View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12905_low_3 (Length: 505)

Name: NF12905_low_3
Description: NF12905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12905_low_3
NF12905_low_3
[»] chr6 (22 HSPs)
chr6 (1-487)||(5691047-5691534)
chr6 (1-131)||(5148252-5148382)
chr6 (2-145)||(5104151-5104294)
chr6 (3-145)||(5355895-5356037)
chr6 (1-142)||(5395622-5395763)
chr6 (2-145)||(5369040-5369183)
chr6 (25-145)||(5261425-5261545)
chr6 (2-145)||(5075010-5075153)
chr6 (2-145)||(5094621-5094764)
chr6 (21-145)||(5285424-5285548)
chr6 (2-145)||(5158780-5158923)
chr6 (2-145)||(5424333-5424476)
chr6 (1-142)||(5183234-5183375)
chr6 (21-145)||(5445676-5445800)
chr6 (1-139)||(5133190-5133328)
chr6 (3-145)||(5342275-5342417)
chr6 (2-145)||(5348955-5349100)
chr6 (32-145)||(5068353-5068466)
chr6 (36-145)||(5382262-5382371)
chr6 (35-131)||(5277306-5277402)
chr6 (35-131)||(5175479-5175575)
chr6 (84-131)||(5432069-5432116)
[»] chr7 (1 HSPs)
chr7 (1-145)||(36215171-36215315)
[»] chr4 (23 HSPs)
chr4 (2-145)||(4358990-4359133)
chr4 (32-145)||(4125719-4125832)
chr4 (1-115)||(25568573-25568688)
chr4 (27-145)||(4322381-4322499)
chr4 (1-127)||(4135079-4135205)
chr4 (32-145)||(4334162-4334275)
chr4 (39-147)||(4343558-4343666)
chr4 (32-145)||(4351839-4351952)
chr4 (33-130)||(6547184-6547281)
chr4 (33-124)||(6623716-6623807)
chr4 (33-124)||(6499634-6499725)
chr4 (33-122)||(6649644-6649733)
chr4 (33-130)||(6674594-6674691)
chr4 (35-130)||(6751438-6751533)
chr4 (33-130)||(6814363-6814460)
chr4 (54-130)||(6834778-6834854)
chr4 (45-124)||(6534939-6535018)
chr4 (48-130)||(6589318-6589400)
chr4 (33-130)||(6757054-6757151)
chr4 (82-124)||(6714449-6714491)
chr4 (35-124)||(6726524-6726613)
chr4 (33-130)||(6771795-6771892)
chr4 (62-130)||(6795062-6795130)
[»] chr2 (1 HSPs)
chr2 (25-145)||(22585600-22585720)
[»] chr5 (1 HSPs)
chr5 (1-145)||(8876382-8876526)
[»] scaffold0286 (1 HSPs)
scaffold0286 (33-124)||(5295-5386)
[»] scaffold0294 (1 HSPs)
scaffold0294 (36-145)||(9947-10056)
[»] scaffold0373 (1 HSPs)
scaffold0373 (62-130)||(11171-11239)


Alignment Details
Target: chr6 (Bit Score: 459; Significance: 0; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 1 - 487
Target Start/End: Complemental strand, 5691534 - 5691047
Alignment:
Q  1 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5691534 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca 5691435  T
Q  101 tgatttgttgcgagatatgggaagagaaatcgttcgtgagaaatcgcnnnnnnntattgatgagtgtagcaggttgtggtctagtaagaatgtgcttcat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  5691434 tgatttgttgcgagatatgggaagagaaatcgttcgtgagaaatcgcaaaaaaatattgatgagtgtagcaggttgtggtctagtaagaatgtgcttcat 5691335  T
Q  201 gtattatcaaaacgaacggtaggcacttcatattcatttttctttctattttggacttacagaatctaaggcttaagga-gtgaaacaatcatttatgtg 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5691334 gtattatcaaaacgaacggtaggcacttcatattcatttttctttctattttggacttacagaatctaaggcttaaggaagtgaaacaatcatttatgtg 5691235  T
Q  300 taaatttttgacactctttaattttggtgactatcacaagaacatacaaaattagttttgttgtgattacaaaatttgtttaatcgtgaatcatttttat 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5691234 taaatttttgacactctttaattttggtgactatcacaagaacatacaaaattagttttgttgtgattacaaaatttgtttaatcgtgaatcatttttat 5691135  T
Q  400 atgatttcaaaattggtttgattgtgaataatttttcatagggaacaaaagttgagggactgagtttgaagttgccaagagctaatgt 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5691134 atgatttcaaaattggtttgattgtgaataatttttcatagggaacaaaagttgagggactgagtttgaagttgccaagagctaatgt 5691047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 5148382 - 5148252
Alignment:
Q  1 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca 100  Q
    |||||||| |||| ||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||| |||  ||||| |||||||    
