View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1290_low_7 (Length: 591)

Name: NF1290_low_7
Description: NF1290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1290_low_7
NF1290_low_7
[»] chr5 (58 HSPs)
chr5 (10-393)||(38943753-38944136)
chr5 (395-583)||(5818927-5819115)
chr5 (391-583)||(8647797-8647989)
chr5 (395-583)||(19359495-19359683)
chr5 (393-583)||(24331555-24331747)
chr5 (391-583)||(8461290-8461482)
chr5 (399-581)||(14215243-14215425)
chr5 (397-583)||(164191-164376)
chr5 (399-583)||(2864756-2864940)
chr5 (395-583)||(18182968-18183156)
chr5 (390-583)||(29454733-29454926)
chr5 (399-583)||(15371873-15372060)
chr5 (396-583)||(25000448-25000635)
chr5 (395-583)||(16018946-16019134)
chr5 (396-558)||(29455127-29455288)
chr5 (397-558)||(8647438-8647598)
chr5 (388-576)||(15709335-15709522)
chr5 (392-558)||(18183354-18183519)
chr5 (395-558)||(2865140-2865302)
chr5 (397-558)||(5819314-5819474)
chr5 (395-558)||(24362221-24362383)
chr5 (397-554)||(19359136-19359292)
chr5 (403-583)||(24361843-24362022)
chr5 (392-558)||(15372258-15372423)
chr5 (393-558)||(15708967-15709130)
chr5 (403-583)||(24325218-24325397)
chr5 (395-558)||(8460928-8461090)
chr5 (394-558)||(14215628-14215791)
chr5 (392-558)||(164576-164741)
chr5 (395-558)||(14463906-14464067)
chr5 (398-514)||(4222150-4222266)
chr5 (397-523)||(7349436-7349562)
chr5 (479-559)||(14462686-14462770)
chr5 (419-558)||(25000112-25000250)
chr5 (397-514)||(4219663-4219780)
chr5 (398-525)||(6018315-6018441)
chr5 (485-580)||(10721873-10721967)
chr5 (397-523)||(7348559-7348685)
chr5 (397-514)||(4623148-4623265)
chr5 (396-514)||(16018588-16018705)
chr5 (432-558)||(24331945-24332073)
chr5 (485-576)||(27307148-27307238)
chr5 (431-523)||(6019189-6019282)
chr5 (485-583)||(28494931-28495029)
chr5 (465-558)||(32305886-32305977)
chr5 (491-558)||(41834445-41834511)
chr5 (496-558)||(28495227-28495288)
chr5 (431-523)||(4624644-4624736)
chr5 (502-558)||(27307444-27307499)
chr5 (490-565)||(16752948-16753022)
chr5 (465-558)||(28290030-28290122)
chr5 (479-514)||(13814155-13814190)
chr5 (496-558)||(16752680-16752741)
chr5 (521-558)||(15029695-15029732)
chr5 (465-558)||(19291424-19291517)
chr5 (521-558)||(28289807-28289844)
chr5 (465-557)||(8419008-8419098)
chr5 (502-558)||(14340793-14340849)
[»] chr7 (42 HSPs)
chr7 (391-583)||(19590884-19591076)
chr7 (389-583)||(32004606-32004800)
chr7 (391-583)||(38859000-38859192)
chr7 (386-583)||(2658828-2659025)
chr7 (391-583)||(37787126-37787318)
chr7 (397-583)||(35288903-35289089)
chr7 (395-583)||(34533789-34533977)
chr7 (396-583)||(19830779-19830965)
chr7 (394-580)||(23952727-23952914)
chr7 (416-583)||(29099869-29100036)
chr7 (400-583)||(4641803-4641983)
chr7 (395-558)||(19830418-19830580)
chr7 (396-558)||(37786766-37786927)
chr7 (397-558)||(19590525-19590685)
chr7 (395-558)||(35289286-35289448)
chr7 (400-558)||(29100236-29100393)
chr7 (396-558)||(38858642-38858803)
chr7 (395-558)||(34534176-34534338)
chr7 (397-558)||(32004999-32005159)
chr7 (394-558)||(2659225-2659388)
chr7 (395-558)||(4478085-4478247)
chr7 (403-558)||(23953114-23953268)
chr7 (400-558)||(4641443-4641600)
chr7 (393-513)||(38160947-38161067)
chr7 (398-523)||(28584341-28584466)
chr7 (395-523)||(28583437-28583565)
chr7 (496-583)||(4477800-4477887)
chr7 (465-558)||(9181600-9181692)
chr7 (485-558)||(35578986-35579058)
chr7 (485-557)||(9393823-9393894)
chr7 (391-558)||(34595158-34595324)
chr7 (392-558)||(7732483-7732648)
chr7 (502-558)||(32427406-32427461)
chr7 (491-558)||(27245297-27245364)
chr7 (387-558)||(48247977-48248148)
chr7 (516-558)||(26026437-26026478)
chr7 (465-558)||(25637584-25637676)
chr7 (521-558)||(26048071-26048108)
chr7 (521-558)||(28687885-28687922)
chr7 (485-558)||(35579272-35579344)
chr7 (490-558)||(24929689-24929757)
chr7 (490-558)||(33880971-33881038)
[»] chr4 (69 HSPs)
chr4 (386-583)||(22434168-22434365)
chr4 (397-583)||(45082783-45082969)
chr4 (397-583)||(46193405-46193591)
chr4 (395-583)||(15523233-15523421)
chr4 (394-583)||(20470870-20471059)
chr4 (397-583)||(25447247-25447433)
chr4 (394-583)||(23494802-23494991)
chr4 (391-583)||(4219918-4220110)
chr4 (395-583)||(51021155-51021342)
chr4 (397-583)||(12234688-12234874)
chr4 (400-578)||(48526545-48526723)
chr4 (395-583)||(54995067-54995255)
chr4 (396-583)||(11153145-11153332)
chr4 (399-583)||(2118295-2118480)
chr4 (383-583)||(25938030-25938230)
