View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12909_high_11 (Length: 272)
Name: NF12909_high_11
Description: NF12909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12909_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 2768196 - 2768452
Alignment:
| Q |
1 |
gaaaaagttacagccacgcatccaaacatatgttaaagtaggatggtatacc-ttataggttataatgctttgatgcaacgggtgttaaaaagcatacga |
99 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2768196 |
gaaaaagttacagccacgcatccaaacatatgctaaagtaggatggtatacccttataggttataatgctttgatgcaacgggtgttaaaaagcatacga |
2768295 |
T |
|
| Q |
100 |
taaactgaagaaagacgttaacatcagttaacgaagataacagtttttattttcctcatcaattagcacttccaagtgttaaaatgagattacctgaagt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2768296 |
taaactgaagaaagacgttaacatcagttaacgaagataacagtttttattttcctcatcaattagcacttccaagtgttaaaatgagattacctgaagt |
2768395 |
T |
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| Q |
200 |
aatttatgtgtcgtacgaggaggcttaggttcctcgggtggatcctgcacttgtttc |
256 |
Q |
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||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
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| T |
2768396 |
aatttatgtgtcgtacgaggaggcttaggttccacaggtggatcctgcacttgtttc |
2768452 |
T |
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