T  5148382 atatattaaatggctgtgaactttatgcagaaattggaataaatgtcctactggagcgaagccttgtgactgttgatgatatgaatcggcttggaatgca 5148283  T
Q  101 tgatttgttgcgagatatgggaagagaaatc 131  Q
    ||||||||||||||| |||| ||||||||||    
T  5148282 tgatttgttgcgagacatggcaagagaaatc 5148252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 5104294 - 5104151
Alignment:
Q  2 tatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcat 101  Q
    |||||||||||| ||||  |||| ||||| ||||||||||| | ||||||| |||||||| ||| | ||||||||||||| |||||  ||| ||||||||    
T  5104294 tatattagatggatgtggactttttgcagaaattggaataagtatccttgttgagcgaagtcttataactgttgatgataagaacaaacttggaatgcat 5104195  T
Q  102 gatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  5104194 gatttgttgcgagatatgggaagagaaatcattcgtgagaaatc 5104151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 5356037 - 5355895
Alignment:
Q  3 atattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatg 102  Q
    |||||| |||| ||||  |||||||| | ||||||||||| | | ||||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  5356037 atattaaatggatgtggactttatgctgaaattggaataagtattcttgttgagcgaagccttgtaactgttgatgataagaataggcttagaatgcatg 5355938  T
Q  103 atttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    ||||| | |||||||||||||||||| ||||||||||||||||    
T  5355937 atttgctacgagatatgggaagagaagtcgttcgtgagaaatc 5355895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 5395622 - 5395763
Alignment:
Q  1 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca 100  Q
    |||||||| ||||| | || |||| ||||| ||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||| |||  ||||||    
T  5395622 atatattaaatggtagcgaactttttgcagaaattggagtaagtgtccttgttgagcgaagccttgtaactgttgatgataggaacagacttgcaatgca 5395721  T
Q  101 tgatttgttgcgagatatgggaagagaaatcgttcgtgagaa 142  Q
    ||||||| |  |||||||||||||||||||||||||||||||    
T  5395722 tgatttgctaagagatatgggaagagaaatcgttcgtgagaa 5395763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 5369040 - 5369183
Alignment:
Q  2 tatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcat 101  Q
    |||||||||||| ||||  |||| ||| | ||||||||||| | ||||||| |||||||| ||||| ||||||||||||| |||||  ||| ||||||||    
T  5369040 tatattagatggatgtggactttttgctgaaattggaataagtatccttgttgagcgaagtcttgtcactgttgatgataagaacaaacttggaatgcat 5369139  T
Q  102 gatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    |||||||||||||||||||||||||||||| |||||| ||||||    
T  5369140 gatttgttgcgagatatgggaagagaaatcattcgtgggaaatc 5369183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 5261545 - 5261425
Alignment:
Q  25 atgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaag 124  Q
    |||||| |||||||||||  |||||||| ||| |||||||||||| ||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||    
T  5261545 atgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaag 5261446  T
Q  125 agaaatcgttcgtgagaaatc 145  Q
    |||||| ||||||||| ||||    
T  5261445 agaaattgttcgtgaggaatc 5261425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 5075153 - 5075010
Alignment:
Q  2 tatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcat 101  Q
    ||||||| |||| ||||| |||| ||| | ||||||| ||| ||| ||||| |||||||||||||| ||||| ||||||||||||| |||| ||||||||    
T  5075153 tatattaaatggatgtgaactttttgctgaaattggagtaagtgtacttgttgagcgaagccttgtaactgtcgatgataggaacaagcttggaatgcat 5075054  T
Q  102 gatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    |||||| |||| |||||||||||||||||| ||||||| |||||    
T  5075053 gatttgctgcgtgatatgggaagagaaatcattcgtgaaaaatc 5075010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 5094621 - 5094764
Alignment:
Q  2 tatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcat 101  Q
    ||||||| |||| ||||  |||| ||| | ||||||||||| | ||||||| ||||| || ||||| ||||||||||||| |||||  ||| ||||||||    
