaaattgctctaatactc 9848185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 14641560 - 14641656
Alignment:
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| ||||||||||  || | || ||||| |||||||| ||||||||||||||||||  || | |||||||||| ||||| ||||||||||||    
T  14641560 taaaattgctatgtttcgagaaaaccagaattacagactcaattatagaaaacattacaaaagttccaaaatcataggtaattgttctaatactcct 14641656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 21060676 - 21060477
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgattg-catgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||| |||| |||||||  |  ||  ||||||| ||||||||||||| || |||  |||||||||||| ||||||||||          
T  21060676 ctcttgaatcttcattcttgatctctccaaagt-cttcactaatcttcagatgtcttgctttcccaatttacatgatttcttcttgaattacatcaaaa- 21060579  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || | ||||||| |||||| || |||| || | ||||||| ||||||||||||||||||||| |||| |    |||||||| ||||||| |||||||||    
T  21060578 -caccgtaaaattgctatgtatcagaaataatagaattataaactcaaatatagaaaacattaaaaatgtccaaaaatcatatgcaattgatctaatact 21060480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 229
Target Start/End: Original strand, 30356088 - 30356279
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnn 135  Q
    ||||||||||||| |||| ||||| ||||||  |  ||||| | |||  ||||||||||||||||||| ||||||||||| ||||||||||||           
T  30356088 tcttgaatcttcattcttgatcttcccaaagt-cttcataagtattcatatgtcttgctttgccgatttgcatgatttctccgtgaattacat--caaaa 30356184  T
Q  136 catcctaaaatttctatgtttcggaaagaacataattata-gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctcta 229  Q
    ||||||| ||||  |||||||||| || || | ||||| | |||||| ||||| ||||||||| |||| |  |||||||||| ||||||||||||    
T  30356185 catcctagaattgatatgtttcgggaataatagaattacatgactcatatatataaaacattataaatgtcccgaaatcataagcaattgctcta 30356279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 24389387 - 24389220
Alignment:
Q  70 ccacataaatcttcggatgtcttgctttgccgattg-catgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacat 168  Q
    ||||||||||||||  ||||||||||||  |||||  |||||||||||  ||||||||||        | ||||||||||||||||||    ||||| |     
T  24389387 ccacataaatcttcatatgtcttgctttttcgatttacatgatttctttatgaattacatcaagaag-accctaaaatttctatgttttcagaagaatag 24389289  T
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| ||| |||||||||||||||| || |||| |  |||||||||||||||||  ||||||||||||    
T  24389288 aattagagagtcaaatatagaaaacaatataaatgtcccgaaatcataggcaattaatctaatactcct 24389220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 31879025 - 31878926
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcg-aaatcataggcaattgctctaatactcct 237  Q
    ||||||||  ||||||||| ||||||| | ||||| | |||||||||||||||||||||||||| |  || ||||||||| |||||| ||||||| ||||    
T  31879025 cctaaaatagctatgtttcagaaagaatagaattacaaactcaaatatagaaaacattacaaatgtcccgaaaatcatagacaattgatctaatattcct 31878926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 24469724 - 24469822
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||  |||||||||| || |  ||||||| ||||||| |||||||||| ||||||||  |  |||||||||||||||| | ||||||||||||    
T  24469724 cctaaaattgttatgtttcgggaaaactataattacagactcatatatagaaaatattacaaaagtcccgaaatcataggcaatcgttctaatactcct 24469822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 229
Target Start/End: Original strand, 32759835 - 32759985
Alignment:
Q  79 tcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata-g 176  Q
    ||||| |||||||| | ||||||||| ||||||||||||||||||||||||       ||||||| |||| |||||||| || || |  | ||||| | |    
T  32759835 tcttcagatgtcttacattgccgatttgcatgatttcttcgtgaattacat--caaaacatcctagaattgctatgttttgggaaaagtagaattacatg 32759932  T
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctcta 229  Q
    |||||||| |||||||||||||| || | || |||||||| ||||||||||||    
T  32759933 actcaaatttagaaaacattacacatgtctcaaaatcataagcaattgctcta 32759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 9519688 - 9519756
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| |||||||||||||||| ||||||||||     | |||||||||||||||||||||||||||||    
T  9519688 aattacagactcaaatatagaacacattacaaaagccccaaaatcataggcaattgctctaatactcct 9519756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 17822246 - 17822097
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| |||||||||||||||||||||| |       | |  ||||| | ||||||||||| ||||  | ||||| | |||||||| ||    
T  17822246 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaaaccctattaaaactgctatgtttcgggaagactagaattacatactcaaattta 17822147  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||  |  | |||||||||||||| | ||||||||||||    
T  17822146 gaaaacattacaaaagtcccaaaatcataggcaatcgttctaatactcct 17822097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 18171394 - 18171326
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| |||||||||||||||||||||||||||  |  ||||||||||||||||   ||||||||||||    
T  18171394 aattacagactcaaatatagaaaacattacaaaagtcccgaaatcataggcaatcattctaatactcct 18171326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 9840904 - 9841015
Alignment:
Q  91 ttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatataga 189  Q
    |||||||||||||| || ||||||||||||||||||| |       || ||||||||| |||||||| || ||||  | ||||||||| |||||||||||    
T  9840904 ttgctttgccgatttgcttgatttcttcgtgaattac-tttaaaaacaccctaaaattgctatgttttgggaagactagaattatagagtcaaatataga 9841002  T
Q  190 aaacattacaaat 202  Q
    ||| |||||||||    
T  9841003 aaatattacaaat 9841015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 21687401 - 21687339
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc 100  Q
    ||||| ||||||| |||||||||| |||| |||||||||||||||||||||  |||||||||||    
T  21687401 tcttgtatcttcattcttcatcttcccaa-ggaccacataaatcttcggataccttgctttgcc 21687339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 23230136 - 23230058
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcatagg 218  Q
    ||||||||| | |||||||||||| || | ||||| ||| |||||||| ||||||||||||||  |||||||||||||||    
T  23230136 cctaaaattgccatgtttcggaaa-aatagaattacagattcaaatattgaaaacattacaaaagtttcgaaatcatagg 23230058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 8066608 - 8066674
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||| |||||||||||||||||| ||||||||  || ||||||||||| |||||  ||||||||||    
T  8066608 aattacagactcaaatatagaaaatattacaaaagttccgaaatcatagacaattattctaatactc 8066674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 14723610 - 14723672
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaa 201  Q
    ||||||||| ||||||||| |||| |  | ||||| |||||||||||||||||||||||||||    
T  14723610 cctaaaattgctatgtttcagaaaaactagaattacagactcaaatatagaaaacattacaaa 14723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 22845994 - 22845924
Alignment:
Q  167 ataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| | |||||||||||||||||||||||||  |  | |||| ||||||||||| ||||||||||||    
T  22845994 ataattacatactcaaatatagaaaacattacaaaactcccaaaattataggcaattgttctaatactcct 22845924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 23087279 - 23087181
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattata-gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    ||||||||  ||||||||||| ||||| | ||||  | |||| ||||||||||||||||| ||||||| | |||||||| ||||||  |||||||||||    
T  23087279 cctaaaatagctatgtttcgggaagaataaaatttcatgacttaaatatagaaaacattataaattttccaaaatcataagcaatttttctaatactcc 23087181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 24479978 - 24480048
Alignment:
Q  167 ataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| ||||||| ||||||||||||||||||| ||  ||||||||||| |||| | || |||||||||    
T  24479978 ataattacagactcacatatagaaaacattacaaaattcccgaaatcatagacaatcgttccaatactcct 24480048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 19594148 - 19594049
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcg--aaatcataggcaattgctctaatactcc 236  Q
    |||||||||  |||||||||| || |  | ||||| |||||||||||||||||||||||||||   | ||  |||||||||||||||| |||||||||||    
T  19594148 cctaaaattgttatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaaa-agtccgtaaaatcataggcaattgttctaatactcc 19594050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 10505043 - 10505087
Alignment:
Q  85 gatgtcttgctttgccgatt-gcatgatttcttcgtgaattacat 128  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  10505043 gatgtcttgttttgccgatttgcatgatttcttcgtgaattacat 10505087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 21152632 - 21152564
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| ||| |||||||||||||||||||||||  |  ||||||||||| |||| | ||||||||||||    
T  21152632 aattacagattcaaatatagaaaacattacaaaagtgccgaaatcatagacaatcgttctaatactcct 21152564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 23005379 - 23005319
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||| ||||||||||||||| |  |||||||||||||||| | |||||| |||||    
T  23005379 actcaaatatggaaaacattacaaatgtcccgaaatcataggcaatcgttctaatgctcct 23005319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 23782987 - 23783047
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||| ||||||||||||||| |  |||||||||||||||| | |||||| |||||    
T  23782987 actcaaatatggaaaacattacaaatgtcccgaaatcataggcaatcgttctaatgctcct 23783047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 27961086 - 27961130
Alignment:
Q  85 gatgtcttgctttgccgatt-gcatgatttcttcgtgaattacat 128  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||    
T  27961086 gatgtctttctttgccgatttgcatgatttcttcgtgaattacat 27961130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 11136880 - 11136927
Alignment:
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    |||||||||||||||||||||||||||  | ||||||||||| |||||    
T  11136880 agactcaaatatagaaaacattacaaaagtctcgaaatcatatgcaat 11136927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 10822103 - 10822152
Alignment:
Q  79 tcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacat 128  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||||||    
T  10822103 tcttcgtatgtcttgctttgccgatttgcatgatttcttcgt-aattacat 10822152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 20404229 - 20404191
Alignment:
Q  91 ttgctttgccgatt-gcatgatttcttcgtgaattacat 128  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  20404229 ttgctttgccgatttgcatgatttcttcgtgaattacat 20404191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 16175742 - 16175803
Alignment:
Q  176 gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||| ||||  |||||||| | | |||||||||| |||||||| ||||||||||    