chr4 (400-583)||(18751602-18751785)
chr4 (432-583)||(12503471-12503622)
chr4 (396-558)||(15523619-15523780)
chr4 (395-558)||(25447621-25447783)
chr4 (391-558)||(25937664-25937830)
chr4 (399-558)||(33109686-33109844)
chr4 (399-558)||(38962204-38962362)
chr4 (392-558)||(11153532-11153697)
chr4 (394-557)||(12234326-12234488)
chr4 (399-558)||(46193790-46193948)
chr4 (393-558)||(22434563-22434725)
chr4 (395-523)||(33109883-33110011)
chr4 (399-558)||(23494445-23494603)
chr4 (399-557)||(4219559-4219716)
chr4 (392-558)||(51020792-51020957)
chr4 (396-558)||(48526195-48526355)
chr4 (396-558)||(22170322-22170482)
chr4 (394-511)||(18763951-18764068)
chr4 (393-514)||(20958288-20958408)
chr4 (394-558)||(45082429-45082590)
chr4 (395-511)||(48713777-48713893)
chr4 (395-558)||(54995453-54995614)
chr4 (400-558)||(2118681-2118837)
chr4 (397-514)||(35363028-35363146)
chr4 (416-514)||(43243708-43243806)
chr4 (400-523)||(16690939-16691062)
chr4 (396-525)||(10258304-10258433)
chr4 (397-523)||(16691491-16691616)
chr4 (395-511)||(48293592-48293708)
chr4 (416-523)||(43281210-43281316)
chr4 (397-523)||(48294961-48295088)
chr4 (465-558)||(12503821-12503913)
chr4 (398-514)||(44892576-44892692)
chr4 (395-503)||(48708293-48708401)
chr4 (455-523)||(43242328-43242396)
chr4 (485-558)||(17504061-17504133)
chr4 (432-509)||(20957224-20957301)
chr4 (396-467)||(16318251-16318322)
chr4 (398-523)||(44890518-44890643)
chr4 (496-558)||(17504345-17504407)
chr4 (496-558)||(35193406-35193467)
chr4 (461-514)||(44220805-44220858)
chr4 (397-505)||(55189528-55189636)
chr4 (485-567)||(40160468-40160549)
chr4 (539-577)||(10795692-10795730)
chr4 (516-558)||(12593143-12593184)
chr4 (496-558)||(14439926-14439988)
chr4 (465-558)||(18965208-18965300)
chr4 (516-558)||(46736774-46736815)
chr4 (466-558)||(229545-229636)
chr4 (521-558)||(26974407-26974444)
chr4 (465-558)||(34789450-34789542)
chr4 (521-558)||(45838933-45838970)
chr4 (526-558)||(46737041-46737073)
[»] chr6 (44 HSPs)
chr6 (393-583)||(22219712-22219902)
chr6 (388-583)||(11445346-11445541)
chr6 (394-583)||(12935154-12935343)
chr6 (396-583)||(31470314-31470501)
chr6 (396-583)||(20741460-20741650)
chr6 (395-583)||(23075487-23075675)
chr6 (400-558)||(10899942-10900100)
chr6 (400-583)||(18504922-18505105)
chr6 (394-583)||(2319669-2319857)
chr6 (397-583)||(18257496-18257682)
chr6 (396-560)||(11276589-11276753)
chr6 (395-558)||(20741098-20741260)
chr6 (398-577)||(15827639-15827819)
chr6 (395-558)||(18257135-18257297)
chr6 (392-558)||(10900315-10900480)
chr6 (397-583)||(4811616-4811801)
chr6 (388-558)||(11444978-11445147)
chr6 (397-558)||(11276967-11277127)
chr6 (393-558)||(28472633-28472796)
chr6 (393-558)||(29859822-29859985)
chr6 (396-558)||(15828026-15828187)
chr6 (393-558)||(31470701-31470865)
chr6 (395-558)||(12935542-12935704)
chr6 (398-557)||(18505305-18505463)
chr6 (397-558)||(1149816-1149977)
chr6 (400-558)||(2322604-2322760)
chr6 (395-485)||(1149463-1149553)
chr6 (396-494)||(23073998-23074096)
chr6 (397-558)||(4811372-4811532)
chr6 (399-510)||(29035069-29035180)
chr6 (399-523)||(29033436-29033560)
chr6 (400-523)||(3835145-3835268)
chr6 (392-514)||(18296140-18296262)
chr6 (490-560)||(35163570-35163639)
chr6 (527-583)||(1149558-1149614)
chr6 (510-576)||(32836114-32836179)
chr6 (490-558)||(31573817-31573885)
chr6 (396-558)||(5114467-5114628)
chr6 (465-558)||(25472398-25472491)
chr6 (521-558)||(28636582-28636619)
chr6 (465-558)||(29891466-29891558)
chr6 (521-558)||(31073528-31073565)
chr6 (490-557)||(25468943-25469010)
chr6 (539-583)||(28472997-28473041)
[»] chr2 (56 HSPs)
chr2 (393-583)||(43058692-43058881)
chr2 (396-583)||(18450829-18451016)
chr2 (392-583)||(7446705-7446896)
chr2 (395-583)||(22374684-22374872)
chr2 (399-583)||(40815347-40815531)
chr2 (396-583)||(28616973-28617160)
chr2 (398-583)||(239711-239896)
chr2 (395-583)||(11090879-11091067)
chr2 (400-581)||(40027501-40027682)
chr2 (390-558)||(26538463-26538631)
chr2 (395-583)||(1978468-1978656)
chr2 (392-583)||(14432500-14432691)
chr2 (392-583)||(3025822-3026011)
chr2 (400-576)||(8425358-8425533)
chr2 (395-558)||(11090519-11090681)
chr2 (392-558)||(18451216-18451381)
chr2 (394-558)||(239350-239512)
chr2 (395-558)||(22374318-22374480)
chr2 (392-558)||(40815730-40815895)
chr2 (391-558)||(40027134-40027300)
chr2 (397-558)||(43058333-43058493)
chr2 (395-558)||(1978106-1978268)
chr2 (396-554)||(7446341-7446497)