T  5094621 tatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcgtagtcttgtaactgttgatgataagaacaaacttggaatgcat 5094720  T
Q  102 gatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  5094721 gatttgttgcgagatatgggaagagaaatcattcgtgagaaatc 5094764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 5285548 - 5285424
Alignment:
Q  21 ctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgg 120  Q
    |||||||||| |||||||||||  |||||||| ||| |||||||||||| ||||||||||| ||||| |||| ||||||||| |||| ||||||||||||    
T  5285548 ctttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgg 5285449  T
Q  121 gaagagaaatcgttcgtgagaaatc 145  Q
    |||||| ||| ||||||||| ||||    
T  5285448 gaagaggaattgttcgtgaggaatc 5285424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 5158923 - 5158780
Alignment:
Q  2 tatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcat 101  Q
    ||||||| |||| ||||| |||| ||  | |||||||||||   ||||||| ||||| || ||||| |||||||||| || |||||  ||| ||||||||    
T  5158923 tatattaaatggatgtgaactttttggtgaaattggaataagcatccttgttgagcgtagtcttgttactgttgatggtaagaacaaacttggaatgcat 5158824  T
Q  102 gatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  5158823 gatttgttgcgagatatgggaagagaaatcattcgtgagaaatc 5158780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 5424333 - 5424476
Alignment:
Q  2 tatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcat 101  Q
    ||||||| |||| ||||  |||| ||| | ||||||||||| | ||||||| ||||| || ||||| |||||||||||||  ||||  ||| ||||||||    
T  5424333 tatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcggagtcttgtcactgttgatgataataacaaacttggaatgcat 5424432  T
Q  102 gatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    |||||||||||||||||||||||||||||| |||||| ||||||    
T  5424433 gatttgttgcgagatatgggaagagaaatcattcgtgggaaatc 5424476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5183375 - 5183234
Alignment:
Q  1 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca 100  Q
    |||||||| ||||| | ||  ||| ||||| ||||||| ||| ||||||||| ||| |||||||||| |||||||||||||||||||  ||   ||||||    
T  5183375 atatattaaatggtagcgaattttttgcagaaattggagtaagtgtccttgttgagagaagccttgtaactgttgatgataggaacaaactgcaaatgca 5183276  T
Q  101 tgatttgttgcgagatatgggaagagaaatcgttcgtgagaa 142  Q
    ||||||| |  |||||||||||||||||||||||||||||||    
T  5183275 tgatttgctaagagatatgggaagagaaatcgttcgtgagaa 5183234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 5445676 - 5445800
Alignment:
Q  21 ctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgg 120  Q
    |||| ||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||||| ||||| |||| ||||||||| |  | ||||||||||||    
T  5445676 ctttctgcagaaattggaataagtgtccttgttgctcgaagccttgtgactgttgatgataagaacatgcttggaatgcatggtcagctgcgagatatgg 5445775  T
Q  121 gaagagaaatcgttcgtgagaaatc 145  Q
    |||||| ||||||| ||||| ||||    
T  5445776 gaagaggaatcgtttgtgaggaatc 5445800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 5133328 - 5133190
Alignment:
Q  1 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca 100  Q
    |||||||| |||||||||  |||| ||| | ||||||||||| | | ||| | ||| |||||||||| |||||||||| || | |||||||| |||||||    
T  5133328 atatattaaatggttgtggactttttgccgaaattggaataagtattcttattgagagaagccttgtaactgttgatgctaaggacaggcttggaatgca 5133229  T
Q  101 tgatttgttgcgagatatgggaagagaaatcgttcgtga 139  Q
    |||||||||| |||||||||||||||||||  |||||||    
T  5133228 tgatttgttgagagatatgggaagagaaattattcgtga 5133190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 5342275 - 5342417
Alignment:
Q  3 atattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatg 102  Q
    |||||| |||| ||||  |||| ||||| ||||||||||| ||| ||||| |||||||||||||| | ||||||    | |||||  ||| ||||||| |    
T  5342275 atattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagccttgtaattgttgacagcaagaacaaacttggaatgcacg 5342374  T
