View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1290_low_24 (Length: 281)

Name: NF1290_low_24
Description: NF1290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1290_low_24
NF1290_low_24
[»] chr7 (59 HSPs)
chr7 (1-281)||(19590785-19591065)
chr7 (1-281)||(32004619-32004899)
chr7 (36-281)||(38858936-38859181)
chr7 (1-281)||(19830680-19830959)
chr7 (1-281)||(34533796-34534076)
chr7 (1-281)||(37787028-37787307)
chr7 (33-281)||(2658844-2659092)
chr7 (1-281)||(35288908-35289186)
chr7 (33-267)||(29099869-29100103)
chr7 (33-281)||(23952735-23952984)
chr7 (35-281)||(4641738-4641981)
chr7 (32-281)||(19590530-19590769)
chr7 (1-187)||(4477800-4477986)
chr7 (32-281)||(19830425-19830664)
chr7 (34-278)||(4478004-4478237)
chr7 (32-281)||(29100152-29100391)
chr7 (32-281)||(35289202-35289441)
chr7 (125-281)||(37786772-37786927)
chr7 (32-277)||(38858652-38858887)
chr7 (32-281)||(32004915-32005154)
chr7 (32-265)||(34534092-34534315)
chr7 (33-281)||(4641445-4641683)
chr7 (32-280)||(23953031-23953268)
chr7 (32-281)||(2659141-2659380)
chr7 (170-281)||(38160956-38161067)
chr7 (160-281)||(28584341-28584462)
chr7 (160-281)||(28583444-28583565)
chr7 (52-198)||(9393823-9393968)
chr7 (32-198)||(35578986-35579142)
chr7 (32-107)||(26026620-26026695)
chr7 (32-107)||(27245506-27245581)
chr7 (125-218)||(9181600-9181692)
chr7 (32-198)||(35579188-35579344)
chr7 (52-107)||(11971507-11971562)
chr7 (52-107)||(25637520-25637575)
chr7 (32-107)||(48247893-48247968)
chr7 (52-105)||(15712536-15712589)
chr7 (52-105)||(16081470-16081523)
chr7 (125-181)||(32427406-32427461)
chr7 (52-107)||(786952-787007)
chr7 (32-107)||(5334172-5334247)
chr7 (32-107)||(7732790-7732864)
chr7 (125-192)||(27245297-27245364)
chr7 (125-250)||(34595158-34595282)
chr7 (52-107)||(35160970-35161025)
chr7 (52-107)||(48247760-48247815)
chr7 (125-167)||(26026437-26026478)
chr7 (52-105)||(787104-787157)
chr7 (32-121)||(9394034-9394123)
chr7 (52-105)||(16081621-16081674)
chr7 (125-218)||(25637584-25637676)
chr7 (125-162)||(26048071-26048108)
chr7 (66-107)||(26048117-26048158)
chr7 (125-162)||(28687885-28687922)
chr7 (52-109)||(33880907-33880964)
chr7 (125-162)||(48247977-48248014)
chr7 (67-107)||(9181746-9181786)
chr7 (125-193)||(24929689-24929757)
chr7 (125-193)||(33880971-33881038)
[»] chr4 (92 HSPs)
chr4 (1-281)||(45082684-45082964)
chr4 (1-281)||(46193410-46193690)
chr4 (1-281)||(15523240-15523519)
chr4 (1-281)||(23494703-23494983)
chr4 (45-281)||(22434184-22434420)
chr4 (32-281)||(48526473-48526721)
chr4 (1-281)||(54995074-54995353)
chr4 (1-281)||(2118298-2118579)
chr4 (1-281)||(12234589-12234869)
chr4 (32-281)||(25447252-25447501)
chr4 (33-281)||(11153151-11153399)
chr4 (34-251)||(12503471-12503688)
chr4 (60-281)||(20470830-20471051)
chr4 (32-281)||(51021087-51021335)
chr4 (54-281)||(4219872-4220099)
chr4 (32-281)||(25937962-25938211)
chr4 (45-281)||(18751604-18751840)
chr4 (32-281)||(25937675-25937914)
chr4 (33-281)||(4219562-4219800)
chr4 (32-281)||(38962122-38962359)
chr4 (33-281)||(46193707-46193945)
chr4 (33-281)||(11153449-11153687)
chr4 (32-281)||(12234334-12234573)
chr4 (32-281)||(15523535-15523774)
chr4 (33-281)||(23494448-23494686)
chr4 (54-281)||(22434501-22434716)
chr4 (125-281)||(33109689-33109844)
chr4 (125-281)||(25447621-25447776)
chr4 (32-281)||(51020802-51021041)
chr4 (33-281)||(2118598-2118835)
chr4 (160-281)||(33109883-33110004)
chr4 (32-281)||(54995369-54995607)
chr4 (32-281)||(22170243-22170476)
chr4 (125-281)||(48526201-48526355)
chr4 (172-281)||(18763951-18764060)
chr4 (172-281)||(48713777-48713886)
chr4 (32-218)||(12503737-12503913)
chr4 (169-281)||(20958288-20958399)
chr4 (125-281)||(45082437-45082590)
chr4 (169-267)||(43243708-43243806)
chr4 (32-198)||(17504061-17504217)
chr4 (160-281)||(16690941-16691062)
chr4 (169-281)||(35363028-35363141)
chr4 (158-281)||(10258304-10258427)
chr4 (160-267)||(43281210-43281316)
chr4 (45-198)||(40160396-40160549)
chr4 (160-281)||(16691491-16691611)
chr4 (169-267)||(44892576-44892674)
chr4 (160-281)||(48294961-48295083)
chr4 (45-181)||(35193610-35193744)
chr4 (172-281)||(48293599-48293708)
chr4 (160-228)||(43242328-43242396)
chr4 (32-107)||(54440871-54440946)
chr4 (174-251)||(20957224-20957301)
chr4 (60-187)||(35193406-35193523)
chr4 (180-281)||(48708300-48708401)
chr4 (54-187)||(17504283-17504407)
chr4 (65-144)||(10795650-10795730)
chr4 (32-107)||(14440130-14440205)
chr4 (32-107)||(35643736-35643811)
chr4 (32-121)||(18751903-18751993)
chr4 (32-121)||(40160247-40160337)
chr4 (216-281)||(16318251-16318316)
chr4 (169-222)||(44220805-44220858)
chr4 (160-281)||(44890522-44890643)
chr4 (52-107)||(28465250-28465305)
chr4 (32-107)||(28465383-28465458)
chr4 (32-107)||(34789551-34789626)
chr4 (52-107)||(34789704-34789759)
chr4 (34-105)||(34807443-34807514)
chr4 (32-107)||(46736957-46737032)
chr4 (34-107)||(229330-229403)
chr4 (32-162)||(26974407-26974528)
chr4 (52-105)||(45838869-45838922)
chr4 (52-107)||(21034558-21034613)
chr4 (32-107)||(33777791-33777866)
chr4 (52-107)||(45838716-45838771)
chr4 (52-107)||(54440738-54440793)
chr4 (178-233)||(55189581-55189636)
chr4 (52-107)||(55677279-55677334)
chr4 (125-167)||(12593143-12593184)
chr4 (125-187)||(14439926-14439988)
chr4 (125-218)||(18965208-18965300)
chr4 (125-167)||(46736774-46736815)
chr4 (125-217)||(229545-229636)
chr4 (45-106)||(18965306-18965367)
chr4 (58-107)||(28166173-28166222)
chr4 (125-218)||(34789450-34789542)
chr4 (125-162)||(45838933-45838970)
chr4 (67-107)||(16214832-16214872)
chr4 (55-107)||(41608544-41608596)
chr4 (125-157)||(46737041-46737073)
[»] chr2 (78 HSPs)
chr2 (1-281)||(18450835-18451115)
chr2 (1-281)||(43058593-43058872)
chr2 (1-281)||(40815350-40815630)
chr2 (33-281)||(22374617-22374865)
chr2 (33-281)||(7446638-7446886)
chr2 (1-281)||(40027400-40027680)
chr2 (34-279)||(239645-239890)
chr2 (45-281)||(28616918-28617154)
chr2 (32-281)||(11090811-11091060)
chr2 (1-267)||(3025724-3025988)
chr2 (32-281)||(1978400-1978649)
chr2 (1-281)||(14432402-14432681)
chr2 (33-281)||(8425360-8425607)
chr2 (55-281)||(26538403-26538619)
chr2 (32-281)||(239358-239596)
chr2 (32-281)||(1978113-1978352)
chr2 (32-281)||(22374325-22374564)
chr2 (32-281)||(40815646-40815885)
chr2 (33-281)||(11090526-11090764)
chr2 (32-281)||(40027145-40027384)
chr2 (33-281)||(18451133-18451371)
chr2 (34-281)||(43058338-43058575)
chr2 (54-281)||(7446347-7446567)
chr2 (54-281)||(8425684-8425900)
chr2 (34-281)||(28616618-28616856)
chr2 (33-280)||(3025472-3025708)
chr2 (125-281)||(26538102-26538257)
chr2 (168-281)||(28847122-28847235)
chr2 (125-281)||(14432147-14432302)
chr2 (160-281)||(20444754-20444875)
chr2 (171-281)||(35781093-35781203)
chr2 (171-281)||(20440461-20440571)
chr2 (160-281)||(35779713-35779834)
chr2 (160-281)||(8972242-8972363)
chr2 (173-281)||(15551504-15551612)
chr2 (33-249)||(28143333-28143538)
chr2 (169-258)||(15552482-15552570)
chr2 (127-187)||(31797166-31797225)
chr2 (32-107)||(4809181-4809256)
chr2 (52-107)||(11539807-11539862)
chr2 (32-107)||(38008253-38008328)
chr2 (32-250)||(62993-63201)
chr2 (32-105)||(15550976-15551049)
chr2 (125-218)||(44219712-44219804)
chr2 (32-100)||(6949628-6949696)
chr2 (125-218)||(14942230-14942324)
chr2 (32-107)||(13315666-13315741)
chr2 (32-107)||(13399722-13399797)
chr2 (33-107)||(43215878-43215952)
chr2 (32-105)||(42192411-42192484)
chr2 (34-107)||(44219813-44219886)
chr2 (55-107)||(38008120-38008172)
chr2 (52-107)||(649695-649750)
chr2 (52-107)||(4356078-4356133)
chr2 (52-107)||(6949774-6949829)
chr2 (52-107)||(11539960-11540015)
chr2 (52-107)||(16175671-16175726)
chr2 (32-107)||(20127906-20127981)
chr2 (52-107)||(20128059-20128114)
chr2 (52-107)||(32418326-32418381)
chr2 (32-107)||(32418459-32418534)
chr2 (125-187)||(33920710-33920772)
chr2 (32-107)||(33920914-33920988)
chr2 (53-107)||(4809048-4809102)
chr2 (125-187)||(5560936-5560998)
chr2 (125-187)||(13399520-13399582)
chr2 (125-167)||(15550793-15550834)
chr2 (125-250)||(20128123-20128247)
chr2 (126-192)||(43160397-43160463)
chr2 (125-162)||(4356142-4356179)
chr2 (125-162)||(4809002-4809039)
chr2 (125-218)||(6949519-6949612)
chr2 (32-105)||(9330051-9330124)
chr2 (125-218)||(11539705-11539798)
chr2 (125-162)||(11540024-11540061)
chr2 (125-218)||(16175735-16175828)
chr2 (125-162)||(42192628-42192665)
chr2 (125-192)||(43160103-43160170)
[»] chr6 (57 HSPs)
chr6 (32-281)||(22219644-22219893)
chr6 (1-281)||(11445247-11445527)
chr6 (1-281)||(20741361-20741644)
chr6 (1-281)||(12935162-12935442)
chr6 (1-281)||(18504924-18505204)
chr6 (45-281)||(31470320-31470556)
chr6 (33-281)||(10899944-10900182)
chr6 (1-281)||(11276595-11276865)
chr6 (1-281)||(18257397-18257677)
chr6 (50-281)||(23075437-23075668)
chr6 (51-281)||(2319677-2319906)
chr6 (33-281)||(4811549-4811796)
chr6 (1-281)||(15827643-15827925)
chr6 (32-281)||(10900231-10900470)
chr6 (32-281)||(18257142-18257381)
chr6 (33-281)||(20741105-20741343)
chr6 (34-281)||(28472642-28472878)
chr6 (33-281)||(11276884-11277122)
chr6 (33-281)||(15827943-15828181)
chr6 (32-281)||(18505220-18505459)
chr6 (32-281)||(2322520-2322758)
chr6 (32-281)||(11444992-11445231)
chr6 (125-281)||(29859831-29859985)
chr6 (125-281)||(31470701-31470856)
chr6 (32-281)||(12935458-12935697)
chr6 (34-281)||(1149734-1149972)
chr6 (45-156)||(1149558-1149669)
chr6 (198-281)||(1149470-1149553)
chr6 (125-258)||(4811400-4811532)
chr6 (189-281)||(23074004-23074096)
chr6 (32-144)||(28472929-28473041)
chr6 (173-281)||(29035069-29035177)
chr6 (160-281)||(3835145-3835266)
chr6 (160-281)||(29033439-29033560)
chr6 (169-233)||(18296198-18296262)
chr6 (1-173)||(32836114-32836286)
chr6 (60-193)||(35163516-35163639)
chr6 (32-193)||(31573817-31573969)
chr6 (32-107)||(25472314-25472389)
chr6 (32-218)||(5114536-5114712)
chr6 (32-107)||(24640487-24640562)
chr6 (32-107)||(29891382-29891457)
chr6 (32-187)||(32836299-32836444)
chr6 (34-106)||(23074158-23074230)
chr6 (52-107)||(5114790-5114845)
chr6 (52-107)||(29891249-29891304)
chr6 (52-107)||(30251013-30251068)
chr6 (60-107)||(31073472-31073519)
chr6 (52-107)||(31574047-31574102)
chr6 (45-106)||(11523854-11523915)
chr6 (125-218)||(25472398-25472491)
chr6 (125-162)||(28636582-28636619)
chr6 (125-218)||(29891466-29891558)
chr6 (52-105)||(30250862-30250915)
chr6 (125-162)||(31073528-31073565)
chr6 (126-193)||(25468943-25469010)
chr6 (51-107)||(31073309-31073365)
[»] chr5 (71 HSPs)
chr5 (33-281)||(5818934-5819182)
chr5 (1-281)||(8647698-8647978)
chr5 (33-281)||(19359428-19359676)
chr5 (32-281)||(24331564-24331815)
chr5 (1-281)||(14215246-14215525)
chr5 (33-281)||(8461223-8461471)
chr5 (1-281)||(18182975-18183255)
chr5 (33-281)||(2864759-2865007)
chr5 (1-281)||(25000349-25000629)
chr5 (1-281)||(164196-164475)
chr5 (1-281)||(16018847-16019127)
chr5 (1-258)||(29454768-29455027)
chr5 (1-280)||(24361843-24362121)
chr5 (45-281)||(15371876-15372114)
chr5 (1-280)||(24325218-24325496)
chr5 (1-281)||(15709230-15709508)
chr5 (32-281)||(2865056-2865295)
chr5 (32-281)||(8647443-8647682)
chr5 (32-281)||(29455043-29455282)
chr5 (32-281)||(5819230-5819469)
chr5 (33-281)||(18183271-18183509)
chr5 (32-281)||(24362137-24362376)
chr5 (32-258)||(8460958-8461174)
chr5 (32-281)||(19359141-19359380)
chr5 (32-281)||(15708976-15709214)
chr5 (125-281)||(15372258-15372413)
chr5 (32-273)||(164492-164723)
chr5 (34-198)||(10721873-10722036)
chr5 (33-198)||(27307148-27307313)
chr5 (125-281)||(14215628-14215783)
chr5 (1-198)||(28494931-28495128)
chr5 (125-281)||(14463906-14464060)
chr5 (32-264)||(25000112-25000334)
chr5 (32-251)||(24331861-24332073)
chr5 (169-281)||(4222150-4222262)
chr5 (124-204)||(14462686-14462770)
chr5 (160-281)||(7349436-7349557)
chr5 (169-281)||(4219668-4219780)
chr5 (158-265)||(6018335-6018441)
chr5 (33-281)||(16018594-16018830)
chr5 (60-193)||(16752890-16753022)
chr5 (160-281)||(7348564-7348685)
chr5 (54-131)||(14463732-14463809)
chr5 (169-281)||(4623153-4623265)
chr5 (160-252)||(6019189-6019282)
chr5 (32-187)||(28495143-28495288)
chr5 (77-192)||(41834396-41834511)
chr5 (32-107)||(5161752-5161827)
chr5 (125-218)||(32305886-32305977)
chr5 (32-100)||(38900944-38901012)
chr5 (32-107)||(8418923-8418998)
chr5 (32-105)||(18149894-18149967)
chr5 (32-109)||(24325512-24325589)
chr5 (160-252)||(4624644-4624736)
chr5 (33-105)||(14340551-14340623)
chr5 (125-181)||(27307444-27307499)
chr5 (52-107)||(15029631-15029686)
chr5 (52-107)||(21371018-21371073)
chr5 (52-106)||(28289966-28290020)
chr5 (125-218)||(28290030-28290122)
chr5 (169-204)||(13814155-13814190)
chr5 (52-107)||(28289853-28289908)
chr5 (96-198)||(13557079-13557180)
chr5 (125-187)||(16752680-16752741)
chr5 (125-162)||(15029695-15029732)
chr5 (125-218)||(19291424-19291517)
chr5 (125-162)||(28289807-28289844)
chr5 (52-123)||(5161900-5161972)
chr5 (126-218)||(8419008-8419098)
chr5 (125-181)||(14340793-14340849)
chr5 (33-109)||(27307361-27307437)
[»] scaffold0951 (2 HSPs)
scaffold0951 (1-281)||(1927-2207)
scaffold0951 (32-281)||(1672-1911)
[»] chr8 (48 HSPs)
chr8 (1-281)||(13224900-13225179)
chr8 (32-281)||(11656748-11656997)
chr8 (33-281)||(19176295-19176543)
chr8 (33-281)||(41681426-41681674)
chr8 (1-281)||(9928914-9929194)
chr8 (36-281)||(44831252-44831497)
chr8 (33-281)||(33742927-33743174)
chr8 (33-281)||(31133512-31133760)
chr8 (33-281)||(12572155-12572391)
chr8 (77-281)||(33328476-33328680)
chr8 (1-281)||(4629802-4630071)
chr8 (45-194)||(9177724-9177873)
chr8 (127-281)||(34540934-34541088)
chr8 (32-281)||(19176591-19176830)
chr8 (32-281)||(41681139-41681377)
chr8 (32-281)||(9929958-9930197)
chr8 (33-281)||(33328163-33328401)
chr8 (32-281)||(12571868-12572108)
chr8 (32-281)||(13224646-13224884)
chr8 (34-281)||(11656460-11656698)
chr8 (33-281)||(31133225-31133463)
chr8 (32-281)||(9177937-9178175)
chr8 (32-277)||(44831546-44831781)
chr8 (125-239)||(33743304-33743417)
chr8 (178-281)||(11336959-11337062)
chr8 (125-281)||(4630177-4630326)
chr8 (160-281)||(10918131-10918252)
chr8 (174-267)||(8073985-8074077)
chr8 (32-120)||(28877192-28877281)
chr8 (32-107)||(9797028-9797103)
chr8 (32-107)||(28254595-28254670)
chr8 (160-207)||(43958264-43958311)
chr8 (32-106)||(18428063-18428137)
chr8 (32-218)||(18049658-18049835)
chr8 (125-181)||(18805267-18805322)
chr8 (32-107)||(5730985-5731060)
chr8 (52-107)||(7910938-7910993)
chr8 (34-109)||(28877070-28877145)
chr8 (32-107)||(34799249-34799324)
chr8 (60-107)||(2208884-2208931)
chr8 (52-107)||(16578418-16578473)
chr8 (52-107)||(18049913-18049968)
chr8 (36-107)||(41260430-41260501)
chr8 (125-187)||(28254812-28254874)
chr8 (32-105)||(599800-599873)
chr8 (52-101)||(15256155-15256204)
chr8 (125-218)||(28254493-28254586)
chr8 (55-107)||(35427137-35427189)
[»] chr3 (121 HSPs)
chr3 (1-281)||(39555583-39555862)
chr3 (33-281)||(31778658-31778906)
chr3 (1-281)||(4275624-4275904)
chr3 (32-281)||(43973731-43973980)
chr3 (33-281)||(5137273-5137521)
chr3 (33-281)||(17464496-17464744)
chr3 (33-281)||(37727222-37727470)
chr3 (1-281)||(32534964-32535244)
chr3 (1-281)||(30098020-30098303)
chr3 (1-281)||(26274572-26274852)
chr3 (1-281)||(29801676-29801956)
chr3 (45-281)||(20840865-20841101)
chr3 (45-281)||(25853239-25853475)
chr3 (33-281)||(23644756-23645005)
chr3 (45-258)||(26837388-26837601)
chr3 (33-258)||(41046991-41047215)
chr3 (1-265)||(24300577-24300841)
chr3 (33-281)||(22424819-22425066)
chr3 (89-281)||(27393666-27393858)
chr3 (32-281)||(39555878-39556117)
chr3 (33-281)||(37726934-37727172)
chr3 (32-281)||(41046705-41046944)
chr3 (33-281)||(25853529-25853767)
chr3 (32-281)||(5136985-5137224)
chr3 (32-281)||(31778953-31779192)
chr3 (33-281)||(20840565-20840803)
chr3 (32-281)||(24300857-24301096)
chr3 (33-281)||(23644467-23644705)
chr3 (130-280)||(48452995-48453144)
chr3 (34-281)||(27393880-27394117)
chr3 (32-281)||(43973446-43973684)
chr3 (32-281)||(32535260-32535503)
chr3 (54-281)||(30104487-30104703)
chr3 (32-281)||(26837657-26837895)
chr3 (56-281)||(22425138-22425353)
chr3 (37-252)||(26274873-26275077)
chr3 (32-281)||(17464792-17465032)
chr3 (169-281)||(29801361-29801473)
chr3 (160-281)||(23228427-23228547)
chr3 (160-281)||(25612396-25612517)
chr3 (172-281)||(51473433-51473542)
chr3 (1-198)||(2323466-2323658)
chr3 (46-198)||(37075980-37076133)
chr3 (45-181)||(50900637-50900772)
chr3 (169-267)||(32697128-32697226)
chr3 (160-281)||(50116828-50116949)
chr3 (160-281)||(51474753-51474874)
chr3 (33-192)||(8873784-8873943)
chr3 (172-268)||(18010176-18010272)
chr3 (33-198)||(27199995-27200150)
chr3 (160-281)||(25420560-25420681)
chr3 (32-193)||(8873989-8874138)
chr3 (65-181)||(55192222-55192328)
chr3 (33-192)||(49408087-49408233)
chr3 (169-281)||(37220562-37220674)
chr3 (32-193)||(37075781-37075932)
chr3 (32-107)||(43678464-43678539)
chr3 (32-107)||(46013724-46013799)
chr3 (32-107)||(51473157-51473232)
chr3 (175-281)||(45965943-45966049)
chr3 (34-181)||(49407900-49408037)
chr3 (32-107)||(44676774-44676849)
chr3 (32-107)||(49720673-49720748)
chr3 (32-107)||(51828842-51828917)
chr3 (33-107)||(41998399-41998473)
chr3 (32-105)||(29801587-29801660)
chr3 (32-105)||(40838954-40839027)
chr3 (32-105)||(49951717-49951790)
chr3 (125-250)||(55389641-55389765)
chr3 (52-107)||(34104806-34104861)
chr3 (52-107)||(34104970-34105025)
chr3 (45-198)||(36701411-36701554)
chr3 (32-107)||(39010375-39010450)
chr3 (32-107)||(47431866-47431941)
chr3 (172-222)||(23227320-23227370)
chr3 (32-121)||(27199856-27199946)
chr3 (211-281)||(37222041-37222111)
chr3 (125-218)||(50662798-50662890)
chr3 (125-162)||(32730775-32730812)
chr3 (56-109)||(33412332-33412385)
chr3 (125-218)||(51828343-51828436)
chr3 (33-187)||(37847123-37847267)
chr3 (125-193)||(40275187-40275255)
chr3 (52-107)||(330158-330213)
chr3 (52-107)||(2044440-2044495)
chr3 (189-251)||(25419179-25419242)
chr3 (52-107)||(32730558-32730613)
chr3 (60-107)||(43222559-43222606)
chr3 (125-192)||(43222775-43222842)
chr3 (125-192)||(47431790-47431857)
chr3 (52-107)||(49720540-49720595)
chr3 (52-107)||(50662734-50662789)
chr3 (125-187)||(51828055-51828117)
chr3 (52-107)||(51828126-51828181)
chr3 (32-107)||(51828259-51828334)
chr3 (52-106)||(14654513-14654567)
chr3 (125-187)||(14654577-14654639)
chr3 (125-187)||(40839038-40839100)
chr3 (125-187)||(43222488-43222550)
chr3 (52-106)||(44676642-44676696)
chr3 (125-218)||(44676858-44676950)
chr3 (125-187)||(49720469-49720531)
chr3 (35-109)||(50900833-50900907)
chr3 (125-187)||(50900914-50900975)
chr3 (125-167)||(52236935-52236976)
chr3 (125-250)||(52237203-52237327)
chr3 (32-105)||(330007-330080)
chr3 (32-101)||(14654366-14654435)
chr3 (125-250)||(22370632-22370757)
chr3 (33-94)||(30097940-30098001)
chr3 (125-170)||(36701224-36701268)
chr3 (125-162)||(40838775-40838812)
chr3 (50-107)||(46013591-46013648)
chr3 (125-218)||(46013808-46013901)
chr3 (50-107)||(52236985-52237042)
chr3 (125-162)||(52375450-52375487)
chr3 (125-162)||(52375717-52375754)
chr3 (172-228)||(32695761-32695817)
chr3 (125-193)||(34105034-34105102)
chr3 (32-100)||(38535471-38535539)
chr3 (125-181)||(55389983-55390039)
[»] chr1 (73 HSPs)
chr1 (32-281)||(21856047-21856296)
chr1 (33-281)||(39154312-39154560)
chr1 (1-281)||(15173355-15173633)
chr1 (1-281)||(50970283-50970562)
chr1 (34-281)||(15646197-15646444)
chr1 (1-278)||(33143925-33144203)
chr1 (1-281)||(8678546-8678826)
chr1 (1-281)||(29307212-29307482)
chr1 (1-281)||(18984379-18984659)
chr1 (32-281)||(17433506-17433755)
chr1 (32-281)||(29869910-29870159)
chr1 (45-281)||(5539821-5540057)
chr1 (1-281)||(5962583-5962863)
chr1 (1-281)||(4636232-4636511)
chr1 (33-281)||(26859064-26859313)
chr1 (32-281)||(17112287-17112535)
chr1 (1-281)||(9019233-9019503)
chr1 (32-281)||(29306958-29307196)
chr1 (33-281)||(5540121-5540358)
chr1 (32-281)||(18984124-18984363)
chr1 (33-281)||(33144221-33144459)
chr1 (33-281)||(50970580-50970818)
chr1 (33-281)||(8678844-8679081)
chr1 (33-281)||(5962880-5963118)
chr1 (33-281)||(15173101-15173339)
chr1 (32-281)||(15646493-15646735)
chr1 (32-281)||(21856344-21856583)
chr1 (32-281)||(29869625-29869864)
chr1 (32-281)||(17433221-17433460)
chr1 (33-281)||(26859362-26859599)
chr1 (36-281)||(9018978-9019213)
chr1 (32-281)||(39154024-39154263)
chr1 (160-281)||(52268295-52268416)
chr1 (1-193)||(17088243-17088425)
chr1 (33-222)||(4636037-4636215)
chr1 (32-198)||(45048429-45048594)
chr1 (186-258)||(47827033-47827105)
chr1 (32-187)||(17088441-17088587)
chr1 (170-281)||(52269177-52269288)
chr1 (32-218)||(9992223-9992399)
chr1 (33-187)||(45048253-45048397)
chr1 (55-218)||(9833477-9833630)
chr1 (125-249)||(44802557-44802680)
chr1 (33-107)||(29021167-29021241)
chr1 (32-106)||(37505238-37505312)
chr1 (211-281)||(47826969-47827039)
chr1 (200-281)||(2733416-2733497)
chr1 (32-218)||(16298984-16299160)
chr1 (65-187)||(39485163-39485275)
chr1 (32-107)||(30787074-30787149)
chr1 (52-107)||(44582379-44582434)
chr1 (32-105)||(8229811-8229884)
chr1 (32-105)||(44954397-44954470)
chr1 (125-193)||(8229732-8229800)
chr1 (125-193)||(17641750-17641818)
chr1 (52-107)||(443873-443928)
chr1 (52-107)||(16298851-16298906)
chr1 (32-107)||(17641534-17641609)
chr1 (52-107)||(29439100-29439155)
chr1 (52-107)||(37421331-37421386)
chr1 (52-107)||(37505390-37505445)
chr1 (52-107)||(44582226-44582281)
chr1 (52-107)||(50304951-50305006)
chr1 (52-106)||(9992477-9992531)
chr1 (52-106)||(23526861-23526915)
chr1 (77-166)||(39485377-39485466)
chr1 (125-187)||(44954612-44954674)
chr1 (125-162)||(8230027-8230064)
chr1 (66-107)||(34555716-34555757)
chr1 (125-162)||(34555766-34555803)
chr1 (129-198)||(44291701-44291769)
chr1 (125-162)||(44954349-44954386)
chr1 (127-187)||(29021252-29021311)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1-281)||(10884-11163)
scaffold0417 (33-267)||(10640-10864)
[»] scaffold0157 (2 HSPs)
scaffold0157 (34-251)||(16789-17006)
scaffold0157 (32-218)||(16564-16740)
[»] scaffold0007 (4 HSPs)
scaffold0007 (33-281)||(64597-64845)
scaffold0007 (125-281)||(64307-64462)
scaffold0007 (52-250)||(205690-205877)
scaffold0007 (33-198)||(205038-205194)
[»] scaffold0273 (2 HSPs)
scaffold0273 (45-247)||(4242-4444)
scaffold0273 (32-281)||(4508-4747)
[»] scaffold0027 (2 HSPs)
scaffold0027 (32-281)||(42174-42413)
scaffold0027 (32-266)||(42460-42683)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-281)||(5054-5331)
scaffold0295 (33-281)||(4798-5036)
[»] scaffold1223 (2 HSPs)
scaffold1223 (5-281)||(1015-1281)
scaffold1223 (125-281)||(758-912)
[»] scaffold0432 (2 HSPs)
scaffold0432 (60-281)||(9937-10156)
scaffold0432 (45-281)||(10187-10412)
[»] scaffold0019 (1 HSPs)
scaffold0019 (32-281)||(133974-134213)
[»] scaffold0176 (2 HSPs)
scaffold0176 (55-280)||(18841-19054)
scaffold0176 (189-281)||(19069-19161)
[»] scaffold1585 (1 HSPs)
scaffold1585 (161-281)||(572-692)
[»] scaffold0113 (1 HSPs)
scaffold0113 (172-281)||(28674-28783)
[»] scaffold0057 (2 HSPs)
scaffold0057 (160-281)||(61877-61998)
scaffold0057 (212-278)||(61036-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (170-264)||(471-565)
[»] scaffold0076 (1 HSPs)
scaffold0076 (183-281)||(8451-8549)
[»] scaffold0168 (1 HSPs)
scaffold0168 (160-237)||(7707-7784)
[»] scaffold0712 (3 HSPs)
scaffold0712 (32-105)||(6563-6636)
scaffold0712 (125-167)||(6777-6818)
scaffold0712 (126-218)||(6460-6551)
[»] scaffold0709 (3 HSPs)
scaffold0709 (32-105)||(6581-6654)
scaffold0709 (125-167)||(6795-6836)
scaffold0709 (126-218)||(6478-6569)
[»] scaffold0097 (2 HSPs)
scaffold0097 (32-107)||(46569-46644)
scaffold0097 (55-107)||(46436-46488)


Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 19590785 - 19591065
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  19590785 tctaagatatgtttcaaattagggtttttttggttagtgtgatgaatagaatagattcattgtgcccacatgttttattccttgttgatttcatggttga 19590884  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590885 gcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 19590984  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| |  ||||||||||||    
T  19590985 tgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaatt 19591065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 32004899 - 32004619
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||| |||||        |||||||||| | |||| |||||||| ||||| |||||||||||||||| ||||||||||||| |||||    
T  32004899 tctaagatatgtttcaagttagggtttttttggttagtgtgatgaatataatagattttttgtacccacatgttttattccttgttgatttcatggttga 32004800  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32004799 gcataggggtaggtctaaaaccgcttaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataat 32004700  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||| ||||||||  ||||||||||||    
T  32004699 tgaaggaccattttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 32004619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 36 - 281
Target Start/End: Original strand, 38858936 - 38859181
Alignment:
Q  36 agtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtc 135  Q
    |||||| | |||||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||    
T  38858936 agtgtgctgaatagaatagattctttgtgcccacatgcttaattccttgttgatttcatggttgagcataggggcaggtctaaaaccgcctaaaactatc 38859035  T
Q  136 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcagg 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  38859036 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgttttaaaagggcagg 38859135  T
Q  236 accagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||||||||||| ||||| ||||||||  ||||||||||||    
T  38859136 accaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 38859181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 19830680 - 19830959
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||         ||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  19830680 tctaagatatgtttcaaattagggttttttttgttagtgtgctgaatagaatagattcattgtgcccacatgttttattccttgttgatttcatggttga 19830779  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19830780 gcataggggtaggtctaaaaccgcctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataat 19830878  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| ||| ||||||| |||| ||||||| |||||||||||| |||||||| ||||| ||||||||  ||||||||||||    
T  19830879 tgaagtaccgttttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaatt 19830959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 34534076 - 34533796
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||| |||||        |||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  34534076 tctaagatatgtttcaagttagggtttttttggttagtgtgatgaatagaatagattctttgtgcccacatgttttattccttgttgattttatggttga 34533977  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34533976 gcataggggtaggtctaaaactgcctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataat 34533877  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| ||||||||| ||||||| |||||| ||| |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  34533876 tgaatgaccattttattctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 34533796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 37787028 - 37787307
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        ||||||| |||| |||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||    
T  37787028 tctaagatatgtttcaaattagg-tttttttggttagtatgttgaatagaatagattcattgtgcccacatgttttattgcttgttgatttcatggttga 37787126  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37787127 gcataggggtaggtctaaaactgccaaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 37787226  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| ||| |||||||||| | |||||| |||||||||||||||||||||| ||||| ||||||||  |||||| |||||    
T  37787227 tgaagaaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataatt 37787307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 2659092 - 2658844
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||| |||||||| ||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||| |||||| ||||||||||    
T  2659092 gttagtgtgatgaataaaatagattttttgtgcccgcatgttttattccttgttgatttcatggttgagcataggtgtaggtctaaaacggcctaaaact 2658993  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    | ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  2658992 gccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggc 2658893  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  2658892 aggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaatt 2658844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 35289186 - 35288908
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||| |||||        |||||||||| | |||||||||||||||  |||| |||||||||||||| ||||||||||||| |||||    
T  35289186 tctaagatatgtttcaagttagggtttttttggttagtgtgatgaatagaatagattct--gtgctcacatgttttattccttgttgatttcatggttga 35289089  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  35289088 gcataggggtaggtctaaaaccgcttaaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataat 35288989  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||| ||  ||||||||||||    
T  35288988 tgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaatt 35288908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 33 - 267
Target Start/End: Complemental strand, 29100103 - 29099869
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||| ||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||  |||||||||    
T  29100103 gttagtgtgctgaatataatagattctttgtgtccgcatgttttattccttgttgatttcatggttgagcatagaggtaggtctaaaacttcctaaaact 29100004  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  29100003 gtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 29099904  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgagga 267  Q
    |||| ||||||||||||||| ||||| ||||||||    
T  29099903 aggatcagtttcgtgagtaggccaaaacacgagga 29099869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 23952984 - 23952735
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||| ||||||||| ||||||||||||||||||||| |||||| |||||| |||||| ||||||||||||||||||| ||||||||||    
T  23952984 gttagtgtgctgaatataatagattccttgtgcccacatgttttattccttgttgttttcatggttgagtataggggtaggtttaaaactgcctaaaact 23952885  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
     |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  23952884 atcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggc 23952785  T
Q  233 aggaccagtttcgtgagta-gaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||||| ||||||||||| |  |||| ||||||||  ||||||||||||    
T  23952784 atgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaatt 23952735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 35 - 281
Target Start/End: Original strand, 4641738 - 4641981
Alignment:
Q  35 tagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgt 134  Q
    ||||||| | |||||||||||||  ||||||||||||||||||||| || |||||||||| ||||||||||| |||| || |||||||||||||||||||    
T  4641738 tagtgtgctgaatagaatagatttcttgtgcccacatgttttattccttattgatttcatggttgagcatagaggtatgtctaaaaccgcctaaaactgt 4641837  T
Q  135 catttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcag 234  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  4641838 catttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacag 4641937  T
Q  235 gaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||   |||||||| ||||| ||||||||  ||||||||||||    
T  4641938 gaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaatt 4641981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 19590769 - 19590530
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  19590769 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 19590680  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    |||||||||||||| |||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  19590679 ctgtcatttctctgggtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 19590581  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  19590580 gcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 19590530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 4477986 - 4477800
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  4477986 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaataaaatagattctttgtgcccacatgctttattccttgttgatttcatggttga 4477887  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    |||||||||||||| ||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||    
T  4477886 gcataggggtaggtctaaaactaccaaaaactgtcatttccctgcgtttctggagtttgaaaataggaggtaggactaaaactgcaa 4477800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 19830664 - 19830425
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||  ||||| ||||||| | |||||||||||| |||||          ||||||    
T  19830664 ggttagtgtgttgaataaagtggattctttgtacccacatgctttatttcttgtttatttcatggctgagcatagggggtaggt----------ctaaaa 19830575  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  19830574 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 19830476  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  19830475 gcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 19830425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 4478004 - 4478237
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactg 133  Q
    ||||||||||||||| | | |||||||||| |||| ||| ||||||| ||||| ||||||| |||||||||||||||||||          |||||||||    
T  4478004 ttagtgtgttcaataaagtggattctttgtacccatatgctttattccttgtttatttcatggttgagcataggggtaggt----------ctaaaactg 4478093  T
Q  134 tcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggca 233  Q
    | |||||||||||||| |||||  | |||  ||| | || ||||||||||||||||||||||||||||||||||| || || ||||||| ||||||||||    
T  4478094 ttatttctctgcgtttttggagaataaaatgagg-gataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttattctgttttaaaagggca 4478192  T
Q  234 ggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgta 278  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||    
T  4478193 ggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgta 4478237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 29100152 - 29100391
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||| | |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  29100152 ggttagtgtgttgaataaagtggattctttctacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 29100241  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    |||| |||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  29100242 ctgttatttctctgcgtttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagg 29100340  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| ||| |||||||||||||| ||||||||  ||||||||||||    
T  29100341 gcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaatt 29100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 35289202 - 35289441
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||| |||||||| |||||          ||||||    
T  35289202 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgaacatagggggtaggt----------ctaaaa 35289291  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    || | |||||||||||||| | |||  | ||||| || |||| ||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||    
T  35289292 ctattatttctctgcgtttttagagaat-aaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagg 35289390  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  35289391 gcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaatt 35289441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 37786927 - 37786772
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  37786927 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 37786829  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||    
T  37786828 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaatt 37786772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 277
Target Start/End: Complemental strand, 38858887 - 38858652
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||  ||||||| ||||||||||| ||||||||          ||||||    
T  38858887 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattcgttgtctatttcatggttgagcatagtgggtaggt----------ctaaaa 38858798  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||| |||||||||||| ||||||     
T  38858797 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaaga 38858699  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgt 277  Q
    |||||||||||||||||||||  ||||| ||||||||  ||||||||    
T  38858698 gcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgt 38858652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 32004915 - 32005154
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| ||||| |||||||||| ||||| ||||||| ||||| |||||||| |||||          ||||||    
T  32004915 ggttagtgtgttgaataaagtggattctttgtacccacgtgttttattccttgtttatttcatggttgaacatagggggtaggt----------ctaaaa 32005004  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||    
T  32005005 ctgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctattttaaaagg 32005103  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||||||||||  ||||| || |||||  ||||||||||||    
T  32005104 gcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaatt 32005154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 265
Target Start/End: Original strand, 34534092 - 34534315
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||| |||||| |||||||          ||||||    
T  34534092 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgaacataggtggtaggt----------ctaaaa 34534181  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||  ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||    
T  34534182 ctgtcatttctctgtttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaatgg 34534280  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgag 265  Q
    |||||| ||||||||||||||| ||||| ||||||    
T  34534281 gcaggatcagtttcgtgagtaggccaaaacacgag 34534315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 4641683 - 4641445
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggt-aggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||||||| ||| ||||| ||||||| ||||||||||||||  ||||          |||||||    
T  4641683 gttagtgtgttgaataaagtcgattctttgtacccacatgtttttttccttgtttatttcatggttgagcatagggggcaggt----------ctaaaac 4641594  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    | |||||||||||| ||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| ||||  ||||| |    
T  4641593 tatcatttctctgcatttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtttcaaaagag 4641495  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  4641494 caggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaatt 4641445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 32 - 280
Target Start/End: Original strand, 23953031 - 23953268
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | ||||||  || |||||||| |||||||  |||| ||||||| | |||||||||||||| ||          |||||||    
T  23953031 ggttagtgtgttgaataaagtggattctccgtacccacatgctttattccctgtttatttcatggctgagcataggggtatgt----------ctaaaac 23953120  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||| |||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  23953121 tgttatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttgaaaggg 23953219  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaat 280  Q
    | |||||||||||||||||||| |||| ||||||||  |||| ||||||    
T  23953220 cgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 2659141 - 2659380
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| ||||   | |||||||||| |||||||| ||||||| ||||| ||||||| ||||| |||||||| |||||          ||||||    
T  2659141 ggttagtgtgttgaataacgtggattctttgtacccacatgctttattccttgtttatttcatggttgaacatagggggtaggt----------ctaaaa 2659230  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  2659231 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 2659329  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||| ||| ||| ||||| | ||||||  |||| |||||||    
T  2659330 gcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaatt 2659380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 38161067 - 38160956
Alignment:
Q  170 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggatt 269  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||  | |||||||||||| ||||| | ||||||      
T  38161067 gtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggacc 38160968  T
Q  270 aaaagtgtaatt 281  Q
    ||||||||||||    
T  38160967 aaaagtgtaatt 38160956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 28584341 - 28584462
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || |||| |||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| || ||||| |||||||| ||| |||||     
T  28584341 aaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaag 28584440  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  ||||||||||||    
T  28584441 cacgaggacgaaaagtgtaatt 28584462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 28583565 - 28583444
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||  |||| || |||| ||||||||||| |||| | || ||||||| |||||     
T  28583565 aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatgagtaggccaaaa 28583466  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  ||||||||||||    
T  28583465 cacgaggaccaaaagtgtaatt 28583444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 198
Target Start/End: Complemental strand, 9393968 - 9393823
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttc 150  Q
    ||||||| |||| ||||||||||| |||| ||||| ||||||| |||||||||||||| ||||| || ||  || ||||||||||||||| ||| |||||    
T  9393968 tagattccttgtacccacatgttt-attctttgtttatttcatggttgagcatagggggtaggtctataattgcttaaaactgtcatttcactgtgtttc 9393870  T
Q  151 tggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    ||||| |||||||||||||||||||| ||||  |||| ||| ||||||    
T  9393869 tggag-ttgaaaataggaggtaggactaaaacagcaaaaaacatgata 9393823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 35579142 - 35578986
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | ||||| |||| |||||||| ||||||  ||||| ||||||| |||||||||||||| |||||          ||||||    
T  35579142 ggttagtgtgttgaataaagtggattccttgtacccacatgctttatttcttgtttatttcatggttgagcataggggataggt----------ctaaaa 35579053  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
     |||||||||||||||||||||||| |||||||||||| ||||||  |||| ||||| ||| ||||||    
T  35579052 atgtcatttctctgcgtttctggag-ttgaaaataggatgtaggattaaaactgcaaaaaacatgata 35578986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 26026620 - 26026695
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||| |||| |||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  26026620 ggttagtgtgttgaataaaatatattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 26026695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 27245506 - 27245581
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| |||||| | ||||||| |||| |||||||||||||||  ||||| ||||||| ||||||||||||    
T  27245506 ggttagtgtgctcaataaagtagattccttgtacccacatgttttattatttgtttatttcatggttgagcatagg 27245581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 9181692 - 9181600
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||| ||| || |||||| |||||||||    
T  9181692 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaat-atagtttaaggacgattttgttc 9181600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 35579188 - 35579344
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||| | |||||| |||| ||||||| | |||||| ||||||| ||||| |||| || |||||||||| |||||||||          ||||||    
T  35579188 ggttagtgtgctgaatagagtagactctttgtactcacatgctttattccttgtttattttatggttgagcatagggggtaggt----------ctaaaa 35579277  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    |||| ||||| |||||||| | ||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  35579278 ctgttatttccctgcgtttttagag-ttgaaaataggaggtatgactaaaactgcaaaaaacatgata 35579344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 11971562 - 11971507
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  11971562 tagattcattgtacccacatgttttattctttgtttatttcattgttgagcatagg 11971507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 25637520 - 25637575
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  25637520 tagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 25637575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 48247893 - 48247968
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||  |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  48247893 ggttagtgtgctgaataaagtagatttcttgtacccacatgttttattctttgtttatttcatggttgagcatagg 48247968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 15712589 - 15712536
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||    
T  15712589 tagattccttgtacccacatgttttattcgttgtttatttcatggttgagcata 15712536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 16081523 - 16081470
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||    
T  16081523 tagattccttgtacccacatgttttattctttgtttatttcatggttgagcata 16081470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 32427406 - 32427461
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 181  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||| ||||| ||||    
T  32427406 ctaaaactgtcatttctctgcgtttttagag-ttgaaaataggaggaaggactaaaa 32427461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 787007 - 786952
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| ||||| ||||||    
T  787007 tagattttttgtacccacatgttttattccttgtttatttcatggttgaccatagg 786952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 5334172 - 5334247
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| ||| |||| ||||||| ||||| ||||||| ||||||||||||    
T  5334172 ggttagtgtgctgaataaagtagattccttgtacccgcatgctttattccttgtttatttcatggttgagcatagg 5334247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 7732790 - 7732864
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| || ||||||||||||| ||||| ||||||| ||||||||||||    
T  7732790 ggttagtgtgctgaataaagtagattccttgtacc-acatgttttattctttgtttatttcatggttgagcatagg 7732864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 27245364 - 27245297
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 192  Q
    |||||||| |||||||| ||||||||||||||| ||||  ||||| |||||| |||| ||||| ||||    
T  27245364 ctaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaa 27245297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 34595158 - 34595282
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaat-aggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttg 223  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||| ||||| || |||| ||||| ||| |||||| || | |||| ||||||||| | |     
T  34595158 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaataagggggtagcactaaaactgcaa-aaacatgatagtttagggacgattttgttc-gatt 34595254  T
Q  224 taaaag-ggcaggaccagtttcgtgagt 250  Q
    ||||||  ||||||||| ||||||||||    
T  34595255 taaaagatgcaggaccattttcgtgagt 34595282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 35161025 - 35160970
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| |||| |||||||    
T  35161025 tagattcattgtacccacatgttttattctttgtttatttcatggttgggcatagg 35160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 48247815 - 48247760
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||| | ||||||||||    
T  48247815 tagattctttgtacccacatgatttattccttgtttatttcatggatgagcatagg 48247760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 26026478 - 26026437
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 167  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  26026478 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 26026437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 787104 - 787157
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||||| ||| |||| ||||||| ||||| ||||||| ||||||||||    
T  787104 tagattctttgtacccgcatgatttattccttgtttatttcatggttgagcata 787157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 9394034 - 9394123
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaac 121  Q
    |||| ||||||| |||| | | ||||| |||| ||||||| |||||||| || |  ||||||| |||||||||||||||| || ||||||    
T  9394034 ggtttgtgtgttgaataaagtggattccttgtacccacatattttattccttatctatttcatggttgagcataggggtaagtctaaaac 9394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 16081621 - 16081674
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||| ||||| ||||    
T  16081621 tagattctttgtacccacatgatttattccttgtttatttcatggttgaacata 16081674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 25637584 - 25637676
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||| || |||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  25637584 ctaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 25637676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 26048108 - 26048071
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  26048108 ctaaaactgtcatttctgtgcgtttctggagttggaaa 26048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 26048158 - 26048117
Alignment:
Q  66 ccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||    
T  26048158 ccacatgttttattctttgtttatttcatggttgagcatagg 26048117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 28687885 - 28687922
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  28687885 ctaaaactgtcatttctgtgcgtttctggagttggaaa 28687922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 33880907 - 33880964
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg 109  Q
    ||||||| |||| |||||||||| ||| | ||||| ||||||| ||||||||||||||    
T  33880907 tagattccttgtacccacatgttgtatcccttgtttatttcatggttgagcatagggg 33880964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 48247977 - 48248014
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  48247977 ctaaaactgtcatttctgtgcgtttctggagttggaaa 48248014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 9181746 - 9181786
Alignment:
Q  67 cacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||||| ||||| ||||||| ||||||||||||    
T  9181746 cacatgttttattctttgtttatttcatggttgagcatagg 9181786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 24929689 - 24929757
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    ||||||||||||||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| |||||    
T  24929689 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaaa 24929757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 33880971 - 33881038
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    ||||||||||||||| | ||||||||||||| ||||||||||| | || ||| |||| ||||| |||||    
T  33880971 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaataggggataagactaaaactgcaaaaaaaa 33881038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 45082684 - 45082964
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  45082684 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttga 45082783  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45082784 gcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 45082883  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  45082884 tgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaatt 45082964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 46193690 - 46193410
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||    
T  46193690 tctaagatatgtttcaaattagggttttcttggttagtgtgctgaatagaatagattccttgtgcctacatgttttattccttgttgatttcatggttga 46193591  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46193590 gcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 46193491  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||  ||||||||||||    
T  46193490 tgaaggacctttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 46193410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 15523519 - 15523240
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||    
T  15523519 tctaagatatgtttcaaattagg-tttttttggttagtgtgctgaatagaatagattcattgtgcccacgtgttttattccttgttgatttcatggttga 15523421  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  15523420 gcataggggtaggtctaaaaccgcataaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataat 15523321  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  15523320 tgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 15523240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 23494703 - 23494983
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  23494703 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttga 23494802  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||||||||||||| || ||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  23494803 gcataggggtaggtctaaaaccgcctaaaattgccatttctttacgtttctggagtttgagaataggatgtaggacgaaaaatgcaacaaaaatgataat 23494902  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  23494903 tgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 23494983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 45 - 281
Target Start/End: Complemental strand, 22434420 - 22434184
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22434420 aatataatagattcctcgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaactgtcatttctctg 22434321  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttc 244  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  22434320 cgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 22434221  T
Q  245 gtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||  ||||| ||||||||  ||||||||||||    
T  22434220 gtgagtatgccaaaacacgaggaccaaaagtgtaatt 22434184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 48526473 - 48526721
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  48526473 ggttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttgagca-aggggtaggtctaaaaccgcctaaaac 48526571  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  48526572 tgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgttttaaaaggg 48526671  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || |||||||||||||||||||||||| ||||||||  |||||| |||||    
T  48526672 caagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataatt 48526721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 54995353 - 54995074
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  54995353 tctaagatatgtttcaaattagg-tttttttggttagtgtgctgaataaaatagattccttgtgcccacatgttttattccttgttgatttcatggttga 54995255  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||| |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54995254 gcataagggtaggtctaaaaccgcctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 54995155  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||| ||||| |||||||||||||| ||||  ||||||||  ||||||||||||    
T  54995154 tgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaatt 54995074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 2118579 - 2118298
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||    
T  2118579 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatagaatagattccttgtgcccacatgttttatttcttgttgatttcatggttga 2118480  T
Q  101 gcataggg-gtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 199  Q
    |||||||| |||||| ||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2118479 gcatagggagtaggtctaaaaccgcctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 2118380  T
Q  200 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||| |||| |||||||||||||||| |||||||||||| ||||| ||| ||||  ||||||||||||    
T  2118379 ttgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaatt 2118298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 12234589 - 12234869
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||         ||||||||| | |||||||||||||  ||||||||||||||||||||| ||||||||||||| || ||    
T  12234589 tctaagatatgtttcaaattaggtttttttttgttagtgtgctgaatagaatagatttcttgtgcccacatgttttattccttgttgatttcatggtaga 12234688  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12234689 gcataggggtaggtctaaaactgcctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 12234788  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||||| || ||||||||||||||| ||||| ||||||||  |||||| |||||    
T  12234789 tgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataatt 12234869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 25447501 - 25447252
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||||||||||||| ||||||| | ||||||||||| || |||||||||| |||||||||| |||||||| |||||| ||||||||     
T  25447501 ggttagtgtgctgaatagaatagattccttgtgcctatatgttttattccttattgatttcatggttgagcatatgggtaggtctaaaactgcctaaaat 25447402  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  25447401 tgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 25447302  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||| ||||||| ||||| ||||||||  ||||||||||||    
T  25447301 caggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaatt 25447252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 11153399 - 11153151
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  11153399 gttagtgtgctgaatagaatagattcctagtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaact 11153300  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||||||||    
T  11153299 gtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctattttaaaagggc 11153200  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||||| ||| |||||||| ||||| ||||||||  |||||| |||||    
T  11153199 atgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataatt 11153151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 34 - 251
Target Start/End: Complemental strand, 12503688 - 12503471
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactg 133  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  12503688 ttagtgtgctgaatagaatagattccttgtgcccacatgttttattctttgttgatttcatggttgagcataggggtaggtctaaaatcgcctaaaactg 12503589  T
Q  134 tcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggca 233  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||     
T  12503588 taatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcg 12503489  T
Q  234 ggaccagtttcgtgagta 251  Q
    ||| ||||||||||||||    
T  12503488 ggatcagtttcgtgagta 12503471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 60 - 281
Target Start/End: Original strand, 20470830 - 20471051
Alignment:
Q  60 ttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttg 159  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  20470830 ttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaactttcatttctctgcgtttctggagtttg 20470929  T
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| | |||||||||||| ||||| |||||     
T  20470930 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaa 20471029  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  ||||||||||||    
T  20471030 cacgaggaccaaaagtgtaatt 20471051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 51021087 - 51021335
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||| ||||||||  |||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||     
T  51021087 ggttagtgtgctgaatataatagatttattgtgcccgcatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaat 51021186  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||| ||||||||    
T  51021187 tgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataattaaaggaccgttttgttgtgttttaaaaggg 51021285  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| |||||||||||| ||||| ||||||||| ||||||||||||    
T  51021286 caggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaatt 51021335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 54 - 281
Target Start/End: Original strand, 4219872 - 4220099
Alignment:
Q  54 gattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctgg 153  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||     
T  4219872 gattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtgggtctaaaaccgcctaaaactgttatttctctgcgtttttga 4219971  T
Q  154 agtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtaga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||||||||||||||     
T  4219972 agtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaagagcaggatcagtttcgtgagtagg 4220071  T
Q  254 ccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| ||||||||  ||||||||||||    
T  4220072 ccaaaacacgaggaccaaaagtgtaatt 4220099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 25937962 - 25938211
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||| ||||| | |||| ||||||||| ||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  25937962 ggttggtgtgctgaatataatagattccttgtgcccacatgttttattccttgttaatttcatggttgagcatagaggtaggtctaaaaccgcataaaac 25938061  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    || ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  25938062 tgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaaggg 25938161  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| |||||||||||| ||||| ||| ||||  ||||||||||||    
T  25938162 caggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaatt 25938211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 45 - 281
Target Start/End: Complemental strand, 18751840 - 18751604
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||| ||||||||| || |||||||||||| ||||| ||||||||||||| |||||||||||||||| || |||||||||||||||||| ||||| ||||    
T  18751840 aataaaatagattccttatgcccacatgttgtattccttgttgatttcatggttgagcataggggtaagtctaaaaccgcctaaaactgccatttttctg 18751741  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttc 244  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||| |||||||||     
T  18751740 cgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgttttaaaagggcatgaccagtttt 18751641  T
Q  245 gtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
     ||||||| ||||| ||||||||  ||||||||||||    
T  18751640 atgagtaggccaaaacacgaggaccaaaagtgtaatt 18751604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 25937914 - 25937675
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||||||||||| ||||| ||||||| |||||||||| |||||||||          ||||||    
T  25937914 ggttagtgtgttgaataaagtggattctttgtacccacatgttttattccttgtttatttcatggttgagcatatggggtaggt----------ctaaaa 25937825  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |  ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  25937824 ctgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 25937726  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| | ||| ||||||||  |||| |||||||    
T  25937725 gcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaatt 25937675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 4219800 - 4219562
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||||              
T  4219800 gttagtgtgttgaataaagtggattctttgtacccacatgctttattcattgtttatttcatggttgagcataggggataggtttaaaac---------- 4219711  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| | || ||||| ||    
T  4219710 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttttattttaaaatgg 4219612  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| ||||| ||||||||  |||| |||||||    
T  4219611 caggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatt 4219562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 38962122 - 38962359
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| || | ||| ||||||| ||||| |||| ||||||||||||||||||||||          |||||||    
T  38962122 ggttagtgtgttgaataaagtggattctttgtacc-agatgctttattctttgtttattttatagttgagcataggggtaggt----------ctaaaac 38962210  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  38962211 tgtcatttctctgcgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 38962309  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||||||||||||||| ||||||||| ||||||||  |||| |||||||    
T  38962310 ccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaatt 38962359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 46193707 - 46193945
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  46193707 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 46193796  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||| |||||| ||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  46193797 tgtcaattctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgttttgttctgttttaaaaggg 46193895  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| |||||||||||| ||||| ||||||||  ||||||||||||    
T  46193896 caggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 46193945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 11153449 - 11153687
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||||||||||||      |||    | ||||||||    
T  11153449 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggg-----taa----gtctaaaact 11153539  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    || |||||||||||||| |||||  | ||||| |  ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||    
T  11153540 gttatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaacgttttgttctgttttaaaatggc 11153638  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  11153639 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 11153687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 12234573 - 12234334
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| ||||||||||||             
T  12234573 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggtttaaaac--------- 12234483  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
     ||| |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  12234482 -tgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 12234385  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||| ||  ||||| || |||||  ||||||||||||    
T  12234384 gcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaatt 12234334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 15523535 - 15523774
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||| ||||| |||||||| ||||||| ||||| ||||||| ||| |||||||||| |||||          ||||||    
T  15523535 ggttagtgtgttgaataaagtggattatttgtacccacatgctttattccttgtttatttcatggttaagcatagggggtaggt----------ctaaaa 15523624  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  15523625 ctgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttttgttttaaaagg 15523723  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||| ||  ||||||||||||    
T  15523724 gcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaatt 15523774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 23494686 - 23494448
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||| | |||||||          |||||||    
T  23494686 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatatgaggtaggt----------ctaaaac 23494597  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||| | |||||  | ||||| || ||||||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||    
T  23494596 tgtcatttctctgcgtgtttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgctttgttctgttttaaaaggg 23494498  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||| |||||||||||||| ||||| ||||||||  |||| |||||||    
T  23494497 caggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatt 23494448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 54 - 281
Target Start/End: Original strand, 22434501 - 22434716
Alignment:
Q  54 gattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctg 152  Q
    |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||||||||||||||||||||| ||    
T  22434501 gattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaactgtcatttctctgcgtttttg 22434590  T
Q  153 gagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtag 252  Q
    |||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||    
T  22434591 gagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt-taaaatggcaggaccagtttcgtgagtag 22434687  T
Q  253 accaaatcacgaggattaaaagtgtaatt 281  Q
     ||||| ||||||||  |||| |||||||    
T  22434688 gccaaaacacgaggaccaaaaatgtaatt 22434716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 33109844 - 33109689
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  33109844 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 33109746  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| |||||||||||||||||||||  ||||| ||||||||  |||| |||||||    
T  33109745 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaatt 33109689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 125 - 281
Target Start/End: Original strand, 25447621 - 25447776
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    |||||||||| |||||||||||||| |||||  | ||||| |  |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |    
T  25447621 ctaaaactgtaatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 25447719  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||  ||||||||||||    
T  25447720 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatt 25447776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 51021041 - 51020802
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||| ||||| | |||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  51021041 ggttagtgtgttgaataaagtggattatttgtactcacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 51020952  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||| ||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||    
T  51020951 ctgtcatttctctacgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaagg 51020853  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||| |||| |   ||||| || |||||| ||||||||||||    
T  51020852 gcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaatt 51020802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 2118598 - 2118835
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    |||||||||||  ||| ||| |||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  2118598 gttagtgtgttgtataaaatggattctttgtacccacatgttttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 2118687  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    | | |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| |||| |||||||     
T  2118688 tattatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgttttaaaagga 2118785  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
     |||||||||||| |||| || ||||| ||||| ||  ||||||||||||    
T  2118786 taggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaatt 2118835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 33109883 - 33110004
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||||| || |||||     
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    || |||||  ||||||||||||    
T  33109983 catgaggaccaaaagtgtaatt 33110004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 54995369 - 54995607
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaa 130  Q
    ||||||||| || |||| | | |||||||||| |||||||| ||||||| ||||| |||||||||||||||||||| |||||||          ||||||    
T  54995369 ggttagtgtattaaataaagtggattctttgtacccacatgctttattccttgtttatttcatagttgagcataggtggtaggt----------ctaaaa 54995458  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    || |||||||| ||||||| | |||  | ||||| || | |||||||||||||||||||||| ||||| |||||||||| ||||||||| || |||||||    
T  54995459 ctatcatttctttgcgtttttagagaat-aaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggaccgttttgttctattttaaaagg 54995556  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| || ||||||||||||||| ||||| ||||||||  ||||||||||||    
T  54995557 gcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 54995607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 22170243 - 22170476
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||| ||||| ||      ||||||||||||||      ||    || |||||||    
T  22170243 ggttagtgtgttcaataaaatggattctttgtacccacatgttttattccttgtttatg-----gttgagcataggggg-----ta----cgtctaaaac 22170328  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| |||| ||||| ||    
T  22170329 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttgttttaaaaagg 22170427  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| || |||||| |||||  |||| ||||||||  ||||||||||||    
T  22170428 cagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaatt 22170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 48526355 - 48526201
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  48526355 ctaaaactgtcatttctctgcatttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 48526258  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||  |||||||| |||||||  |||| |||||| |  ||||||||||||    
T  48526257 aaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaatt 48526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 18763951 - 18764060
Alignment:
Q  172 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 271  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| || |||||||||||||||||| ||||| ||||||||  ||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  272 aagtgtaatt 281  Q
    ||||||||||    
T  18764051 aagtgtaatt 18764060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 48713777 - 48713886
Alignment:
Q  172 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 271  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||| |||| ||||||| | ||| |||||| |||||    
T  48713777 aggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaa 48713876  T
Q  272 aagtgtaatt 281  Q
    ||||||||||    
T  48713877 aagtgtaatt 48713886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 218
Target Start/End: Original strand, 12503737 - 12503913
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  12503737 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattctttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 12503826  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||||| |||||  | ||||| || |||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  12503827 ctgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 20958288 - 20958399
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 268  Q
    |||||||| |||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||| |||||||||||| |||||  |||||||     
T  20958288 ggtaggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggac 20958386  T
Q  269 taaaagtgtaatt 281  Q
    |||||||||||||    
T  20958387 taaaagtgtaatt 20958399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 45082590 - 45082437
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    |||||| ||||||||||||| |||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  45082590 ctaaaattgtcatttctctgtgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 45082493  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||  ||||| ||||||||||||||||| ||||| ||  ||||| ||||||    
T  45082492 aaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaatt 45082437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 43243708 - 43243806
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 267  Q
    |||||||| |||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||||| |||||||||||| ||||| ||||||||    
T  43243708 ggtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgagga 43243806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 17504217 - 17504061
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||| | |||||| ||||||| |||| |||||||||||||||| ||||| ||||||| |||||||||| |||||||||          ||||||    
T  17504217 ggttagtgtgctgaatagagtagattccttgtacccacatgttttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 17504128  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||    
T  17504127 ctgtcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 17504061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 16691062 - 16690941
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||  |||||||| |||| ||||  |||||||||| ||||||||||||| ||||     
T  16691062 aaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaa 16690963  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||| ||||  |||| |||||||    
T  16690962 cacaaggaccaaaaatgtaatt 16690941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 35363028 - 35363141
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt-aaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 267  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||| | || | ||||| |||| ||||||||||||||||| ||||| ||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  268 ttaaaagtgtaatt 281  Q
    | ||||||||||||    
T  35363128 tcaaaagtgtaatt 35363141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 10258304 - 10258427
Alignment:
Q  158 tgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaa 257  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||||||  || |||||  |||||| |||||||||||||||| |||| ||||||| |||     
T  10258304 tgaaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccac 10258403  T
Q  258 atcacgaggattaaaagtgtaatt 281  Q
    | ||||||||  ||||||||||||    
T  10258404 aacacgaggaccaaaagtgtaatt 10258427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 43281210 - 43281316
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || |||||||||||||||||||||||||| |||||||||| ||  |||||||||||| ||||| |||| ||||| |||||||||||| |||||     
T  43281210 aaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaa 43281308  T
Q  260 cacgagga 267  Q
    ||||||||    
T  43281309 cacgagga 43281316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 40160396 - 40160549
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaactgtcatttctct 143  Q
    |||||| ||||||  |||| |||||||||||||||| ||||| |||| || |||||||||| |||||  || |||||| |||||||||||   |||||||    
T  40160396 aatagagtagatttcttgtacccacatgttttattccttgtttatttaatggttgagcatagggggtgagtctaaaactgcctaaaactgcattttctct 40160495  T
Q  144 gcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
     ||||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  40160496 acgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgata 40160549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 16691491 - 16691611
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| ||||||| ||||||||||||||||||||| |||||| |||||| |||||||| |||| ||||  |||||||||| ||||||||||||  ||||     
T  16691491 aaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatgtt-taaagaggcaggaccattttcgtgagtaggtcaaaa 16691589  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    |||  |||| ||||||||||||    
T  16691590 cacagggatcaaaagtgtaatt 16691611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 44892576 - 44892674
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 267  Q
    |||||||||||||||||||||||||  ||||||||| |||  |||||||||||| ||||| ||||| |||| ||||||||||||  |||| ||||||||    
T  44892576 ggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgagga 44892674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 48294961 - 48295083
Alignment:
Q  160 aaaataggaggtaggacg-aaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaa 258  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||| ||||  |||| ||||| ||||||||||||| ||||    
T  48294961 aaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaa 48295060  T
Q  259 tcacgaggattaaaagtgtaatt 281  Q
     ||||| ||  |||| |||||||    
T  48295061 acacgatgaccaaaaatgtaatt 48295083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 35193610 - 35193744
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaactgtcatttctct 143  Q
    |||||| ||||||| |||| ||||||||||| |||| ||||| ||||||| ||||||||||| |||||||| |  ||| || |||||||| || ||||||    
T  35193610 aatagagtagattccttgtacccacatgttt-attctttgtttatttcatcgttgagcatagagggtaggtctgtaactgcttaaaactgcca-ttctct 35193707  T
Q  144 gcgtttctggagtttgaaaataggaggtaggacgaaaa 181  Q
    |||||||||||| |||||||||||||||| ||| ||||    
T  35193708 gcgtttctggag-ttgaaaataggaggtatgactaaaa 35193744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 48293708 - 48293599
Alignment:
Q  172 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 271  Q
    |||| ||||||||||||||||||||||||||||| || |||||||| |||| ||||  | ||||| || |||||||||||  ||||| ||||||||  ||    
T  48293708 aggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttcgtgagtaagccaaaacacgaggaccaa 48293609  T
Q  272 aagtgtaatt 281  Q
    ||||||||||    
T  48293608 aagtgtaatt 48293599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 43242396 - 43242328
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaa 228  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||    
T  43242396 aaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 54440871 - 54440946
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||| | ||||||| |||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  54440871 ggttagtgtgttgaataaagtagattccttgtacccacatgttttattctttgtttatttcatagttgagcatagg 54440946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 20957301 - 20957224
Alignment:
Q  174 gacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagta 251  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||| |||||| | | ||||| |||||||||||    
T  20957301 gacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtgagta 20957224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 35193523 - 35193406
Alignment:
Q  60 ttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagttt 158  Q
    |||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||||          |||||||||||||||||||||||||||| || ||    
T  35193523 ttgtacccacatgttttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaactgtcatttctctgcgtttctgaag-tt 35193435  T
Q  159 gaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||| |||||| |||| |||||    
T  35193434 gaaaataggagataggactaaaactgcaa 35193406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 48708401 - 48708300
Alignment:
Q  180 aaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaa 279  Q
    |||||||||||||||||||||||||||||  ||||||| |||| ||||||||||||| || |||||||  ||| ||||| |||  |||  ||||||||||    
T  48708401 aaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaa 48708302  T
Q  280 tt 281  Q
    ||    
T  48708301 tt 48708300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 187
Target Start/End: Original strand, 17504283 - 17504407
Alignment:
Q  54 gattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctg 152  Q
    ||||| |||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          |||||||||||||||||||||||||||     
T  17504283 gattccttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaactgtcatttctctgcgtttcta 17504372  T
Q  153 gagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    |||||  |||||||||||||| || |||| |||||    
T  17504373 gagttgaaaaataggaggtagtactaaaattgcaa 17504407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 10795650 - 10795730
Alignment:
Q  65 cccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||||||| ||||||  ||||| |||||||  ||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  10795650 cccacatgctttattatttgtttatttcatgcttgagcatagggggtaggtctaaaactgcctaaaactgtcatttctctg 10795730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 14440130 - 14440205
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  14440130 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 14440205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 35643811 - 35643736
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  35643811 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 35643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 18751903 - 18751993
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaac 121  Q
    |||||||||||| |||| | |  ||||||||| |||||||| ||||||| ||||| ||||||| |||||||||| ||||||||| ||||||    
T  18751903 ggttagtgtgttgaataaagtgaattctttgtacccacatgctttattctttgtttatttcatggttgagcatagggggtaggtctaaaac 18751993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 40160337 - 40160247
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaac 121  Q
    |||||||||||| |||| | | ||||| |||| | |||||||| ||||| ||||| |||||||||||||||||| ||||||||| ||||||    
T  40160337 ggttagtgtgttaaataaagtggattccttgtactcacatgttgtattcgttgtttatttcatagttgagcatagggggtaggtctaaaac 40160247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 16318251 - 16318316
Alignment:
Q  216 ttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||| ||||||||||||| |||||| |||||||| ||||| ||||||||  ||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaatt 16318316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 44220805 - 44220858
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 222  Q
    ||||| |||||||||| |||||||||||||| |||||||| |||||||||||||    
T  44220805 ggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtt 44220858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 44890643 - 44890522
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || |||| || |||||||||||||||||  |||||| |||||   |||||||||||| |||||||||| ||||| |||||||| |||  ||||     
T  44890643 aaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaa 44890544  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||| ||||  |||| |||||||    
T  44890543 cacaaggaccaaaattgtaatt 44890522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 28465305 - 28465250
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  28465305 tagattccttgtacccacatgttttattccttgtttatttcatggttgagcatagg 28465250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 28465383 - 28465458
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| ||||  ||||||||||||||| ||||| ||||||| ||||||||||||    
T  28465383 ggttagtgtgctgaataaagtagattccttgtatccacatgttttattctttgtttatttcatggttgagcatagg 28465458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 34789626 - 34789551
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||  |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  34789626 ggttagtgtgctgaataaagtagatttcttgtacccacatgttttattctttgtttatttcatggttgagcatagg 34789551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 34789704 - 34789759
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  34789704 tagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 34789759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 34807443 - 34807514
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||    
T  34807443 ttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcata 34807514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 46736957 - 46737032
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||| ||||||||    
T  46736957 ggttagtgtgctaaataaagtagattccttgtacccacatgttttattctttgtttatttcatggtttagcatagg 46737032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 229403 - 229330
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||| | |||| | |||||||||||| | |||||||||||||| || || ||||||| ||||||||||||    
T  229403 ttagtgtgctgaataaagtagattctttgtactcacatgttttattccttatttatttcatggttgagcatagg 229330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 26974528 - 26974407
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||| | ||||||  |||| |||||||||||||||| ||||| |||| || ||||||||||   || |||| ||      |||||||    
T  26974528 ggttagtgtgctgaataaagtagatttcttgtacccacatgttttattctttgtttattttatggttgagcata---gttggttgaa------ctaaaac 26974438  T
Q  132 tgtcatttctctgcgtttctggagtttgaaa 162  Q
    |||||||||| ||||||||||||||| ||||    
T  26974437 tgtcatttctgtgcgtttctggagttggaaa 26974407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 45838869 - 45838922
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||||| |||||||||||||||| ||||| ||||||| | ||||||||    
T  45838869 tagattctttgtacccacatgttttattctttgtttatttcatggctgagcata 45838922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 21034558 - 21034613
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  21034558 tagattccttgtacccacatgatttattccttgttcatttcatggttgagcatagg 21034613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 33777866 - 33777791
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | || |||| |||| |||||||||||||||| ||||| ||||||| ||||| ||||||    
T  33777866 ggttagtgtgctgaataaagtaaattccttgtacccacatgttttattccttgtttatttcatggttgaacatagg 33777791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 45838771 - 45838716
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| || ||||| ||||||| ||||| ||||||| ||||||||||||    
T  45838771 tagattctttgtacctacatgatttattccttgtttatttcatggttgagcatagg 45838716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 54440793 - 54440738
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  54440793 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 54440738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 55189636 - 55189581
Alignment:
Q  178 aaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggca 233  Q
    ||||||| | ||||||||||||||||| ||| |||||||||| || ||||||||||    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggca 55189581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 55677279 - 55677334
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||| ||||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  55677279 tagattttttgtacccacatgatttattccttgtttatttcatggttgagcatagg 55677334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 12593184 - 12593143
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 167  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  12593184 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 12593143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 14439988 - 14439926
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  14439988 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 14439926  T

