View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12901_high_2 (Length: 283)
Name: NF12901_high_2
Description: NF12901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12901_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 42665056 - 42665331
Alignment:
| Q |
1 |
tttggtactatttttcaattgtattggttagtttgactttactgtaaaataattgttttttatgttgaccattatttttaattaaatacaaaacttgtta |
100 |
Q |
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| T |
42665056 |
tttggtactatttttcaattgtattggttagtttgactttattgtaaaataattgttttttatgttgaccattatttttaattaaatacaatacttgtta |
42665155 |
T |
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| Q |
101 |
atggattgtaactttgagctgaattaaaatgagtgggtattaattatgttgttatgatgttttttacaatgtatttatattggccaacaattgaatttaa |
200 |
Q |
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| T |
42665156 |
atggattgtaactttgagctgaattaaaatgagagggtattaattatgttgttatgatgttttttacaatgtatttatattggccaacaattgaatttaa |
42665255 |
T |
|
| Q |
201 |
ttacttgctaaaagtgggaaagctatatttttgaaaggaaaaaagtggttgttgcagttatgaatatgatgatgtc |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
42665256 |
ttacttgctaaaagtgggaaagctatatttttgaaaggaaaaaagtggttgttgcatttatgaatatgatgatgtc |
42665331 |
T |
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