Q  103 atttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  5342375 atttgctgcgagatatgggaagagaaatcgttcgtgagaaatc 5342417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 5348955 - 5349100
Alignment:
Q  2 tatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcat 101  Q
    ||||||| |||| ||||| |||| ||| | ||||||||||| | || |||| || ||||| ||||| ||||||||||||| |||||  ||| ||||||||    
T  5348955 tatattaaatggatgtgaactttttgctgaaattggaataagtatctttgttgatcgaagtcttgtcactgttgatgataagaacaaacttggaatgcat 5349054  T
Q  102 --gatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
      |||||||||||||||||||||||||||||| |||||| ||||||    
T  5349055 atgatttgttgcgagatatgggaagagaaatcattcgtgggaaatc 5349100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 5068466 - 5068353
Alignment:
Q  32 aattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatc 131  Q
    ||||||||||| | ||||||| |||||||| || || | ||||||| | | |||||  ||| ||||||||||||||||||||||||||||||||||||||    
T  5068466 aattggaataagtatccttgttgagcgaagtctggttattgttgataaaaagaacaaacttggaatgcatgatttgttgcgagatatgggaagagaaatc 5068367  T
Q  132 gttcgtgagaaatc 145  Q
    ||||||| ||||||    
T  5068366 gttcgtgggaaatc 5068353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 5382262 - 5382371
Alignment:
Q  36 ggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatcgttc 135  Q
    ||||||| ||||||||| ||| |||||||||| ||||| ||||||| ||| |  ||| ||||||||||||||||  | |||||||||||||||||| |||    
T  5382262 ggaataagtgtccttgttgagagaagccttgtaactgtcgatgataagaatacacttggaatgcatgatttgttaagggatatgggaagagaaatcattc 5382361  T
Q  136 gtgagaaatc 145  Q
    |||| |||||    
T  5382362 gtgaaaaatc 5382371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 5277306 - 5277402
Alignment:
Q  35 tggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatc 131  Q
    |||||||| ||||||||| ||||||||| | || || |||||| |||  |||| |||| |||||||| |||||||||| ||||||||||||||||||    
T  5277306 tggaataagtgtccttgttgagcgaagcttagtaacggttgataataaaaacaagcttggaatgcataatttgttgcgggatatgggaagagaaatc 5277402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 5175479 - 5175575
Alignment:
Q  35 tggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatc 131  Q
    |||||||| |||||| || ||||||||| | || || |||||| |||  |||| |||| |||||||| |||||||||| ||||||||||||||||||    
T  5175479 tggaataagtgtcctggttgagcgaagcttagtaacggttgataataaaaacaagcttggaatgcataatttgttgcgggatatgggaagagaaatc 5175575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 5432069 - 5432116
Alignment:
Q  84 aacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatc 131  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  5432069 aacaagcttggaatgcatgatttgttgcgggatatgggaagagaaatc 5432116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 36215315 - 36215171
Alignment:
Q  1 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca 100  Q
    |||||||| ||||  |||| |||| ||||| ||||||| ||| ||| ||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  36215315 atatattaaatggaagtgaactttttgcagaaattggagtaagtgttcttgtagagcgaagccttgtaactgttgatgataggaacaggcttggaatgca 36215216  T
Q  101 tgatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||    
T  36215215 tgatttgctgcgagatatgggaagagagatcattcgtgagaaatc 36215171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 6e-35; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 4358990 - 4359133
Alignment:
Q  2 tatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcat 101  Q
    |||||||||||| ||||   ||| ||||||||||||||||| ||||||||| ||| |||||||||| || |||||||||| ||||| |||| | ||||||    
T  4358990 tatattagatggctgtggattttttgcaggaattggaataagtgtccttgttgagagaagccttgtaacggttgatgataagaacaagcttggcatgcat 4359089  T
Q  102 gatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    |||||| | ||||||||||||||||||||| |||||||||||||    
