View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1290_high_14 (Length: 255)
Name: NF1290_high_14
Description: NF1290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1290_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 196328 - 196103
Alignment:
| Q |
1 |
ataatataaagaattaaaagataatatatgattttattgataagatcaccatttcaatctgctggcttagagttttaatattagtttgttggataaatca |
100 |
Q |
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| T |
196328 |
ataatataaagaattaaaagataatatatgattttattgataagatcaccatttcaatctgctggcttagagttttaatattagtttgttggataaatca |
196229 |
T |
|
| Q |
101 |
atgggcaattcacatggaaataacagagcaccaccttctgagatcttgtaagcatccaataaagcaaatatgaaataatatattcaagttgcaaataaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
196228 |
atgggcaattcacatggaaataacagagcaccaccttctgagatcttgtaagcatccaataaagcaaatatgaaataatatattcaagttgcaaataaat |
196129 |
T |
|
| Q |
201 |
aatcatctacatacacataactgacc |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
196128 |
aatcatctacatacacataactgacc |
196103 |
T |
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