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Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 18965300 - 18965208
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaat-aggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||| | ||||||||| ||| |||||||| ||||||||| || |||| ||||| ||| |||||| || |||||| |||||||||    
T  18965300 ctaaaactgtcatttatatgcgtttctagag-ttgaaaataaggaggtagaactaaaactgcaa-aaacatgatagtttaaggacgattttgttc 18965208  T

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Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 46736815 - 46736774
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 167  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  46736815 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 46736774  T

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Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 229545 - 229636
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaat-aggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgtt 217  Q
    |||||| ||||| |||| ||||||||||||| |||||||| |||||||||||  |||| ||||| ||| |||||| || |||||| ||||||||    
T  229545 ctaaaattgtcacttctgtgcgtttctggag-ttgaaaataaggaggtaggattaaaactgcaa-aaacatgatagtttaaggacgattttgtt 229636  T

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Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 18965367 - 18965306
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    |||| ||||||||| |||| |||||||| ||||||| || || ||||||| |||||||||||    
T  18965367 aataaaatagattccttgtacccacatgctttattccttatttatttcatggttgagcatag 18965306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 28166222 - 28166173
Alignment:
Q  58 ctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||| |||| ||||||||||| ||||| ||||||| ||||||||||||    
T  28166222 ctttgtacccatatgttttattctttgtttatttcatggttgagcatagg 28166173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 34789542 - 34789450
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    |||||| |||||||| | ||||||||||||||||||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  34789542 ctaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 34789450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 45838933 - 45838970
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  45838933 ctaaaactgtcatttctgtgcgtttctggagttggaaa 45838970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 16214832 - 16214872
Alignment:
Q  67 cacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||||| ||||| ||||||| ||||||||||||    
T  16214832 cacatgttttattctttgtttatttcatggttgagcatagg 16214872  T

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Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 41608596 - 41608544
Alignment:
Q  55 attctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  41608596 attccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 41608544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 157
Target Start/End: Original strand, 46737041 - 46737073
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtt 157  Q
    ||||||||||||||||| |||||||||||||||    
T  46737041 ctaaaactgtcatttctgtgcgtttctggagtt 46737073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 18451115 - 18450835
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||    
T  18451115 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatagaatagattctttgtgcccacatgttttattccttgttgatttcgtggttga 18451016  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  18451015 gcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataat 18450916  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  18450915 tgaaggaccgttttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 18450835  T

