View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12909_high_10 (Length: 312)
Name: NF12909_high_10
Description: NF12909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12909_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 26610898 - 26610710
Alignment:
| Q |
19 |
aaatccattaatcataagctattacagaacaaatccaccaaaataacacagggcagttacagttaggtttgaaattaaggatatactttaatatttttat |
118 |
Q |
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| T |
26610898 |
aaatccattaatcataagctattacagaacaaatccaccaaaataacacagggcagttacagttaggtttgaaattaaggatatactttaatatttttat |
26610799 |
T |
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| Q |
119 |
aggaatctaccgtagttattatgtctttagctccctagtagatcaatggaatatctcttcaagcttaaaacatttttattgacaaataa |
207 |
Q |
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| T |
26610798 |
aggaatctaccgtagttattatgtctttagctccctagtagatcaatggaatatctcttcaagcttaaaacatttttattgacaaataa |
26610710 |
T |
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