T  16175742 gactcaaatataaaaaatgttacaaatatcttgaaatcatagacaattgctttaatactcct 16175803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 22411636 - 22411587
Alignment:
Q  79 tcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattac 126  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  22411636 tcttcggatgttcttgatttgccgatttgcatgatttcttcgtgaattac 22411587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 17379620 - 17379525
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||| |||||||| || || | || ||||| |||||||||||||| ||| ||||||||  | |||||||| |||| ||| | ||||||||||    
T  17379620 cctaaaattgctatgttttgggaaaaccagaattacagactcaaatatag-aaatattacaaaagtctcgaaatcgtagggaatcgttctaatactc 17379525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 39 - 240
Target Start/End: Original strand, 14271668 - 14271868
Alignment:
Q  39 ttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnnnca 137  Q
    ||||||||||||||||  |||| |||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||       ||    
T  14271668 ttgaatcttcaatctttgtcttgccaa-ggaccacattaatcttcggatgtcttgctttgccaatttgcatgatttcttcgtgaattacat-caagaaca 14271765  T
Q  138 tcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
     ||||||||||||||||||||| || |   | |||| | ||||||||||||||||||| |||||| |  | ||||||||||||||| |||||||||||||    
T  14271766 ccctaaaatttctatgtttcgggaaaactctgattacatactcaaatatagaaaacatcacaaatgtcccaaaatcataggcaattactctaatactcct 14271865  T
Q  238 ttg 240  Q
    |||    
T  14271866 ttg 14271868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 22501658 - 22501857
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||||| ||| |||| |||| |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||          
T  22501658 ctcttgaatcttcaatattcgtcttcccaa-ggacaacataaatcttcggatgtcttgctttgccgatttgcatgatttattcgtgaattacat-caaga 22501755  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || |||||||||  |||||||||| || |   | |||| ||||||||||||||||| ||||||||| || || ||||||||||| ||| ||||||||||    
T  22501756 acaccctaaaattgttatgtttcgggaaaactctgattacagactcaaatatagaaagcattacaaa-ttctcaaaatcataggcgattactctaatact 22501854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 24381599 - 24381399
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| ||||||||||  ||| ||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||          
T  24381599 ctcttgaatcttcattcttcatcttcgcaa-ggaccacgtaaatcttcggacgtcttgctttgccgatttgcatgatttcttcgtgaattacat-caaaa 24381502  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || ||||||||| ||||||| ||| || || | ||||| |||||||||||||||||||| ||||||  |  |||| ||||||||||||| |  ||||||    
T  24381501 acaccctaaaattgctatgttacgggaataatagaattacagactcaaatatagaaaacaatacaaaagtaccgaagtcataggcaattgttaaaatact 24381402  T
Q  235 cct 237  Q
    |||    
T  24381401 cct 24381399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 19785053 - 19784853
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtctt-gctttgccgatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||||||| |||| | ||||||||| |||||  ||||||| |||||| ||||| ||||||||||||||||||||||||         
T  19785053 ctcttgaatcttcattcttcatcttcccaatg-accacataa-tcttcacatgtctttgctttgtcgatttgcatgatttcttcgtgaattacatcaaaa 19784956  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| |||| |||| | ||||||| ||||| | |||||||||||||||||||||||||| |  | |||| ||||||||||||||| ||||    
T  19784955 a-caccctaaaattgctatatttcaggaagaacagaattacatactcaaatatagaaaacattacaaatatcccaaaattataggcaattgctcttatac 19784857  T
Q  234 tcct 237  Q
    ||||    
T  19784856 tcct 19784853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 30117931 - 30117731
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||||| |||| ||| ||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||| |          
T  30117931 ctcttgaatcttcattcttcatcttcccaa-ggatcacgtaaatctttggatgtcttgctttgccaatttgcatgatttcttcgtgaattacct-caaga 30117834  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || ||||||||| ||||||||  | ||||| | ||||| | |||||||||||||||||| ||| ||| |  ||||||||||| ||||| |||||||| |    
T  30117833 acaccctaaaattgctatgtttaaggaagaatagaattacatactcaaatatagaaaacaatacgaatatcccgaaatcatagacaatttctctaatatt 30117734  T
Q  235 cct 237  Q
    |||    
T  30117733 cct 30117731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 24380626 - 24380426
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||||| |||| ||    || |||||||| |||||| | |||||| ||| |||||||||| ||| ||||||||||          
T  24380626 ctcttgaatcttcattcttcatcttaccaa-ggtgttcacaaatcttcagatgtcatcctttgctgatatgcatgatttattcatgaattacatcaagaa 24380528  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || ||||||||| |||||||| || ||||| | ||||| |||||||||||||||||||| || |||| || |||||||||||||||||| |||||||||    
T  24380527 -caccctaaaattgctatgttttgggaagaatagaattacagactcaaatatagaaaacaatagaaatgttccgaaatcataggcaattgttctaatact 24380429  T
Q  235 cct 237  Q
    |||    
T  24380428 cct 24380426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 7984939 - 7985141
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| ||||||||||| | |||| |  |||||||||| ||||||||||||||||| || |||| ||||||||||||||||||| |         
T  7984939 ctcttgaatcttcattcttcatcttttccaaggtctgcataaatctttggatgtcttgctttgcctgatttgcttgatttcttcgtgaattac-ttcaag 7985037  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| ||||||||||  ||||| | ||||| | ||| |||||||| ||||||||||||  ||  |||||||||| |||||| | ||||||    
T  7985038 aacaccctaaaattgctatgtttcgagaagaatagaattacatactaaaatatagtaaacattacaaaagttatgaaatcatagacaattgatttaatac 7985137  T
Q  234 tcct 237  Q
    ||||    
T  7985138 tcct 7985141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 77 - 238
Target Start/End: Original strand, 30832802 - 30832964
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    |||||| |||||| |||| |||||||||| |||||||||||||||||||||| |       | |||||||||| |||||||||||||| |  | |||||     
T  30832802 aatctttggatgttcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaaacc-tcctaaaattgctatgtttcggaaaaactagaattac 30832900  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    | ||||||| |||||||||||||||||| ||  |||||||||| ||||||||||||||||||||    
T  30832901 aaactcaaacatagaaaacattacaaatgttctgaaatcatagacaattgctctaatactcctt 30832964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 236
Target Start/End: Original strand, 17835367 - 17835566
Alignment:
Q  36 ctcttgaatcttcaat-cttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||||| ||||||||| |||||| ||  || || ||||| ||||||||||||| | ||| |||||||||| |||||||||||||          
T  17835367 ctcttgaatcttcaattcttcatcttcccaaag-acttcacaactcttcagatgtcttgctttactgatatgcatgattttttcgtgaattaca--acaa 17835463  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      |||||||||||||||||||||| | ||||| ||||||| | ||| ||||||||||||  |||||||| |  |||||||||| | ||||| ||||||||    
T  17835464 aacatcctaaaatttctatgtttcaggaagaatataattacaaacttaaatatagaaaatgttacaaatgtcccgaaatcataagaaattgttctaatac 17835563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 38 - 237
Target Start/End: Complemental strand, 4007423 - 4007224
Alignment:
Q  38 cttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga--ttgcatgatttcttcgtgaattacatnnnnnnn 135  Q
    |||||||||||| |||||||| || ||| |||||| || ||||||||||| |||||||||||| |  |||  ||||||||||||||||| |||           
T  4007423 cttgaatcttcattcttcatcctttcaa-ggaccatatcaatcttcggatatcttgctttgcctaatttgtttgatttcttcgtgaatttcatcaagaa- 4007326  T
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    || ||||||||| ||||||||||| ||||| | ||||| ||||| |||||||||||||| ||||||  | || ||||||| | |||||| ||||||||||    
T  4007325 caccctaaaattgctatgtttcgggaagaatagaattacagacttaaatatagaaaacaatacaaacgtctcaaaatcattgacaattgatctaatactc 4007226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 37527196 - 37527101
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||| ||||| || || ||||| | |||||||||||||||||||||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  37527196 ctaaaattgctatgctttgggaagaatagaattatagactcaaatatagaaaacattacaaatgtcccgaaaccataggcaattgctctaatactc 37527101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 24851165 - 24851017
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata-gactcaaatat 186  Q
    |||||||||||||||| ||||||||| || |||||||||||       |||||||||||| |||||||| || ||||| | ||||||| ||||||||| |    
T  24851165 tcttgctttgccgatttgcatgatttatttgtgaattacatcaaaa--catcctaaaattgctatgttttgggaagaatagaattatatgactcaaatgt 24851068  T
Q  187 agaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||| ||  ||||||||| ||||||| | ||||||||||    
T  24851067 agaaaacattacaaatgttctgaaatcataagcaattgttataatactcct 24851017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 202
Target Start/End: Original strand, 2638543 - 2638709
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| ||||||| || |||| || |||| |||||||||||||||||||||||||| || |||  ||||||||||||||||||| |         
T  2638543 ctcttgaatcttcactcttcatattcccaa-ggtccacgtaaatcttcggatgtcttgctttgcctgatttgtttgatttcttcgtgaattac-tttaag 2638640  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaat 202  Q
      || ||||||||| ||||||||||| ||||| |  |||| | ||| ||||||||||||||||||||||    
T  2638641 aacaccctaaaattgctatgtttcgggaagaatagtattacatacttaaatatagaaaacattacaaat 2638709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 15058776 - 15058579
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| ||||||| ||||| ||||    || |||||||  ||||||||||||||| ||| | |||||||||||| |||||||||           
T  15058776 ctcttgaatcttcattcttcat-tttcccaaggttttcacaaatctttagatgtcttgctttgctgatatacatgatttcttcatgaattacaacaaaat 15058678  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
      ||||||||||| |||||||| || || || | ||||| |||||||||||||||||||||||  ||| |  |||||||||| |||||||||||||||||    
T  15058677 --atcctaaaattgctatgttttgggaataatagaattaaagactcaaatatagaaaacattaacaatgtcccgaaatcataagcaattgctctaatact 15058580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 25481646 - 25481578
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||    
T  25481646 aattacagactcaaatatagaaaacattacaaaagtttcgaaatcataggcaatcgttctaatactcct 25481578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 6886625 - 6886692
Alignment:
Q  170 attatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||| |||||||||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||    
T  6886625 attacagactcaaatatagaaaacattacaaatgtcccgaaatcataggcaattactctaatactcct 6886692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 25180995 - 25180794
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga--ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| | |||||||| |  |||||| ||||||||||||  ||||||||| | ||| |  |||| |||||||||||||||||||||         