T  4359090 gatttgctccgagatatgggaagagaaatcattcgtgagaaatc 4359133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 4125832 - 4125719
Alignment:
Q  32 aattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatc 131  Q
    ||||||||||| ||||||||| || ||||||||||| || |||||||||| ||||| |||| | |||||||||||| |||||||||||||||||||||||    
T  4125832 aattggaataagtgtccttgttgaacgaagccttgtaacagttgatgataagaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatc 4125733  T
Q  132 gttcgtgagaaatc 145  Q
     |||||||||||||    
T  4125732 attcgtgagaaatc 4125719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25568573 - 25568688
Alignment:
Q  1 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatg-ataggaacaggcttagaatgc 99  Q
    |||||||  |||||||||| |||||||||| |||||||||||| |||||||| |||||||||||||||||| |||||| || ||||||| ||| ||||||    
T  25568573 atatattgaatggttgtgaactttatgcagaaattggaataaacgtccttgttgagcgaagccttgtgactattgatgaattggaacagacttggaatgc 25568672  T
Q  100 atgatttgttgcgaga 115  Q
    ||||||||||||||||    
T  25568673 atgatttgttgcgaga 25568688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 4322499 - 4322381
Alignment:
Q  27 gcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagag 126  Q
    |||| ||||||||||| ||||||||| ||| |||||||||| || |||||||||| ||||| |||| | |||||||||||| |||||||||||||||| |    
T  4322499 gcagaaattggaataagtgtccttgttgagagaagccttgtaacggttgatgataagaacaagcttggcatgcatgatttgctgcgagatatgggaaggg 4322400  T
Q  127 aaatcgttcgtgagaaatc 145  Q
    ||||| |||||||||||||    
T  4322399 aaatcattcgtgagaaatc 4322381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4135205 - 4135079
Alignment:
Q  1 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca 100  Q
    |||||||| ||||||||| ||||| ||| | ||| ||||||| ||||||||| |||||||||||||| ||| |||||||||  |||| |||| |||||||    
T  4135205 atatattaaatggttgtggtctttttgctgaaatcggaataagtgtccttgttgagcgaagccttgtaactattgatgataaaaacaagcttggaatgca 4135106  T
Q  101 tgatttgttgcgagatatgggaagaga 127  Q
    ||||||| | |||||||||||||||||    
T  4135105 tgatttgctacgagatatgggaagaga 4135079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 4334162 - 4334275
Alignment:
Q  32 aattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatc 131  Q
    ||||||||||| ||||||||| |||||||||||||| || || |||| || ||||| |||| | |||||||||||| | |||||||||||||||||||||    
T  4334162 aattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgcttcgagatatgggaagagaaatc 4334261  T
Q  132 gttcgtgagaaatc 145  Q
     |||||||||||||    
T  4334262 attcgtgagaaatc 4334275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 4343558 - 4343666
Alignment:
Q  39 ataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatcgttcgtg 138  Q
    |||| ||||||||| ||| |||||||||| |  |||||||||| ||||| |||| | |||||||||||| ||||||||||||||||||||||| ||||||    
T  4343558 ataagtgtccttgttgagagaagccttgtaatggttgatgataagaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtg 4343657  T
Q  139 agaaatcgc 147  Q
    |||||||||    
T  4343658 agaaatcgc 4343666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 4351839 - 4351952
Alignment:
Q  32 aattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatc 131  Q
    |||||||||||| || ||||| ||| |||||||||| |  ||||||||||  |||| |||| | |||||||||||| |||||||||||||||||||||||    
T  4351839 aattggaataaaggttcttgttgagagaagccttgtaatcgttgatgataaaaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatc 4351938  T
Q  132 gttcgtgagaaatc 145  Q
     |||||||||||||    
T  4351939 attcgtgagaaatc 4351952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 6547281 - 6547184
Alignment:
Q  33 attggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    |||||||| || |||||||| |||||||||||||| ||||||||  ||||||||| |||||||||||||||||||||| |||| ||||||||| ||||    
T  6547281 attggaattaaagtccttgtagagcgaagccttgtaactgttgacaataggaacaagcttagaatgcatgatttgttgagagacatgggaagacaaat 6547184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 6623807 - 6623716