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Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 43058593 - 43058872
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||| ||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
T  43058593 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatataatagatttattgtgcccacatgttttattccttgttgatttcatggttga 43058692  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43058693 gcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataat 43058791  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  43058792 tgaaggaccattttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaatt 43058872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 40815630 - 40815350
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||||||        |||| |||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  40815630 tctaagatatgtttcaaattaggatttttttagttactgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttga 40815531  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40815530 gcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 40815431  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| ||| ||||||| |||| |||||||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  40815430 tgaagaaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 40815350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 22374617 - 22374865
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  22374617 gttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggaaggtctaaaaccgcctaaaact 22374716  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  22374717 gtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 22374816  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||||| |||||||||||| ||||| ||||||||  ||||||||||||    
T  22374817 aagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 22374865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 7446638 - 7446886
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||| | |||||| |||||||||||||||||    
T  7446638 gttagtgtgctgaataaaatagattccttgtgcccacatgttttattccttgttgatttcatggttaagcatatgagtaggtctaaaaccgcctaaaact 7446737  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  7446738 gtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 7446837  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||   |||| ||||||||| |||| |||||||    
T  7446838 aggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaatt 7446886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 40027400 - 40027680
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||         ||||||||| | |||||||||||||| |||| |||||||||||||||| ||||||||||||| |||||    
T  40027400 tctaagatatgtttcaaattagggttttttttgttagtgtgctgaatagaatagattccttgtacccacatgttttattccttgttgatttcatggttga 40027499  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
     |||| |||||||| |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40027500 acatatgggtaggtctaaaaccgcctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 40027599  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||| |||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||  ||||||||||||    
T  40027600 tgaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 40027680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 34 - 279
Target Start/End: Original strand, 239645 - 239890
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactg 133  Q
    |||||||| | |||| |||||||| |||||||||||||||||||||  ||||||||||||| ||||||||||| | ||||| ||||||||||||||||||    
T  239645 ttagtgtgctgaatataatagattatttgtgcccacatgttttattttttgttgatttcatggttgagcatagagttaggtctaaaaccgcctaaaactg 239744  T
Q  134 tcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggca 233  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  239745 ccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggca 239844  T
Q  234 ggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaa 279  Q
    |||||| |||||||||||| ||||| ||||||||  ||||||||||    
T  239845 ggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaa 239890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 45 - 281
Target Start/End: Original strand, 28616918 - 28617154
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    ||||||||| ||||| | |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||  |||||||||    
T  28616918 aatagaataaattctctctgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaatcgcctaaaactgctatttctctg 28617017  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttc 244  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  28617018 cgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggacagaaccagtttc 28617117  T
Q  245 gtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| ||||| ||||||||  ||||||||||||    
T  28617118 gtgagtaggccaaaacacgaggaccaaaagtgtaatt 28617154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 11090811 - 11091060
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||| ||||||||| ||||||||||||||||||||| || |||||||||| |||||||||| |||||||| |||||||||||||||     
T  11090811 ggttagtgtgctgaatataatagattccttgtgcccacatgttttattccttattgatttcatggttgagcatatgggtaggtctaaaaccgcctaaaat 11090910  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |||||||||||| ||||||||    
T  11090911 tgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgttttaaaaggg 11091010  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  11091011 catgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 11091060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 3025724 - 3025988
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||    
T  3025724 tctaagatatgtttcaaattagg-tttttttggttagtgtgctgaatagaatagattccttgtgcccaaatgttttattctttgttgatttcatggttga 3025822  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||| |||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3025823 gcatatgggtaggtctaaacccgcttaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataat 3025922  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 267  Q
    ||||||||| ||||||| |||| ||||||||||| |||| |||||||||||  ||||| ||||||||    
T  3025923 tgaaggaccgttttgtt-tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgagga 3025988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 1978400 - 1978649
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||| ||||| | |||| ||||||||| ||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  1978400 ggttggtgtgctgaatataatagattccttgtgcccacatgttttattccttgttaatttcatggttgagcatagaggtaggtctaaaaccgcataaaac 1978499  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    || ||||||| || |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  1978500 tgccatttctttgtgtttctagagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaaggg 1978599  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| |||||||||||| ||||| ||| ||||  ||||||||||||    
T  1978600 caggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaatt 1978649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 14432402 - 14432681
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||| |        ||||| |||| | ||||||||||||||   ||||||||||||||||||| ||||||||||||| |||||    
T  14432402 tctaagatatgtttcaaattacggttttttgggttaatgtgctgaatagaatagattcca-gtgcccacatgttttattccttgttgatttcatggttga 14432500  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||| |||||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  14432501 gcataagggtaggtctaaattcgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataat 14432600  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| |||||||| ||||||| ||||| |||| |||||||||| ||||||| ||||| ||||||||  |||| |||||||    
T  14432601 tgaagaaccattttattctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaatt 14432681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 8425607 - 8425360
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttatt-cattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||| |  ||||||||||||| |||| ||||||||||||||| | ||||||||||||| ||||| ||||||| ||||| ||||||||| ||||||    
T  8425607 gttagtgtgctggatagaatagattccttgtacccacatgttttatttccttgttgatttcatggttgaacataggg-taggtctaaaaccgcttaaaac 8425509  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||| ||    
T  8425508 tgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-gaccgttttgttctgttttaaaaagg 8425410  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
     | ||||| |||||||||||| ||||| ||| ||||  ||||||||||||    
T  8425409 taagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaatt 8425360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 55 - 281
Target Start/End: Original strand, 26538403 - 26538619
Alignment:
Q  55 attctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctgga 154  Q
    ||||||||| |||||||| ||||||| ||||| ||||||| ||||| |||||||||||||          |||||||||||||||||||||||||||||     
T  26538403 attctttgtacccacatgctttattccttgtttatttcatggttgaacataggggtaggt----------ctaaaactgtcatttctctgcgtttctggg 26538492  T
Q  155 gtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagac 254  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| |    
T  26538493 gtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaagagggcaggaccagtttcgtgagtaggc 26538592  T
Q  255 caaatcacgaggattaaaagtgtaatt 281  Q
    |||| ||||||||  ||||||||||||    
T  26538593 caaaacacgaggaccaaaagtgtaatt 26538619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 239596 - 239358
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||| | |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  239596 ggttagtgtggtgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggataggt----------ctaaaa 239507  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |    
T  239506 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaa-g 239409  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||| ||  ||||||||||||    
T  239408 gcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatt 239358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 1978352 - 1978113
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||||||||||| ||||| ||||||| |||||||||| |||||||||          ||||||    
T  1978352 ggttagtgtgttgaataaagtggattctttgtacccacatgttttattccttgtttatttcatggttgagcatatggggtaggt----------ctaaaa 1978263  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |  ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  1978262 ctgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 1978164  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||| ||||  |||| |||||||    
T  1978163 gcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaatt 1978113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 22374564 - 22374325
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggt-aggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | |  ||||||||| |||||||| ||||||| ||||| ||||||||||||||||||| ||| ||||          ||||||    
T  22374564 ggttagtgtgttgaataaagtgaattctttgtacccacatgctttattccttgtttatttcatagttgagcatagaggttaggt----------ctaaaa 22374475  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    || |||||||| ||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  22374474 ctatcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 22374376  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  22374375 gcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 22374325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 40815646 - 40815885
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||| ||||| |||||||| ||||||| ||||| ||||||| ||||||||||| ||||||||          ||||||    
T  40815646 ggttagtgtgttgaataaagtggattatttgtacccacatgctttattccttgtttatttcatggttgagcatagagggtaggt----------ctaaaa 40815735  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||    
T  40815736 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggccgttttgttctgttttaaaagg 40815834  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||  ||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  40815835 gcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 40815885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 11090764 - 11090526
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||| | ||||| || ||||||| ||||| ||||||| ||||| |||||||| |||||          |||||||    
T  11090764 gttagtgtgttgaataaagtggattctttatacccacgtgctttattccttgtttatttcatggttgaacatagggggtaggt----------ctaaaac 11090675  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  11090674 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 11090576  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||| |||||||||||||| ||||| ||||||||  ||||||||||||    
T  11090575 caggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 11090526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 40027384 - 40027145
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||| ||||| ||||| |||||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  40027384 ggttagtgtgttgaataaagtggattatttgtacccacgtgttttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 40027295  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| |  |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  40027294 ctgtcatttctctgcgtttttggagaat-aaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 40027196  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||||||||||| ||||| ||||| ||  ||||||||||||    
T  40027195 gcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatt 40027145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 18451133 - 18451371
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| || || ||||||| ||| |||||||||| |||||          |||||||    
T  18451133 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttatttatttcatggttaagcatagggggtaggt----------ctaaaac 18451222  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  18451223 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggactattttgttctgttttaaaaggg 18451321  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||| ||||| ||||| ||||||||  ||||||||||||    
T  18451322 caggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaatt 18451371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 43058575 - 43058338
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaact 132  Q
    |||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| |||||||  ||||||||||||| |||||          ||||||||    
T  43058575 ttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatgattgagcatagggggtaggt----------ctaaaact 43058486  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||| ||||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||    
T  43058485 gtcatttctctacgtttttggagaat-aaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggc 43058387  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||| |||||| | ||||| ||||||||| ||||||||||||    
T  43058386 aggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaatt 43058338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 54 - 281
Target Start/End: Complemental strand, 7446567 - 7446347
Alignment:
Q  54 gattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctg 152  Q
    |||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||||| || || |||||        ||||||||||||||||||||| ||    
T  7446567 gattctttgtacccacatgttttattccttgtttatttcatggttgaacatagggggtatgtctaaaatt------aactgtcatttctctgcgtttttg 7446474  T
Q  153 gagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtag 252  Q
    |||  | ||||| || |||| |||||||||||||| |||||||||||||||| |||| |||||||||||| |||||||||||||||| |||| |||||||    
T  7446473 gagaat-aaaatggg-ggtatgacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccaatttcatgagtag 7446376  T
Q  253 accaaatcacgaggattaaaagtgtaatt 281  Q
    |||||| ||||||||| ||||||||||||    
T  7446375 accaaaacacgaggatcaaaagtgtaatt 7446347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 281
Target Start/End: Original strand, 8425684 - 8425900
Alignment:
Q  54 gattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctgg 153  Q
    |||||||||| |||||||| ||||||| ||||| ||||||| ||| | |||||||||||||          ||||||||||||||||||||||||| |||    
T  8425684 gattctttgtacccacatgctttattccttgtttatttcatggttaatcataggggtaggt----------ctaaaactgtcatttctctgcgtttttgg 8425773  T
Q  154 agtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtaga 253  Q
    ||  | ||||| || |||| |||||||||||||||||||||||||||||||||||  ||||||||| || |||||||||||||||| |||||||||||||    
T  8425774 agaat-aaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgttctattttaaaagggcaggaccaatttcgtgagtaga 8425872  T
Q  254 ccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| ||| || |  ||||||||||||    
T  8425873 ccaaaacacaagaaccaaaagtgtaatt 8425900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 28616856 - 28616618
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaact 132  Q
    |||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||| |||||||| |||||          ||||||||    
T  28616856 ttagtgtgttgaataaagtggattctttgtacccacatgctttattctttgtttatttcatggttgaacatagggggtaggt----------ctaaaact 28616767  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    |  |||||||||||||| | |  |   ||||| || ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  28616766 gctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 28616667  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  28616666 aagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 28616618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 280
Target Start/End: Complemental strand, 3025708 - 3025472
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| ||| |||| ||||||| || || ||||||| |||||||||||||| |||||          |||||||    
T  3025708 gttagtgtgttgaataaagtggattctttgtacccgcatgctttattccttatttatttcatggttgagcatagggggtaggt----------ctaaaac 3025619  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||| ||||||| | |||  | ||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |    
T  3025618 tgtcatttctttgcgttttttgagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagag 3025521  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaat 280  Q
    ||||||||||||||||||||| ||||| ||||||||  |||| ||||||    
T  3025520 caggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 26538257 - 26538102
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    |||||||||| ||||||||| |||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  26538257 ctaaaactgttatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgctttgttctgtttt 26538159  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||| ||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  26538158 aaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaatt 26538102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 28847122 - 28847235
Alignment:
Q  168 aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 267  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  28847122 aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgagga 28847221  T
Q  268 ttaaaagtgtaatt 281  Q
      |||| |||||||    
T  28847222 ccaaaaatgtaatt 28847235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 14432302 - 14432147
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||| |||||||||| ||||||| | || |    
T  14432302 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgttttgttatatttt 14432204  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||| ||||||| ||||| ||||||||  ||||||||||||    
T  14432203 aaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaatt 14432147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 20444875 - 20444754
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| | |||||     
T  20444875 aaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaa 20444776  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  ||||||||||||    
T  20444775 cacgaggaccaaaagtgtaatt 20444754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 35781093 - 35781203
Alignment:
Q  171 taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggatta 270  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||| ||||| |||||||||||| ||||| ||||||||| |    
T  35781093 taggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatca 35781192  T
Q  271 aaagtgtaatt 281  Q
    |||||||||||    
T  35781193 aaagtgtaatt 35781203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 20440461 - 20440571
Alignment:
Q  171 taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggatta 270  Q
    ||||||||||| ||||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||||  |    
T  20440461 taggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggacca 20440560  T
Q  271 aaagtgtaatt 281  Q
    |||||||||||    
T  20440561 aaagtgtaatt 20440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 35779834 - 35779713
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||   ||||     
T  35779834 aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaa 35779735  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  ||||||||||||    
T  35779734 cacgaggaccaaaagtgtaatt 35779713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 8972363 - 8972242
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||| ||||| ||||||||| |  |||||     
T  8972363 aaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaa 8972264  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  ||||||||||||    
T  8972263 cacgaggaccaaaagtgtaatt 8972242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 15551612 - 15551504
Alignment:
Q  173 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaa 272  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||| |||| ||||| |||| ||||| ||||||||||| |||||| ||||||||  |||    
T  15551612 ggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaa 15551513  T
Q  273 agtgtaatt 281  Q
    |||||||||    
T  15551512 agtgtaatt 15551504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 249
Target Start/End: Original strand, 28143333 - 28143538
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||| | |||| | | ||||| |||| |||||||| ||||||||||||| ||||||| |||||||||||||| |||||          |||||||    
T  28143333 gttagtgtgctgaataaagtggattccttgtacccacatgctttattcattgtttatttcatggttgagcatagggggtaggt----------ctaaaac 28143422  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||| ||| |||||| || | |||| |||||||||  ||  |||  ||    
T  28143423 tgtcatttctctgcgtttctggag-ttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacgattttgttcgatttgaaagagg 28143520  T
Q  232 caggaccagtttcgtgag 249  Q
    |||||||| |||||||||    
T  28143521 caggaccattttcgtgag 28143538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 15552482 - 15552570
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaa 258  Q
    ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| || |||||||||||| |||||    
T  15552482 ggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaa 15552570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 31797166 - 31797225
Alignment:
Q  127 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||    
T  31797166 aaaactgtcatttctctgcgtttctagag-ttgaaaataggaggtaggactaaaactgcaa 31797225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 4809181 - 4809256
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  4809181 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 4809256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 11539862 - 11539807
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  11539862 tagattccttgtacccacatgttttattcattgtttatttcatggttgagcatagg 11539807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 38008253 - 38008328
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  38008253 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 38008328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 250
Target Start/End: Complemental strand, 63201 - 62993
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||| | ||||||  |||| |||||||||||||||| ||||| ||||||| ||||||||||||    ||||       | |||||||    
T  63201 ggttagtgtgctgaataaagtagatttcttgtacccacatgttttattccttgtttatttcatggttgagcatagg---tggtt------ggactaaaac 63111  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||| | ||||||||| ||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||  || ||||| ||    
T  63110 tgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattttaaaaagg 63012  T
Q  232 caggaccagtttcgtgagt 250  Q
     ||||||| ||||||||||    
T  63011 taggaccattttcgtgagt 62993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 15550976 - 15551049
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||    
T  15550976 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcata 15551049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 44219804 - 44219712
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || |||||| |||||| |||||||||    
T  44219804 ctaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacat-ataatttaaggacaattttgttc 44219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 6949696 - 6949628
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||| | |||| | |||||||||||| |||||||||||||||| ||||| ||||||| |||||    
T  6949696 ggttagtgtgctgaataaagtagattctttgtacccacatgttttattctttgtttatttcatggttga 6949628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 14942230 - 14942324
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa--atgataattgaaggaccattttgttc 218  Q
    |||||||||  |||||||||| ||||||||| |||||||||||| ||||||| |||| ||||| ||||  ||||||||| | |||| |||||||||    
T  14942230 ctaaaactgcgatttctctgcatttctggag-ttgaaaataggatgtaggactaaaactgcaaaaaaaacatgataatttatggacaattttgttc 14942324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 13315741 - 13315666
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| ||||| |||||||||| ||||| ||||||| ||||||||||||    
T  13315741 ggttagtgtgctgaataaagtagattccttgtacccacgtgttttattctttgtttatttcatggttgagcatagg 13315666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 13399722 - 13399797
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| ||||  ||||||||||||||| ||||| ||||||| ||||||||||||    
T  13399722 ggttagtgtgctgaataaagtagattccttgtatccacatgttttattctttgtttatttcatggttgagcatagg 13399797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 43215952 - 43215878
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||| | |||| | |||||||||||| ||| |||||||||||| ||||| ||||||| ||||| ||||||    
T  43215952 gttagtgtgctgaataaagtagattctttgtacccgcatgttttattctttgtttatttcatggttgaacatagg 43215878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 42192484 - 42192411
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||||| |||| | ||||||| |||| |||||||| ||||||| ||||| |||||||  |||||||||    
T  42192484 ggttagtgtgttgaataaagtagattccttgtacccacatgctttattccttgtttatttcatgattgagcata 42192411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 44219886 - 44219813
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| | ||||| ||||||||||||    
T  44219886 ttagtgtgctgaataaagtagattccttgtacccacatgttttattccttgtttacttcatggttgagcatagg 44219813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 38008172 - 38008120
Alignment:
Q  55 attctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  38008172 attctttgtacccacatgatttattccttgtttatttcatggttgagcatagg 38008120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 649750 - 649695
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  649750 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 649695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 4356078 - 4356133
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| |||||||  |||||||||||    
T  4356078 tagattccttgtacccacatgttttattctttgtttatttcatgcttgagcatagg 4356133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 6949774 - 6949829
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  6949774 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 6949829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 11539960 - 11540015
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  11539960 tagattccttgtacccacatgatttattccttgtttatttcattgttgagcatagg 11540015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 16175671 - 16175726
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  16175671 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 16175726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 20127981 - 20127906
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| || | |||||||||||||||| ||||| ||||||| |||||| |||||    
T  20127981 ggttagtgtgctgaataaagtagattccttctacccacatgttttattctttgtttatttcatggttgagtatagg 20127906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 20128059 - 20128114
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  20128059 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 20128114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 32418381 - 32418326
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| | |||||| ||||||||||||| ||||||| ||||||||||||    
T  32418381 tagattccttgtactcacatgatttattcattgtttatttcatggttgagcatagg 32418326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 32418459 - 32418534
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||| | ||||||| || | |||| ||||||||||| ||||| ||||||| ||||| ||||||    
T  32418459 ggttagtgtgttgaataaagtagattccttatacccatatgttttattctttgtttatttcatggttgaacatagg 32418534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 33920772 - 33920710
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||| |||||| |||| |||||    
T  33920772 ctaaaactgtcatttctatgcgtttctggag-ttgaaaatagggagataggactaaaactgcaa 33920710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 33920914 - 33920988
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||  ||||||||||||    
T  33920914 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttca-ggttgagcatagg 33920988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 4809102 - 4809048
Alignment:
Q  53 agattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  4809102 agattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 4809048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 5560936 - 5560998
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  5560936 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 5560998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 13399582 - 13399520
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  13399582 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 13399520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 15550834 - 15550793
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 167  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  15550834 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 15550793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 20128123 - 20128247
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||| || | |    
T  20128123 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgtt-tgattt 20128220  T
Q  225 aaaag-ggcaggaccagtttcgtgagt 250  Q
    ||||| || ||||||| ||||||||||    
T  20128221 aaaagaggtaggaccaatttcgtgagt 20128247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 43160397 - 43160463
Alignment:
Q  126 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 192  Q
    |||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaa 43160463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 4356142 - 4356179
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  4356142 ctaaaactgtcatttctgtgcgtttctggagttggaaa 4356179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 4809039 - 4809002
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  4809039 ctaaaactgtcatttctgtgcgtttctggagttggaaa 4809002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 6949612 - 6949519
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  6949612 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgattttgttc 6949519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 9330124 - 9330051
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||| | |||| | ||||||| |||| | | |||||||||||| ||||| ||||||| ||||||||||    
T  9330124 ggttagtgtgctgaataaagtagattccttgtactcgcatgttttattctttgtttatttcatggttgagcata 9330051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 11539798 - 11539705
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  11539798 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 11539705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 11540024 - 11540061
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  11540024 ctaaaactgtcatttctgtgcgtttctggagttggaaa 11540061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 16175735 - 16175828
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  16175735 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 16175828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 42192628 - 42192665
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  42192628 ctaaaactgtcatttctgtgcgtttctggagttggaaa 42192665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 43160170 - 43160103
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaa 192  Q
    ||||||||||||||| | ||||||||||||| ||||||||| |||| |||||| |||| ||||| ||||    
T  43160170 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagggagataggactaaaactgcaaaaaaa 43160103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 22219644 - 22219893
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  22219644 ggttagtgtgctgaatagaatagattccttgtgcccacatgttttattcaatgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaac 22219743  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  22219744 tgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 22219843  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  22219844 caggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 22219893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 11445247 - 11445527
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | || ||||||||||| ||||||||||||||||||||| |||||||||||||  ||||    
T  11445247 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaacagaatagattccttgtgcccacatgttttattccttgttgatttcatgattga 11445346  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11445347 gcataggggtgggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 11445446  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  11445447 tgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 11445527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 20741361 - 20741644
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  20741361 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatagttga 20741460  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgc---aacaaaaatgat 197  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||||||    
T  20741461 gcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgat 20741560  T
Q  198 aattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||  || |||||||||    
T  20741561 aattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaatt 20741644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 12935442 - 12935162
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||         |||||| || | |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
T  12935442 tctaagatatgtttcaaattagggttttttttgttagtatgctgaatagaatagatttgttgtgcccacatgttttattccttgttgatttcatggttga 12935343  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935342 gcataggggtatatctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 12935243  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  12935242 tgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 12935162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 18505204 - 18504924
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||||||       |||| ||||| | |||||||||||||| || | |||||||||||||||| ||||||||||||| |||||    
T  18505204 tctaagatatgtttcaaattaggatttttttggttggtgtgctgaatagaatagattccttattcccacatgttttattccttgttgatttcatggttga 18505105  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||| |||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  18505104 gcataggggtaggtctaaaatcgcctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataat 18505005  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| ||| |||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  18505004 tgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 18504924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 45 - 281
Target Start/End: Complemental strand, 31470556 - 31470320
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||||||||||||| |||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  31470556 aatagaatagattccttgtgcccacatgttttattccatgttgatttcatggttgagcataggggtaggtctaaaatcgcctaaaactgccatttctctg 31470457  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttc 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||||||||||| |||||| ||| ||||||||||    
T  31470456 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgttttaaaagagcatgaccagtttc 31470357  T
Q  245 gtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| ||||| ||||||||| ||||||||||||    
T  31470356 gtgagtaggccaaaacacgaggatcaaaagtgtaatt 31470320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 10900182 - 10899944
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||          ||||||||    
T  10900182 gttagtgtgctgaatagaatagatttcttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggt----------ctaaaact 10900093  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  10900092 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 10899993  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||| ||||| ||||| ||  ||||||||||||    
T  10899992 aggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatt 10899944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 11276865 - 11276595
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  11276865 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatagaatagattctttgtgcccacatgttttattccttgttgatttcatggttga 11276766  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  11276765 gcataggggtagg----------cctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaat 11276676  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| ||||||||||||| |||| ||| |||| ||||||||    
T  11276675 tgaaggaccattttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaatt 11276595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 18257397 - 18257677
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||| |        |||||||||| | |||||||||||||| ||||| ||||||||||||||  ||||||||||||| |||||    
T  18257397 tctaagatatgtttcaaattaaggtttttttggttagtgtgctgaatagaatagattcattgtgtccacatgttttattgcttgttgatttcatggttga 18257496  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||| ||||||| |||||||||||||||||| ||||||||| |||||    
T  18257497 gcataggggtaggtctaaaaccgcctaaaactgtcatttctctacgtgtatggagttggaaaatatgaggtaggacgaaaaatgtaacaaaaataataat 18257596  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||  |||||| |||||    
T  18257597 tgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataatt 18257677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 50 - 281
Target Start/End: Original strand, 23075437 - 23075668
Alignment:
Q  50 aatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgttt 149  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||||||| |||    
T  23075437 aatagatttattgtgcccacatgttttattccttgttgatttcatggttgagcataagggtaggtctaaaactgcctaaaactgtcatttctctgcattt 23075536  T
Q  150 ctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgag 249  Q
     |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  23075537 ttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgag 23075636  T
Q  250 tagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| ||||| ||||||||  ||||||||||||    
T  23075637 taggccaaaacacgaggaccaaaagtgtaatt 23075668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 51 - 281
Target Start/End: Complemental strand, 2319906 - 2319677
Alignment:
Q  51 atagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttc 150  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2319906 atagattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaactatcatttctctgcgtttc 2319807  T
Q  151 tggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagt 250  Q
    |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  2319806 tggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagt 2319708  T
Q  251 agaccaaatcacgaggattaaaagtgtaatt 281  Q
    || ||||| ||||||||  |||| |||||||    
T  2319707 aggccaaaacacgaggaccaaaaatgtaatt 2319677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 4811549 - 4811796
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||  ||||||| |    
T  4811549 gttagtgtgttgaatagaatggattccttgtgcccacatgttttattcattgttgatttcatggttgagcataggggtaggtctaaaactacctaaaatt 4811648  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    | ||||| ||||||||| ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |||||  ||    
T  4811649 gccattt-tctgcgtttatggggtttgaaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgc 4811747  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | || ||||||| ||||||| ||||| ||||||||| |||||| |||||    
T  4811748 atgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataatt 4811796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 15827925 - 15827643
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||| ||||||||| ||||||||||||||||||||| | ||||||||||| |||||    
T  15827925 tctaagatatgtttcaaattagggttttcttggttagtgtgatgaatataatagattcattgtgcccacatgttttattcctggttgatttcatggttga 15827826  T
Q  101 gcata-ggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 199  Q
     |||| |||||| || ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15827825 acatatggggtaagtctaaaaccgcctaaaa-tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatag 15827727  T
Q  200 ttgaaggacc--attttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||  | |||||| |||| ||||||| ||| ||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  15827726 ttgaaggaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaatt 15827643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 10900231 - 10900470
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  10900231 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 10900320  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10900321 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 10900419  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||||||||||| |||||  |||||||  ||||||||||||    
T  10900420 gcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaatt 10900470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 18257381 - 18257142
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| ||| ||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||| ||||||||          ||||||    
T  18257381 ggttagtgtgttgaataaaatggattcattgtacccacatgctttattccttgttaatttcatggttgagcatagagggtaggt----------ctaaaa 18257292  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  18257291 ctgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 18257193  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  18257192 gcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaatt 18257142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 20741343 - 20741105
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| | | |||||||||| |||||          |||||||    
T  20741343 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggctaagcatagggggtaggt----------ctaaaac 20741254  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  20741253 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggaccattttgttctgttttaaaaggg 20741155  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  20741154 caggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 20741105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 28472878 - 28472642
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaact 132  Q
    |||||||||| |||| | | |||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||||          ||||||||    
T  28472878 ttagtgtgttgaataaagtggattctttgtacccacatgttttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaact 28472789  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||    
T  28472788 gtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaatggc 28472691  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||| |||||||||| | ||||| ||||||||  ||||||||||||    
T  28472690 aggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaatt 28472642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 11276884 - 11277122
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| | |||||| ||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  11276884 gttagtgtgttgaataaagtggattctttgtactcacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 11276973  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  11276974 tgtcatttctcttcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgttttaaaaggg 11277072  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  11277073 caggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaatt 11277122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 15827943 - 15828181
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  15827943 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 15828032  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  15828033 tgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaaggg 15828131  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
     | |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  15828132 tatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 15828181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 18505220 - 18505459
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||||  | ||         ||||||    
T  18505220 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggttagatt---------taaaac 18505310  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||| ||||  |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||||||||    
T  18505311 tgtcatttctcttcgttgttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttatgttttaaaaggg 18505409  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| ||||||||||||||||||||| ||||||||  |||||| |||||    
T  18505410 caggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataatt 18505459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 2322520 - 2322758
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| | | |         |||||||    
T  2322520 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggaaggt---------ctaaaac 2322610  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||||||||||| |||| |||||  | |||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||    
T  2322611 tgtcatttctctgtgttt-tggagaataaaatgagg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaagg 2322708  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || ||| |||||||||||||||||||| ||||| ||  ||||||||||||    
T  2322709 caagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaatt 2322758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 11445231 - 11444992
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| ||||| || ||||||| ||||| ||||||| | |||||||||||| |||||          ||||||    
T  11445231 ggttagtgtgttgaataaagtggattctttgtacccacgtgctttattccttgtttatttcatggatgagcatagggggtaggt----------ctaaaa 11445142  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    |||||||||||||| |||| | |||  | ||||| |  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||    
T  11445141 ctgtcatttctctgtgtttttagagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttattctgttttaaaggg 11445043  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||| ||||||||||| ||||| ||||||||  ||||||||||||    
T  11445042 gcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 11444992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 29859985 - 29859831
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  29859985 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 29859888  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||||||||| |||||||||| | ||||| ||||||||  ||||||||||||    
T  29859887 aaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaatt 29859831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 125 - 281
Target Start/End: Original strand, 31470701 - 31470856
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  31470701 ctaaaattgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 31470799  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||| ||||||||||||||||| | ||| ||| ||||  ||||||||||||    
T  31470800 aaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaatt 31470856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 12935458 - 12935697
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | |  ||||||||| ||||| || ||||||| ||||| ||||||| ||||| |||||||| |||||          ||||||    
T  12935458 ggttagtgtgttgaataaagtgaattctttgtacccacgtgatttattcgttgtttatttcatggttgaacatagggggtaggt----------ctaaaa 12935547  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    |||||||||||||| |||| |||||  | ||||| || |||||||||||||||| |||||||||||||||||||||||| |||||||||||| || || |    
T  12935548 ctgtcatttctctgtgtttatggagaat-aaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgttttgttctgttttataaag 12935646  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  12935647 gcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaatt 12935697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 1149734 - 1149972
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaact 132  Q
    |||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||| |||||||| |||||          ||||||||    
T  1149734 ttagtgtgttgaataaagtggattctttgtacccacatgctttattctttgtttatttcatggttgaacatagggggtaggt----------ctaaaact 1149823  T
Q  133 gtcatttctctgcgtttct-ggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||||||||||||||| | ||||  | ||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||    
T  1149824 gtcatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttctattttaaaaggg 1149922  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || |||||||||| ||||||| | ||| ||||||||  ||||||||||||    
T  1149923 catgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaatt 1149972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 156
Target Start/End: Complemental strand, 1149669 - 1149558
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||| ||||||||||||  |||||||||    
T  1149669 aatagaataaattctttgtgcccacatgttttattccttgttgatttaatggttgagcataggggtaggtctaaaatcgcctaaaactgctatttctctg 1149570  T
Q  145 cgtttctggagt 156  Q
     |||||||||||    
T  1149569 tgtttctggagt 1149558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 1149553 - 1149470
Alignment:
Q  198 aattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaatt 1149470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 258
Target Start/End: Complemental strand, 4811532 - 4811400
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    |||||||||| |||| ||||||||| || ||  | ||||| || |||| ||||||||||| |||||||||||||||||||||||| |||| |||| || |    
T  4811532 ctaaaactgttatttatctgcgtttttgaagaat-aaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatttt 4811434  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaa 258  Q
    ||||||||| ||||||||||||||||||||||||    
T  4811433 aaaagggcatgaccagtttcgtgagtagaccaaa 4811400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 189 - 281
Target Start/End: Complemental strand, 23074096 - 23074004
Alignment:
Q  189 aaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  23074096 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 23074004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 28472929 - 28473041
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||| ||||| | ||||||||| |||| |||||||| |||||||||||| ||||||||||||| |||||||||| |||||||| ||||||| ||||||||    
T  28472929 ggttggtgtgctgaatagaataaattccttgtgcccgcatgttttattccttgttgatttcatggttgagcatatgggtaggtctaaaaccccctaaaac 28473028  T
Q  132 tgtcatttctctg 144  Q
    |||||||| ||||    
T  28473029 tgtcatttttctg 28473041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 281
Target Start/End: Original strand, 29035069 - 29035177
Alignment:
Q  173 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaa 272  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||| ||||||||||  |||| |||||||||||| | ||| ||||||||  |||    
T  29035069 ggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaa 29035168  T
Q  273 agtgtaatt 281  Q
    |||||||||    
T  29035169 agtgtaatt 29035177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 3835145 - 3835266
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||||  |||||||||| ||||||||||||  ||||     
T  3835145 aaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaa 3835244  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    |||  |||  ||||||||||||    
T  3835245 cacatggaccaaaagtgtaatt 3835266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 29033560 - 29033439
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||| ||||  ||||||||||||||||| ||||||||  |||||||||||| |||||||||||||||| ||||||||| || |||||     
T  29033560 aaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 29033461  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
     |||||||  ||||||||||||    
T  29033460 tacgaggaccaaaagtgtaatt 29033439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 18296262 - 18296198
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggca 233  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||||    
T  18296262 ggtaggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggca 18296198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 32836286 - 32836114
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||| |        |||||||||| | ||| || ||||||| ||||  ||| ||| || |||| ||||| |||| || |||||    
T  32836286 tctaagatatgtttcaaattaaggtttttttggttagtgtgctgaatcgagtagattccttgtatccatatgcttgattccttgtttattttatggttga 32836187  T
Q  101 gcatag-gggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtag 173  Q
    |||||| |||||||| |||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  32836186 gcatagagggtaggtctaaaattgtctaaaactgtcatttctctgtgtttcaggag-ttgaaaataggaggtag 32836114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 35163516 - 35163639
Alignment:
Q  60 ttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagttt 158  Q
    |||| |||||||||||||||| ||||| ||||||| |||| ||||||||| ||||          ||||||||||||||||||||| |||| ||||| ||    
T  35163516 ttgtacccacatgttttattccttgtttatttcatggttgggcatagggggtagg----------cctaaaactgtcatttctctgtgtttttggag-tt 35163604  T
Q  159 gaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    |||||||||||||||||| |||| ||||| |||||    
T  35163605 gaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 31573969 - 31573817
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | || |||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    ||||       | |||||||    
T  31573969 ggttagtgtgttgaataaagtatattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg---tggtt------ggactaaaac 31573879  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    |||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  31573878 tgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaa 31573817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 25472314 - 25472389
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  25472314 ggttagtgtgatgaataaagtagattcattgtacccacatgttttattctttgtttatttcatggttgagcatagg 25472389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 218
Target Start/End: Complemental strand, 5114712 - 5114536
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||| | ||||||| |||| ||||| |||||||||| ||||| ||||||| ||||||||||||    |||| ||      |||||||    