T  25180995 ctcttgaatcttcatttttcatcttcctgaaggactacataaatcttcaaatgtcttgcgt-gcctaaattgcttgatttcttcgtgaattacatcaaga 25180897  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
        || |||||||||||| ||||    |||| | ||||||||||| |||||||||||||||||| ||  |  |||||||||||||||||| ||||||||    
T  25180896 atgctc-taaaatttctatctttcacgtagaatagaattatagacttaaatatagaaaacattacgaacgtcccgaaatcataggcaattgatctaatac 25180798  T
Q  234 tcct 237  Q
    ||||    
T  25180797 tcct 25180794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 28904190 - 28904040
Alignment:
Q  87 tgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata-gactcaaat 184  Q
    |||||||||||||||||| ||||||||| ||||||||||||||       |||| || |||| ||||||||| | || || ||||||| | |||||||||    
T  28904190 tgtcttgctttgccgatttgcatgatttgttcgtgaattacatcaaaa--catcatataattgctatgtttcaggaaaaatataattacatgactcaaat 28904093  T
Q  185 atagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||| |  |||||||||| |||||   ||||||||||||    
T  28904092 atagaaaacattacaaatgtcccgaaatcataagcaatgtttctaatactcct 28904040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 34499172 - 34499237
Alignment:
Q  150 tatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcat 215  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||||||||||| || |||||||    
T  34499172 tatgtttcgggaagactataattatagactcaaatatagaaaacattacaaatttctcaaaatcat 34499237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 19265687 - 19265846
Alignment:
Q  79 tcttcggatgt-cttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatag 176  Q
    ||||||||||| |||| ||| ||||| ||||||||||||||||||||||| |       |  ||||||||| ||||||||||| || |  | ||||| ||    
T  19265687 tcttcggatgttcttgatttcccgatatgcatgatttcttcgtgaattacttcaaaaaccc-cctaaaattgctatgtttcgggaaaactagaattacag 19265785  T
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    | ||||||||||| |||||||||||  |  |||||||||||||||||| ||||||||||||    
T  19265786 attcaaatatagacaacattacaaaagtcccgaaatcataggcaattgttctaatactcct 19265846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 13833747 - 13833677
Alignment:
Q  167 ataattata-gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    ||||||||| |||| |||||||||||||||||||||| |  |||||||||| |||||||||||||||||||    
T  13833747 ataattatatgactaaaatatagaaaacattacaaatgtcccgaaatcataagcaattgctctaatactcc 13833677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 20400260 - 20400358
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  ||||||| | |||||||||||||||||||||||||  |  |||||||||||| ||| | ||||||||||||    
T  20400260 cctaaaattgctatgtttcgggaaaactataattacaaactcaaatatagaaaacattacaaaagtcccgaaatcataggaaatcgttctaatactcct 20400358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 5856604 - 5856803
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||||  ||||| |||  || |||||||| ||||||||| |||| |||| || || ||||||||||||||||||           
T  5856604 ctcttgaatcttcattcttcatctccccaaa-gacttcacaaatcttcagatgtcttgatttgtcgatatgtattatttcttcgtgaattaca--acaaa 5856700  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     |||||| |||||  |||||||| |||  || | ||||| |||||||||| ||||||||||||||||| |  ||||| ||||  |||||| ||||||| |    
T  5856701 acatccttaaattgttatgtttcagaagaaatagaattacagactcaaatgtagaaaacattacaaatgtcccgaaaccataaacaattgatctaatatt 5856800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 15176652 - 15176505
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| |||||||||||||||||||||| |       |  ||||||||| |||||||| || || |  | ||||| |||||||||||||    
T  15176652 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaaacc--cctaaaattgctatgttttgggaaaactagaattacagactcaaatata 15176555  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| |||||  |  |||||||||||||||| | ||||||||||||    
T  15176554 gaaaacataacaaaagtcccgaaatcataggcaatcgttctaatactcct 15176505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 17980665 - 17980811
Alignment:
Q  85 gatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaa 183  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||       ||||||| |||| ||||||||||  ||||| | || || | |||||||    
T  17980665 gatgtcttgatttgccgatttgcatgattttttcgtgaattacatcaaaaa-catcctagaattgctatgtttcgtgaagaatagaactacaaactcaaa 17980763  T
Q  184 tatagaaaacattacaaatttttcgaaatcataggcaattgctctaat 231  Q
    ||||||||||||| ||||| |  | |||||||| ||||||| ||||||    
T  17980764 tatagaaaacattgcaaatgtcccaaaatcataagcaattgttctaat 17980811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 18447032 - 18446932
Alignment:
Q  139 cctaaaatttctatgtttcggaaaga--acataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    ||||||||| ||||||||||| || |  | | ||||||||||||||| |||||||||||||||||  || |||||||||||| ||| | |||||||||||    
T  18447032 cctaaaattgctatgtttcggtaaaactagaaaattatagactcaaacatagaaaacattacaaaagttccgaaatcataggaaatggttctaatactcc 18446933  T
Q  237 t 237  Q
    |    
T  18446932 t 18446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 24109175 - 24109106
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    ||||| |||||||||||||||||||||| ||||  |  |||||||||||| |||||||||||||||||||    
T  24109175 aattacagactcaaatatagaaaacatttcaaaagtcccgaaatcataggaaattgctctaatactcctt 24109106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 24908827 - 24908928
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||| ||||||| |||||||| || || || | ||||| | |||||||||||||||||||||||||| ||||||||||| | | ||||| ||||||| ||    
T  24908827 catcataaaattgctatgttttgggaataatagaattacaaactcaaatatagaaaacattacaaatgtttcgaaatcaaaagtaattgatctaatattc 24908926  T
Q  236 ct 237  Q
    ||    
T  24908927 ct 24908928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 24911048 - 24911149
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||| ||||||| |||||||| || || || | ||||| | |||||||||||||||||||||||||| ||||||||||| | | ||||| ||||||| ||    
T  24911048 catcataaaattgctatgttttgggaataatagaattacaaactcaaatatagaaaacattacaaatgtttcgaaatcaaaagtaattgatctaatattc 24911147  T
Q  236 ct 237  Q
    ||    
T  24911148 ct 24911149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 13313404 - 13313344
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||    
T  13313404 actcaaatatagaaaacattacaaaagtcccgaaatcataggcaattgttctaatactcct 13313344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 14076986 - 14077146
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    |||||||| |||||||||| ||| ||||| ||||||||||||| ||||||||||       || | ||||||| ||||||||  | ||||| | ||| |     
T  14076986 aaatcttcagatgtcttgcattgtcgatttgcatgatttcttcatgaattacatcaaaa--caccataaaattgctatgttttaggaagaatagaataac 14077083  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    | |||||||||||||||| ||||||||| |  | |||||||| ||||||| ||||||||||||    
T  14077084 atactcaaatatagaaaatattacaaatgtcccaaaatcataagcaattgatctaatactcct 14077146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 24388592 - 24388445
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| |||||||||||||||||||||| |       |  ||||||||| ||||||||||| || |  ||||||| ||| |||||||||    
T  24388592 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaaaccc-cctaaaattgctatgtttcgggaaaactataattacaga-tcaaatata 24388495  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||  |  | |||||||||||||| | ||||||||||||    
T  24388494 gaaaacattacaaaagtcccaaaatcataggcaatcgttctaatactcct 24388445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 26139752 - 26139812
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||  || |||||||||||||||| | ||||||||||||    
T  26139752 actcaaatatagaaaacattacaaaagttccgaaatcataggcaatcgttctaatactcct 26139812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 24091019 - 24090953
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||| ||||||||||||||||||||||||||   |  |||||||||||||||||| ||||||||||    
T  24091019 aattacagactcaaatatagaaaacattacaagagtcccgaaatcataggcaattgttctaatactc 24090953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 24518801 - 24518663
Alignment:
Q  95 tttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaac 193  Q
    |||||||||| |||||||||||| |||||||||||       || | |||||||  |||||||| | ||||| ||||||| ||| | |||||||||||||    
T  24518801 tttgccgatttgcatgatttctttgtgaattacatgaaaa--caccttaaaattgttatgtttcaggaagaatataattacagaattaaatatagaaaac 24518704  T
Q  194 attacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    ||||||||| ||  ||||||||| ||||||||  |||||||    
T  24518703 attacaaatattctgaaatcataagcaattgcattaatact 24518663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 30487670 - 30487817
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||| |||| |||| |  || |||||| | ||||||||| ||||||||| |||||||||| |||||||||||||           
T  30487670 ctcttgaatcttcattcttcatc-ttcccaagggcttcacaaatctccagatgtcttgttttgccgatatgcatgattttttcgtgaattaca--acaaa 30487766  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaata 185  Q
     ||||||||||||  | |||||||| ||||| ||||||  |||||||||||    
T  30487767 acatcctaaaattgttgtgtttcgggaagaatataatttcagactcaaata 30487817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 21316709 - 21316769
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattaca 199  Q
    ||||||||| ||||||||||| || |  | |||||||||||||||||||||||||||||||    
T  21316709 cctaaaattgctatgtttcgggaaaactagaattatagactcaaatatagaaaacattaca 21316769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 24583302 - 24583244
Alignment:
Q  179 tcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||  |  |||||||||||||||| | ||||||||||||    
T  24583302 tcaaatatagaaaacattacaaaagtcccgaaatcataggcaatcgttctaatactcct 24583244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 28621560 - 28621626
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||| ||||||||||||||||||||||| |||  |  |||||||||||||||| | ||||||||||    
T  28621560 aattacagactcaaatatagaaaacattaaaaaagtcccgaaatcataggcaatcgttctaatactc 28621626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 26888413 - 26888474
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaa 201  Q
    |||||||| ||||||||||| || | |||||||| ||||||||||||| ||| |||||||||    
T  26888413 ctaaaattgctatgtttcgggaaaaccataattacagactcaaatataaaaaccattacaaa 26888474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 19791349 - 19791417
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| ||||||||||||| |||| ||||||||| |  ||||||||||| |||||| | ||||||||||    
T  19791349 aattacagactcaaatataaaaaatattacaaatgtcccgaaatcatagacaattgttttaatactcct 19791417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 24389720 - 24389780
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||||| ||||||| ||  | |||| ||||||||||| ||||||||||||    