Alignment:
Q  33 attggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaag 124  Q
    |||||||| || |||||||| |||||||||||||| ||||||||  ||||||||| ||||||||||||||| |||||| |||||||||||||    
T  6623807 attggaattaaagtccttgtagagcgaagccttgtaactgttgacaataggaacaagcttagaatgcatgacttgttgagagatatgggaag 6623716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 6499725 - 6499634
Alignment:
Q  33 attggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaag 124  Q
    |||||||| || |||||||| |||||||||||| | | | ||||  ||||||||| |||||||||||||||||||||| |||||||||||||    
T  6499725 attggaattaaagtccttgtagagcgaagccttttaattattgacaataggaacaagcttagaatgcatgatttgttgagagatatgggaag 6499634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 6649644 - 6649733
Alignment:
Q  33 attggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatggga 122  Q
    |||||||| || |||||||| ||| |||||||||| ||||||||  ||||||||| |||||||||||||||||||||  |||| ||||||    
T  6649644 attggaattaaagtccttgtagagagaagccttgtaactgttgacaataggaacaagcttagaatgcatgatttgttaagagacatggga 6649733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 6674594 - 6674691
Alignment:
Q  33 attggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    |||||||| || |||||| | |||||||||||| | ||||||||  ||||||||| |||||||||||||||||| ||| |||| ||||||||| ||||    
T  6674594 attggaattaaagtccttttagagcgaagccttctaactgttgacaataggaacaagcttagaatgcatgatttattgagagacatgggaagacaaat 6674691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 6751438 - 6751533
Alignment:
Q  35 tggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    |||||| || |||||| | |||||||| ||||| ||||||||  || |||||| |||||||||||||||||||||| |||| ||||||||| ||||    
T  6751438 tggaatgaaagtccttttagagcgaagtcttgtaactgttgacaatgggaacaagcttagaatgcatgatttgttgagagacatgggaagacaaat 6751533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 6814363 - 6814460
Alignment:
Q  33 attggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    |||||||| || |||||||| ||||||  |||||| ||||||||  ||||||||| ||||||||||||||||||||   |||| ||||||||| ||||    
T  6814363 attggaattaaagtccttgttgagcgagcccttgtaactgttgacaataggaacaagcttagaatgcatgatttgtgaagagacatgggaagacaaat 6814460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 6834778 - 6834854
Alignment:
Q  54 gagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    |||||||||||||| ||||||||  || |||||| ||||||| |||||||||||||| |||| ||||||||| ||||    
T  6834778 gagcgaagccttgtaactgttgacaatgggaacaagcttagagtgcatgatttgttgagagacatgggaagacaaat 6834854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 6535018 - 6534939
Alignment:
Q  45 gtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaag 124  Q
    ||||| || |||||||||||||| ||||||||  |||| ||||  ||||||||||||||||||||| |||| ||||||||    
T  6535018 gtcctggtagagcgaagccttgttactgttgacaatagaaacaaacttagaatgcatgatttgttgagagacatgggaag 6534939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 6589400 - 6589318
Alignment:
Q  48 cttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    ||||| ||||||  |||||| ||||||||  ||||||||| ||| |||||||||||| ||||  |||||||||||||| ||||    
T  6589400 cttgttgagcgagcccttgtaactgttgacaataggaacaagctaagaatgcatgatctgttaagagatatgggaagacaaat 6589318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 6757054 - 6757151
Alignment:
Q  33 attggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    |||||||| || || ||||| ||| ||| |||||| || |||||  | ||||||| |||||||||||||| ||||||| |||| ||||||||| ||||    
T  6757054 attggaattaaagttcttgtagagtgaacccttgtaaccgttgacaacaggaacaagcttagaatgcatggtttgttgagagacatgggaagacaaat 6757151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 6714449 - 6714491
Alignment:
Q  82 ggaacaggcttagaatgcatgatttgttgcgagatatgggaag 124  Q