T  5114712 ggttagtgtgctgaataaagtagattccttgtacccacctgttttattctttgtttatttcatggttgagcatagg---tggttgaa------ctaaaac 5114622  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    |||||||||| || |||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  5114621 tgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 5114536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 24640487 - 24640562
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| ||||||| |||||||| ||||| ||||||| ||||||||||||    
T  24640487 ggttagtgtgctgaataaagtagattccttgtacccacatattttattctttgtttatttcatggttgagcatagg 24640562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 29891382 - 29891457
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| |||||| |||||    
T  29891382 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagtatagg 29891457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 32836299 - 32836444
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcat-aggggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| ||| ||||  |||| |||| ||| ||||||  ||||| ||||||| ||||||||| ||||||||||          ||||||    
T  32836299 ggttagtgtgttgaataaaatggatttcttgttcccaaatgctttatttcttgtttatttcatggttgagcataaggggtaggt----------ctaaaa 32836388  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    |||| |||||||| |||||||| || |||||||||| ||||||||| |||| |||||    
T  32836389 ctgttatttctcttcgtttctgaag-ttgaaaatagaaggtaggactaaaactgcaa 32836444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 23074230 - 23074158
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    |||||||||| |||| | | |||||||||| ||||| || ||||||| ||||| ||||||| |||||||||||    
T  23074230 ttagtgtgttgaataaagtggattctttgtacccacgtgctttattccttgtttatttcatggttgagcatag 23074158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 5114790 - 5114845
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  5114790 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 5114845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 29891304 - 29891249
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  29891304 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 29891249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 30251013 - 30251068
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| |||||| |||||    
T  30251013 tagattttttgtacccacatgttttattctttgtttatttcatggttgaggatagg 30251068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 31073472 - 31073519
Alignment:
Q  60 ttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||| |||||||| ||||||||||||| ||||||| ||||||||||||    
T  31073472 ttgtacccacatgatttattcattgtttatttcatggttgagcatagg 31073519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 31574047 - 31574102
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  31574047 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 31574102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 11523915 - 11523854
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    |||| ||||||||| |||| |||||||||||||||| || || ||||||| ||||| |||||    
T  11523915 aataaaatagattccttgtacccacatgttttattccttatttatttcatggttgaacatag 11523854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 25472398 - 25472491
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||| ||||||||||||| | ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  25472398 ctaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 25472491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 28636582 - 28636619
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  28636582 ctaaaactgtcatttctgtgcgtttctggagttggaaa 28636619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 29891466 - 29891558
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    |||||||| |||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  29891466 ctaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 29891558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 30250915 - 30250862
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    ||||||| |||| |||||||| ||||||||||||| |||||||  |||||||||    
T  30250915 tagattccttgtacccacatgatttattcattgtttatttcatgattgagcata 30250862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 31073528 - 31073565
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  31073528 ctaaaactgtcatttctgtgcgtttctggagttggaaa 31073565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 25469010 - 25468943
Alignment:
Q  126 taaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaa 193  Q
    |||||||||||||||| |||||||||||| ||| |||||| |||| |||||| |||| ||||| |||||    
T  25469010 taaaactgtcatttctgtgcgtttctggaattt-aaaatagggagataggactaaaactgcaagaaaaa 25468943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 31073365 - 31073309
Alignment:
Q  51 atagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||| ||||  ||||||||||||||| ||||| ||||||| |||||| |||||    
T  31073365 atagattccttgtagccacatgttttattctttgtttatttcatggttgagtatagg 31073309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 5819182 - 5818934
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  5819182 gttagtgtgttgaatagaatatattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaact 5819083  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  5819082 gtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggc 5818983  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  5818982 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 5818934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 8647698 - 8647978
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||| ||||||||||||||||| ||||||||||||| |||||    
T  8647698 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatagaatagattccttgcgcccacatgttttattccttgttgatttcatggttga 8647797  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  8647798 gcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataat 8647897  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||||||    
T  8647898 tgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 8647978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 19359428 - 19359676
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| |||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  19359428 gttagtgtgctgaatagaatagattccttgtacccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaact 19359527  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||    
T  19359528 gccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 19359627  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  19359628 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 19359676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 24331815 - 24331564
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||||||||||||| |||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  24331815 ggttagtgtgctgaatagaatagattccttgtgctcacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaac 24331716  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa--tgataattgaaggaccattttgttctgttgtaaaag 229  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||   ||||||||||||||| |||||||||||| ||||||    
T  24331715 tgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgttttaaaag 24331616  T
Q  230 ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||||| |||| ||||||||  ||||||||||||    
T  24331615 ggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaatt 24331564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 14215525 - 14215246
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | || ||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  14215525 tctaagatatgtttcaaattagg-tttttttggttagtgtgctaaacagaatagattccttgtgcccacatgttttattccttgttgatttcatggttga 14215427  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
     ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14215426 ccataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataac 14215327  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||| |  ||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  14215326 tgaaggacctttttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaatt 14215246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 8461223 - 8461471
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| | |||||||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |    
T  8461223 gttagtgtgctgaatagaatagattcctagtgcccacgtgttttattcattgttgacttcatggttgagcataggggtaggtctaaaaccgcctaaaatt 8461322  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| |||||| ||    
T  8461323 gtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgttttaaaagagc 8461422  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| ||||||||||||||| ||||| ||||||||  ||||||||||||    
T  8461423 aggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 8461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 18183255 - 18182975
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||||||       |||| ||||| | |||| ||||||||| ||||||||||||||||||||  ||||||||||||| |||||    
T  18183255 tctaagatatgtttcaaattaggatttttttggttggtgtgctgaatataatagattccttgtgcccacatgttttatttcttgttgatttcatggttga 18183156  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  18183155 gcataggggtaggcctaaaactgcctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 18183056  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||| ||  ||||||||||||    
T  18183055 tgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatt 18182975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 2865007 - 2864759
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||||    
T  2865007 gttagtgtgctgaatataatagattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtagttctaaaaccgcctaaaact 2864908  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  2864907 gtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggc 2864808  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | || || |||||||||||| ||||| ||| ||||  ||||||||||||    
T  2864807 atgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaatt 2864759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 25000349 - 25000629
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||||||       | |||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  25000349 tctaagatatgtttcaaattaggattttcttgattagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttga 25000448  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25000449 gcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataat 25000548  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| ||||||||||||||||| ||||||  || ||||| |||||||||||| ||||| || || ||  ||||||||||||    
T  25000549 tgaatgaccattttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaatt 25000629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 164475 - 164196
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||||         |||||||||| | |||| ||||||||  ||||||||||||||||||||| ||||| ||||||| |||||    
T  164475 tctaagatatgtttcaaattagagtttttttggttagtgtgctgaatataatagatttcttgtgcccacatgttttattccttgttcatttcatggttga 164376  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  164375 gcataggggtaggtctaaaaccgcataaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataat 164277  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||| ||||||| |||| |||||||||||||||||||||||||||||  |||| ||||||||  ||||||||||||    
T  164276 tgaatgaccgttttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaatt 164196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 16018847 - 16019127
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||    
T  16018847 tctaagatatgtttcaaattagggttttcttggttagtgtgctgaatagaatagattccttgtgcccatatgttttattccttgttgatttcatggttga 16018946  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  16018947 gcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataat 16019046  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| |||||||| |||| || |||||| ||||||||| |||||||||||  ||||| || |||||  ||||||||||||    
T  16019047 tgaagaaccattttattctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaatt 16019127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 29455027 - 29454768
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttatt--cattgttgatttcatagtt 98  Q
    |||||||||||||||||||||| |       |||||||| | | |||||||||||||| ||||||||||||||||| ||  | ||||||||||||| |||    
T  29455027 tctaagatatgtttcaaattagaatttttttggttagtgagctgaatagaatagattccttgtgcccacatgtttttttatccttgttgatttcatggtt 29454928  T
Q  99 gagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29454927 gagcatatgggtaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgata 29454828  T
Q  199 attgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaa 258  Q
    ||| ||||||| |||||||||||| |||||||||| ||||| |||||||||||| |||||    
T  29454827 attcaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaa 29454768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 24362121 - 24361843
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||||         |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  24362121 tctaagatatgtttcaaattagtgtttttttggttagtgtgctgaatagaatagattctttgtgcccacatgttttattccttgttgatttcatggttga 24362022  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |    
T  24362021 gcataggggtaggtctaaaaccgcctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatact 24361923  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaat 280  Q
    |||||||||||||||||||||| || ||||||| || |||||||||| |||| ||||| || | |||  |||||||||||    
T  24361922 tgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 45 - 281
Target Start/End: Complemental strand, 15372114 - 15371876
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaa----aactgtcatttc 140  Q
    |||||||||||| ||| ||||||||||| | ||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||    |||| |||||||    
T  15372114 aatagaatagatcctt-gtgcccacatgatgtattccttgttgatttcatggttgagcatagaggtaggtctaaaaccgcctaattaaaactatcatttc 15372016  T
Q  141 tctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccag 240  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  15372015 tctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggacca- 15371917  T
Q  241 tttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
     |||||||||||||||||  |||||||| ||||||||||||    
T  15371916 attcgtgagtagaccaaaatacgaggatcaaaagtgtaatt 15371876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 24325496 - 24325218
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||||         |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  24325496 tctaagatatgtttcaaattagtgtttttttggttagtgtgctgaatagaatagattctttgtgcccacatgttttattccttgttgatttcatggttga 24325397  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||| |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||||| |||||||||||| |    
T  24325396 gcataggggtaggtctaaaaccggctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcgacaaaaatgatact 24325298  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaat 280  Q
    |||||||||||||||||||||| || ||||||| || |||||||||| |||| ||||| || | |||  |||||||||||    
T  24325297 tgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 15709230 - 15709508
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||         ||||||||| | ||||||||| |||  ||||||||||||||||||||| ||||||||||||| |||||    
T  15709230 tctaagatatgtttcaaattagggttttttttgttagtgtgctgaatagaataaatttcttgtgcccacatgttttattccttgttgatttcatggttga 15709329  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||| | |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||     
T  15709330 gca-atgggtaggtctaaaaccgcctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataac 15709428  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||||||| |||||||||||| | |||||||| ||| |||||| ||||||| ||||| ||| | ||  ||||||||||||    
T  15709429 taaaggaccgttttgttctgtt-ttaaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaatt 15709508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 2865056 - 2865295
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  2865056 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 2865145  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||| ||||| |||||  | ||||| || |||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  2865146 ctgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 2865244  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  2865245 gcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 2865295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 8647682 - 8647443
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||| ||||| |||||||| ||||||| ||||| ||||||| | ||||||||| ||||||||          ||||||    
T  8647682 ggttagtgtgttgaataaagtggattttttgtacccacatgctttattccttgtttatttcatggatgagcatagagggtaggt----------ctaaaa 8647593  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  8647592 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaacg 8647494  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  8647493 gcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 8647443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 29455043 - 29455282
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| || || ||||||| |||||||||| |   |||| |      | |||||||    
T  29455043 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttatttatttcatggttgagcatatg---aggtat------gtctaaaac 29455133  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29455134 tgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggg 29455232  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||||||||| ||||||||  ||| ||||||||    
T  29455233 caggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaatt 29455282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 5819230 - 5819469
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| ||| |||| ||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| ||| |          ||||||    
T  5819230 ggttagtgtgttgaatacaatggattttttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtagat----------ctaaaa 5819319  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  5819320 ctgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 5819418  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  5819419 gcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 5819469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 18183271 - 18183509
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| |||||||  |||| ||||||| |||||||||||||| |||||          |||||||    
T  18183271 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccctgtttatttcatggttgagcatagggggtaggt----------ctaaaac 18183360  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||| |||||||||||||| |||||  | |||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  18183361 tgttatttctctgcgtttttggagaataaaatgagg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 18183459  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  18183460 caggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 18183509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 24362137 - 24362376
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| |||| ||| ||||||| ||||| ||||||| ||||||||||||||      |||    | |||||||    
T  24362137 ggttagtgtgttgaataaagtggattctttgtacccagatgctttattccttgtttatttcatggttgagcatagggga-----taa----gtctaaaac 24362227  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||    
T  24362228 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttattctgttttaaaaggg 24362326  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| |||||  |||||||  ||||||||||||    
T  24362327 caggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaatt 24362376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 258
Target Start/End: Complemental strand, 8461174 - 8460958
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  8461174 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 8461085  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||| ||| |||||  | ||||| || |||| ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  8461084 ctgtcatttctctgcatttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 8460986  T
Q  231 gcaggaccagtttcgtgagtagaccaaa 258  Q
    |||||||||||||||||||||| |||||    
T  8460985 gcaggaccagtttcgtgagtaggccaaa 8460958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 19359380 - 19359141
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||| |||||  | ||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||| ||    
T  19359380 ggttagtgtgttgaataaagtggattttttgtagctacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctagaa 19359291  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||    
T  19359290 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagg 19359192  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| || |||||  ||||||||||||    
T  19359191 gcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaatt 19359141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 15709214 - 15708976
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | ||||||||||  ||||||| ||||||  ||||| ||||||| |||||||||||||| |||||          ||||||    
T  15709214 ggttagtgtgttgaataaagtggattctttgtatccacatgctttatttcttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 15709125  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||    
T  15709124 ctgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 15709027  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||  ||||||||||||||||| ||||| ||| ||||  ||||||||||||    
T  15709026 gcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaatt 15708976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 125 - 281
Target Start/End: Original strand, 15372258 - 15372413
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||||||||||| ||||   | ||||| ||| |||| || ||||||||||||||||||||| |||||||||| |||||||||||| |    
T  15372258 ctaaaactgtcatttctctgcgtttttggaaaat-aaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 15372356  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  15372357 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 15372413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 273
Target Start/End: Original strand, 164492 - 164723
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  164492 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 164581  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||| | ||| |||||  | ||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  164582 ctgtcatttctctacatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 164680  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaa 273  Q
    ||| ||||||||| |||||| | ||||| || |||||| ||||    
T  164681 gcaagaccagtttagtgagttggccaaaacatgaggatcaaaa 164723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 10722036 - 10721873
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactg 133  Q
    |||||||| | |||||| ||||||  |||| |||||||| ||||||| ||||| ||||||| |||||  |||||||||||| |||||| |||||||||||    
T  10722036 ttagtgtgctgaatagagtagatttcttgtacccacatgctttattccttgtttatttcatggttgaatataggggtaggtctaaaactgcctaaaactg 10721937  T
Q  134 tcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    |||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||    
T  10721936 tcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 10721873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 33 - 198
Target Start/End: Complemental strand, 27307313 - 27307148
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||| | |||||| ||||||| |||| | |||||| ||||||| ||||| ||||||| ||||||||||| |||||||| |||||| |||||||||    
T  27307313 gttagtgtgctgaatagagtagattcattgtactcacatgctttattccttgtttatttcatggttgagcatagcgggtaggtctaaaactgcctaaaac 27307214  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  27307213 tgtcatttctatgcgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgata 27307148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 125 - 281
Target Start/End: Original strand, 14215628 - 14215783
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || | || ||||||||||||||||||||||||| |||||||||| |||||||||||| |    
T  14215628 ctaaaactgtcatttctctacgtttttggagaat-aaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 14215726  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||| |||||||||||||||  |||| ||||||||  |||| |||||||    
T  14215727 aaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaatt 14215783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 28495128 - 28494931
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||| |        |||||||||| | |||| | ||||||| |||| |||||||| ||||||  ||||| ||||||| |||||    
T  28495128 tctaagatatgtttcaaattaaggtgtttttggttagtgtgctgaatatagtagattcattgtacccacatgctttatttcttgtttatttcatggttga 28495029  T
Q  101 gcatagg-ggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    ||||||| ||||||| ||||||  ||||||| ||||| |||||||||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||    
T  28495028 gcataggtggtaggtctaaaactacctaaaattgtcacttctctgcgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 28494931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 281
Target Start/End: Original strand, 14463906 - 14464060
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||||||||| | ||||||||| || |    
T  14463906 ctaaaactgtcatttctctgcgtttttggagaat-aaaattgg-ggtaggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttctatttt 14464003  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||| ||  |  |||||||||||||| ||||| |||||||| |||||||||||||    
T  14464004 aaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaatt 14464060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 264
Target Start/End: Complemental strand, 25000334 - 25000112
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||| | ||||| |          ||||||    
T  25000334 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatatgaggtagat----------ctaaaa 25000245  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||| ||||| |||||  | ||||| || |||||||| |||||||||| ||||||||||||| |||||||||||| ||||||| ||| |||    
T  25000244 ctgtcatttctctacgtttttggagaat-aaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggaccattttattctgttttaacagg 25000146  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacga 264  Q
    ||| |||||  ||||||||||| ||||| |||||    
T  25000145 gcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 251
Target Start/End: Original strand, 24331861 - 24332073
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  24331861 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggataggt----------ctaaaa 24331950  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaa-tgcaacaaaa-atgataattgaaggaccattttgttctgttgt-aaa 227  Q
    ||||||||||||||||||| |||||  | | ||| || |||||||||||||| |||||||||| |||||||||| |||||| |||||||||||| | |||    
T  24331951 ctgtcatttctctgcgtttttggagaat-agaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcaggaccgttttgttctgttttaaaa 24332049  T
Q  228 agggcaggaccagtttcgtgagta 251  Q
    | ||||||| ||||||||||||||    
T  24332050 aaggcaggatcagtttcgtgagta 24332073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 4222150 - 4222262
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 268  Q
    ||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||| |||||||||| ||||| ||||||||| || ||||| ||||||||     
T  4222150 ggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggac 4222249  T
Q  269 taaaagtgtaatt 281  Q
     ||||||||||||    
T  4222250 caaaagtgtaatt 4222262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 14462770 - 14462686
Alignment:
Q  124 cctaaaactgtcatttctctgcgtttctg----gagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 204  Q
    |||||||||||||||||||| ||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14462770 cctaaaactgtcatttctctacgtttctgtctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 7349436 - 7349557
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||| ||||| ||||||||||||||||| |||||||   ||||||| |||| |||||| ||||||||| ||||||||||||||||||     
T  7349436 aaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaa 7349535  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  ||||||||||||    
T  7349536 cacgaggaccaaaagtgtaatt 7349557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 4219780 - 4219668
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 268  Q
    ||||||||||||||||||||||||||||||| | |||||| | ||||||||||| ||||| |||| ||||| ||| || | ||| ||||| |||||||||    
T  4219780 ggtaggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggat 4219681  T
Q  269 taaaagtgtaatt 281  Q
     ||||||||||||    
T  4219680 caaaagtgtaatt 4219668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 6018441 - 6018335
Alignment:
Q  158 tgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaa 257  Q
    |||||||||  |||||||| |||| ||||||||||||||||||||||| |  ||||||||||||| ||||||| || ||||||||||||||||||| |||    
T  6018441 tgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaa 6018343  T
Q  258 atcacgag 265  Q
    | ||||||    
T  6018342 aacacgag 6018335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 16018830 - 16018594
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | |  ||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  16018830 gttagtgtgttgaataaagtgaattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 16018741  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||| |||   ||| |||||  | ||||| || ||||||||| ||||||||| |||||| |||||||||||||| ||||||||| || ||||||||    
T  16018740 tgtcatttttctatatttttggagaat-aaaatggg-ggtaggacggaaaatgcaataaaaat-ataattgaaggaccgttttgttctattttaaaaggg 16018644  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || || || |||||||| ||| ||||| ||||| ||  ||||||||||||    
T  16018643 catgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaatt 16018594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 16752890 - 16753022
Alignment:
Q  60 ttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagttt 158  Q
    |||| |||||||||||||||  ||||| ||||||| ||||||||||| |||||||| |||| | ||||||||||| ||||| ||||||||||||||| ||    
T  16752890 ttgtacccacatgttttatttcttgtttatttcatggttgagcatagcgggtaggtctaaa-ctgcctaaaactgccatttttctgcgtttctggag-tt 16752987  T
Q  159 gaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    ||||||||||| |||| | |||| ||||| |||||    
T  16752988 gaaaataggagttaggtctaaaactgcaaaaaaaa 16753022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 7348685 - 7348564
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||||||||| |||||||||||||||||  ||||||   |||||||||||| |||||||||| ||||| |||||||||||||| |||     
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    || |||||  |||| |||||||    
T  7348585 catgaggaccaaaaatgtaatt 7348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 14463809 - 14463732
Alignment:
Q  54 gattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| |||||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||    
T  14463809 gattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggtaggtctaaaaccgcctaaaac 14463732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 4623265 - 4623153
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 268  Q
    ||||||||| ||||||| | |||||||||||||||||||| ||||||||||||| ||||  |||||||||| |||||||||||   |||| ||||| ||     
T  4623265 ggtaggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgac 4623166  T
Q  269 taaaagtgtaatt 281  Q
     ||||||||||||    
T  4623165 caaaagtgtaatt 4623153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 6019189 - 6019282
Alignment:
Q  160 aaaataggaggtaggacgaaaa-atgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtag 252  Q
    ||||| |||||||||||||||| |||||||||||||||||||| || |||  |||||||||||| |||||| ||| || |||||||||||||||    
T  6019189 aaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgtgagtag 6019282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 28495143 - 28495288
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | ||||| |||| |||||||||||||||| ||||| ||||||| |||||||||| | |||||||          ||||||    
T  28495143 ggttagtgtgtttaataaagtggattccttgtacccacatgttttattccttgtttatttcatggttgagcatatgaggtaggt----------ctaaaa 28495232  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    || ||||||||||||| |||||||| |||||||||||||||||||| |||| |||||    
T  28495233 ctatcatttctctgcggttctggag-ttgaaaataggaggtaggactaaaactgcaa 28495288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 41834396 - 41834511
Alignment:
Q  77 attcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagga 175  Q
    |||| ||||| ||||||| |||||| ||||||| ||||| |||||  | ||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  41834396 attccttgtttatttcatggttgagtataggggctaggtctaaaattgtctaaaactgtcatttctctgcgtttcaagag-ttgaaaataggaggtagga 41834494  T
Q  176 cgaaaaatgcaacaaaa 192  Q
    | |||| ||||| ||||    
T  41834495 ctaaaactgcaaaaaaa 41834511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 5161827 - 5161752
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | |||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  5161827 ggttagtgtgcttaataaagtagattctttgtacccacatgttttattctttgtttatttcatggttgagcatagg 5161752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 32305977 - 32305886
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    |||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| ||| |||||| || | |||| |||||||||    
T  32305977 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataagaggtaggactaaaactgcaa-aaacatgatagtttagggacgattttgttc 32305886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 38900944 - 38901012
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||| |||| | |||||||||||| |||||||||||||||| ||||| ||||||| |||||    
T  38900944 ggttagtgtgttgaataaagtagattctttgtacccacatgttttattctttgtttatttcatggttga 38901012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 8418923 - 8418998
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  8418923 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattccttgtttatttcatggttgagcatagg 8418998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 18149967 - 18149894
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||    
T  18149967 ggttagtgtgctgaataaagtagattcattgtacccacatgttttattctttgtttatttcatggttgagcata 18149894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 24325512 - 24325589
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg 109  Q
    |||||||||||| |||| | | |||||||||| |||| ||| ||||||| ||||| ||||||| ||||||||||||||    
T  24325512 ggttagtgtgttgaataaagtggattctttgtacccagatgctttattccttgtttatttcatggttgagcatagggg 24325589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 4624644 - 4624736
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtag 252  Q
    ||||| || ||||||||||||||||||||| |||||||||||||| ||   ||||||| |||| ||||  | || ||||| ||||||||||||    
T  4624644 aaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtag 4624736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 14340623 - 14340551
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||||  ||| | |||||||||||| |||||||||||||||| ||||| ||||||| ||||| ||||    
T  14340623 gttagtgtgttgtataaagtagattctttgtacccacatgttttattctttgtttatttcatggttgaacata 14340551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 27307444 - 27307499
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 181  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  27307444 ctaaaaatgtcatttctctgcatttctggag-ttgaaaataggaggtaggactaaaa 27307499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 15029631 - 15029686
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||||||||||||||| ||||| | ||||| ||||||||||||    
T  15029631 tagattctttgtacccacatgttttattctttgtttacttcatggttgagcatagg 15029686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 21371018 - 21371073
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  21371018 tagattctttgtacccacatgatttattccttgtttatttcatggttgagcatagg 21371073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 28289966 - 28290020
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| |||||||||||    
T  28289966 tagattccttgtacccacatgttttattctttgtttatttcatggttgagcatag 28290020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 28290030 - 28290122
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  28290030 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 28290122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 13814155 - 13814190
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaa 204  Q
    ||||||||||||| ||||||||||||||||||||||    
T  13814155 ggtaggacgaaaagtgcaacaaaaatgataattgaa 13814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 28289908 - 28289853
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||| ||||| ||||||    
T  28289908 tagattctttgtacccacatgatttattccttgtttatttcatggttgaacatagg 28289853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 13557180 - 13557079
Alignment:
Q  96 gttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatg 195  Q
    ||||||||||| ||||||| |||||| || | ||| ||  ||||||||||||||||| || || |||||| || ||||||| |||| ||||| ||| |||    
T  13557180 gttgagcatagaggtaggtctaaaacggcatcaaattgcaatttctctgcgtttctgcag-ttcaaaataagatgtaggactaaaactgcaaaaaacatg 13557082  T
Q  196 ata 198  Q
    |||    
T  13557081 ata 13557079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 16752741 - 16752680
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    |||||||| |||||||| ||||||| ||||||| |||||||||||||| ||| |||| |||||    
T  16752741 ctaaaactatcatttctttgcgtttatggagtt-gaaaataggaggtatgacaaaaactgcaa 16752680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 15029695 - 15029732
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  15029695 ctaaaactgtcatttatgtgcgtttctggagtttgaaa 15029732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 19291517 - 19291424
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||| ||||||| ||||||| ||||  ||||| || ||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  19291517 ctaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 19291424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 28289844 - 28289807
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  28289844 ctaaaactgtcatttctgtgcgtttctggagttggaaa 28289807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 5161900 - 5161972
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccg 123  Q
    ||||||| |||| |||||||| ||||||| || || ||||||| |||||||||||| ||| || |||||||||    
T  5161900 tagattccttgtacccacatgatttattccttatttatttcatggttgagcataggtggttggattaaaaccg 5161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 8419008 - 8419098
Alignment:
Q  126 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||| |||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||| ||| || |||||| |||||||||    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaaat-atagtttaaggacgattttgttc 8419098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 14340793 - 14340849
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 181  Q
    ||||||||||||||||||| ||||| ||||||| ||||  ||||| |||||| ||||    
T  14340793 ctaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaa 14340849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 27307361 - 27307437
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg 109  Q
    ||||||||||| |||| | | ||||| | || |||| ||||||||||  ||||| ||||||| ||||||||||||||    
T  27307361 gttagtgtgttgaataaagtggattcctagtacccaaatgttttattttttgtttatttcatggttgagcatagggg 27307437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 1927 - 2207
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  1927 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatagaatagattcattgtgcccacatgttttattccttgttgatttcatggttga 2026  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
     ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2027 acataggggtaggtctaaaaccgcctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 2126  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||| |||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||    
T  2127 tgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaatt 2207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 1911 - 1672
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| ||| |||||||||||| || || |||||||  |||| |||||||| |||||          ||||||    
T  1911 ggttagtgtgttgaataaagtggattctttgtaccctcatgttttattccttttttatttcatgtttgatcatagggggtaggt----------ctaaaa 1822  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  1821 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacattttgttctgttttaaaagg 1723  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| || |||||  ||||||||||||    
T  1722 gcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaatt 1672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 13224900 - 13225179
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||    
T  13224900 tctaagatatgtttcaaattagg-tttttttggttagtgtgctgaatagaatagattacttgtgcccacatgttttattccttgttgatttcatggttga 13224998  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13224999 gcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 13225098  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  13225099 tgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 13225179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 11656748 - 11656997
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || || ||||||||||    
T  11656748 ggttagtgtgatgaatagaataaattctttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctacaatcgcctaaaac 11656847  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  11656848 tgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggc 11656947  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  11656948 cgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 11656997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 19176543 - 19176295
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||| |||||||| ||||||||||||||| |    
T  19176543 gttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttattgatttcatggttgagcatatgggtaggtctaaaaccgcctaaaatt 19176444  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  19176443 gtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 19176344  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| |||||||||||||| ||||| ||||||||  ||||||||||||    
T  19176343 aggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 19176295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 41681426 - 41681674
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  41681426 gttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaact 41681525  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
      |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||     
T  41681526 accatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggt 41681625  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||| ||| ||||| ||||||||  ||||||||||||    
T  41681626 aggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaatt 41681674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 9929194 - 9928914
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||| ||||||||        ||||| |||| | |||| ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||    
T  9929194 tctaagatatgttttaaattagggtttttttggttaatgtgctgaataaaatagattccttgtgcctacatgttttattccttgttgatttcatggttga 9929095  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9929094 gcataagggtaggtctaaaaccgcctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataat 9928995  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||    
T  9928994 tgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaatt 9928914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 36 - 281
Target Start/End: Complemental strand, 44831497 - 44831252
Alignment:
Q  36 agtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtc 135  Q
    |||||| | |||||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||    
T  44831497 agtgtgctgaatagaatagattctttgtgcccacatgcttaattccttgttgatttcatggttgagcataggggcaggtctaaaaccgcctaaaactatc 44831398  T
Q  136 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcagg 235  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  44831397 atttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgttttaaaagggcagg 44831298  T
Q  236 accagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||||||||||| ||||| || |||||  ||||||||||||    
T  44831297 accaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaatt 44831252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 33743174 - 33742927
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  33743174 gttagtgtgctgaatagaataaattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaactgcctaaaact 33743075  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||| |||||||||    
T  33743074 gtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagacc-gtttgttctgttttaaaagggc 33742976  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||||||||||||||||||  |||| ||||||||  ||||||||||||    
T  33742975 aagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaatt 33742927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 31133512 - 31133760
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||| ||||||||| ||||||||| ||||||||||  ||||||||||||| ||||||||||| | ||||| ||||||||| ||||||     
T  31133512 gttagtgtgctgaatataatagattccttgtgcccatatgttttatttcttgttgatttcatggttgagcatagagataggtctaaaaccgcataaaacc 31133611  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  31133612 gtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgttttaaaagggc 31133711  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| ||||||||||||||| ||||| ||||||||  ||||||||||||    
T  31133712 aggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 31133760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 12572155 - 12572391
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| |||| |||||||||||||||||||||||            ||||||||||||| | |||||||||||||||||    
T  12572155 gttagtgtgctgaatagaatagattccttgtacccacatgttttattcattgttg------------agcataggggtagatctaaaaccgcctaaaact 12572242  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||    
T  12572243 gcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagc 12572342  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||| |||||||||||||||||||| ||||||||  ||||||||||||    
T  12572343 atgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaatt 12572391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 77 - 281
Target Start/End: Original strand, 33328476 - 33328680
Alignment:
Q  77 attcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggac 176  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  33328476 attccttgttgatttcatggttgagcataggggtaggtttaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggac 33328575  T
Q  177 gaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtg 276  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| |||||| ||| ||| |||||||||||||| | ||| ||||||||  ||||||     
T  33328576 gaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtc 33328675  T
Q  277 taatt 281  Q
    |||||    
T  33328676 taatt 33328680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 4630071 - 4629802
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||| ||||||||| ||||| ||||||||||||||| ||||||||||||| |||||    
T  4630071 tctaagatatgtttcaaattagggttttattggttagtgtgctgaatataatagattccttgtgtccacatgttttattccttgttgatttcatggttga 4629972  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||| | ||||||| |||            ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  4629971 gcatggaggtaggtataat-----------ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataat 4629883  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||| ||||||||| || ||||||||||||||||||||||||| ||  ||||| |||||| |||||||||| ||||    
T  4629882 tgaatgaccgttttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaatt 4629802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 45 - 194
Target Start/End: Complemental strand, 9177873 - 9177724
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||     
T  9177873 aatagaatagattccttgtgcccacatgttttattctttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaactgtcatttctctt 9177774  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat 194  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9177773 cgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 127 - 281
Target Start/End: Original strand, 34540934 - 34541088
Alignment:
Q  127 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaa 226  Q
    |||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  227 aagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 34541088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 19176591 - 19176830
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| ||| | || ||||||| ||||| ||||||| |||||||||||| |||||||          ||||||    
T  19176591 ggttagtgtgttgaataaagtggattctttgtacccgcgtgctttattctttgtttatttcatggttgagcataggtggtaggt----------ctaaaa 19176680  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||| ||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  19176681 ctgtcatttgtctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 19176779  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||| ||||||||| ||||| ||||||||  ||||||||||||    
T  19176780 gcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaatt 19176830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 41681377 - 41681139
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||  ||||| ||||||| |||||| ||||||| || |||||||||             
T  41681377 ggttagtgtgttgaataaagtggattctttgtacccacatgctttatttcttgtttatttcatggttgagtatagggggtatgtttaaaac--------- 41681287  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
     |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  41681286 -tgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 41681190  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  41681189 gcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 41681139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 9929958 - 9930197
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||| ||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  9929958 ggttagtgtgttgaataaagtggattttttgtacccacatgatttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 9930047  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    || ||||||||||||| || |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  9930048 ctatcatttctctgcgcttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccattttgttctattttaaaagg 9930146  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| |||||  |||||||  ||||||||||||    
T  9930147 gcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaatt 9930197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 33328401 - 33328163
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  33328401 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 33328312  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||| ||||||| |||||  | ||||| |  |||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  33328311 tgtcatttctttgcgtttttggagaat-aaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaaggg 33328213  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || || ||||||||||||||| ||||| ||||||||  ||||||||||||    
T  33328212 catgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 33328163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 12572108 - 12571868
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| || || ||||||| |||||||||||||| |||||          ||||||    
T  12572108 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttttttatttcatggttgagcatagggggtaggt----------ctaaaa 12572019  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggagg-taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaag 229  Q
    ||||||||||||||||||| |||||  | ||||| || || |||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  12572018 ctgtcatttctctgcgtttttggagaat-aaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaag 12571920  T
Q  230 ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || || ||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  12571919 ggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 12571868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 13224884 - 13224646
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  13224884 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 13224795  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||||||   |||||||||||| |||||||    
T  13224794 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggattgttttgttctgttttaaaagg 13224696  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||||||||||| ||||| ||||| ||  ||||||||||||    
T  13224695 gca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatt 13224646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 11656698 - 11656460
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaact 132  Q
    |||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||| |||| |||||||||          ||||||||    
T  11656698 ttagtgtgttgaataaagtggattctttgtacccacatgctttattctttgtttatttcatggttgaacataaggggtaggt----------ctaaaact 11656609  T
Q  133 gtcatttctctgcgtttct-ggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    | ||||||||||||||| | ||||  | ||||| || ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||    
T  11656608 gccatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttcagttttaaaaggg 11656510  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  11656509 catgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 11656460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 31133463 - 31133225
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||| ||||| |||||||||||||||| ||||| ||||||| |||||||||| | |||||||          |||||||    
T  31133463 gttagtgtgttgaataaagtggattttttgtacccacatgttttattccttgtttatttcatggttgagcataagaggtaggt----------ctaaaac 31133374  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||  ||||||| |||| ||||||||    
T  31133373 tgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggactgttttgttttgttttaaaaggg 31133275  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | |||||||||||||||||||  |||| ||||||||  ||||||||||||    
T  31133274 cgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaatt 31133225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 9177937 - 9178175
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||| |||||||          ||||||    
T  9177937 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcataggaggtaggt----------ctaaaa 9178026  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
     |||||||||||||||||| | |||  | ||||| || |||| || |||||||||||||||||||||| |||||||||| |||||||||||| ||| |||    
T  9178027 ttgtcatttctctgcgttttttgagaat-aaaatggg-ggtaagatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaagagg 9178124  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| || ||||||||||||||| ||||| ||||||||  ||||||||||||    
T  9178125 gcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 9178175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 277
Target Start/End: Original strand, 44831546 - 44831781
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    ||||| |||||| |||| | | |||||||||| |||||||| ||||||| ||||  ||||||| |||||||||||||| |||||          ||||||    
T  44831546 ggttaatgtgttgaataaagtggattctttgtacccacatgctttattcgttgtctatttcatggttgagcatagggggtaggt----------ctaaaa 44831635  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    |||||||||||||| |||| |||||  | ||||| || |||||||| |||||||||||||||||||||||||||  ||| |||||||||||| ||||||     
T  44831636 ctgtcatttctctgtgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataaccgttttgttctgttttaaaaga 44831734  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgt 277  Q
    |||||||||||||||||||||  ||||| ||||||||  ||||||||    