T  24389720 actcaaatatagaaaactttacaaaattcccaaaattataggcaattgttctaatactcct 24389780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 28858700 - 28858752
Alignment:
Q  77 aatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacat 128  Q
    ||||||| ||||||||| ||||||||| || ||||||||||||||||||||||    
T  28858700 aatcttcagatgtcttgatttgccgatctgtatgatttcttcgtgaattacat 28858752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 17510832 - 17510928
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||| || ||||||||||| || |  | ||||| |||||||||||  |||||||||| |||  || |||||||||||||||| | ||||||||||||    
T  17510832 cctaaagttgctatgtttcgggaaaactagaattacagactcaaata--gaaaacattataaaagttccgaaatcataggcaatcgttctaatactcct 17510928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 18007500 - 18007555
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    ||||||||| |||||||||||||||| ||||||  |||||| |||||| |||||||    
T  18007500 actcaaataaagaaaacattacaaatgtttcgatgtcatagacaattgttctaata 18007555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 17100347 - 17100294
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    ||||| ||||||||||||||||||||||| |||  || ||||||||| ||||||    
T  17100347 aattacagactcaaatatagaaaacattataaaagttccgaaatcattggcaat 17100294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 24908771 - 24908812
Alignment:
Q  84 ggatgtcttgctttgccgat-tgcatgatttcttcgtgaatt 124  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  24908771 ggatgtcttgctttgccgatatgcatgatctcttcgtgaatt 24908812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 24910992 - 24911033
Alignment:
Q  84 ggatgtcttgctttgccgat-tgcatgatttcttcgtgaatt 124  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  24910992 ggatgtcttgctttgccgatatgcatgatctcttcgtgaatt 24911033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 26829687 - 26829650
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaatta 125  Q
    |||||||||||||||| |||||||||||||||||||||    
T  26829687 tcttgctttgccgatttgcatgatttcttcgtgaatta 26829650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 35861695 - 35861642
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacat 128  Q
    |||||||| ||||| ||| |||||||||| |||||||||||| |||||||||||    
T  35861695 aaatcttcagatgttttgttttgccgatttgcatgatttctttgtgaattacat 35861642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 6286221 - 6286289
Alignment:
Q  149 ctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcatag 217  Q
    ||||||||||| || || | ||||| ||||||||||||| |||| ||||||||| |  |||||||||||    
T  6286221 ctatgtttcgggaataatagaattacagactcaaatataaaaaagattacaaatgtcccgaaatcatag 6286289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 17998210 - 17998278
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| |||||| ||||||||||||||||||||  |   ||||||||||||||| | ||||| ||||||    
T  17998210 aattacagactcgaatatagaaaacattacaaaagtcctgaaatcataggcaatcgttctaacactcct 17998278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 18570485 - 18570517
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaa 201  Q
    ||||| |||||||||||||||||||||||||||    
T  18570485 aattacagactcaaatatagaaaacattacaaa 18570517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 29765627 - 29765575
Alignment:
Q  76 aaatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattac 126  Q
    |||| ||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  29765627 aaatattcggatgttcttgatttgccgatttgcatgatttcttcgtgaattac 29765575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 18735543 - 18735349
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| |||| || |||||||||||||| |||||||||||          
T  18735543 ctcttgaatcttcattcttcttctttccaa-ggaccacataaatcttcggatgtcttgcattgctgatttgcatgatttctttgtgaattacat-caaga 18735446  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaat 231  Q
     || ||||||||| ||||||| ||  ||||| ||||||| ||||| |||||||||||||| ||||||| |  ||||||||||| ||||| |||||||    
T  18735445 acaacctaaaattgctatgttccgagaagaatataattacagactgaaatatagaaaacaatacaaatgtcccgaaatcatagacaattactctaat 18735349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 5509893 - 5510093
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||| ||||||||  |||| |||| |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||          
T  5509893 ctcttgaatcgtcaatctttgtcttcccaa-ggaccacataaatcttgggatgtcttgcttttccgatttgcatgatttcttcgtgaattacat-caaga 5509990  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     |||||||||||| ||||||||||| || |   | ||||||||||||||||||||||||||||||||| |   ||||| ||||| |||| || |||||||    
T  5509991 acatcctaaaattgctatgtttcgggaaaactctgattatagactcaaatatagaaaacattacaaatgtcctgaaattataggaaattactttaatact 5510090  T
Q  235 cct 237  Q
    |||    
T  5510091 cct 5510093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 39 - 237
Target Start/End: Complemental strand, 22470675 - 22470475
Alignment:
Q  39 ttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgt-gaattacatnnnnnnn- 135  Q
    ||||||||||| |||||||||| |||| | ||||||||||||||||||||||||| ||||| |||| |||||||||||| || |||||||||            
T  22470675 ttgaatcttcattcttcatcttcccaa-gaaccacataaatcttcggatgtcttgttttgctgatttgcatgatttctttgttgaattacattaaaaaaa 22470577  T
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||||||| |||||||||   ||||||| ||||| ||||||||||||| |||||||||||||| |  |||||||||| ||||||||||||| ||||    
T  22470576 catcctaaaattgctatgtttcacgaagaacagaattacagactcaaatataaaaaacattacaaatgtcacgaaatcatatgcaattgctctaacactc 22470477  T
Q  236 ct 237  Q
    ||    
T  22470476 ct 22470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 237
Target Start/End: Original strand, 22246820 - 22247021
Alignment:
Q  35 tctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||| |||||||| |||||||||| |||| | ||   | ||||||| |||| ||||||||||||||| | |||||||||||||||||||||||         
T  22246820 tctcttaaatcttcattcttcatcttcccaa-gaacttaacaaatctttggatatcttgctttgccgatatacatgatttcttcgtgaattacatcaaaa 22246918  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      |||||||||||||||||||||  | ||||||| ||||| ||||| |||||||||||||||||||||| |  | ||||||||| |||||||||||||||    
T  22246919 a-catcctaaaatttctatgttttaggaagaacagaattacagacttaaatatagaaaacattacaaatgtcccaaaatcatagtcaattgctctaatac 22247017  T
Q  234 tcct 237  Q
    ||||    
T  22247018 tcct 22247021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 13906856 - 13906656
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaatt-acatnnnnn 133  Q
    ||||||||||| || |||| ||||| |||| ||||| |||||| |||| ||||||||  ||||||||| ||||||||||||| ||||||| |||          
T  13906856 ctcttgaatctccattctttatcttcccaa-ggacctcataaaccttcagatgtcttagtttgccgatatgcatgatttctttgtgaatttaca--acaa 13906760  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      |||||||||||| ||||||||||| ||||| | ||||| |||||||||||||||||||||||||||| |  |||||||||| ||||||| ||||||||    
T  13906759 aacatcctaaaattgctatgtttcgggaagaatagaattacagactcaaatatagaaaacattacaaatgtcccgaaatcataagcaattgatctaatac 13906660  T
Q  234 tcct 237  Q
    ||||    
T  13906659 tcct 13906656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 3114947 - 3114782
Alignment:
Q  72 acataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataa 170  Q
    ||||||||||||  ||||||||||||| ||||| ||||||||||||||||||| ||||       || ||||||||| ||||||||||| || |   | |    
T  3114947 acataaatcttcatatgtcttgctttgtcgatttgcatgatttcttcgtgaataacatcaagaa-caccctaaaattgctatgtttcgggaaaattctga 3114849  T
Q  171 ttatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||| | |||||||||||||||||||| ||||| | |||||||||||||||||| |||||||||||||    
T  3114848 ttaaaaactcaaatatagaaaacatttcaaatatctcgaaatcataggcaattactctaatactcct 3114782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 8448728 - 8448826
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| | ||||||||| ||||||| || || | |||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  8448728 cctaaaattgccatgtttcggtaagaacaaaaatacaaactcaaatatagaaaacattacaaatatctcgaaatcataggcaattgctataatactcct 8448826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 202
Target Start/End: Original strand, 6075795 - 6075960
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnn 134  Q
    |||||||||||||| |||||||||| |||| |  |  || | ||||||||||||||||| ||||| || |||||||||||||||||||||  |           
T  6075795 ctcttgaatcttcattcttcatcttcccaa-gatcttcacagatcttcggatgtcttgcattgcctatatgcatgatttcttcgtgaattt-acgacaaa 6075892  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaat 202  Q
     |||||||||||||||| ||||| ||||||||||||||| | |||||||||| |||||||||||||||    
T  6075893 acatcctaaaatttctaagtttcagaaagaacataattacatactcaaatatggaaaacattacaaat 6075960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 20886732 - 20886892
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||       | |  ||||||| | ||||||||| ||||| | ||||||    
T  20886732 aaatcttcatatgtcttgctttgccgatttgcatgatttcttcgtgaattacatcaaaacgcct--taaaattgccatgtttcgggaagaatagaattat 20886829  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||||||||  |||||| |  |||||||||| || |||||  ||||||||||    
T  20886830 agactcaaatatagaaaacaaaacaaatgtcccgaaatcataagcgattgcgttaatactcct 20886892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 17134915 - 17135116
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgcttt-gccga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||||||| | |||||||  |||| || | |||||||||||||||||||||         
T  17134915 ctcttgaatcttcattcttcatcttcccaaa-gaccacataaatcttcggatattttgctttacccgattttcttgatttcttcgtgaattacat-caag 17135012  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||| ||||| ||||||||||| || || | ||||| | |||||||||||||||||| ||||||| |   |||||||||| |||||  | ||||||    
T  17135013 aacacccttaaattgctatgtttcgggaataatagaattacatactcaaatatagaaaacaatacaaatgtccggaaatcatagacaattaatataatac 17135112  T
Q  234 tcct 237  Q
    ||||    
T  17135113 tcct 17135116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 27073879 - 27073976
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| ||||||||||| || |  | ||||| ||||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||    
T  27073879 ctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaaaatttccgaaatcatagggaattgttctaatactcct 27073976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 16223315 - 16223515
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgattgc-atgatttcttcgtgaattacatnnnnnn 134  Q
    ||||| |||||| ||||||| |||| || | |||| ||||||||||| ||||||| ||||||| | ||| | ||||||||||||||||||||||          
T  16223315 ctctttaatctttaatcttcgtcttcccta-ggacaacataaatctttggatgtcatgctttgtcaatttccatgatttcttcgtgaattacatcaagaa 16223413  T
