View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12902_low_14 (Length: 279)
Name: NF12902_low_14
Description: NF12902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12902_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 11759830 - 11759576
Alignment:
| Q |
1 |
tatagatagcataaaataaaaatggtagcaataaaaattatttgctcattcctttatgatagttttgtctcttaattaaaataaggatgagaagaagaca |
100 |
Q |
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| T |
11759830 |
tatagatagcataaaataaaaatggtagcaataaaaattatttgctcattcctttatgatagttttgtctcttaattaaaataaggatgagaagaagaca |
11759731 |
T |
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| Q |
101 |
atcatgtaatgtaacaataaaacaaccaaattaaatttcaaaatttatttttatgggcgtgtaaaaaagtttaacagtatcgctatatacaaattaaatt |
200 |
Q |
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| T |
11759730 |
atcatgtaatgtaacaataaaacaaccaaattaaattttaaaatttatttttatgcgcgtgtaaaaaagttttacagtatcgttatatacaaattaaatt |
11759631 |
T |
|
| Q |
201 |
cttaaatttttagatcattgttgtataagttgttttgctagcctatggttacagg |
255 |
Q |
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| T |
11759630 |
cttaaatttttagatcattgttgtataagttgttttgctagcctatggttacagg |
11759576 |
T |
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