T  44831735 gcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgt 44831781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 33743304 - 33743417
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||  ||| |||||||||||| |    
T  33743304 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgttttgttctgtttt 33743402  T
Q  225 aaaagggcaggacca 239  Q
    |||| ||||| ||||    
T  33743403 aaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 11336959 - 11337062
Alignment:
Q  178 aaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgt 277  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||| |||||| |||||||||||  ||||| ||||| ||  ||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  278 aatt 281  Q
    ||||    
T  11337059 aatt 11337062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 281
Target Start/End: Original strand, 4630177 - 4630326
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||| ||||||||| |||||  | ||||| || ||||||| ||||||||||||||      ||||||||||||| || | ||||||| |    
T  4630177 ctaaaactgtcatttttctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaa------taattgaaggaccgttgtattctgtttt 4630269  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||  ||||||||| |||||||||||| ||||| ||||| ||| ||||||||||||    
T  4630270 aaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaatt 4630326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 10918252 - 10918131
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || |||| || |||||||||||||||||||||| ||||||||| |||||| |||||| |||   |||| ||||| ||||||||||||| ||||     
T  10918252 aaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtgagtagatcaaaa 10918153  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  |||| |||||||    
T  10918152 cacgaggacaaaaaatgtaatt 10918131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 8073985 - 8074077
Alignment:
Q  174 gacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 267  Q
    |||| |||||||||||||| ||||||||||||||  ||||||||||||| ||||||| || || || |||||||| ||| ||||| ||||||||    
T  8073985 gacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgagga 8074077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 28877192 - 28877281
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaa 120  Q
    ||||| |||||| |||| | | ||||||||||  ||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||    
T  28877192 ggttaatgtgttgaataaagtggattctttgtatccacatgttttattccttgtttatttcatagttgagcataggaggtaggtctaaaa 28877281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 9797028 - 9797103
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  9797028 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 9797103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 28254670 - 28254595
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  28254670 ggttagtgtgcttaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 28254595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 43958311 - 43958264
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga 207  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||    
T  43958311 aaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 18428063 - 18428137
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    |||||||||| | |||| ||||||||| || | |||||||||||||||| ||||| ||||||| |||||||||||    
T  18428063 ggttagtgtgctgaataaaatagattccttatacccacatgttttattctttgtttatttcatggttgagcatag 18428137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 218
Target Start/End: Complemental strand, 18049835 - 18049658
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||| | |||| | ||||||| |||| ||||||||||||| || ||||| ||||||| |||||||||||| ||| || |          |||||    
T  18049835 ggttagtgtgctgaataaagtagattccttgtacccacatgttttaatctttgtttatttcatggttgagcataggtggttggat----------taaaa 18049746  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  18049745 ctgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 18049658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 18805322 - 18805267
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 181  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||||||| ||||    
T  18805322 ctaaaactgtcatttctctgtgtttctggag-ttgaagataggaggtaggactaaaa 18805267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 5731060 - 5730985
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||| ||||||    
T  5731060 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgaacatagg 5730985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 7910938 - 7910993
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  7910938 tagattccttgtacccacatgttttattccttgtttatttcatggttgagcatagg 7910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 28877145 - 28877070
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg 109  Q
    |||||||||| |||| | | ||||| |||| |||||||||||||||| ||||| ||||||| ||||| ||||||||    
T  28877145 ttagtgtgttgaataaagttgattccttgtacccacatgttttattccttgtttatttcatggttgaacatagggg 28877070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 34799324 - 34799249
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||| | ||||||| || | |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  34799324 ggttagtgtgttgaataaagtagattccttatacccacatgctttattctttgtttatttcatggttgagcatagg 34799249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 2208931 - 2208884
Alignment:
Q  60 ttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  2208931 ttgtacccacatgttttattctttgtttatttcatggttgagcatagg 2208884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 16578418 - 16578473
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||  ||||||||||||    
T  16578418 tagattccttgtacccacatgttttattctttgtttatttcacggttgagcatagg 16578473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 18049913 - 18049968
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  18049913 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 18049968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 41260501 - 41260430
Alignment:
Q  36 agtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||| |||| | ||||||  |||| ||| |||||||||||| ||||| ||||||| ||||||||||||    
T  41260501 agtgtgttgaataaagtagatttcttgtacccgcatgttttattctttgtttatttcatggttgagcatagg 41260430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 28254812 - 28254874
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  28254812 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 28254874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 599800 - 599873
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||  ||||| ||||||| ||| ||||||    
T  599800 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattttttgtttatttcatggtttagcata 599873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 15256155 - 15256204
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgag 101  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||    
T  15256155 tagattccttgtacccacatgttttattctttgtttatttcatggttgag 15256204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 28254586 - 28254493
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    |||||| |||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  28254586 ctaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 28254493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 35427137 - 35427189
Alignment:
Q  55 attctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  35427137 attccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 35427189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 121)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 39555862 - 39555583
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||||         |||||||||| | |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  39555862 tctaagatatgtttcaaattagtgtttttttggttagtgtgctgaatataatagattctttgtgcccacatgttttattccttgttgatttcatggttga 39555763  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39555762 gcataggg-taggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataat 39555664  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  39555663 tgaaggaccattttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 39555583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 31778906 - 31778658
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  31778906 gttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttgagcatacgggtaggtctaaaaccgcctaaaact 31778807  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||| |||||||||    
T  31778806 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgttttaaaagggc 31778707  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||| ||||||||||||| ||||||||  ||||||||||||    
T  31778706 aggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaatt 31778658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 4275624 - 4275904
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| |||||||||||||||||||||  |||||||||||| |||||    
T  4275624 tctaagatatgtttcaaattagggtttttttggttagtgtgctaaatagaatagattccttgtgcccacatgttttattccatgttgatttcatggttga 4275723  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4275724 gcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 4275823  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||||||| |||||||||||| |||||| ||| |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  4275824 taaaggaccgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 4275904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 43973731 - 43973980
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||| |||||||||    
T  43973731 ggttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgacttcatggttgagcataggggtaggtctaaaactgcctaaaac 43973830  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  43973831 tgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaaggg 43973930  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| ||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  43973931 cagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 43973980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 5137273 - 5137521
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| |||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  5137273 gttagtgtgctgaatagaatagattcattgtgcccacatattttattccttgttgatttcatggttgagcatgggggtaggtctaaaaccgcctaaaact 5137372  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  5137373 gtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggc 5137472  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || ||||||||| ||||||| ||||| ||||||||  ||||||||||||    
T  5137473 agaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaatt 5137521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 17464744 - 17464496
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  17464744 gttagtgtggtgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaacaccgcctaaaact 17464645  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  17464644 gtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 17464545  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    | ||||||||||| || ||| ||||| ||||||||  ||||||||||||    
T  17464544 atgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaatt 17464496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 37727222 - 37727470
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| ||| ||||| ||| ||||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  37727222 gttagtgtgctaaatagaatagattccttgcgcccagatggtttattccttgctgatttcatggttgagcataggggtaggtctaaaaccgcctaaaact 37727321  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||    
T  37727322 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagc 37727421  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||| ||||| || |||||  ||||||||||||    
T  37727422 aggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaatt 37727470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 32535244 - 32534964
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||| |        |||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  32535244 tctaagatatgtttcaaattatggtttttttggttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttga 32535145  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32535144 gcataggggaaggtataaaaccgcctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 32535045  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||| |||||||||| |||||||||||  ||||| ||||||||  ||||||||||||    
T  32535044 tgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaatt 32534964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 30098020 - 30098303
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||     
T  30098020 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttgt 30098119  T
Q  101 gcataggggtaggtt---taaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgat 197  Q
     |||||||||||||    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30098120 acataggggtaggtgatctaaaaccgcctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgat 30098219  T
Q  198 aattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||   |||| ||||||||  ||||||||||||    
T  30098220 aattgaaggaccattttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaatt 30098303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 26274852 - 26274572
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||         ||||||||| | |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||    
T  26274852 tctaagatatgtttcaaattagggtttttttagttagtgtgctgaatagaatagattcattgtgcccacatgtcttattctttgttgatttcatagttga 26274753  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||||  |||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26274752 gcatagacgtaggtctaaaactgcctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataat 26274653  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||  || ||||| |||| |||||||    
T  26274652 tgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaatt 26274572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 29801676 - 29801956
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        ||||||| || | |||||||||||||| || | |||||||| | ||||| ||||||||||||| |||||    
T  29801676 tctaagatatgtttcaaattagggtttttttggttagtatgctgaatagaatagattccttctacccacatgctgtattctttgttgatttcatggttga 29801775  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29801776 gcatagaggtaggtctaaaaccgtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataat 29801875  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||| |||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||||    
T  29801876 tgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaatt 29801956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 45 - 281
Target Start/End: Original strand, 20840865 - 20841101
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||| ||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||||||  | |||||||||||||||||| ||||||||||    
T  20840865 aatataatagatttattgtgcccacatgttttattccttgttgatttcatggttgagcataggggtatatctaaaaccgcctaaaactgccatttctctg 20840964  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttc 244  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  20840965 cgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttc 20841064  T
Q  245 gtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| ||||| |||||| |  ||||||||||||    
T  20841065 gtgagtaggccaaaacacgagcaccaaaagtgtaatt 20841101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 45 - 281
Target Start/End: Complemental strand, 25853475 - 25853239
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  25853475 aatataatagattcctcgtgcccacatgttttattccttgttgatttcatggttgagcatagggataggtctaaaaccgcctaaaactgttatttctctg 25853376  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttc 244  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| ||||| ||||    
T  25853375 cgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcatgaccaatttc 25853276  T
Q  245 gtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| ||||| ||||||||  ||||||||||||    
T  25853275 gtgagtaggccaaaacacgaggaccaaaagtgtaatt 25853239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 23644756 - 23645005
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggt-aggtttaaaaccgcctaaaac 131  Q
    ||||||||| | |||||||| ||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  23644756 gttagtgtgcttaatagaatggatttcttgtgcccacatgttttattccttgttgatttcatggttgagcataggggttaggtctaaaaccgcctaaaac 23644855  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  23644856 tgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaaggg 23644955  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
     ||||||| |||||||||||| ||||| ||||||||  |||||| |||||    
T  23644956 taggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataatt 23645005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 45 - 258
Target Start/End: Complemental strand, 26837601 - 26837388
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||  |||||||||  ||||||| |||||||||||||||||||||||||||||    
T  26837601 aatagaatagattccttgtgtccacatgttttattccttgttgatttcatgattgagcataaaggtaggtctaaaaccgcctaaaactgtcatttctctg 26837502  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttc 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||||||||||||| ||||    
T  26837501 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttataaaagggcaggaccaatttc 26837402  T
Q  245 gtgagtagaccaaa 258  Q
    |||||||| |||||    
T  26837401 gtgagtaggccaaa 26837388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 33 - 258
Target Start/End: Original strand, 41046991 - 41047215
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||| |||| |||||||| |||||||||||||||||    
T  41046991 gttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttgaacatatgggtaggtctaaaaccgcctaaaact 41047090  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||| |    
T  41047091 gccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgttttaaaaggac 41047189  T
Q  233 aggaccagtttcgtgagtagaccaaa 258  Q
    || ||||||||||||||||| |||||    
T  41047190 agaaccagtttcgtgagtaggccaaa 41047215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 24300841 - 24300577
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||| |||||||||||||||||        ||||||| |||| |||| ||||||||| | ||||||||||||||||||| ||||||||||||| |||||    
T  24300841 tctaatatatgtttcaaattagggtttttttggttagtatgttgaataaaatagattcctcgtgcccacatgttttattccttgttgatttcatggttga 24300742  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  24300741 gcatatgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataat 24300642  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgag 265  Q
    ||||| ||| |||| ||||||| ||||||| ||||||||||||||||| ||  ||||| ||||||    
T  24300641 tgaagaaccgttttattctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacgag 24300577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 22425066 - 22424819
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| |||||| |||||||||||||| || |||||  ||| ||||||||||||||||||| |||||||||||||||||    
T  22425066 gttagtgtgctgaatagaatagattccttgtgctcacatgttttattccttattgata-catggttgagcataggggtaggtctaaaaccgcctaaaact 22424968  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |    
T  22424967 gtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggac 22424868  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || ||||||||||| ||||| |  || |||||| |  ||||||||||||    
T  22424867 agaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaatt 22424819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 89 - 281
Target Start/End: Complemental strand, 27393858 - 27393666
Alignment:
Q  89 tttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac 188  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  27393858 tttcatggttgagcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaac 27393759  T
Q  189 aaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||  |||| ||||||||  ||||||||||||    
T  27393758 aaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaatt 27393666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 39555878 - 39556117
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | ||||||||||  ||||||||||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  39555878 ggttagtgtgttgaataaagtggattctttgtagccacatgttttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 39555967  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  39555968 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggaccattttgttctgttttaaaagg 39556066  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  39556067 gcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 39556117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 37727172 - 37726934
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| ||| |||||||||| |||||||| ||||||||||||| ||||||| |||||||||||||| |||||          |||||||    
T  37727172 gttagtgtgttgaataaaatggattctttgtacccacatgctttattcattgtttatttcatggttgagcatagggggtaggt----------ctaaaac 37727083  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  37727082 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaaggg 37726984  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| ||||||||||| || |||||||| ||||||||  ||||||||||||    
T  37726983 cagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaatt 37726934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 41046944 - 41046705
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    ||||| |||||| |||| | |||||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  41046944 ggttaatgtgttgaataaagtagattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 41046855  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  41046854 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 41046756  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||||| | ||| ||||| ||||||||  ||||||||||||    
T  41046755 gcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaatt 41046705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 25853529 - 25853767
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    |||||| |||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  25853529 gttagtctgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 25853618  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||| |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |     
T  25853619 tgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaatga 25853717  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || ||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  25853718 caagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaatt 25853767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 5137224 - 5136985
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    ||||| |||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  5137224 ggttaatgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 5137135  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  5137134 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 5137036  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| ||||| |||||||||| | ||||| ||||||||  ||||||||||||    
T  5137035 gcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaatt 5136985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 31778953 - 31779192
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| || ||||| ||||||| || || ||||||| ||||||||||||||      ||    || |||||||    
T  31778953 ggttagtgtgttgaataaagtggattctttgtaccaacatgctttattccttatttatttcatggttgagcataggggg-----ta----cgtctaaaac 31779043  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    || ||||||||||||||| |||||  | ||||| || ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  31779044 tgacatttctctgcgtttttggagaat-aaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 31779142  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  31779143 caggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 31779192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 20840803 - 20840565
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| ||||| || ||||||| ||||| ||||||| ||||| |||||||| |||||          |||||||    
T  20840803 gttagtgtgttgaataaagtggattctttgtacccacgtgctttattcgttgtttatttcatggttgaacatagggggtaggt----------ctaaaac 20840714  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||||||||||||||||  ||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| ||    
T  20840713 tgtcatttctctgcgtttaaggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaaagg 20840615  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  20840614 caggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 20840565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 24300857 - 24301096
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||  |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  24300857 ggttagtgtgtcgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 24300946  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| | |||||||| ||||||| |||| ||||| |    
T  24300947 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggaccgttttgttttgttttaaaatg 24301045  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| ||||| ||||||||  ||||||||||||    
T  24301046 gcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 24301096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 23644705 - 23644467
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| || ||||| ||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  23644705 gttagtgtgttgaataaagtggattctttgtacctacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 23644616  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    | | |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| ||    
T  23644615 tattatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaatgg 23644517  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| |||||||||||| |||||  |||||||  ||||||||||||    
T  23644516 caggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaatt 23644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 130 - 280
Target Start/End: Complemental strand, 48453144 - 48452995
Alignment:
Q  130 actgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaag 229  Q
    |||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||     
T  48453144 actgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaat 48453046  T
Q  230 ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaat 280  Q
    ||||||||||||||||||||||| ||||| ||||| ||  |||||||||||    
T  48453045 ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaat 48452995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 27393880 - 27394117
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaact 132  Q
    |||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||| |||||||||          ||||||||    
T  27393880 ttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatatggggtaggt----------ctaaaact 27393969  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    || |||||||||||||| |||||  | ||||| || ||||||| | ||||||||||||||||||||||||||||| | |||||||||||| ||||| |||    
T  27393970 gttatttctctgcgtttttggagaat-aaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaaaggc 27394068  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||  |||||||||||| ||||| ||||||||  ||||||||||||    
T  27394069 aggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 27394117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 43973684 - 43973446
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| || || ||||||| || || |||||||||||||          |||||||    
T  43973684 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttatttatttcatggtagaacataggggtaggt----------ctaaaac 43973595  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||| |||| ||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  43973594 tgttatttatctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 43973496  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||  | || ||||||||||||  |||| ||||||||  ||||||||||||    
T  43973495 cataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaatt 43973446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 32535260 - 32535503
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggt-aggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | |  ||||||||| |||||||| ||||||| ||||| |||| || ||||| ||||||||| ||||          ||||||    
T  32535260 ggttagtgtgttgaataaagtgaattctttgtacccacatgctttattccttgtttattttatggttgaacataggggttaggt----------ctaaaa 32535349  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat-----gataattgaaggaccattttgttctgttgta 225  Q
    || |||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||     ||||||||||||||| |||||||||||| ||    
T  32535350 ctatcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatttaatgataattgaaggaccgttttgttctgtttta 32535447  T
Q  226 aaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  32535448 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 32535503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 54 - 281
Target Start/End: Complemental strand, 30104703 - 30104487
Alignment:
Q  54 gattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctg 152  Q
    |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||||||||||||||||||||| |     
T  30104703 gattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaactgtcatttctctgcgttttta 30104614  T
Q  153 gagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtag 252  Q
    ||   | ||||| || ||||||||||||||||||||||||||||||||||||||||| || | || |||| |||||||||||||||| ||||||||||||    
T  30104613 gataat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttctattttgttttaaaagggcaggaccaatttcgtgagtag 30104516  T
Q  253 accaaatcacgaggattaaaagtgtaatt 281  Q
      |||| ||||||||  ||||||||||||    
T  30104515 gtcaaaacacgaggaccaaaagtgtaatt 30104487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 26837657 - 26837895
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||||||||||||      |||    | |||||||    
T  26837657 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggg-----taa----gtctaaaac 26837747  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||| ||| |||||  | ||||| || |||||||| ||||||||||||||||||||| ||||| |||| ||||||||| || | ||||||    
T  26837748 tgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgaccgttttgttctatt-ttaaaggg 26837845  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| ||||||||||| ||||| ||||| ||||||||  ||||||||||||    
T  26837846 cagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaatt 26837895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 281
Target Start/End: Original strand, 22425138 - 22425353
Alignment:
Q  56 ttctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctgga 154  Q
    |||||||| |||||||||||||||| ||||| ||||||| |||||||||||||| ||| |          |||||| | | |||||||||||||| ||||    
T  22425138 ttctttgtacccacatgttttattccttgtttatttcatggttgagcatagggggtagat----------ctaaaaatctaatttctctgcgtttttgga 22425227  T
Q  155 gtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagac 254  Q
    |  | ||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| || ||||||| |||||| ||||||||||| |    
T  22425228 gaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtaccgttttgttctgttttacaagggcatgaccagattcgtgagtaggc 22425326  T
Q  255 caaatcacgaggattaaaagtgtaatt 281  Q
    | || ||||||||  ||||||||||||    
T  22425327 cgaaacacgaggaccaaaagtgtaatt 22425353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 252
Target Start/End: Original strand, 26274873 - 26275077
Alignment:
Q  37 gtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtc 135  Q
    ||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          |||||||||||    
T  26274873 gtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaactgtc 26274962  T
Q  136 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcagg 235  Q
    ||||||||||| || |||||  | ||||| || |||||||||||||| |||||||||||||||||||| ||||| |||| ||||||| |||||||| |||    
T  26274963 atttctctgcggttttggagaat-aaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggaccgttttattctgttttaaaagggtagg 26275060  T
Q  236 accagtttcgtgagtag 252  Q
    |||||||||||||||||    
T  26275061 accagtttcgtgagtag 26275077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 17464792 - 17465032
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggt-aggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| ||||| || ||||||| ||||| ||||||| ||||||||||||||| ||||          ||||||    
T  17464792 ggttagtgtgttgaataaagtggattctttgtacccacttgatttattccttgtttatttcatggttgagcataggggttaggt----------ctaaaa 17464881  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa-atgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaag 229  Q
    ||||||||||||||| ||| |||||  | ||||| || |||||||| |||| |||||||||||||||||||||||||||| ||||||||| || ||||||    
T  17464882 ctgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaag 17464980  T
Q  230 ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||   |||||||||| || |||| ||||| ||||||||  |||| |||||||    
T  17464981 ggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaatt 17465032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 29801473 - 29801361
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 268  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||||  ||||| ||||| ||     
T  29801473 ggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgac 29801374  T
Q  269 taaaagtgtaatt 281  Q
     ||||||||||||    
T  29801373 caaaagtgtaatt 29801361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 23228427 - 23228547
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| |||||||||| || || |||||||||||| |||||     
T  23228427 aaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgtgagtaggccaaaa 23228525  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    |||| |||  ||||||||||||    
T  23228526 cacggggaccaaaagtgtaatt 23228547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 25612396 - 25612517
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||||||||||||||||||||||||||||| || |||  ||||||||| || |||||||||||||||| ||||||||||||  ||||     
T  25612396 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaa 25612495  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  ||||||||||||    
T  25612496 cacgaggaccaaaagtgtaatt 25612517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 51473542 - 51473433
Alignment:
Q  172 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 271  Q
    ||||| |||| |||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||| |||||||| ||||||||| ||||||||  ||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  272 aagtgtaatt 281  Q
    ||||||||||    
T  51473442 aagtgtaatt 51473433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 2323658 - 2323466
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||  |       |||||||||| | |||||| ||||||| |||| |||||||||| ||||| ||||| ||||||| |||||    
T  2323658 tctaagatatgtttcaaattaacatttttttggttagtgtgctgaatagagtagattccttgtacccacatgttctattccttgtttatttcatggttga 2323559  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
     ||||    ||||| |||||  ||||||||||||||||| || | |||||||||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  2323558 acata----taggtctaaaattgcctaaaactgtcatttatccgtgtttctggagtt-gaaaataggaggtaggactaaaattgcaaaaaacatgata 2323466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 37075980 - 37076133
Alignment:
Q  46 atagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    ||||| ||||||||||||  ||||||| ||||||| ||||| ||||||| |||||||||||||| || || |||||| ||||||||||| |||||||||     
T  37075980 atagagtagattctttgtatccacatgctttattccttgtttatttcatggttgagcataggggataagtctaaaactgcctaaaactgccatttctcta 37076079  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    ||||||| |||||  ||||||| ||||| ||| ||||||| || ||| ||||||    
T  37076080 cgtttctagagttaaaaaatagaaggtaagactaaaaatgtaaaaaacatgata 37076133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 181
Target Start/End: Complemental strand, 50900772 - 50900637
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||||| || |||| |||| |||||||| ||||||| ||||| ||||||| ||||||| || |||||||| |||||| |||||||||||||||||||||     
T  50900772 aatagagtatattccttgtacccacatgctttattccttgtttatttcatggttgagcttatgggtaggtctaaaactgcctaaaactgtcatttctcta 50900673  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaa 181  Q
     |||||| ||| |||||||||| ||||||||| ||||    
T  50900672 tgtttctagag-ttgaaaatagaaggtaggactaaaa 50900637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 32697128 - 32697226
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 267  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||  ||| | |||||||||||| | ||| ||||||||    
T  32697128 ggtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgagga 32697226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 50116828 - 50116949
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||||||||| ||||||||||||||||| |||| |||| ||||||||| ||  ||||||||| ||||| |||||||||||   ||||     
T  50116828 aaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaa 50116927  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||| ||||||||||||    
T  50116928 cacgaggatcaaaagtgtaatt 50116949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 51474753 - 51474874
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||||||||||||||||||||||||||| | |||||| |||||||| |||| |||||||||| ||||| |||||||||||  |||||     
T  51474753 aaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaa 51474852  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    |||| | |  ||||||||||||    
T  51474853 cacgggaaccaaaagtgtaatt 51474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 8873943 - 8873784
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||| | |||||| ||||||  || | | ||| || ||||||| ||||| ||||||| |||||||||||||| |||||  ||||  |||||||||    
T  8873943 gttagtgtgctgaatagagtagatttcttatactcacgtgctttattccttgtttatttcatggttgagcatagggggtaggtccaaaattgcctaaaac 8873844  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 192  Q
    ||||||||||||||||||||| || |||||||||||||||| ||| |||| ||||| ||||    
T  8873843 tgtcatttctctgcgtttctgaag-ttgaaaataggaggtaagactaaaactgcaaaaaaa 8873784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 18010176 - 18010272
Alignment:
Q  172 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 268  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||| | |||| |||||||||||||| ||| || ||||||    
T  18010176 aggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaaaacaggaggat 18010272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 198
Target Start/End: Original strand, 27199995 - 27200150
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||| | |||||| |  |||| ||||||||||||| ||||||| ||||| ||||||| |||||||||| |||||||||          ||||| |    
T  27199995 gttagtgtgctgaatagagtgaattccttgtgcccacatgatttattccttgtttatttcatggttgagcataaggggtaggt----------ctaaacc 27200084  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  27200085 tgtcatttctctgcgtttctggag-ttgaaaataggaggtatgactaaaactgcaaaaaacatgata 27200150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 25420560 - 25420681
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||| |||| || |||||||||  || || ||||||||||||  ||||     
T  25420560 aaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaaaa 25420659  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
     |||| ||| ||||||||||||    
T  25420660 tacgatgatcaaaagtgtaatt 25420681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 8873989 - 8874138
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| |||| ||||||||||| ||||| ||||||| ||||| |||||||||| ||          |||||||    
T  8873989 ggttagtgtgttgaataaagtggattctttgtacccatatgttttattccttgtttatttcatggttgaacataggggtaagt----------ctaaaac 8874078  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    |||||||||| ||||||||||||| |||||||||| |||||| || |||| ||||| |||||    
T  8874079 tgtcatttct-tgcgtttctggag-ttgaaaatagaaggtagaactaaaactgcaaaaaaaa 8874138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 55192328 - 55192222
Alignment:
Q  65 cccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaa 163  Q
    |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||||||||||||||||||||||||||| |||||||    
T  55192328 cccacatgctttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaactgtcatttctctgcgtttctggag-ttgaaaa 55192240  T
Q  164 taggaggtaggacgaaaa 181  Q
    ||||||||||||| ||||    
T  55192239 taggaggtaggactaaaa 55192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 192
Target Start/End: Original strand, 49408087 - 49408233
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||| |||||||||||| |||||||| ||||||  ||||| ||||||| |||||||||||| ||||||          ||||||||    
T  49408087 gttagtgtgctgaatagagtagattctttgtacccacatgctttattgcttgtttatttcatggttgagcataggtgtaggt----------ctaaaact 49408176  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 192  Q
    | ||||||| ||||||||||||| ||||||||  |||||||||| |||| ||||| ||||    
T  49408177 gccatttctttgcgtttctggag-ttgaaaat--gaggtaggactaaaactgcaaaaaaa 49408233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 37220674 - 37220562
Alignment:
Q  169 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 268  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||| |||||| ||| || |  | | |||||||| |||||  |||||||     
T  37220674 ggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggac 37220575  T
Q  269 taaaagtgtaatt 281  Q
     ||||||||||||    
T  37220574 caaaagtgtaatt 37220562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 37075932 - 37075781
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | ||||| |||| |||||||| ||||||| || || ||||||| | |||||||||||| |||||          ||||||    
T  37075932 ggttagtgtgttgaataaagtggattcattgtacccacatgctttattccttctttatttcatggctgagcatagggggtaggt----------ctaaaa 37075843  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    | ||||||||||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||    
T  37075842 cggtcatttctctgcgtttctggag-ttgaaaataagaggtaggactaaaactgcaaaaaaaa 37075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 43678539 - 43678464
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||| || |||| | ||||||| |||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  43678539 ggttagtgtattgaataaagtagattccttgtacccacatgttttattctttgtttatttcatagttgagcatagg 43678464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 46013724 - 46013799
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | |||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  46013724 ggttagtgtgctgaataaagtagattctttgtacccacatgttttattctttgtttatttcatggttgagcatagg 46013799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 51473157 - 51473232
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  51473157 ggttagtgtgttgaataaagtagattcattgtacccacatgttttattctttgtttatttcatggttgagcatagg 51473232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 45966049 - 45965943
Alignment:
Q  175 acgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaag 274  Q
    ||||||||||||||| |||||||||| |||||||  ||||||| |||| |||||| ||||||  |  ||||||||||  ||||| ||||||||  |||||    
T  45966049 acgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaacacgaggaccaaaag 45965950  T
Q  275 tgtaatt 281  Q
    |||||||    
T  45965949 tgtaatt 45965943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 181
Target Start/End: Complemental strand, 49408037 - 49407900
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaact 132  Q
    |||||||||| |||| | | ||||| |||| |||||||||||||||| ||||| ||||||| ||| |||||| |||||||||          |||||| |    
T  49408037 ttagtgtgttgaataaagtggattccttgtacccacatgttttattccttgtttatttcatggtttagcatagggggtaggt----------ctaaaatt 49407948  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 181  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||| ||||    
T  49407947 gtcatttctctgcgtttttggag-ttgaaaataggaggtatgactaaaa 49407900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 44676774 - 44676849
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| | || |||||||||||||||| ||||| ||||||||||||||||||||    
T  44676774 ggttagtgtgctgaataaagtagattcctagtacccacatgttttattctttgtttatttcatagttgagcatagg 44676849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 49720673 - 49720748
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  49720673 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 49720748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 51828842 - 51828917
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  51828842 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 51828917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 41998473 - 41998399
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||| | |||| | |||||||||||| |||||||||||||||  ||||| ||||||| ||||||||||||    
T  41998473 gttagtgtgatgaataaagtagattctttgtacccacatgttttattatttgtttatttcatggttgagcatagg 41998399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 29801660 - 29801587
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||||||||    
T  29801660 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcata 29801587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 40838954 - 40839027
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||    
T  40838954 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattccttgtttatttcatggttgagcata 40839027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 49951790 - 49951717
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||    
T  49951790 ggttagtgtgctaaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcata 49951717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 250
Target Start/End: Complemental strand, 55389765 - 55389641
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||  ||      
T  55389765 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 55389667  T
Q  225 aaaagggcaggaccagtttcgtgagt 250  Q
    |||| || ||||||| ||||||||||    
T  55389666 aaaaaggtaggaccattttcgtgagt 55389641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 34104861 - 34104806
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  34104861 tagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 34104806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 34104970 - 34105025
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  34104970 tagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 34105025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 36701411 - 36701554
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaactgtcatttctct 143  Q
    |||| ||| ||||| |||| | |||||| ||||||| ||||| ||||||||| |||||||| |||||||||          ||||||||| ||||||| |    
T  36701411 aataaaattgattccttgtactcacatgctttattccttgtttatttcatagctgagcatatggggtaggt----------ctaaaactgccatttctat 36701500  T
Q  144 gcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    | |||||||||||| |||||||||||||| ||| |||| ||||| ||| ||||||    
T  36701501 gtgtttctggagtt-gaaaataggaggtatgactaaaactgcaaaaaacatgata 36701554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 39010375 - 39010450
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| |||| |||| |||| |||||||||||||||| ||||| |||| || ||||||||||||    
T  39010375 ggttagtgtgctgaataaaataaattccttgtacccacatgttttattctttgtttattttatggttgagcatagg 39010450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 47431941 - 47431866
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||  |||||||||||||||| ||||| ||||||| ||||||||||||    
T  47431941 ggttagtgtgctgaataaagtagattcattgcacccacatgttttattctttgtttatttcatggttgagcatagg 47431866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 23227370 - 23227320
Alignment:
Q  172 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 222  Q
    ||||||||||||||||||||||||| ||||| ||||| | |||||||||||    
T  23227370 aggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgtt 23227320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 27199946 - 27199856
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaac 121  Q
    |||||||||||| |||| | | ||||| || | |||||||| ||||||| ||||| ||||||| |||||||||| ||||||||| ||||||    
T  27199946 ggttagtgtgttgaatacagttgattccttttccccacatgctttattccttgtttatttcatggttgagcatagggggtaggtctaaaac 27199856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 37222041 - 37222111
Alignment:
Q  211 ttttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||| ||||| |||||||||| ||| ||||||||  |||| ||||||||  ||||||||||||    
T  37222041 ttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaatt 37222111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 50662798 - 50662890
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  50662798 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagggagctaggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 50662890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 32730775 - 32730812
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  32730775 ctaaaactgtcatttctgtgcgtttctggagtttgaaa 32730812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 33412332 - 33412385
Alignment:
Q  56 ttctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg 109  Q
    |||||||| |||||||| ||||||| ||||| ||||||| ||||||||||||||    
T  33412332 ttctttgtacccacatgctttattccttgtttatttcatggttgagcatagggg 33412385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 51828343 - 51828436
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  51828343 ctaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacaattttgttc 51828436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 37847123 - 37847267
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||| |  ||||||| ||||||| ||||| ||||||| ||||||||||| ||||| ||          ||||||     
T  37847123 gttagtgtgttgaataaagtggattctttatatccacatgctttattccttgtttatttcatggttgagcatagtgggtaagt----------ctaaaat 37847212  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    |||||||||||||| |||||| || ||||||||||||| |||||| |||| |||||    
T  37847213 tgtcatttctctgcatttctgaag-ttgaaaataggagataggactaaaactgcaa 37847267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 40275255 - 40275187
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  40275255 ctaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaa 40275187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 330158 - 330213
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||||||||| |||| || ||||||||||||    
T  330158 tagattccttgtacccacatgatttattcattgtttattttatggttgagcatagg 330213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 2044495 - 2044440
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||||||||| ||||||    
T  2044495 tagattccttgtacccacatgatttattccttgtttatttcatagttgaacatagg 2044440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 25419242 - 25419179
Alignment:
Q  189 aaaaatgataattgaa-ggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagta 251  Q
    |||||||||||||||| ||||  |||||||||||| ||||||||||| || | |||||||||||    
T  25419242 aaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatttcgtgagta 25419179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 32730613 - 32730558
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  32730613 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 32730558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 43222606 - 43222559
Alignment:
Q  60 ttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  43222606 ttgtacccacatgttttattccttgtttatttcatggttgagcatagg 43222559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 43222775 - 43222842
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 192  Q
    ||||||||||||||| | |||||||||||||||  |||||||| ||| |||| |||| ||||| ||||    
T  43222775 ctaaaactgtcatttttgtgcgtttctggagttgaaaaatagggggtgggactaaaactgcaaaaaaa 43222842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 47431857 - 47431790
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 192  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||    
T  47431857 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaa 47431790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 49720595 - 49720540
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  49720595 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 49720540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 50662734 - 50662789
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||| ||||||||| ||||| ||||||| ||||||||||||    
T  50662734 tagattccttgtacccacacgttttattctttgtttatttcatggttgagcatagg 50662789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 51828117 - 51828055
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||| | ||||||||||||| ||||||||| |||| |||||| ||||||||||    
T  51828117 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagggagataggactaaaaatgcaa 51828055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 51828181 - 51828126
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  51828181 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 51828126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 51828259 - 51828334
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| ||||||| |||||||| ||||  ||||||| ||||||||||||    
T  51828259 ggttagtgtgctgaataaagtagattccttgtacccacatcttttattccttgtgtatttcatggttgagcatagg 51828334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 14654513 - 14654567
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| |||||||||||    
T  14654513 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatag 14654567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 14654577 - 14654639
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||| | ||||||||||||||| ||||  ||||| |||||| |||| |||||    
T  14654577 ctaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaa 14654639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 40839038 - 40839100
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  40839038 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaa 40839100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 43222550 - 43222488
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||| | | |||||||||||||  |||||||| |||||||  ||||||||||    
T  43222550 ctaaaactgtcatttttgtacgtttctggagttgaaaaatagggggtaggattaaaaatgcaa 43222488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 44676696 - 44676642
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| |||||||||||    
T  44676696 tagattcattgtacccacatgatttattccttgtttatttcatggttgagcatag 44676642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 44676858 - 44676950
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaatag-gaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||| | ||||||||||||| |||||||||| ||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  44676858 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagagagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgttc 44676950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 49720531 - 49720469
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||| | ||||||||||||||| ||||  ||||| |||||| |||| |||||    
T  49720531 ctaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaa 49720469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 50900833 - 50900907
Alignment:
Q  35 tagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg 109  Q
    |||||||||||||| | | ||||| |||| |||||||| ||| ||  ||||| ||||||| ||||||||||||||    
T  50900833 tagtgtgttcaataaagtggattccttgtacccacatgctttctttcttgtttatttcatggttgagcatagggg 50900907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 50900914 - 50900975
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    |||||||||  |||||| ||||||| ||||||| |||||||||||||||||| |||| |||||    