Q  135 ncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
     || ||||||||||||||||||||| || |   |||||| | ||||||||||||||||||||| |||| |    |||||||||| |||| ||||||||||    
T  16223414 -caccctaaaatttctatgtttcgggaaaactctaattacatactcaaatatagaaaacattataaatgtcctaaaatcataggaaatttctctaatact 16223512  T
Q  235 cct 237  Q
    |||    
T  16223513 cct 16223515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 3429395 - 3429297
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||||||||| ||||| | ||||| ||||||||||||| ||| ||||||| || |  |||||||||| |||||| |||||||||||||    
T  3429395 cctaaaatttctatgtttcgggaagaataaaattacagactcaaatataaaaatcattacagatgtcccgaaatcatatgcaattcctctaatactcct 3429297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 218
Target Start/End: Complemental strand, 19388120 - 19387942
Alignment:
Q  39 ttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnnnnca 137  Q
    ||||| ||||| |||| ||||| |||| | |||||||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||       ||    
T  19388120 ttgaagcttcattcttaatcttcccaa-gcaccacataaatctttggatgtcttgctttcccgatttgaatgatttcttcgtgaattacat-caagaaca 19388023  T
Q  138 tcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcatagg 218  Q
     | |||||||  ||||||| || ||||| | ||||| |||||||||||||||||||| || |||| | || ||||||||||    
T  19388022 ccataaaattgatatgttttgggaagaatagaattacagactcaaatatagaaaacaatataaatatctcaaaatcatagg 19387942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 31284125 - 31283978
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    |||||||||||||||| ||||||||||||||| ||||||||       || ||||||||| |||||||| || || || | ||||| |||||||||||||    
T  31284125 tcttgctttgccgatttgcatgatttcttcgtcaattacatcaaaaa-caccctaaaattgctatgttttgggaataatagaattacagactcaaatata 31284027  T
Q  188 gaaaa-cattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
     |||| |||||||||| |  |||||||||| ||||||||||||||||||    
T  31284026 aaaaaacattacaaatgtcccgaaatcataagcaattgctctaatactc 31283978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 235
Target Start/End: Complemental strand, 28326364 - 28326209
Alignment:
Q  79 tcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattataga 177  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| ||||||||       || ||||||||  ||||||||||| ||||| | |||   |||    
T  28326364 tcttcagatgtcttgcattgccgatttgcatgatttcttcgtcaattacatcaaaa--caccctaaaataactatgtttcgggaagaatagaatcgcaga 28326267  T
Q  178 ctcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||| |||||||||| ||||| |  |||||||||| |||||| |||||||||||    
T  28326266 ctcaaatacagaaaacattccaaatgtcccgaaatcataagcaatttctctaatactc 28326209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 8145174 - 8145272
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  ||||||| | |||||||||||||||||||||||||  |  |||||||||||||||||| | ||||||||||    
T  8145174 cctaaaattgctatgtttcgggaaaactataattacatactcaaatatagaaaacattacaaaagtcccgaaatcataggcaattgttttaatactcct 8145272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 27412800 - 27412732
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| |||||||||||||||||||||||||||  || |||||||||||||||||| | ||||||||||    
T  27412800 aattacagactcaaatatagaaaacattacaaaagttccgaaatcataggcaattgttttaatactcct 27412732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 18535696 - 18535799
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    |||||||||| |||  ||||| || || | |||||||||||| ||||||||||||| ||||||| |  |||||||||| ||||||| ||||||||||||     
T  18535696 cctaaaatttttatacttcgggaataatagaattatagactcgaatatagaaaacaatacaaatgtcccgaaatcataagcaattgatctaatactcctc 18535795  T
Q  239 tgct 242  Q
    ||||    
T  18535796 tgct 18535799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 7805696 - 7805766
Alignment:
Q  167 ataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| |||||||||||| ||||||||||||||| | || |||||||| | ||||||||||||||||||    
T  7805696 ataattaaagactcaaatattgaaaacattacaaatgtatcaaaatcataagtaattgctctaatactcct 7805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 19533712 - 19533802
Alignment:
Q  143 aaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
    ||||| ||||||||||| || |  | ||||| |||||||||||||||||||||||||||  | ||||||||||||||||| | ||||||||    
T  19533712 aaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaaaagtctcgaaatcataggcaatcgttctaatac 19533802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 20891916 - 20891825
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga--ttgcatgatttcttcgtgaattac 126  Q
    |||||||||||||| ||||||||||  ||| || ||||||||||||||| |||||||| |||||| |  |||| |||||||||||||||||||    
T  20891916 ctcttgaatcttcattcttcatcttcacaa-ggtccacataaatcttcgaatgtcttgttttgcctaatttgcttgatttcttcgtgaattac 20891825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 18457244 - 18457184
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||    
T  18457244 actcaaatatagaaaacattacaaaagtcccgaaatcataggcaattgttctaatactcct 18457184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 820118 - 819919
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaatt-acatnnnnn 133  Q
    |||||||||||| | ||||||||||||||| |||   |  |||||||| |||||||||||||| |||| |||||||||||||| ||| || |||          
T  820118 ctcttgaatcttaattcttcatctttccaa-ggatttcccaaatcttcagatgtcttgctttgtcgatatgcatgatttcttcttgattttaca--acaa 820022  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      |||||||||||| ||||||||||| || || | ||||| ||  ||||||||| |||||||| ||||| |  |||||||||| |||| || ||||||||    
T  820021 atcatcctaaaattgctatgtttcgggaataatagaattacagt-tcaaatataaaaaacatttcaaatatcccgaaatcataagcaaatgatctaatac 819923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 14977732 - 14977830
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| | ||||||||||| || |  | ||||| | |||||||||||||||||||||||||  |  |||||||||||||||||| | ||||||||||    
T  14977732 cctaaaaatgctatgtttcgggaaaactagaattacatactcaaatatagaaaacattacaaaagtcccgaaatcataggcaattgttataatactcct 14977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 8765630 - 8765698
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| |||||||||||||||||||||||||||  |  |||||||||||| ||| | ||||||||||||    
T  8765630 aattacagactcaaatatagaaaacattacaaaagtcccgaaatcataggaaatcgttctaatactcct 8765698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 8770528 - 8770588
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||  || |||||||||||| ||| | ||||||||||||    
T  8770528 actcaaatatagaaaacattacaaaagttccgaaatcataggaaatcgttctaatactcct 8770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 12372503 - 12372405
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||| | ||||  | ||||| ||||||||||| |||||||||||||||| |  | ||||||||||  | || ||||||||||||    
T  12372503 cctaaaattactatgtttctggaagactagaattacagactcaaatacagaaaacattacaaatgtcccaaaatcataggtcactgttctaatactcct 12372405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 16228515 - 16228417
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||||||||| || |  | ||| | | ||||||||||||||||||| |||||  |  | |||||||||||||| | ||||||||||||    
T  16228515 cctaaaatttctatgtttcgggaaaattagaatcacaaactcaaatatagaaaacatgacaaaagtcccaaaatcataggcaatagttctaatactcct 16228417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 27853188 - 27853096
Alignment:
Q  36 ctcttgaatcttcaatctt-catctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattaca 127  Q
    |||||||||||||| |||| |||||| || |||| |  || ||||||||  |||||||||||||||||| |||||||||||||| |||||||||    
T  27853188 ctcttgaatcttcattctttcatctt-cctaaggtcttcacaaatcttcatatgtcttgctttgccgatatgcatgatttcttcatgaattaca 27853096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 16242362 - 16242265
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    ||||||||| ||||||||||| || |  | ||||| |||||||||||  |||||| |||||||  | || |||||||||||||| | |||||||||||||    
T  16242362 cctaaaattgctatgtttcggcaaaactagaattacagactcaaata--gaaaactttacaaaagtctcaaaatcataggcaatcgttctaatactcctt 16242265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 19909200 - 19909101
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    ||||||||| ||||||| ||| || |  | ||||| ||||| ||||||||||||||| |||||  |  |||||||||||| ||| | |||||||||||||    
T  19909200 cctaaaattgctatgttccgggaaaactacaattacagacttaaatatagaaaacataacaaaagtcccgaaatcatagggaatcgttctaatactcctt 19909101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 2166270 - 2166143
Alignment:
Q  76 aaatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataatta 173  Q
    |||||||||||||| |||| |||||| ||| |||||||||||||||||||||| |          ||||||||| ||||||||||| || |  | |||||    
T  2166270 aaatcttcggatgttcttgatttgccaatttgcatgatttcttcgtgaattacttcaaaaaaacccctaaaattgctatgtttcgggaaaactagaatta 2166171  T
Q  174 tagactcaaatatagaaaacattacaaa 201  Q
     | | |||||||||||||||||||||||    
T  2166170 caaattcaaatatagaaaacattacaaa 2166143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 27852752 - 27852674
Alignment:
Q  161 aagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactccttt 239  Q
    ||||| ||||||| | ||||||||||| ||||  |||||||| |  |||||||||| |||| ||||||| |||||||||    
T  27852752 aagaatataattacatactcaaatatataaaatgttacaaatgtcccgaaatcatatgcaactgctctattactccttt 27852674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 18747742 - 18747831
Alignment:
Q  149 ctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    ||||||||||| || |  | ||||| | |||||||||||||||||||||||||  |  |||||| ||||||||| | |||||||| ||||    
T  18747742 ctatgtttcgggaaaactagaattacatactcaaatatagaaaacattacaaaagtcccgaaatgataggcaatcgttctaatacccctt 18747831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 23054849 - 23054757
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgattg-catgatttcttcgtgaattacat 128  Q
    |||||||||||||| |||| ||||| ||| ||  |  ||||| ||||  ||||||||||||| ||||||  |||||||||||||||||||||||    
T  23054849 ctcttgaatcttcattcttgatcttcccagagt-cttcataagtctttagatgtcttgcttttccgatttacatgatttcttcgtgaattacat 23054757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 3002929 - 3002973
Alignment:
Q  85 gatgtcttgctttgccgatt-gcatgatttcttcgtgaattacat 128  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||    
T  3002929 gatgttttgctttgccgatttgcatgatttcttcttgaattacat 3002973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 8115519 - 8115467
Alignment:
Q  76 aaatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattac 126  Q
    |||| ||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  8115519 aaattttcggatgttcttgatttgccgatttgcatgatttcttcgtgaattac 8115467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 12771373 - 12771277