chr2 (396-558)||(26538096-26538257)
chr2 (391-523)||(28616607-28616739)
chr2 (395-515)||(28847122-28847242)
chr2 (400-558)||(8425745-8425902)
chr2 (396-523)||(20444748-20444875)
chr2 (400-558)||(14432145-14432302)
chr2 (394-558)||(3025463-3025625)
chr2 (392-512)||(20440461-20440581)
chr2 (398-512)||(35781093-35781207)
chr2 (397-523)||(35779708-35779834)
chr2 (399-523)||(8972239-8972363)
chr2 (399-510)||(15551501-15551612)
chr2 (399-514)||(15552482-15552596)
chr2 (434-558)||(28143416-28143538)
chr2 (496-556)||(31797166-31797225)
chr2 (465-558)||(44219712-44219804)
chr2 (465-558)||(14942230-14942324)
chr2 (433-558)||(62993-63117)
chr2 (392-558)||(20128123-20128288)
chr2 (496-558)||(33920710-33920772)
chr2 (496-558)||(5560936-5560998)
chr2 (496-558)||(13399520-13399582)
chr2 (516-558)||(15550793-15550834)
chr2 (491-557)||(43160397-43160463)
chr2 (521-558)||(4356142-4356179)
chr2 (521-558)||(4809002-4809039)
chr2 (465-558)||(6949519-6949612)
chr2 (465-558)||(11539705-11539798)
chr2 (521-558)||(11540024-11540061)
chr2 (465-558)||(16175735-16175828)
chr2 (521-558)||(42192628-42192665)
chr2 (391-558)||(43216095-43216261)
chr2 (491-558)||(43160103-43160170)
[»] chr8 (34 HSPs)
chr8 (396-583)||(13224998-13225185)
chr8 (388-583)||(19176281-19176476)
chr8 (400-583)||(9928912-9929095)
chr8 (396-583)||(11656816-11657003)
chr8 (397-583)||(41681493-41681679)
chr8 (400-583)||(12572210-12572393)
chr8 (396-583)||(44831246-44831433)
chr8 (393-583)||(33742918-33743107)
chr8 (398-583)||(31133579-31133764)
chr8 (399-583)||(33328499-33328683)
chr8 (392-556)||(34540934-34541098)
chr8 (395-557)||(41681132-41681292)
chr8 (395-552)||(4629795-4629952)
chr8 (393-558)||(19176675-19176839)
chr8 (396-558)||(9930042-9930203)
chr8 (393-558)||(12571859-12572024)
chr8 (391-558)||(11656449-11656616)
chr8 (395-558)||(31133218-31133380)
chr8 (400-558)||(33328161-33328318)
chr8 (394-558)||(44831630-44831793)
chr8 (401-558)||(13224645-13224800)
chr8 (391-558)||(9178021-9178186)
chr8 (489-583)||(9177724-9177818)
chr8 (395-505)||(11336959-11337069)
chr8 (444-558)||(33743304-33743417)
chr8 (390-523)||(10918119-10918252)
chr8 (400-558)||(4630177-4630328)
chr8 (396-509)||(8073985-8074097)
chr8 (476-523)||(43958264-43958311)
chr8 (386-558)||(35427198-35427369)
chr8 (502-558)||(18805267-18805322)
chr8 (465-557)||(18049658-18049750)
chr8 (496-558)||(28254812-28254874)
chr8 (465-558)||(28254493-28254586)
[»] chr3 (88 HSPs)
chr3 (392-583)||(37727289-37727480)
chr3 (396-576)||(39555577-39555757)
chr3 (396-583)||(31778652-31778839)
chr3 (391-583)||(43973799-43973991)
chr3 (393-583)||(29801775-29801965)
chr3 (394-583)||(5137340-5137529)
chr3 (395-583)||(4275723-4275911)
chr3 (394-583)||(17464488-17464677)
chr3 (391-583)||(22424808-22425000)
chr3 (396-583)||(20840920-20841107)
chr3 (396-583)||(27393660-27393847)
chr3 (397-583)||(25853234-25853420)
chr3 (396-567)||(30098138-30098309)
chr3 (400-583)||(32534962-32535145)
chr3 (392-583)||(23644823-23645015)
chr3 (395-575)||(26837358-26837538)
chr3 (400-583)||(26274570-26274753)
chr3 (418-583)||(24300577-24300742)
chr3 (425-581)||(41047060-41047215)
chr3 (397-558)||(39555962-39556122)
chr3 (395-558)||(31779037-31779199)
chr3 (394-558)||(20840557-20840720)
chr3 (399-558)||(25853612-25853770)
chr3 (396-558)||(37726928-37727089)
chr3 (395-558)||(5136978-5137140)
chr3 (394-553)||(48452986-48453144)
chr3 (392-558)||(24300941-24301106)
chr3 (400-558)||(41046703-41046860)
chr3 (392-558)||(32535344-32535513)
chr3 (396-558)||(23644461-23644622)
chr3 (396-558)||(27393962-27394123)
chr3 (392-558)||(30104477-30104641)
chr3 (397-558)||(43973441-43973601)
chr3 (392-558)||(26837741-26837905)
chr3 (401-547)||(22425209-22425354)
chr3 (397-514)||(29801356-29801473)
chr3 (397-523)||(23228427-23228552)
chr3 (398-511)||(51473429-51473542)
chr3 (396-558)||(17464876-17465038)
chr3 (400-523)||(25612396-25612519)
chr3 (431-558)||(26274952-26275077)
chr3 (392-523)||(51474753-51474884)
chr3 (397-523)||(50116828-50116954)
chr3 (398-514)||(32697128-32697244)
chr3 (415-511)||(18010176-18010272)
chr3 (399-523)||(25420560-25420684)
chr3 (395-514)||(37220555-37220674)
chr3 (395-508)||(45965936-45966049)
chr3 (502-558)||(55192222-55192277)
chr3 (491-577)||(8873784-8873869)
chr3 (485-558)||(27200078-27200150)
chr3 (395-472)||(37222041-37222118)
chr3 (485-573)||(2323466-2323553)
