View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1290R-Insertion-9 (Length: 291)
Name: NF1290R-Insertion-9
Description: NF1290R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1290R-Insertion-9 |
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Alignment Details
Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 8270819 - 8270738
Alignment:
| Q |
203 |
gtagtggtttcaacactcgttctaagctttcttatttgtttcaatgtattttggtttatgtcctccaatcttgtttcttgtt |
284 |
Q |
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| T |
8270819 |
gtagttgtttcaacactcgttataagctttcttatttgtttcaatgtattttggtttatgtcctccaatcttgtttattgtt |
8270738 |
T |
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Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 8270858 - 8270794
Alignment:
| Q |
10 |
caaacatgttcttcaaaaaggcatttgtaacataaacatgtagtggtttcaacactcgttctaag |
74 |
Q |
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| T |
8270858 |
caaacatgttcttcaaaaaggcatttgtaacataaacatgtagttgtttcaacactcgttataag |
8270794 |
T |
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