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||| ||||||||||  || |  | ||||| | |||||||||| ||||||||||||||  |||| |||||| ||| ||| | ||||||||||    
T  12771373 cctaaaattgctatgtttcgagaaaactagaattacaaactcaaatatcgaaaacattacaaaagtttcaaaatcacaggaaatcgttctaatactc 12771277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 13939015 - 13938919
Alignment:
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||| | |||||||||||| |  | || || |||| ||||||||| ||||||||||||  |  ||||||||| |||||| | ||||||||||||    
T  13939015 taaaattgcaatgtttcggaaaaactagaactacagacacaaatatagcaaacattacaaaagtcccgaaatcattggcaatcgttctaatactcct 13938919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 19170010 - 19170078
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| ||||||||||||| || |||||||||| ||   ||||||||||||||| |  |||||||||||    
T  19170010 aattacagactcaaatatataagacattacaaaattccggaaatcataggcaatcgtgctaatactcct 19170078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 19170270 - 19170214
Alignment:
Q  181 aaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||  |||| ||||| |||| ||||| | ||||||||||    
T  19170270 aaatatagaaaacattacaaaggtttccaaatcgtaggaaattgttttaatactcct 19170214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 20431436 - 20431496
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| ||||||||||||||||  |   ||||||||||||||| | ||||||||||||    
T  20431436 actcaaatttagaaaacattacaaaagtcctgaaatcataggcaatcgttctaatactcct 20431496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 17891554 - 17891755
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtc-ttgctttgccga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||| ||| |||| ||| ||||| ||||||||||||||||||||         
T  17891554 ctcttgaatcttcattcttcatcttcccaa-ggaccacataaatcttcggatgtctttgttttgtcgatttgcaggatttcttcgtgaattacat-caaa 17891651  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || | ||||| | |||||||| || |||||||  |||| | |||||||||||||||||||||||||| |  |||||||||||| |||| |||||||||    
T  17891652 agcaccttaaaactgctatgttttgggaagaacaggattacaaactcaaatatagaaaacattacaaatgtcccgaaatcataggaaattactctaatac 17891751  T
Q  234 tcct 237  Q
    ||||    
T  17891752 tcct 17891755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 38 - 239
Target Start/End: Original strand, 27420898 - 27421097
Alignment:
Q  38 cttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnnc 136  Q
    |||||||||||| |||||||||| |||| | |   || |||||||| ||||||||||||||||||| | ||||||||| ||||||||||||             
T  27420898 cttgaatcttcattcttcatcttcccaa-gaatttcacaaatcttcagatgtcttgctttgccgatatacatgatttcatcgtgaattacaacaaaat-- 27420994  T
Q  137 atcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    ||||||||||| ||||||||||| ||||| ||||||| | |||||||||||||||||||||||||| |  |||||||||| ||| ||| ||||||| |||    
T  27420995 atcctaaaattgctatgtttcgggaagaatataattacatactcaaatatagaaaacattacaaatgtcccgaaatcataagcagttgatctaatattcc 27421094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 237
Target Start/End: Original strand, 18553122 - 18553313
Alignment:
Q  37 tcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgattgcatgatttcttcgtgaattacatnnnnnnnc 136  Q
    ||||||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||       ||||||||||| ||||||||||       |    
T  18553122 tcttgaatcttcattcttcatcatcccaa-ggaccacataaatcttcggatgtcttgctttgc-------atgatttcttcatgaattacattaagaa-c 18553212  T
Q  137 atcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    | | ||||||| ||||||||  | ||||| | ||||| |||||||||||||||||||| | ||||| || |||||| ||||||||||| |||||||||||    
T  18553213 accataaaattgctatgttttaggaagaatagaattacagactcaaatatagaaaacaattcaaatgttccgaaatgataggcaattgatctaatactcc 18553312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 18971003 - 18970846
Alignment:
Q  79 tcttcggatgtcttgctttgccg-attgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattataga 177  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||       |  ||||||||| ||||||||| | ||||| | ||||| |||    
T  18971003 tcttctgatgtcttgctttgccggattgcatgatttcttcgtgaattacatcaaagtac--cctaaaattactatgtttcaggaagaataaaattacaga 18970906  T
Q  178 ctcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
     ||||| |||||||||||||||||| |  | ||||| || ||||||||||||||||||||    
T  18970905 ttcaaaaatagaaaacattacaaatgtcgcaaaatcgtaagcaattgctctaatactcct 18970846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 22627213 - 22627408
Alignment:
Q  39 ttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnnca 137  Q
    ||||||||||| |||||||||  || ||||||  || ||||||||  |||||||||||||||||| ||||||||||||||||||||||||        ||    
T  22627213 ttgaatcttcattcttcatct--cccaaggacttcacaaatcttcaaatgtcttgctttgccgatatgcatgatttcttcgtgaattaca--acaaaaca 22627308  T
Q  138 tcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||| |||||||   | ||||| | ||||| ||| ||||||| ||||||||||||||||    | ||||||||| ||||| |||||||||||||    
T  22627309 tcctaaaattgctatgttataggaagaatagaattacagaatcaaataaagaaaacattacaaatgcccctaaatcatagacaatttctctaatactcct 22627408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 18545095 - 18545296
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-gatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    ||||||||| |||| |||||||| |  ||| |||||||||||||||||||||||||||||||||| |||| || || ||||| | | |||||||          
T  18545095 ctcttgaatattcattcttcatcatctcaa-ggaccacataaatcttcggatgtcttgctttgcctgatttgcttgctttctgcattaattaca-ataag 18545192  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||| ||||| ||||||||||| ||||| | ||||| | |||||||||||||||||| | ||||| |  |||||||||||||||||| ||||||||    
T  18545193 aacaccctgaaattgctatgtttcgggaagaatagaattacaaactcaaatatagaaaacaattcaaatgtcccgaaatcataggcaattgatctaatac 18545292  T
Q  234 tcct 237  Q
    ||||    
T  18545293 tcct 18545296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 237
Target Start/End: Original strand, 28930156 - 28930298
Alignment:
Q  95 tttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaac 193  Q
    |||||||||| |||||||||||||||||||||| |       | || ||||||| ||||||||| |||| |  |||||||||||||||||||||||||||    
T  28930156 tttgccgatttgcatgatttcttcgtgaattacttcaaaacccctc-taaaattgctatgtttcagaaaaactataattatagactcaaatatagaaaac 28930254  T
Q  194 attacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||  |  |||||||||||||||||| ||||||| ||||    
T  28930255 attacaaaagtcccgaaatcataggcaattgttctaatattcct 28930298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 29717588 - 29717429
Alignment:
Q  77 aatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata 175  Q
    ||||||| ||||| |||||||||||||| |||| |||||||||||||||||||       | |  || |||| ||||||||||| |||||  |||||| |    
T  29717588 aatcttcagatgtattgctttgccgatttgcattatttcttcgtgaattacatcaaaaaacct--tagaattgctatgtttcgggaagaa--taattaca 29717493  T
Q  176 gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactccttt 239  Q
     |||||||||||||||||||||||||| |  |||||||||| ||||||| | ||||||||||||    
T  29717492 tactcaaatatagaaaacattacaaatatcccgaaatcataagcaattgatataatactccttt 29717429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 29850942 - 29851042
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    ||||||||| ||||||||||| ||||| | ||||| | ||||||| |||||||||||||||||| | || |||||||||| ||||| |||||||||||||    
T  29850942 cctaaaattgctatgtttcgggaagaatagaattacatactcaaagatagaaaacattacaaatgtctcaaaatcatagggaattgatctaatactcctt 29851041  T
Q  239 t 239  Q
    |    
T  29851042 t 29851042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 238
Target Start/End: Complemental strand, 23010317 - 23010115
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga--ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| | ||||| ||||| |||||| ||||||||||||| ||||||||||||||| |  |||| ||||||||| |||||||| ||         
T  23010317 ctcttgaatcttcatttttcat-tttcccaaggactacataaatcttcgcatgtcttgctttgcctaatttgcttgatttctttgtgaattatat-caat 23010220  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      |||  ||||||| ||||||||| | ||||| | ||||  |||||||||||||||||||| ||||||| |  | |||||  ||||| ||| ||||||||    
T  23010219 aacatattaaaattgctatgtttcaggaagaatagaattcaagactcaaatatagaaaacaatacaaatgtcccaaaatcggaggcagttgatctaatac 23010120  T
Q  234 tcctt 238  Q
    |||||    
T  23010119 tcctt 23010115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 25532101 - 25532260
Alignment:
Q  79 tcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatag 176  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||||| | |       || ||||||||| ||||||||||| || |  | ||||| ||    
T  25532101 tcttcggatgttcttgatttgccgatttgcatgatttcttcgtgaattgc-ttcaagaacaccctaaaattgctatgtttcgggaaaactagaattacag 25532199  T
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||| ||||||||||||||||||||| ||  |||||||||||||||| | ||||||||||||    
T  25532200 actgaaatatagaaaacattacaaaattcacgaaatcataggcaatcgttctaatactcct 25532260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 237
Target Start/End: Original strand, 25537432 - 25537580
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| |||||||||||||||||||||| |       |  ||||||||| ||||||||||| || |  | ||||| |||||||||||||    
T  25537432 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaacccc-cctaaaattgctatgtttcgggaaaactagaattacagactcaaatata 25537530  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||  |   ||||||||||||||| ||||||||||||||    
T  25537531 gaaaacattacaaaagtccagaaatcataggcaatcgctctaatactcct 25537580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 26651869 - 26651712
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||  |||||||||||||||||| ||||| |||||||| |||||||||        || | ||||||| |||| |||||  ||||| | |||||     
T  26651869 aaatcttcaaatgtcttgctttgccgatatgcataatttcttcatgaattaca--acaaaacaccttaaaattgctat-tttcgagaagaatagaattac 26651773  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    | ||| |||||||||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  26651772 atacttaaatatagaaaacattacaaatgtctcgaaatcataagcaattgctctaatactc 26651712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 18758228 - 18758325
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||| ||||||||||| || |  | ||||| |||||||||||||||||||||||||||  |  |||||||||||||||| | ||||||||||||    
T  18758228 ctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaaaagtcccgaaatcataggcaatcgttctaatactcct 18758325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 242
Target Start/End: Complemental strand, 34580007 - 34579841
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||       || ||||||||| |||||| | || |  || | |||||     