chr3 (490-558)||(37075781-37075848)
chr3 (502-576)||(50900637-50900710)
chr3 (433-558)||(55389641-55389765)
chr3 (485-583)||(37076034-37076133)
chr3 (461-511)||(23227320-23227370)
chr3 (465-558)||(50662798-50662890)
chr3 (386-494)||(25419133-25419242)
chr3 (521-558)||(32730775-32730812)
chr3 (485-558)||(36701482-36701554)
chr3 (465-558)||(51828343-51828436)
chr3 (490-558)||(8874072-8874138)
chr3 (490-558)||(40275187-40275255)
chr3 (502-558)||(49407900-49407955)
chr3 (395-558)||(49720369-49720531)
chr3 (396-558)||(51827956-51828117)
chr3 (491-558)||(43222775-43222842)
chr3 (491-558)||(47431790-47431857)
chr3 (496-558)||(14654577-14654639)
chr3 (400-558)||(22370599-22370757)
chr3 (496-558)||(37847206-37847267)
chr3 (496-558)||(40839038-40839100)
chr3 (496-558)||(43222488-43222550)
chr3 (465-558)||(44676858-44676950)
chr3 (496-558)||(50900914-50900975)
chr3 (516-558)||(52236935-52236976)
chr3 (433-558)||(52237203-52237327)
chr3 (513-558)||(36701224-36701268)
chr3 (521-558)||(40838775-40838812)
chr3 (465-558)||(46013808-46013901)
chr3 (521-558)||(52375450-52375487)
chr3 (521-558)||(52375717-52375754)
chr3 (455-511)||(32695761-32695817)
chr3 (490-558)||(34105034-34105102)
chr3 (491-558)||(49408169-49408233)
chr3 (502-558)||(55389983-55390039)
[»] chr1 (55 HSPs)
chr1 (393-583)||(21856038-21856228)
chr1 (396-583)||(39154379-39154566)
chr1 (395-583)||(15173453-15173640)
chr1 (395-583)||(50970276-50970464)
chr1 (390-584)||(15646185-15646379)
chr1 (399-583)||(17433574-17433758)
chr1 (392-583)||(29869978-29870169)
chr1 (405-583)||(33143925-33144103)
chr1 (398-583)||(5539817-5540002)
chr1 (398-583)||(8678542-8678727)
chr1 (396-583)||(18984478-18984665)
chr1 (398-583)||(4636330-4636515)
chr1 (397-558)||(29307326-29307487)
chr1 (398-581)||(5962579-5962762)
chr1 (391-567)||(26859053-26859229)
chr1 (387-558)||(9019347-9019518)
chr1 (395-558)||(18984117-18984279)
chr1 (397-583)||(17112282-17112467)
chr1 (396-558)||(50970663-50970824)
chr1 (397-558)||(29306953-29307113)
chr1 (399-558)||(33144304-33144462)
chr1 (396-558)||(5540203-5540364)
chr1 (396-558)||(15646580-15646741)
chr1 (397-558)||(8678927-8679086)
chr1 (396-558)||(29869619-29869780)
chr1 (395-558)||(26859445-26859606)
chr1 (400-558)||(15173099-15173256)
chr1 (388-547)||(9018964-9019122)
chr1 (400-558)||(5962963-5963120)
chr1 (397-558)||(21856428-21856588)
chr1 (397-558)||(17433216-17433376)
chr1 (399-558)||(39154021-39154179)
chr1 (396-523)||(52268289-52268416)
chr1 (388-483)||(2733416-2733511)
chr1 (387-497)||(47827033-47827141)
chr1 (399-513)||(52269177-52269291)
chr1 (392-558)||(44802557-44802722)
chr1 (461-558)||(4636037-4636132)
chr1 (399-472)||(47826966-47827039)
chr1 (496-558)||(17088526-17088587)
chr1 (485-547)||(45048533-45048594)
chr1 (490-558)||(17088243-17088310)
chr1 (496-558)||(45048253-45048314)
chr1 (465-558)||(9833538-9833630)
chr1 (465-558)||(9992223-9992315)
chr1 (490-558)||(8229732-8229800)
chr1 (490-558)||(17641750-17641818)
chr1 (496-558)||(39485163-39485224)
chr1 (496-558)||(44954612-44954674)
chr1 (521-558)||(8230027-8230064)
chr1 (465-558)||(16299068-16299160)
chr1 (521-558)||(34555766-34555803)
chr1 (485-554)||(44291701-44291769)
chr1 (521-558)||(44954349-44954386)
chr1 (496-556)||(29021252-29021311)
[»] scaffold0951 (2 HSPs)
scaffold0951 (394-581)||(2028-2215)
scaffold0951 (395-558)||(1665-1827)
[»] scaffold0417 (2 HSPs)
scaffold0417 (397-576)||(10989-11168)
scaffold0417 (416-558)||(10640-10781)
[»] scaffold1223 (2 HSPs)
scaffold1223 (397-558)||(1125-1286)
scaffold1223 (399-558)||(755-912)
[»] scaffold0157 (2 HSPs)
scaffold0157 (432-583)||(16855-17006)
scaffold0157 (465-558)||(16564-16656)
[»] scaffold0007 (4 HSPs)
scaffold0007 (400-583)||(64664-64847)
scaffold0007 (396-558)||(64301-64462)
scaffold0007 (399-558)||(205754-205911)
scaffold0007 (485-558)||(205038-205110)
[»] scaffold0273 (2 HSPs)
scaffold0273 (436-583)||(4242-4389)
scaffold0273 (395-558)||(4592-4754)
[»] scaffold0027 (2 HSPs)
scaffold0027 (400-558)||(42172-42330)
scaffold0027 (393-558)||(42544-42707)
[»] scaffold0295 (2 HSPs)
scaffold0295 (394-558)||(4790-4953)
scaffold0295 (399-577)||(5160-5334)
[»] scaffold0432 (2 HSPs)
scaffold0432 (400-583)||(9935-10116)
scaffold0432 (400-557)||(10259-10414)
[»] scaffold0019 (1 HSPs)
scaffold0019 (393-558)||(134058-134222)
[»] scaffold0176 (2 HSPs)
scaffold0176 (396-558)||(18834-18994)
