View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12903_low_12 (Length: 225)
Name: NF12903_low_12
Description: NF12903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12903_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 408509 - 408302
Alignment:
| Q |
1 |
caccaaaggctcaaagcaaacactacaacacctaacaactccttccaggagcaaacattaaacataacaaggagctatccgtaaaatgctttccagaaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
408509 |
caccaaaggctcaaagcaaacactacaacacctaacaactccttccaggagcaaacattaaacataacaaggagctatccgtaaaatgctttccagaaac |
408410 |
T |
|
| Q |
101 |
catttatatggagactatagaaataagattcataataataattacaatcaatgaaaccctccacttcttctatcataaattaaaaccttcatttcttatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
408409 |
catttatatggagactatagaaataagattcataataataattacaatcaatgaaaccctccacttcttctatcataaattaaaaccttcatttcttatt |
408310 |
T |
|
| Q |
201 |
gctcttcc |
208 |
Q |
| |
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|||||||| |
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|
| T |
408309 |
gctcttcc |
408302 |
T |
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