T  50900914 ctaaaactgcaatttctttgcgtttatggagtt-gaaaataggaggtaggacaaaaactgcaa 50900975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 52236976 - 52236935
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 167  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  52236976 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 52236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 52237203 - 52237327
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||| |||||||| |||||| ||||   |||| |||||| |||| ||||| ||| || |||||| | |||| ||||||||| | | |    
T  52237203 ctaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaacat-ataatttagggacgattttgttc-gattt 52237300  T
Q  225 aaaag-ggcaggaccagtttcgtgagt 250  Q
    ||||| || ||||||| ||||||||||    
T  52237301 aaaagaggtaggaccattttcgtgagt 52237327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 330080 - 330007
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||| | |||| | ||||||| |||| | |||||||||||||| ||||| | ||||| ||||||||||    
T  330080 ggttagtgtgctgaataaagtagattccttgtacgcacatgttttattccttgtttacttcatggttgagcata 330007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 14654435 - 14654366
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgag 101  Q
    |||||||||| | |||| | ||||||| |||  |||||||||||||||| ||||| ||||||| ||||||    
T  14654435 ggttagtgtgctgaataaagtagattccttgcacccacatgttttattctttgtttatttcatggttgag 14654366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 250
Target Start/End: Complemental strand, 22370757 - 22370632
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    |||||||||| |||||| ||||||||||||||| || |  ||||| |||||| |||| ||||| ||||   ||| || | |||| ||||||||  |||      
T  22370757 ctaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttta 22370658  T
Q  225 aaaagggcaggaccagtttcgtgagt 250  Q
    |||| || ||||||| ||||||||||    
T  22370657 aaaaaggtaggaccattttcgtgagt 22370632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 30098001 - 30097940
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcat 94  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| |||||||    
T  30098001 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcat 30097940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 36701268 - 36701224
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagg 170  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||||    
T  36701268 ctaaaattgtcatttatctgcgtttctggag-ttgaaaataggagg 36701224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 40838812 - 40838775
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  40838812 ctaaaactgtcatttctgtgcgtttctggagttggaaa 40838775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 46013648 - 46013591
Alignment:
Q  50 aatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||| |||| |||||||| ||||||| || || ||||||| ||||||||||||    
T  46013648 aatagattcattgtacccacatgatttattctttatttatttcatggttgagcatagg 46013591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 46013808 - 46013901
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  46013808 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 46013901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 52237042 - 52236985
Alignment:
Q  50 aatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||  |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  52237042 aatagatttcttgtacccacatgctttattccttgtttatttcatggttgagcatagg 52236985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 52375487 - 52375450
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  52375487 ctaaaactgtcatttctatgcgtttctggagttagaaa 52375450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 52375717 - 52375754
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  52375717 ctaaaactgtcatttctgtgcgtttctggagttggaaa 52375754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 32695817 - 32695761
Alignment:
Q  172 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaa 228  Q
    ||||| |||| |||||||||||| ||||| | ||||| ||||||||||||| |||||    
T  32695817 aggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaa 32695761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 34105034 - 34105102
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    ||||||||||||||||| |||||||||| |||| ||||  ||||| | |||| |||| ||||| |||||    
T  34105034 ctaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaa 34105102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 38535539 - 38535471
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||| | |||| | ||||||  |||| |||||||||||||||| ||||| ||||||| |||||    
T  38535539 ggttagtgtgctgaataaagtagatttcttgtacccacatgttttattctttgtttatttcatggttga 38535471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 55389983 - 55390039
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 181  Q
    ||||||||||||||||| ||||||| ||||||| ||||   ||||||||||| ||||    
T  55389983 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaa 55390039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 21856296 - 21856047
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||||||||||||| |||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  21856296 ggttagtgtgctgaatagaatagattccttgtgctcacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaac 21856197  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21856196 tgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 21856097  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| |||| ||||||||  ||||||||||||    
T  21856096 caggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaatt 21856047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 39154312 - 39154560
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| |    
T  39154312 gttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaatt 39154411  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||    
T  39154412 gtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagc 39154511  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  39154512 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 39154560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 15173355 - 15173633
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| | |||||||||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  15173355 tctaagatatgtttcaaattagg-tttttttggttagtgtgcttaatagaatagattctttgtgcccacatgttttatttcttgttgatttcatggttga 15173453  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15173454 gcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 15173553  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||||||  ||||||||||||    
T  15173554 tgaaggaccattttgttctgttttaaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaatt 15173633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 50970562 - 50970283
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||||| |||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||    
T  50970562 tctaagatatgtttcaaattagg-tttttttggttagtgtgttgaatagaatagattcattgtgcccacatgttttattgcttgttgatttcatggttga 50970464  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50970463 gcataggggtaggtctaaaaccgccaaaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataat 50970364  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||| | |||||| |||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  50970363 tgaaggaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 50970283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 15646444 - 15646197
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactg 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  15646444 ttagtgtgataaatagaatagattctttgtgcccacatgttttattccttgttgatttcatagtttagcataggggtaggtctaaaaccgcctaaaactg 15646345  T
Q  134 tcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggca 233  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  15646344 tcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgttttaaaagggca 15646245  T
Q  234 ggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
     |||||||||||||||||| ||||| ||||||||  |||||| |||||    
T  15646244 tgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataatt 15646197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 33144203 - 33143925
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgtt-gatttcatagttg 99  Q
    |||||||||||||||||||||||        |||||||||| | ||| |||||||||| ||||||||||||||||||||| ||||| |||||||| ||||    
T  33144203 tctaagatatgtttcaaattagggtttttttggttagtgtgctgaattgaatagattccttgtgcccacatgttttattccttgtttgatttcatggttg 33144104  T
Q  100 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 199  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  33144103 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataa 33144004  T
Q  200 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgta 278  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  |||||||||    
T  33144003 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 8678826 - 8678546
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||         ||||||||| | |||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||    
T  8678826 tctaagatatgtttcaaattagggttttttttgttagtgtgctgaatagaatagattcattgtgcccacatgttttatttcttgttgatttcatggttga 8678727  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  8678726 gcataggggtatgtctaaaaccgcctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataat 8678627  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  8678626 tgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 8678546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 29307212 - 29307482
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||||||       |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  29307212 tctaagatatgtttcaaattaggatttttttggttagtgtgttgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttga 29307311  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307312 gcataggggtaggt----------ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 29307401  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||  ||||||| ||||    
T  29307402 tgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaatt 29307482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 18984379 - 18984659
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||| |        |||||||||| | |||||||||||||| || |||||||||||||||||| ||||||||||||| |||||    
T  18984379 tctaagatatgtttcaaattatggtttttttggttagtgtggtgaatagaatagattccttatgcccacatgttttattccttgttgatttcatggttga 18984478  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||||||| |||| |||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984479 gcataggggaaggtctaaaaccgcctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 18984578  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||| ||| ||||  ||||||||||||    
T  18984579 tgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaatt 18984659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 17433506 - 17433755
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||| ||||||||| |||||| |||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||| |||||||    
T  17433506 ggttagtgtgctgaataaaatagattccttgtgcacacatgttttattccttgtttatttcatggttgagcataggggtaggtctaaaaccgtctaaaac 17433605  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  17433606 tgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 17433705  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || |||||||||||||||||| ||| | ||||||||  ||||||||||||    
T  17433706 catgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaatt 17433755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 29869910 - 29870159
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||||||||||||| ||||||||||| ||||||||| ||||| ||||||| |||||||||| |||||||| ||||||||||||||||    
T  29869910 ggttagtgtgctgaatagaatagattccttgtgcccacaagttttattccttgttaatttcatggttgagcatatgggtaggtctaaaaccgcctaaaac 29870009  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||    
T  29870010 tgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatgg 29870109  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||| ||||||| ||||| ||||||||  ||||||||||||    
T  29870110 caggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaatt 29870159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 45 - 281
Target Start/End: Complemental strand, 5540057 - 5539821
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| ||    
T  5540057 aatagaatagattccttgtgtccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaactgccatttctatg 5539958  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttc 244  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||    
T  5539957 cgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttc 5539858  T
Q  245 gtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||| ||||| ||||||||  ||||||||||||    
T  5539857 gtgagtaggccaaaacacgaggaccaaaagtgtaatt 5539821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 5962863 - 5962583
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||| |||||||||||        |||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  5962863 tctaagatatgattcaaattagggtttttttggttagtgtgttgaatagaatagattctttgtgcccacatgttttatttcttgttgatttcatggttga 5962764  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
     |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  5962763 tcataggggtaagtttaaaaccgcctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagt 5962664  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||| |||||||||||| ||||||||| ||||||||||||||| ||||||| | ||||||||  |||| |||||||    
T  5962663 tgaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaatt 5962583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 4636232 - 4636511
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        ||||||| || | |||| ||||||||| ||||||||||||||||||||| |||||||||||||  ||||    
T  4636232 tctaagatatgtttcaaattagg-gttttttggttagtatgatgaatataatagattccttgtgcccacatgttttattccttgttgatttcatgtttga 4636330  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4636331 gcataggggtaggtctaaaatcgcataaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataat 4636430  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||| | |||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||||||    
T  4636431 tgaaggatcgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 4636511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 26859313 - 26859064
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggg-gtaggtttaaaaccgcctaaaac 131  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||| || ||| || ||||||||||||||||    
T  26859313 gttagtgtgctgaatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttaagcatatggagtatgtctaaaaccgcctaaaac 26859214  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    | | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||    
T  26859213 tattacttctctgcgtttctggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatgg 26859114  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||| ||||| ||||| ||| ||||  ||||||||||||    
T  26859113 caggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaatt 26859064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 17112535 - 17112287
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  17112535 ggttagtgtgctgaatagaatagattccttctgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaac 17112436  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| || ||||||||    
T  17112435 tatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctattttaaaaggg 17112336  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |   |||| |||| |||||||| |||| || ||| |  ||||||||||||    
T  17112335 c-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaatt 17112287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 9019233 - 9019503
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||| ||||||||||||        |||||||||| | |||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||    
T  9019233 tctaagatatatttcaaattagggtttttttggttagtgtgctgaatagaatagattccttgtgtccacatgttttattccttgttgatttcatggttga 9019332  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    ||||||||| ||||          |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9019333 gcataggggcaggt----------ctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 9019422  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||| |||||||||||| ||||| ||||| |||||||| ||||||||  |||| ||||||||  ||||||||||||    
T  9019423 tgaatgaccgttttgttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaatt 9019503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 29307196 - 29306958
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| ||| |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||||||||          |||||||    
T  29307196 ggttagtgtgttgaataaaatggattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggtaggt----------ctaaaac 29307107  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||     
T  29307106 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagga 29307008  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || |||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  29307007 catgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaatt 29306958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 5540121 - 5540358
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||||| |||| | | |||||||||| ||||||| |||||||| ||||| ||||||| |||||||||||||||||||          ||||||||    
T  5540121 gttagtgtgttgaataaagtggattctttgtacccacatattttattccttgtttatttcatggttgagcataggggtaggt----------ctaaaact 5540210  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| |    
T  5540211 gtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttcttctgttttaaaaggac 5540309  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  5540310 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 5540358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 18984363 - 18984124
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggt-aggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | |  ||||||||| |||||||| ||||||| ||||| ||||||| ||||||||||||||| ||||          ||||||    
T  18984363 ggttagtgtgttgaataaagtgaattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggttaggt----------ctaaaa 18984274  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    || |||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  18984273 ctatcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagg 18984175  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  18984174 gcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaatt 18984124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 33144221 - 33144459
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||| ||||||| ||||||||          |||||||    
T  33144221 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttaagcatagagggtaggt----------ctaaaac 33144310  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  33144311 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtccattttgttctgttttaaaaggg 33144409  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  33144410 caggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 33144459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 50970580 - 50970818
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    |||||| |||| |||| | | |||| ||||| | |||||||||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  50970580 gttagtatgttgaataaagtggattatttgtactcacatgttttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 50970669  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  50970670 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 50970768  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||| ||||| ||||| ||||||||  ||||||||||||    
T  50970769 caggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaatt 50970818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 8678844 - 8679081
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| |||| || |||||||||||||| |||||          |||||||    
T  8678844 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttattttatggttgagcatagggggtaggt----------ctaaaac 8678933  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||| ||| |||||  | ||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  8678934 tgtcatttctctgcatttttggagaat-aaaat-ggaggtaggacgaaaaatgcaacaaaaatgataattgaatgacctttttgttctgttttaaaaggg 8679031  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||| ||||||||| ||||| ||||||||  ||||||||||||    
T  8679032 caggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaatt 8679081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 5962880 - 5963118
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | ||| |||||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  5962880 gttagtgtgttgaataaagtggatgctttgtacccacatgttttattcgttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 5962969  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||  ||||||||| || ||||||||    
T  5962970 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagactgttttgttctattttaaaaggg 5963068  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || || ||||||||||||||| ||||| ||||||||  ||||||||||||    
T  5963069 catgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 5963118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 15173339 - 15173101
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||| | |||||||||||||| |||||          |||||||    
T  15173339 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcttggttgagcatagggggtaggt----------ctaaaac 15173250  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||||||  || ||||||||    
T  15173249 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttcaattttaaaaggg 15173151  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||| |||||||||||||| ||||| ||||||||  ||||||||||||    
T  15173150 caggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 15173101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 15646493 - 15646735
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata----ggggtaggtttaaaaccgccta 127  Q
    |||||||||||| |||| | | ||||||| || |||||||| ||||||| ||||| ||||||| ||||| ||||    |||||||||          |||    
T  15646493 ggttagtgtgttgaataaagtggattcttcgtacccacatgctttattctttgtttatttcatggttgaacataaaatggggtaggt----------cta 15646582  T
Q  128 aaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaa 227  Q
    |||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  15646583 aaactgtcatttctctgcgtttttggagaat-aaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaa 15646681  T
Q  228 agggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||| |||| ||||||||||||||| ||||| ||||||||  ||||||||||||    
T  15646682 agggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 15646735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 21856344 - 21856583
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    ||||||| |||| |||| | | |||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  21856344 ggttagtctgttgaataaagtggattctttgtacccacatgttttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 21856433  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||||| |    
T  21856434 ctgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggaccgttttgttctgttttaaaaag 21856532  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||| ||||||| ||||||| ||||| ||||||||  ||||||||||||    
T  21856533 gcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaatt 21856583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 29869864 - 29869625
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| | || ||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  29869864 ggttagtgtgttgaataaagtggattctttgtactcatatgatttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 29869775  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  29869774 ctgtcatttctctgcgtttttggagaat-aaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgttttaaaagg 29869676  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  29869675 gcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaatt 29869625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 17433460 - 17433221
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  17433460 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggataggt----------ctaaaa 17433371  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  17433370 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagg 17433272  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| |  ||||||| ||||||| ||||| || |||||  ||||||||||||    
T  17433271 gcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaatt 17433221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 26859362 - 26859599
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | ||||||||||  ||||||| ||||||| ||||| ||||||| ||||| |||||| |||||||          |||||||    
T  26859362 gttagtgtgttgaataaagtggattctttgtatccacatgctttattccttgtttatttcatggttgaacataggaggtaggt----------ctaaaac 26859451  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    | | |||||||||||||| |||||  |  |||| || ||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  26859452 tattatttctctgcgtttttggagaat--aaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtattgttctgttttaaaaggg 26859549  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||  |||||||||||||| ||||| ||||||||| ||||||||||||    
T  26859550 caggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaatt 26859599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 281
Target Start/End: Complemental strand, 9019213 - 9018978
Alignment:
Q  36 agtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgt 134  Q
    |||||||| |||| | | |||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||| ||| |          |||||| | |    
T  9019213 agtgtgttgaataaagtggattctttgtacccacatgttttattccttgtttatttcatggttgagcatagggggtagat----------ctaaaaatat 9019124  T
Q  135 catttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcag 234  Q
     |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||    
T  9019123 aatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgaccgttttgttctgttttaaaagggcag 9019025  T
Q  235 gaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
     ||||||||||| ||||| ||||| ||||||||  ||||||||||||    
T  9019024 aaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaatt 9018978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 39154263 - 39154024
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||||||||||||  || |         |||||||    
T  39154263 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgagcataggggatgggt---------ctaaaac 39154173  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    |||||||||| ||||||| |||||  | | ||| || |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||    
T  39154172 tgtcatttctatgcgtttttggagaat-agaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggaccgttttgttctgttttaaaaggg 39154074  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || || ||||||||||||||  ||||| || || ||  ||||||||||||    
T  39154073 catgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaatt 39154024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 52268416 - 52268295
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || ||||||||||||| ||||||||||||||||| |||| |||  |||||||||||| |||||||||||||||| ||||||||| || |||||     
T  52268416 aaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 52268317  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
     |||||||  ||||||||||||    
T  52268316 tacgaggaccaaaagtgtaatt 52268295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 17088425 - 17088243
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    ||||||||||||||||||||| |        |||||||||| | |||||| ||||||| |||| || ||||||||||||| ||||| ||||||| |||||    
T  17088425 tctaagatatgtttcaaattaaggtttttttggttagtgtgctgaatagagtagattccttgtacctacatgttttattccttgtttatttcatggttga 17088326  T
Q  101 gcatagg-ggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    ||||||| |||||||          ||||||||| ||||||||||| |||||| || |||||||||||||||||||| |||| ||||| |||||    
T  17088325 gcataggaggtaggt----------ctaaaactgccatttctctgcatttctgaag-ttgaaaataggaggtaggactaaaattgcaaaaaaaa 17088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 222
Target Start/End: Complemental strand, 4636215 - 4636037
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| ||||| |||||||| |||||          |||||||    
T  4636215 gttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggttgaacatagggggtaggt----------ctaaaac 4636126  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 222  Q
    |||||||||||||||||| || ||  | ||||| || ||||| || ||||||||||||||||||||| ||||||||||  |||||||||||    
T  4636125 tgtcatttctctgcgtttttgaagaat-aaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggacc-gtttgttctgtt 4636037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 45048429 - 45048594
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||||| | ||||  |||| |||||||| ||||||| || || ||||| | ||| |||||| ||||||||| |||||| || | |||    
T  45048429 ggttagtgtgttgaatagagtcgatttcttgtacccacatgctttattcgttatttatttcgtggttaagcatagggggtaggtctaaaactgcat-aaa 45048527  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    | |  |||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||    
T  45048528 cggctatttctctgcgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 45048594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 47827033 - 47827105
Alignment:
Q  186 aacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaa 258  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||| ||||| |||||||||||| |||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaa 47827105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 17088441 - 17088587
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg--taggtttaaaaccgcctaaa 129  Q
    |||||| ||||| |||| | | ||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||||  |||||          |||||    
T  17088441 ggttagcgtgtttaataaagtggattccttgtacccacatgttttattccttgtttatttcatggttgagcataggggggtaggt----------ctaaa 17088530  T
Q  130 actgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    |||||||||||||||||||||| || |||||||||||||||||| || |||| |||||    
T  17088531 actgtcatttctctgcgtttctaga-tttgaaaataggaggtagaactaaaactgcaa 17088587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 52269177 - 52269288
Alignment:
Q  170 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggatt 269  Q
    |||||||||||| ||||||||||||||||| |||| |||  |||||||||||| ||||||||||| |||  |||| ||||||   |||| ||||||||      
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  270 aaaagtgtaatt 281  Q
    ||||||||||||    
T  52269277 aaaagtgtaatt 52269288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 218
Target Start/End: Complemental strand, 9992399 - 9992223
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||| | |||| | |||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    |||      | | |||||||    
T  9992399 ggttagtgtgctgaataaagtagattctttgtacccacatgttttattctttgtttatttcatggttgagcatagg---tggt------cggactaaaac 9992309  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    |||||||||| || |||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || ||||||||||||||||    
T  9992308 tgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggaccattttgttc 9992223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 45048397 - 45048253
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag-gggtaggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | | |||||||||| ||| |||| ||||||||||||| ||||||| ||||||||||| ||||| ||          |||||||    
T  45048397 gttagtgtgttgaatacagtggattctttgtacccgcatgctttattcattgtttatttcatggttgagcatagagggtaagt----------ctaaaac 45048308  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||| |||||| ||||||||||||| ||||||||| |||||||||| |||| |||||    
T  45048307 tgttatttctatgcgtttctggag-ttgaaaatatgaggtaggactaaaactgcaa 45048253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 218
Target Start/End: Original strand, 9833477 - 9833630
Alignment:
Q  55 attctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg-ggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctgg 153  Q
    |||| |||| |||||||||||||||| ||||| |||||||||||||||||||| |||||          | |||||| ||| |||||| |||||||||||    
T  9833477 attccttgtacccacatgttttattccttgtttatttcatagttgagcataggtggtag----------gactaaaaatgttatttctgtgcgtttctgg 9833566  T
Q  154 agtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    || ||||||||||| |||||||| |||| ||||| ||| || ||| || | |||| |||||||||    
T  9833567 ag-ttgaaaatagggggtaggactaaaactgcaaaaaacataatattttagggacgattttgttc 9833630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 44802557 - 44802680
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    |||||| |||||||| |||| |||||||||||| ||||||||||||||| || |||| ||||| ||| |||||| || | |||| ||||||||| |||      
T  44802557 ctaaaattgtcatttttctgtgtttctggagtt-gaaaataggaggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgtttg 44802655  T
Q  225 aaaagggcaggaccagtttcgtgag 249  Q
    |||  |||| ||||| |||||||||    
T  44802656 aaagaggcatgaccactttcgtgag 44802680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 29021167 - 29021241
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  29021167 gttagtgtgctgaataaagtagattccttgtacccacatgttttattctttgtttatttcatggttgagcatagg 29021241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 37505312 - 37505238
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    |||||||||||| |||| | |||||| ||||| | |||||||||||||| ||||| ||||||| |||||||||||    
T  37505312 ggttagtgtgttgaataaagtagattttttgtactcacatgttttattctttgtttatttcatggttgagcatag 37505238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 47827039 - 47826969
Alignment:
Q  211 ttttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||| | || |||||||||| ||||| |||||||||||||||||| ||||||||  ||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaatt 47826969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 2733416 - 2733497
Alignment:
Q  200 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||| || ||| ||||| ||| ||||  |||||| |||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataatt 2733497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 218
Target Start/End: Original strand, 16298984 - 16299160
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||||||||| |||| | ||||||| |||| |||| ||||||||||| ||||| ||||||| |||||| |||||    |||| ||      ||||||     
T  16298984 ggttagtgtgttgaataaagtagattccttgtacccatatgttttattctttgtttatttcatggttgagtatagg---tggttgaa------ctaaaat 16299074  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    |||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  16299075 tgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 16299160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 39485275 - 39485163
Alignment:
Q  65 cccacatgttttattcattgttgatttcatagttgagcata-ggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaa 163  Q
    |||||||||||||||| ||||| ||||||| |||||||||| |||||||||          ||||||||||||| |||||| ||||||| || |||||||    
T  39485275 cccacatgttttattccttgtttatttcatggttgagcatatggggtaggt----------ctaaaactgtcatctctctgtgtttctgaag-ttgaaaa 39485187  T
Q  164 taggaggtaggacgaaaaatgcaa 187  Q
    |||||| |||||| |||| |||||    
T  39485186 taggagataggactaaaactgcaa 39485163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 30787074 - 30787149
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| ||||  ||||||||||||||| ||||| ||||||| ||||||||||||    
T  30787074 ggttagtgtgctgaataaagtagattccttgtatccacatgttttattctttgtttatttcatggttgagcatagg 30787149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 44582379 - 44582434
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||||||  ||||||||||||||| ||||| ||||||| ||||||||||||    
T  44582379 tagattctttgtagccacatgttttattctttgtttatttcatggttgagcatagg 44582434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 8229884 - 8229811
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||||| |||| | ||||||| |||| |||||||| ||||||  ||||| ||||||| ||||||||||    
T  8229884 ggttagtgtgttgaataaagtagattcattgtacccacatgctttatttcttgtttatttcatggttgagcata 8229811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 44954470 - 44954397
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| | ||||| ||||||||||    
T  44954470 ggttagtgtgctgaataaagtagattccttgtacccacatgttttattccttgtttacttcatggttgagcata 44954397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 8229800 - 8229732
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  8229800 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaa 8229732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 17641750 - 17641818
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 193  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  17641750 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaa 17641818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 443873 - 443928
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| |||||||| |||||||||||    
T  443873 tagattccttgtacccacatgatttattctttgtttatttcataattgagcatagg 443928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 16298906 - 16298851
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  16298906 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 16298851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 17641609 - 17641534
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| ||| |||||||||||| ||||| ||||||| ||||| ||||||    
T  17641609 ggttagtgtgctgaataaagtagattccttgtacccgcatgttttattccttgtttatttcatggttgaacatagg 17641534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 29439155 - 29439100
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| |||| ||| ||||||| ||||| ||||||| ||||||||||||    
T  29439155 tagattctttgtacccatatgatttattccttgtttatttcatggttgagcatagg 29439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 37421386 - 37421331
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  37421386 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 37421331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 37505390 - 37505445
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  37505390 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 37505445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 44582281 - 44582226
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  44582281 tagattccttgtacccacatgatttattccttgttcatttcatggttgagcatagg 44582226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 50305006 - 50304951
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||||| | |||||| ||||||| ||||| ||||||| ||||||||||||    
T  50305006 tagattctttgtactcacatgatttattccttgtttatttcatggttgagcatagg 50304951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 9992477 - 9992531
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    ||||||| |||| |||||||| ||||||| ||||| ||||||| |||||||||||    
T  9992477 tagattccttgtacccacatgatttattccttgtttatttcatggttgagcatag 9992531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 23526861 - 23526915
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatag 106  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||| ||||| |||||    
T  23526861 tagattccttgtacccacatgttttattccttgtttatttcatggttgaacatag 23526915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 39485377 - 39485466
Alignment:
Q  77 attcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaatag 166  Q
    |||| ||||| ||||||| |||||||||||||| ||||| || ||  || | ||||| |||||||||||||||||| ||| ||||||||||    
T  39485377 attctttgtttatttcatggttgagcatagggggtaggtctataaatgcttgaaactatcatttctctgcgtttcttgag-ttgaaaatag 39485466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 44954612 - 44954674
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  44954612 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 44954674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 8230027 - 8230064
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  8230027 ctaaaactgtcatttctgtgcgtttctggagttggaaa 8230064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 34555716 - 34555757
Alignment:
Q  66 ccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||    
T  34555716 ccacatgttttattctttgtttatttcatggttgagcatagg 34555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 34555766 - 34555803
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  34555766 ctaaaactgtcatttctgtgcgtttctggagttggaaa 34555803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 44291701 - 44291769
Alignment:
Q  129 aactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
    ||||| ||||||| || |||||||||||| ||||||||| |||||||| |||| ||||| ||| ||||||    
T  44291701 aactgccatttctatgtgtttctggagtt-gaaaatagggggtaggactaaaactgcaaaaaacatgata 44291769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 44954386 - 44954349
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaa 162  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  44954386 ctaaaactgtcatttctgtgcgtttctggagttggaaa 44954349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 29021252 - 29021311
Alignment:
Q  127 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 187  Q
    ||||||||||||| | ||||||||||||| ||||||||||| |||| ||| |||| |||||    
T  29021252 aaaactgtcatttatgtgcgtttctggag-ttgaaaatagggggtaagactaaaactgcaa 29021311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 168; Significance: 4e-90; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 10884 - 11163
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        ||||||| || | |||||||| ||||| ||||||||||||||||||||| |||||||||| || |||||    
T  10884 tctaagatatgtttcaaattagggtttttttggttagtatgctgaatagaatcgattccttgtgcccacatgttttattccttgttgattttatggttga 10983  T
Q  101 gcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 200  Q
    |||||||| ||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10984 gcataggg-taggtctaaaaccgcctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 11082  T
Q  201 tgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||    
T  11083 tgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaatt 11163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 267
Target Start/End: Complemental strand, 10864 - 10640
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||||| |||| | | ||||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||||      ||    || ||||||||    
T  10864 gttagtgtgttgaataaagtggattccttgtacccacatgctttattccttgtttatttcatggttgagcataggggg-----ta----cgtctaaaact 10774  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    ||||||||||||| ||| |||||  | ||||| |  |||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||||    
T  10773 gtcatttctctgcatttttggagaat-aaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggaccgttttgttctgttttaaaagggc 10675  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgagga 267  Q
    |||||||||||| ||||||| ||||| ||||||||    
T  10674 aggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 166; Significance: 7e-89; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 34 - 251
Target Start/End: Original strand, 16789 - 17006
Alignment:
Q  34 ttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactg 133  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  16789 ttagtgtgctgaatagaatagattccttgtgcccacatgttttattctttgttgatttcatggttgagcataggggtaggtctaaaatcgcctaaaactg 16888  T
Q  134 tcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggca 233  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||     
T  16889 taatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcg 16988  T
Q  234 ggaccagtttcgtgagta 251  Q
    ||| ||||||||||||||    
T  16989 ggatcagtttcgtgagta 17006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 218
Target Start/End: Complemental strand, 16740 - 16564
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||| |||||          ||||||    
T  16740 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattctttgtttatttcatggttgagcatagggggtaggt----------ctaaaa 16651  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    ||||||||||||||||||| |||||  | ||||| || |||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  16650 ctgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 161; Significance: 6e-86; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 33 - 281
Target Start/End: Original strand, 64597 - 64845
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  64597 gttagtgtgctgaatagaatagattccttgtgcccacatgttttattcctcgttgatttcatggttgagcatagaggtaggtctaaaaccgcctaaaact 64696  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggc 232  Q
    || |||| ||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  64697 gttatttttctccgtttctggagtttgaaaatagaagataggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggc 64796  T
Q  233 aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
     ||||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  64797 gggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaatt 64845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 64462 - 64307
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  64462 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 64364  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||| ||||| ||||||||||||||   |||| ||||||||  ||||||||||||    
T  64363 aaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaatt 64307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 205690 - 205877
Alignment:
Q  52 tagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttc 150  Q
    ||||||| ||||  ||||||||||||| | ||||| ||||||| |||||||||||||| |||||          ||||||||| |||||||||||||||     
T  205690 tagattcattgtaaccacatgttttatgccttgtttatttcatggttgagcatagggggtaggt----------ctaaaactgccatttctctgcgtttt 205779  T
Q  151 tggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagt 250  Q
    ||||| |||||||||||| ||||||| |||| ||||| ||| |||||| || | ||||  ||||||||  ||  |||  |||||||||| ||||||||||    
T  205780 tggag-ttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacggttttgttcgatttgaaagaggcaggaccattttcgtgagt 205877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 198
Target Start/End: Complemental strand, 205194 - 205038
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaact 132  Q
    ||||||||| | |||| | ||||||  |||| |||||||| ||||||| ||||| ||||||| |||||| |||||||||    ||     | ||||||||    
T  205194 gttagtgtgctaaataaagtagattacttgtacccacatgctttattctttgtttatttcatggttgagtataggggta----tag----gtctaaaact 205103  T
Q  133 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 198  Q
      |||||||||| |||||| ||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  205102 tccatttctctgtgtttctagagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgata 205038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 159; Significance: 1e-84; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 45 - 247
Target Start/End: Complemental strand, 4444 - 4242
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 144  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4444 aatagaatagattccttgtgcccacatgttttattccttgttgatttcatggttgagcataggggtaggtctaaaaccgcctaaaactgtcatttctctg 4345  T
Q  145 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttc 244  Q
    | ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  4344 catttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttc 4245  T
Q  245 gtg 247  Q
    |||    
T  4244 gtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 4508 - 4747
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| ||||| ||||||| | |||||||||||| |||||          ||||||    
T  4508 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttgtttatttcatggatgagcatagggggtaggt----------ctaaaa 4597  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    |||||||||||||| |||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||    
T  4598 ctgtcatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagg 4696  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||||||||||||||||||  ||||| ||||| ||  ||||||||||||    
T  4697 gcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaatt 4747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 42413 - 42174
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaac 131  Q
    |||||| ||| | |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||          |||||||    
T  42413 ggttagggtgctgaatagaatagattcattgtgcccacatgttttattccttgttgatttcatagttgagcataggggtaggt----------ctaaaac 42324  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||    
T  42323 tgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaatgg 42224  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| ||||||||||| ||||||||| |||||| | |||||||||||||    
T  42223 caggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaatt 42174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 266
Target Start/End: Original strand, 42460 - 42683
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| || || |||||||  ||||||||||||| |||||          ||||||    
T  42460 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttatttatttcatgattgagcatagggggtaggt----------ctaaaa 42549  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || |||||||||||||||| |||||||||||||| ||||||||| |||||||||||| |||||||    
T  42550 ctgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgaaacaaaaatgataactgaaggaccgttttgttctgttttaaaagg 42647  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgagg 266  Q
    |||| | ||||||| ||||||||||||| |||||||    
T  42648 gcagaatcagtttcctgagtagaccaaaacacgagg 42683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 5054 - 5331
Alignment:
Q  1 tctaagatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttga 100  Q
    |||||||||||||||||||||||        |||||||||| |  ||| ||||||||| |||||| |||||||||||||| | ||||||||||| |||||    
T  5054 tctaagatatgtttcaaattagggttttcttggttagtgtgctggatataatagattcattgtgcacacatgttttattcctggttgatttcatggttga 5153  T
Q  101 gcata-ggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 199  Q
    ||||| |||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  5154 gcatatggggtaagtctaaaaccgcctaaaactgtcatttttctgcgtttctggagtttgaaaataggagg----acgaaaaatgcaacaaaaatgataa 5249  T
Q  200 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    |||||  ||| |||| ||||||| ||||||| || |||||||||||||| ||| ||||| ||||||||  ||||||||||||    
T  5250 ttgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaatt 5331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 5036 - 4798
Alignment:
Q  33 gttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaac 131  Q
    ||||||||||| |||| | |||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||||          |||||||    
T  5036 gttagtgtgttgaataaagtagattctttgtacccacatgttttattccttgtttatttcatggttgagcatagggggtaggt----------ctaaaac 4947  T
Q  132 tgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaaggg 231  Q
    ||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  4946 tgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggg 4848  T
Q  232 caggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    || |||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  4847 catgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 4798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 1015 - 1281
Alignment:
Q  5 agatatgtttcaaattaggannnnnnnggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcat 104  Q
    |||||||||||||||||||        |||||||||| | | |||||||||||   |||||| ||||||||||||| |||||||| |||| |||||||||    
T  1015 agatatgtttcaaattagggtttttttggttagtgtgctgagtagaatagatttcatgtgcctacatgttttattccttgttgatatcatggttgagcat 1114  T
Q  105 aggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 204  Q
    |||||| |||          ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1115 aggggtgggt----------ctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaa 1204  T
Q  205 ggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||    
T  1205 ggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaatt 1281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 912 - 758
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 224  Q
    |||||||||| |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |    
T  912 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccgttttgttctgtttt 815  T
Q  225 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||| |||||||||| ||||| ||||| ||  ||||||||||||    
T  814 aaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaatt 758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 60 - 281
Target Start/End: Complemental strand, 10156 - 9937
Alignment:
Q  60 ttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttg 159  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||    
T  10156 ttgtgcccatatgttttattccgtgttgatttcatagttgagcataggggtatgtttaaaaccgcctaaaattgtcatttctct-cgtttcttgagtttg 10058  T
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    |||||||||||||||| | |||||| ||||||| |||||||||||||||||||||||||| |  |||||||||| || ||||||||||| ||| | |||     
T  10057 aaaataggaggtaggatg-aaaatgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaa 9959  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||  |||| |||||||    
T  9958 cacgaggaccaaaaatgtaatt 9937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 45 - 281
Target Start/End: Original strand, 10187 - 10412
Alignment:
Q  45 aatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaactgtcatttctct 143  Q
    |||||||||||||  ||||||||| || |||||||| ||||||||||||| |||||||||||||| ||||||||||||          ||||||||||||    
T  10187 aatagaatagatttcttgtgcccaaatattttattccttgttgatttcatggttgagcatagggggtaggtttaaaac----------tgtcatttctct 10276  T
Q  144 gcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagttt 243  Q
    |  ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |  ||||||||    
T  10277 gaatttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggaaacaccagttt 10374  T
Q  244 cgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||| ||||||||  ||||||||||||    
T  10375 cgtgagtagaccaaaacacgaggaccaaaagtgtaatt 10412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 281
Target Start/End: Original strand, 133974 - 134213
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagggg-taggtttaaaaccgcctaaaa 130  Q
    |||||||||||| |||| | | |||||||||| |||||||| ||||||| || || ||||||| |||||||||||||| |||||          ||||||    
T  133974 ggttagtgtgttgaataaagtggattctttgtacccacatgctttattccttatttatttcatggttgagcatagggggtaggt----------ctaaaa 134063  T
Q  131 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 230  Q
    ||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||| ||||||||||| | |||||||||||  |||||||    
T  134064 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatcgttttgttctgtattaaaagg 134162  T
Q  231 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||| ||| |||||||||||||| ||||| ||||||||  ||||||||||||    
T  134163 gcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 134213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 280
Target Start/End: Complemental strand, 19054 - 18841
Alignment:
Q  55 attctttgtgcccacatgttttattcattgttgatttcatagttgagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctgga 154  Q
    ||||||||| |||| ||||||||||| ||||| ||||||| ||||| ||||| |||| ||          |||||||||| |||||||||||||| ||||    
T  19054 attctttgtacccagatgttttattccttgtttatttcatggttgaacatagaggtaagt----------ctaaaactgttatttctctgcgtttttgga 18965  T
Q  155 gtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagac 254  Q
    |  | ||||| || ||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||| |||||||||||||||||| |    
T  18964 gaat-aaaatggg-ggtaggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggc 18867  T
Q  255 caaatcacgaggattaaaagtgtaat 280  Q
    |||| ||  ||||  |||||||||||    
T  18866 caaaacagaaggaccaaaagtgtaat 18841  T