scaffold0176 (391-494)||(19069-19172)
[»] scaffold1585 (1 HSPs)
scaffold1585 (398-522)||(568-692)
[»] scaffold0113 (1 HSPs)
scaffold0113 (396-511)||(28674-28789)
[»] scaffold0057 (2 HSPs)
scaffold0057 (400-523)||(61877-62000)
scaffold0057 (395-471)||(61026-61102)
[»] scaffold0076 (1 HSPs)
scaffold0076 (400-500)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (419-513)||(471-565)
[»] scaffold0168 (1 HSPs)
scaffold0168 (446-523)||(7707-7784)
[»] scaffold0712 (2 HSPs)
scaffold0712 (516-558)||(6777-6818)
scaffold0712 (465-557)||(6460-6551)
[»] scaffold0709 (2 HSPs)
scaffold0709 (516-558)||(6795-6836)
scaffold0709 (465-557)||(6478-6569)


Alignment Details
Target: chr5 (Bit Score: 352; Significance: 0; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 10 - 393
Target Start/End: Complemental strand, 38944136 - 38943753
Alignment:
Q  10 ccacagaccaagtttaaccaaatcaatgctaatgtggacgctaagcaattaaaaacttaaatacacgactagacgccatgtgtgaagaagggaatttgga 109  Q
    |||||||| |||||||||| |||||||| | |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38944136 ccacagactaagtttaaccgaatcaatgttgatgtagacgctaagcaattaaaaacttaagtacacgactagacgccatgtgtgaagaagggaatttgga 38944037  T
Q  110 tgagacagaaaattttggaacatagatagaatacgtgggcgtggccacacaagggcctcatttaatttttaaaaagttttgagagagaagaaccacatgt 209  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38944036 tgagacggaaaattttggaacatagatagaatacgtgggcgtggccacacaagggcctcatttaatttttaaaaagttttgagagagaagaaccacatgt 38943937  T
Q  210 taataaattttcaaatgtcgaaatttacatatatgtttaatgtctagggggtcattgatgttactgctataagggtgcaatgcttctattgaagttgcca 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38943936 taataaattttcaaatgtcgaaatttacatatatgtttaatgtctagggggtcattgatgttactgctataagggtgcaatgcttctattgaagttgcca 38943837  T
Q  310 cctgatagttatttttcatgcgtaatgtagttgtgtggcagcaactatttggtggaggaatcattgaaggaaaaccattaaatt 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38943836 cctgatagttatttttcatgcgtaatgtagttgtgtggcagcaactatttggtggaggaatcattgaaggaaaacccttaaatt 38943753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 395 - 583
Target Start/End: Original strand, 5818927 - 5819115
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 5819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 391 - 583
Target Start/End: Complemental strand, 8647989 - 8647797
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||||||||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  8647989 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcat 8647890  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8647889 ttttgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 8647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 395 - 583
Target Start/End: Complemental strand, 19359683 - 19359495
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacccctatgct 19359495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 393 - 583
Target Start/End: Original strand, 24331555 - 24331747
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatca--t 490  Q
    |||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||   |    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatt 24331654  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24331655 ttttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 24331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 391 - 583
Target Start/End: Complemental strand, 8461482 - 8461290
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||| ||||||||||||||||||  |||||||| ||||| ||||||||||||||| |||||| |||||| |||||||||||| |||||||||||||||||    
T  8461482 atttaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcat 8461383  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  8461382 ttttgctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 8461290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 399 - 581
Target Start/End: Original strand, 14215243 - 14215425
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| |||||  ||||||||||||||||  | |||||||| |||||||||||| ||||||||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 581  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 14215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 397 - 583
Target Start/End: Original strand, 164191 - 164376