    |||||| |||||||||||||||||||||| |||| ||||||||    
T  6714449 ggaacaagcttagaatgcatgatttgttgagagacatgggaag 6714491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 6726524 - 6726613
Alignment:
Q  35 tggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaag 124  Q
    |||||| || |||||||| ||| ||  |||||| ||||||||  ||  |||||  ||||||||||||||||||||| |||| ||||||||    
T  6726524 tggaattaaagtccttgttgagagagcccttgtaactgttgacaatgagaacaaacttagaatgcatgatttgttgagagacatgggaag 6726613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 6771795 - 6771892
Alignment:
Q  33 attggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    |||||||| || |||||| | ||||||  |||||| ||||||||  |  | |||| |||||||||||||||||||||| |||| ||||| ||| ||||    
T  6771795 attggaattaaagtccttcttgagcgagcccttgttactgttgacaaaggaaacaagcttagaatgcatgatttgttgagagacatggggagacaaat 6771892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 6795062 - 6795130
Alignment:
Q  62 ccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    |||||| ||||||||  |||  |||| |||||||||||||||||||||  |||| ||||||||| ||||    
T  6795062 ccttgtaactgttgacaataataacaagcttagaatgcatgatttgttaagagacatgggaagacaaat 6795130  T

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Target: chr2 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 22585720 - 22585600
Alignment:
Q  25 atgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaag 124  Q
    |||||| |||||||||||  |||||||| ||| |||||||||||| ||||||||||| |||||||||| |||||||||||||| ||||||||||||||||    
T  22585720 atgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacaggcttggaatgcatgatttgctgcgagatatgggaag 22585621  T
Q  125 agaaatcgttcgtgagaaatc 145  Q
    || ||| |||| |||| ||||    
T  22585620 aggaattgttcttgaggaatc 22585600  T

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Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 8876382 - 8876526
Alignment:
Q  1 atatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgca 100  Q
    |||| ||| |||| ||||| |||||| | | ||||||||||| ||| ||||| || ||||||||||| ||  | ||||| ||||| | |||| |||||||    
T  8876382 atattttaaatgggtgtgaactttatcctgaaattggaataagtgttcttgttgaacgaagccttgtaaccatggatgaaaggaatatgcttggaatgca 8876481  T
Q  101 tgatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 145  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||    
T  8876482 tgatttgttgacagatatgggaagagaaatcattcgtgagaaatc 8876526  T

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Target: scaffold0286 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 5295 - 5386
Alignment:
Q  33 attggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaag 124  Q
    |||||||| || |||||||| |||||||||||||| ||||||||  ||||||||| ||||||||||||||| |||||| |||||||||||||    
T  5295 attggaattaaagtccttgtagagcgaagccttgtaactgttgacaataggaacaagcttagaatgcatgacttgttgagagatatgggaag 5386  T

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Target: scaffold0294 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 10056 - 9947
Alignment:
Q  36 ggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatcgttc 135  Q
    ||||||| ||||||||| |||||||||||| | ||||| ||||||| ||| |  ||| ||||||||||||| || |||||||||||||| |||||| |||    
T  10056 ggaataagtgtccttgttgagcgaagccttctaactgtcgatgataagaatacacttggaatgcatgatttattacgagatatgggaagggaaatcattc 9957  T
Q  136 gtgagaaatc 145  Q
    |||| |||||    
T  9956 gtgaaaaatc 9947  T

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Target: scaffold0373 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 11239 - 11171
Alignment:
Q  62 ccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaat 130  Q
    |||||| ||||||||  |||  |||| |||||||||||||||||||||  |||| ||||||||| ||||    
T  11239 ccttgtaactgttgacaataataacaagcttagaatgcatgatttgttaagagacatgggaagacaaat 11171  T

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