View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12904_high_11 (Length: 291)
Name: NF12904_high_11
Description: NF12904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12904_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 32817613 - 32817337
Alignment:
| Q |
1 |
aattgaagtgtgatgaggaaagtaaaagatgcacacaccaaaaactgtaagaaaaagtccaagaattaaaggatacagaatctaatgttccactaagcat |
100 |
Q |
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| T |
32817613 |
aattgaagtgtgatgaggaaagtaaaagatgcacacaccaaaaactgtaagaaaaagtccaagaattaaaggatacagaatctaatgttccactaagcat |
32817514 |
T |
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| Q |
101 |
gcatggtggatcccacatcatctctccaccttaaggaatccaagtgactgacccataccaaagatcttgttgttgctatgtgcacctggcttcatttttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
32817513 |
gcatggtggatcccacatcatctctccaccttaaggaatccaagtgactgacccataccaaagatcttgttgttgctatgtgcacctggcttcattttcg |
32817414 |
T |
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| Q |
201 |
ggataaagaagattccaatggtatctattgaaatcccaagaatatggggtcaatgtgacatggaaaaagttattact |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32817413 |
ggataaagaagattccaatggtatctattgaaatcccaagaatatggggtcaatgtgacatggaaaaagttattact |
32817337 |
T |
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