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||  ||||||||||||||||||||||||||||| |||| ||||||| |||| ||||||||||||||| ||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gt 164289  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacccctatgct 164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 399 - 583
Target Start/End: Original strand, 2864756 - 2864940
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||| ||| ||||| |||||||||||| || || |||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacccctatgct 2864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 395 - 583
Target Start/End: Original strand, 18182968 - 18183156
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||||||||  || ||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacccctatgct 18183156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 390 - 583
Target Start/End: Original strand, 29454733 - 29454926
Alignment:
Q  390 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatca 489  Q
    ||||| |||||||||| |||||||  || | ||| ||||| |||||||||||| ||||| |||||||||| |||||||||||| ||||||| ||||||||    
T  29454733 aatttaaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatca 29454832  T
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  29454833 tttttgctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctacccatatgct 29454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 399 - 583
Target Start/End: Original strand, 15371873 - 15372060
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    ||||||||||||||| ||||||||  |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt----ttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||| ||||    ||||||||||||| ||||||| |||||||    
T  15371972 catttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagttttaattaggcggttttagacctacctctatgct 15372060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 25000635 - 25000448
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  || || || ||||| |||||||||||| ||||| ||  |||||| ||||||||||||||||| |||||||||||||||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 25000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 395 - 583
Target Start/End: Complemental strand, 16019134 - 16018946
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||||||||  ||||| || |||||  ||||||||||| ||||||||| |||||| || |||| |||||||| |||||||||||||||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 16018946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 29455288 - 29455127
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    |||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  29455188 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 29455127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 397 - 558
Target Start/End: Original strand, 8647438 - 8647598
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 8647598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 388 - 576
Target Start/End: Complemental strand, 15709522 - 15709335
Alignment:
Q  388 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattat 487  Q
    |||||||| |||||||||||||||||  || | ||| ||||| ||||||| |||||| ||| |||||||| | |||||||||||| ||||||| | ||||    
T  15709522 taaatttttggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgccctttaa-aacagaacaaaacggtcctttagttat 15709424  T
Q  488 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctaccc 576  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  15709423 catttctgttgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctaccc 15709335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 18183519 - 18183354
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  18183519 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 18183420  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||||| |||  ||| |  ||||| |||||||||||||| ||||||||||    
T  18183419 tttgttgcatttttcgtcctacc-cctcattttattctccaaaaacgcagagaaataacagttttag 18183354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 2865302 - 2865140
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||| |||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 2865140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 5819474 - 5819314
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||| |||||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttag 5819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 24362383 - 24362221
