View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12904_low_15 (Length: 255)
Name: NF12904_low_15
Description: NF12904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12904_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 7 - 240
Target Start/End: Original strand, 18865661 - 18865894
Alignment:
| Q |
7 |
gcagcacagaccaaatattatcaaggtgaaagtgaattcagatagtgattataacagcggcaacaagttcagaagacttaacgtgcctcttacgctaaag |
106 |
Q |
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|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18865661 |
gcagcatagaccaaatattatcaagatgaaagtgaattcagatagtgattataacagcggcaacaagttcagaagacttaacgtgcctcttacgctaaag |
18865760 |
T |
|
| Q |
107 |
tctagggttgggaagtttctgagcggtgtgatgcaggacgtgatgcgggagcaggacaagcctcaaaagttctaccgtgctatcacggaggagttgaagc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18865761 |
tctagggttgggaagtttctgagcggtgtgatgcaggacgtgatgcgggagcaggacaagcctcaaaagttctaccgtgctatcacggaggagttgaagc |
18865860 |
T |
|
| Q |
207 |
tcttgaaggattgtagagattctgctcttaaaca |
240 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
18865861 |
tcttgaaggattgtagagattctgctcttaaaca |
18865894 |
T |
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