View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1290_low_11 (Length: 471)
Name: NF1290_low_11
Description: NF1290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1290_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 91 - 449
Target Start/End: Original strand, 7906488 - 7906846
Alignment:
| Q |
91 |
tgagcaatattatcaacactttgtgaatcatgttcaacataagcagaattataagcattacaaaacagtttgtgcgattggcggagaaattgaagaaaca |
190 |
Q |
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| T |
7906488 |
tgagcaatattatcaacactttgtgaatcatgttcaacataagcagatttataaacatcacaaaacagtttgtgtggttggcggagaaattgaagaaaca |
7906587 |
T |
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| Q |
191 |
agccacgattgaacgagattgttacacctctcccaaacatcgtaattcagatcatcaggaggtaagacaccgatcgttccatcaacgaaacggaatttgt |
290 |
Q |
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| T |
7906588 |
agccacgattgaacgagattgttacacagctcccaaacatcgtaattcagatcatcaggaggtaagataccgatcgttccatcaacgaaatggaatttgt |
7906687 |
T |
|
| Q |
291 |
tattgagaatcaacacgcgtttcatcgaccgtgcccaaacatgatagtttgaatcggtgagaagtggtgtgatggtaaccgatgtaggacttccacttgg |
390 |
Q |
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| T |
7906688 |
tcttgagaatcaacacgcttttcatcgaccgtgcccaaacataatagtttgaatcggtgagaagtggtgtgatagtaaccgatgtaggacttccacttgg |
7906787 |
T |
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| Q |
391 |
atgaatgtaggatggtctcgcttgcaattctgagatctgattcgccatcaatggaaggg |
449 |
Q |
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| T |
7906788 |
atgaatgtaggatggactcgcttgcaattctgagatctgattcgccatcaatggaaggg |
7906846 |
T |
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