T  34580007 aatcttcggatgttcttgctttgccgatttgcatgatttcttcgtgaattacat-aaaaaacaccctaaaattgctatgtattgggactaatagaattac 34579909  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctttgct 242  Q
    | | | ||||||| |||| |||| |||| |  |||||||||||||||||| |||||||||||||||||    
T  34579908 ataatgaaatataaaaaaaattataaatatcccgaaatcataggcaattgttctaatactcctttgct 34579841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 242
Target Start/End: Complemental strand, 34585756 - 34585590
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||       || ||||||||| |||||| | || |  || | |||||     
T  34585756 aatcttcggatgttcttgctttgccgatttgcatgatttcttcgtgaattacat-aaaaaacaccctaaaattgctatgtattgggactaatagaattac 34585658  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctttgct 242  Q
    | | | ||||||| |||| |||| |||| |  |||||||||||||||||| |||||||||||||||||    
T  34585657 ataatgaaatataaaaaaaattataaatatcccgaaatcataggcaattgttctaatactcctttgct 34585590  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 11464488 - 11464386
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    ||||||||| ||||||||||| ||||| | || || | |||||||||||||||||||||||||| |  | ||||||||||| |||| ||||||||||||     
T  11464488 cctaaaattgctatgtttcgggaagaatagaactacatactcaaatatagaaaacattacaaatgtccctaaatcataggc-attgatctaatactcctc 11464390  T
Q  239 tgct 242  Q
    ||||    
T  11464389 tgct 11464386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 222
Target Start/End: Complemental strand, 32141622 - 32141479
Alignment:
Q  79 tcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattata-g 176  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||| |||       |||| || |||| ||||||||| | |||||   ||||| | |    
T  32141622 tcttcagatgtcttgttttgccgatttgcatgatttcttcgtgaatttcatcaaaa--catcttagaattgctatgtttcaggaagaattgaattacatg 32141525  T
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||    
T  32141524 actcaaatatagaaaacattacaaatgtctcgaaatcataagcaat 32141479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 16257828 - 16257881
Alignment:
Q  181 aaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  16257828 aaatatagaaaacattacaaatgtttcgaaatcatagacaatttctctaatact 16257881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 32086974 - 32087071
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcc 236  Q
    ||||||||| ||||||||||| ||||| | ||||| | || |||||||| |||||||||||||| |  | ||||||||| |||||| |||||||||||    
T  32086974 cctaaaattgctatgtttcgggaagaatagaattacaaacccaaatataaaaaacattacaaatgtcgcaaaatcatagacaattgatctaatactcc 32087071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 237
Target Start/End: Original strand, 17350854 - 17351002
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| ||||||||||||||||||||| ||       |  ||||||||| ||||||||||| || |  | |||||  ||||||||||||    
T  17350854 tcttgatttgccgatttgcatgatttcttcgtgaatta-attcaaaaaccccctaaaattgctatgtttcgggaaaactagaattacggactcaaatata 17350952  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||||  |   |||||||||| |||||| ||||||||||||    
T  17350953 gaaaacattacaaaagtcctgaaatcatagacaattgttctaatactcct 17351002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 25886362 - 25886266
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||| ||||||||||| || |  | ||||| |||||||||||||||||||||||||||  |  ||||||||||| |||| | ||||||||||    
T  25886362 cctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaaaagtcccgaaatcatagacaatcgttctaatactc 25886266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 29032705 - 29032768
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc 100  Q
    |||||||||||||| ||||||| ||||| || |||||||||||| ||||||||||||||||||||    
T  29032705 ctcttgaatcttcattcttcat-tttcccaatgaccacataaattttcggatgtcttgctttgcc 29032768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 19198749 - 19198662
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaatt 124  Q
    |||||||||||||||||||  |  |||| ||||||||| ||||||||| || || |||||||||||| |||||||||||||| |||||||    
T  19198749 ctcttgaatcttcaatctt--tgcttcccaaggaccacgtaaatcttcagacgtgttgctttgccgatttgcatgatttctttgtgaatt 19198662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 222
Target Start/End: Complemental strand, 27907743 - 27907610
Alignment:
Q  89 tcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatata 187  Q
    ||||| |||||||||| |||||||||||||||||||||| |        | ||||||||| ||||||||||| || |  | ||||| | |||||||||||    
T  27907743 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaaaa-accctaaaattgctatgtttcgggaaaactagaattacaaactcaaatata 27907645  T
Q  188 gaaaacattacaaatttttcgaaatcataggcaat 222  Q
    ||||||||||||||  |  ||||||||||||||||    
T  27907644 gaaaacattacaaaagtcccgaaatcataggcaat 27907610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 35680222 - 35680173
Alignment:
Q  188 gaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  35680222 gaaaacattccaaattttccgaaatcatagacaattgctctaatactcct 35680173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 29834793 - 29834885
Alignment:
Q  141 taaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
    ||||||| |||| |||||| ||||| | ||||| | |||||||||||||||||||||||||| |    ||||||||| |||||| ||||||||    
T  29834793 taaaattgctatctttcgggaagaataaaattacaaactcaaatatagaaaacattacaaatgtactaaaatcatagacaattgatctaatac 29834885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 24086440 - 24086379
Alignment:
Q  176 gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||||||| || |||||||||  | ||||||||||||||||| | ||||||||||||    
T  24086440 gactcaaatatagtaagcattacaaaagtctcgaaatcataggcaatcgttctaatactcct 24086379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 27540435 - 27540374
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaa 201  Q
    |||||||||||||||||||| || |  ||||||| |||| |||||||| |||||||||||||    
T  27540435 ctaaaatttctatgtttcgggaaaattataattacagacccaaatatacaaaacattacaaa 27540374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 28918144 - 28918212
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaa-atcataggcaattgctctaatactcct 237  Q
    ||||| ||||||| |||||||||||||||||||   |||||| |||||||||||||| ||||||||||||    
T  28918144 aattacagactcatatatagaaaacattacaaa-agttcgaatatcataggcaattgttctaatactcct 28918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 25196573 - 25196620
Alignment:
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaat 222  Q
    |||||||||||||||||||||||||||  |  ||||||||||||||||    
T  25196573 agactcaaatatagaaaacattacaaaagtcccgaaatcataggcaat 25196620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 18458519 - 18458473
Alignment:
Q  156 tcggaaagaacataattatagactcaaatatagaaaacattacaaat 202  Q
    |||||||||| | ||||||||||||||||||| |||| |||||||||    
T  18458519 tcggaaagaatagaattatagactcaaatataaaaaatattacaaat 18458473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 22568981 - 22569075
Alignment:
Q  140 ctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatact 234  Q
    |||||||| ||||||||||| || |  | ||||| | |||||||||||||||||||||||||  |  | |||||||||| ||| | |||||||||    
T  22568981 ctaaaattgctatgtttcgggaaaactagaattacaaactcaaatatagaaaacattacaaaagtaccaaaatcataggtaatcgttctaatact 22569075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 25922470 - 25922519
Alignment:
Q  79 tcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattac 126  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  25922470 tcttcggatgttcttgatttgccgatttgcatgatttcttcgtgaattac 25922519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 38796135 - 38796206
Alignment:
Q  169 aattatagactcaaatatagaaaa---cattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| ||||||||||||| ||||   |||||||||| || ||||||||||  |||||| ||||||||||||    
T  38796135 aattacagactcaaatataaaaaaaaacattacaaatgttccgaaatcataaacaattgatctaatactcct 38796206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 17199482 - 17199514
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaa 201  Q
    ||||| |||||||||||||||||||||||||||    
T  17199482 aattacagactcaaatatagaaaacattacaaa 17199514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45572540 - 45572444
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45572540 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45572444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45576207 - 45576111
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45576207 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45576111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45579874 - 45579778
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45579874 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45579778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45583541 - 45583445
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45583541 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45583445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45587208 - 45587112
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45587208 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45587112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45590875 - 45590779
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45590875 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45590779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45594542 - 45594446
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45594542 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45594446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45598209 - 45598113
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45598209 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45598113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45601876 - 45601780
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45601876 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45601780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45605543 - 45605447
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45605543 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45605447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45609210 - 45609114
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45609210 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45609114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45612877 - 45612781
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45612877 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45612781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 45616544 - 45616448
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| ||||||||  ||||||| | || || |  ||||||| || ||||||||| |||| |  | |||||||||||||||| |||||||    