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Target: scaffold0176; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 19069 - 19161
Alignment:
Q  189 aaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||  ||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatt 19161  T

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Target: scaffold1585 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 692 - 572
Alignment:
Q  161 aaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatc 260  Q
    |||| ||||||  |||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||| || || |||||||||||| ||||| |    
T  692 aaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaac 593  T
Q  261 acgaggattaaaagtgtaatt 281  Q
    |||||||| ||||||||||||    
T  592 acgaggatcaaaagtgtaatt 572  T

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Target: scaffold0113 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 28674 - 28783
Alignment:
Q  172 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 271  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||||||| |||||||||| |||||||||||| ||||| ||||| ||||| ||  ||    
T  28674 aggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaa 28773  T
Q  272 aagtgtaatt 281  Q
    ||||||||||    
T  28774 aagtgtaatt 28783  T

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Target: scaffold0057 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 61877 - 61998
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 259  Q
    ||||| || |||||||||||||||  ||||||||||||| ||||| ||  |||||||||| || |||||||| ||||||| ||||||||||||||||||     
T  61877 aaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaa 61976  T
Q  260 cacgaggattaaaagtgtaatt 281  Q
    ||||||||| ||||||||||||    
T  61977 cacgaggatcaaaagtgtaatt 61998  T

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Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 61102 - 61036
Alignment:
Q  212 tttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgta 278  Q
    |||||||| || ||||| ||||||| || |||||||||||| ||||| ||||||||| |||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgta 61036  T

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Target: scaffold1696 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 565 - 471
Alignment:
Q  170 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacga 264  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||  || ||||| |||||||||||| ||||| |||||    
T  565 gtaggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacga 471  T

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Target: scaffold0076 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 8451 - 8549
Alignment:
Q  183 tgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatt 281  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||||| |||||||||||||| ||||||||||| || || ||  ||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatt 8549  T

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Target: scaffold0168 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 7707 - 7784
Alignment:
Q  160 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggac 237  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| |||  |||||||||||| |||||||| |||||    
T  7707 aaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

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Target: scaffold0712 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 6636 - 6563
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||||| |||| | ||||||| |||| |||||||||||||||| ||||| |||| || ||||||||||    
T  6636 ggttagtgtgttgaataaagtagattccttgtacccacatgttttattctttgtttattttatggttgagcata 6563  T

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Target: scaffold0712; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 6777 - 6818
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 167  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  6777 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 6818  T

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Target: scaffold0712; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 6551 - 6460
Alignment:
Q  126 taaaactgtcatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    |||||||||||||||| |||||||||| || ||| ||||||| || |||||| |||| ||||| ||| || |||||| |||||| |||||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaag-ttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgttc 6460  T

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Target: scaffold0709 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 6654 - 6581
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcata 105  Q
    |||||||||||| |||| | ||||||| |||| |||||||||||||||| ||||| |||| || ||||||||||    
T  6654 ggttagtgtgttgaataaagtagattccttgtacccacatgttttattctttgtttattttatggttgagcata 6581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 6795 - 6836
Alignment:
Q  125 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 167  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  6795 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 6836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 6569 - 6478
Alignment:
Q  126 taaaactgtcatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 218  Q
    |||||||||||||||| |||||||||| || ||| ||||||| || |||||| |||| ||||| ||| || |||||| |||||| |||||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaag-ttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgttc 6478  T

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Target: scaffold0097 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 46569 - 46644
Alignment:
Q  32 ggttagtgtgttcaatagaatagattctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||||||||| | |||| | ||||||| |||| |||||||||||||||| ||||| |||||||  |||||||||||    
T  46569 ggttagtgtgctaaataaagtagattccttgtacccacatgttttattccttgtttatttcatgattgagcatagg 46644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 46488 - 46436
Alignment:
Q  55 attctttgtgcccacatgttttattcattgttgatttcatagttgagcatagg 107  Q
    |||| |||| |||||||| ||||||| ||||| ||||||| ||||||||||||    
T  46488 attccttgtacccacatgatttattccttgtttatttcatggttgagcatagg 46436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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