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||  ||||| ||||||||||||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  24362283 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 24362221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 397 - 554
Target Start/End: Original strand, 19359136 - 19359292
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  ||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 554  Q
    |||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtt 19359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 403 - 583
Target Start/End: Original strand, 24361843 - 24362022
Alignment:
Q  403 attacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatt 502  Q
    |||||||||||  ||| | || ||||| |||| |||||||||| || ||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  503 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  24361943 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 24362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 15372423 - 15372258
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||| ||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  15372423 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatt 15372324  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||| || |||| ||| ||||| |   |||| |||||||||||||||||||||||||    
T  15372323 tttgttgcattttttgttctacatcccatttt-attttccaaaaacgcagagaaatgacagttttag 15372258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 393 - 558
Target Start/End: Original strand, 15708967 - 15709130
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||||||||||  |||| ||| ||||| |||||||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||    
T  15708967 tttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcattt 15709066  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  15709067 ttgttgcatatttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 15709130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 403 - 583
Target Start/End: Original strand, 24325218 - 24325397
Alignment:
Q  403 attacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatt 502  Q
    |||||||||||  ||| | || ||||| |||| |||||||||| || ||||||| || ||||||||||||||||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  503 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  24325318 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttagccggttttagacctacccctatgct 24325397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 8460928 - 8461090
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    ||||||||||| |||||||  || ||||  ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| |||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccatttt-attctccaaaaatgcagagaaatgacagttttag 8461090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 394 - 558
Target Start/End: Complemental strand, 14215791 - 14215628
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||| ||||  |||||||| ||||  ||||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 14215692  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  14215691 tgttgcatttttcgtcttaacccccatttt-attctccaaaaacgtagagaaatgacagttttag 14215628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 164741 - 164576
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||| | |||| |||||| || ||||| | |||||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||||    
T  164741 ttttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatt 164642  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||| |||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  164641 tttgttgcattttttgtcctaccccccatttt-attctccaaaaatgtagagaaatgacagttttag 164576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 14464067 - 14463906
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||  |  || ||||||| || ||||||||| | |||||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
     ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  14463967 attgcatttttcgtcctacc-ccaatttt-attctccaaaaacgcagagaaatgacagttttag 14463906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 514
Target Start/End: Complemental strand, 4222266 - 4222150
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||||||||  |||||||| ||||| || ||||||||| ||||| |||||||||| ||||||||||||| ||| |||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  498 gcatttttcgtcctacc 514  Q
    |||||||||||||||||    
T  4222166 gcatttttcgtcctacc 4222150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 7349562 - 7349436