T  45616544 catcctaaaattgctatgtttaagaaagaatagaactacatgctcaaatctaaaaaacattataaatgtccccaaatcataggcaattgttctaata 45616448  T

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Target: scaffold0024 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 41162 - 41363
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-gatt-gcatgatttcttcgtgaattacatnnnnn 133  Q
    ||||||||||| || |||||||||| |||| || |||||||||||||| |||||||| ||||||  |||| ||||||||||||||||||||||||         
T  41162 ctcttgaatctccattcttcatcttcccaa-ggtccacataaatcttcagatgtcttactttgcatgatttgcatgatttcttcgtgaattacatcaaga 41260  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || |||||||||   ||||||| | || || | ||||| ||||| |||||||||||||||||||||| ||  ||||||||||||||||| ||||||||    
T  41261 a-caccctaaaattgtaatgtttctggaataatagaattacagacttaaatatagaaaacattacaaatgttctgaaatcataggcaattgatctaatac 41359  T
Q  234 tcct 237  Q
    ||||    
T  41360 tcct 41363  T

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Target: scaffold0451 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 10365 - 10166
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgcc-ga-ttgcatgatttcttcgtgaattacatnnnnn 133  Q
    |||||||||||||| |||||||||| || | ||||||||||||||||| |||||||| ||||||| || |||| |||||||||||||||||||||         
T  10365 ctcttgaatcttcattcttcatcttcccga-ggaccacataaatcttcagatgtctttctttgcctgatttgcttgatttcttcgtgaattacat-caag 10268  T
Q  134 nncatcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatac 233  Q
      || ||||||||| |  |||||| | ||||| | ||||| | |||||||||||||||||| ||||||| ||  |||||||||| |||||| ||||||||    
T  10267 aacaccctaaaattgc--tgtttcaggaagaatagaattacaaactcaaatatagaaaacaatacaaatgttatgaaatcatagacaattgatctaatac 10170  T

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Target: scaffold0451; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 5686 - 5754
Alignment:
Q  169 aattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||| || ||||||||||||||||||||||||  |  | ||||||||| |||||| ||||||||||||    
T  5686 aattacagtctcaaatatagaaaacattacaaaagtcccaaaatcatagacaattgttctaatactcct 5754  T

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Target: scaffold0005 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 244064 - 243903
Alignment:
Q  77 aatcttcggatgt-cttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    ||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||       ||  |||||||| ||||||||||| ||||| | |||||     
T  244064 aatcttcggatgttcttgctttgacgatttgcatgatttctttgtgaattacatcaaaaa-cacactaaaattgctatgtttcgggaagaatagaattac 243966  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    | | |||||||||||||||||||||||| |   ||||| |||| |||||||||||||||||||    
T  243965 atattcaaatatagaaaacattacaaatatcatgaaataatagacaattgctctaatactcct 243903  T

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Target: scaffold1017 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 232
Target Start/End: Original strand, 522 - 618
Alignment:
Q  136 catcctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||||| | ||||||||| ||||| | |||||  |||||||||||||||||||||| |||| || |||||||||| ||||||| |||||||    
T  522 catcctaaaattgcaatgtttcgggaagaatagaattactgactcaaatatagaaaacattaaaaatgttccgaaatcataagcaattgttctaata 618  T

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Target: scaffold0072 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 38151 - 38315
Alignment:
Q  73 cataaatcttcggatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataat 171  Q
    ||||| |||||  |||||||| ||| |||||| || |||||||||||||||||||||       || |||||||||  |||||||||| || || | |||    
T  38151 cataagtcttcctatgtcttgtttttccgatttgcgtgatttcttcgtgaattacatcaaaa--caccctaaaattgttatgtttcgggaaaaagagaat 38248  T
Q  172 tata-gactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    || | ||||||||||||||||||||||||||| | | ||||||||| ||||||||||||||| ||||    
T  38249 tacatgactcaaatatagaaaacattacaaatgtcttgaaatcataagcaattgctctaatattcct 38315  T

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Target: scaffold0019 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 182682 - 182584
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||  | ||||||||||| |  | ||||| ||||||||||||||||||||||||||| ||  |||||||||||||||| | ||||||||||||    
T  182682 cctaaaattgttgtgtttcggaaaaactagaattacagactcaaatatagaaaacattacaaaattcccgaaatcataggcaatcgttctaatactcct 182584  T

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Target: scaffold0015 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 202102 - 202013
Alignment:
Q  39 ttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttgccga-ttgcatgatttcttcgtgaattacat 128  Q
    ||||||||||||||||  |||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||||||||| | ||||||||||    
T  202102 ttgaatcttcaatctttgtcttcccaa-ggaccacataaatcttcggatttcttgctttgtcgatttgcatgatttctccatgaattacat 202013  T

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Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 201972 - 201940
Alignment:
Q  170 attatagactcaaatatagaaaacattacaaat 202  Q
    |||| ||||||||||||||||||||||||||||    
T  201972 attacagactcaaatatagaaaacattacaaat 201940  T

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Target: scaffold0386 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 5041 - 4945
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||| || || || | |||||||||||| ||||||||||||| ||||||| || | |||||||  ||||||| ||||||||||||    
T  5041 cctaaaatttctatgttttgggaataatagaattatagactcgaatatagaaaacaatacaaatgttccaaaatcat--gcaattgatctaatactcct 4945  T

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Target: scaffold0386; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 13748 - 13655
Alignment:
Q  36 ctcttgaatcttcaatcttcatctttccaaaggaccacataaatcttcggatgtcttgctttg-ccga-ttgcatgatttcttcgtgaattacat 128  Q
    ||||||||| |||  ||||||||||  ||| |||||||||||||||||| ||||||||||||| | || |||| |||||||||||| ||||||||    
T  13748 ctcttgaattttccttcttcatcttctcaa-ggaccacataaatcttcgaatgtcttgctttgtctgatttgcttgatttcttcgtaaattacat 13655  T

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Target: scaffold0386; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 9360 - 9320
Alignment:
Q  60 ttccaaaggaccacataaatcttcggatgtcttgctttgcc 100  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  9360 ttcccaaggaacacataaatcttcggatgtcttgctttgcc 9320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 92999 - 92901
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    ||||||||| ||||||||||| || |  | ||||||||||||||||||||||||||||||||| ||   ||||  ||||||||| ||||||||| ||||    
T  92999 cctaaaattgctatgtttcgggaaaactagaattatagactcaaatatagaaaacattacaaaattcctgaaacgataggcaatggctctaatattcct 92901  T

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Target: scaffold0360 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 16700 - 16545
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    |||||||| |||||||||||||| |||| || |||||||||||||||||| ||        |||||| |||||  |||||||| | | ||| | |||||     
T  16700 aaatcttcagatgtcttgctttgtcgatatgtatgatttcttcgtgaatttca--acaaaacatccttaaattgttatgtttcaggaggaatagaattac 16603  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaata 232  Q
    |||||||||| ||||||| ||||||||| |  ||||||||||  |||||| |||||||    
T  16602 agactcaaatgtagaaaatattacaaatgtcccgaaatcataaacaattgatctaata 16545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 12094 - 12252
Alignment:
Q  76 aaatcttcggatgtcttgctttgccgat-tgcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattat 174  Q
    |||||||| |||||||| || | ||||| ||||||||||||||||||||||||        ||  || |||||||||| ||| || ||||| | |||||     
T  12094 aaatcttcagatgtctttctcttccgatatgcatgatttcttcgtgaattaca--acaaaacacgcttaaatttctatcttttgggaagaatagaattag 12191  T
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    ||||||||||||||||||||| || ||| |  | ||| |||| |||||||||| |||||||    
T  12192 agactcaaatatagaaaacatgactaatgtcccaaaaacataagcaattgctccaatactc 12252  T

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Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 237
Target Start/End: Original strand, 11965 - 12116
Alignment:
Q  85 gatgtcttgctttgccgatt-gcatgatttcttcgtgaattacatnnnnnnncatcctaaaatttctatgtttcggaaagaacataattatagactcaaa 183  Q
    ||||||||||||||| |||| | ||||||||||||| ||||| ||       || |||| |||| |||||||| || ||||| | ||||| |||||||||    
T  11965 gatgtcttgctttgctgatttgtatgatttcttcgtaaattaaatcaaaa--caccctagaattgctatgttttgggaagaatagaattacagactcaaa 12062  T
Q  184 tatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||| |||| |  |||||||||| | ||||  | ||||||||||    
T  12063 tatagaaaacattataaatgtcccgaaatcataaggaattaatataatactcct 12116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 12887 - 12859
Alignment:
Q  209 aaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||||||    
T  12887 aaatcataggcaattgctctaatactcct 12859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 4786 - 4848
Alignment:
Q  175 agactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||||||||||||||||||||||||||  |   ||||||||||||||| | ||||||||||||    
T  4786 agactcaaatatagaaaacattacaaaagtgctgaaatcataggcaatcgttctaatactcct 4848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 22967 - 23060
Alignment:
Q  144 aatttctatgtttcggaaagaacataattatagactcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcct 237  Q
    |||| ||||||||||| || |  | ||||| ||||||||||||||||||||||| |||  |  ||||| |||||||||| | ||||||||||||    
T  22967 aattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattaaaaaagtcccgaaaccataggcaatcgttctaatactcct 23060  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 192086 - 192147
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactcctt 238  Q
    |||||||||||||||||||||||||  |  |||||||||| ||||| ||||||| |||||||    
T  192086 actcaaatatagaaaacattacaaaagtcccgaaatcataagcaatcgctctaacactcctt 192147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 36302 - 36247
Alignment:
Q  139 cctaaaatttctatgtttcggaaagaacataattatagactcaaatatagaaaaca 194  Q
    |||||||||||| |||||||| ||||| | ||||| | ||||||||||||||||||    
T  36302 cctaaaatttctctgtttcgggaagaatagaattacatactcaaatatagaaaaca 36247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 21404 - 21462
Alignment:
Q  177 actcaaatatagaaaacattacaaatttttcgaaatcataggcaattgctctaatactc 235  Q
    |||||||||||||||||||||||||  |  |||||||||| ||||||| |||| |||||    
T  21404 actcaaatatagaaaacattacaaaagtcccgaaatcataagcaattgttctactactc 21462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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