View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1290-Insertion-2 (Length: 403)
Name: NF1290-Insertion-2
Description: NF1290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1290-Insertion-2 |
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Alignment Details
Target: chr7 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 8 - 402
Target Start/End: Complemental strand, 48493131 - 48492737
Alignment:
| Q |
8 |
aaaaccatgtgtgttcagatattggcattcttcttgagaccaaatagggattccaagtttcgcaaaatgtggaatttgtaccacagttggtttggaagga |
107 |
Q |
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| T |
48493131 |
aaaaccatgtgtgttcagatattggcattcttcttgagaccaaatagggattccaagtttcgcaaaatgtggaatttgtaccacagttggtttggaagga |
48493032 |
T |
|
| Q |
108 |
tggcactattctttgcagccttgaacatagtattgggaatgcaagctgcaggagcaacgaatgcttggaagacaagctatggattccttgctggtattat |
207 |
Q |
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| T |
48493031 |
tggcactattctttgcagccttgaacatagtattgggaatgcaagctgcaggagcaacgaatgcttggaagacaagctatggattccttgctggtattat |
48492932 |
T |
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| Q |
208 |
aattgttgtagttatcgttctcgaaatattggcatatttaaaaaggtcagagaaacgttctcttcctccaaatttccaaatggaccctcttggagaagaa |
307 |
Q |
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| T |
48492931 |
aattgttgtagttatcgttctcgaaatattggcatatttaaaaaggtcagagaaacgttctcttcctccaaatttccaaatggaccctcttggagaagaa |
48492832 |
T |
|
| Q |
308 |
atctttccaagaaataatcaaacaaaaggtacattctttcctttgctttatacaactttctttgtttaagttgttttgtgtaacattgtatctaa |
402 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48492831 |
atctttccaagaaataatcaaacaaaaggtacattctttcctttgctttatacaactttctttgtttaagttgttttgtgtaacattgtatctaa |
48492737 |
T |
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