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| |||||||||||||||||| ||||||||| |||||| |||| |||||||   ||||||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  497 tgcatttttcgtcctacctcctatttt 523  Q
    |||| ||||| ||||||| || |||||    
T  7349462 tgcacttttcatcctaccccccatttt 7349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 479 - 559
Target Start/End: Original strand, 14462686 - 14462770
Alignment:
Q  479 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactc----cagaaacgcagagaaatgacagttttagg 559  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||| ||||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttagg 14462770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 558
Target Start/End: Original strand, 25000112 - 25000250
Alignment:
Q  419 tcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcct 518  Q
    ||||| ||||| |||||||||||  ||||| |||||| ||| ||||||| |||||||||||| ||||||||||||| |||||||||| |||||||| ||     
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  519 attttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |  ||||| ||||| |||||||||||||||||||    
T  25000212 atttt-attctccaaaaacgtagagaaatgacagttttag 25000250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 514
Target Start/End: Original strand, 4219663 - 4219780
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    ||||||||||||||||| ||||||||| ||||| ||| | || ||| ||||| |||| ||||| ||||||||||| | |||||| | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  497 tgcatttttcgtcctacc 514  Q
    ||||||||||||||||||    
T  4219763 tgcatttttcgtcctacc 4219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 525
Target Start/End: Original strand, 6018315 - 6018441
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||| ||||  | |||||| |||| ||||||||||||||||||| || ||||||| |||||||||||||  | ||||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  498 gcatttttcgtcctacctcctattttca 525  Q
    ||| |||| ||||||||  |||||||||    
T  6018414 gcagttttagtcctaccctctattttca 6018441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 485 - 580
Target Start/End: Original strand, 10721873 - 10721967
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctat 580  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctacccctat 10721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||| ||||  ||||| || ||| |||||||||||||| ||||| |||||||||| ||||||||||||   ||||||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  497 tgcatttttcgtcctacctcctatttt 523  Q
    |||| ||||||||||||| || |||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 514
Target Start/End: Original strand, 4623148 - 4623265
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  || ||||| ||||   ||||||||||| ||||||||||  |||| ||||||||||||| |||||||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  497 tgcatttttcgtcctacc 514  Q
     ||||||| |||||||||    
T  4623248 ggcattttccgtcctacc 4623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 396 - 514
Target Start/End: Original strand, 16018588 - 16018705
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  || ||||| ||||| ||| |||||||| || || |||||||||| || ||||||||| |||||||||||||| ||||||     
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  496 ttgcatttttcgtcctacc 514  Q
    ||||||||| |||||||||    
T  16018687 ttgcattttccgtcctacc 16018705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 432 - 558
Target Start/End: Complemental strand, 24332073 - 24331945
Alignment:
Q  432 tactcacgaaactggtcctgccctttt-acaacagaacaaaatggtccttcaattatcat-ttttgttgca-tttttcgtcctacctcctattttcaaac 528  Q
    |||||||||||||| ||||||| |||| | |||||||||||| |||||| |||||||||| |||||||||| |||||||||||||| || ||| | |  |    
T  24332073 tactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgttgcattttttcgtcctaccccccattct-attc 24331975  T
Q  529 tccagaaacgcagagaaatgacagttttag 558  Q
    |||| |||||||||||||||||||||||||    
T  24331974 tccaaaaacgcagagaaatgacagttttag 24331945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 576
Target Start/End: Original strand, 27307148 - 27307238
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctaccc 576  Q
    |||||| ||| ||||| |||| ||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  27307148 tatcatgttttttgcagttttagtcttacctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctaccc 27307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 431 - 523
Target Start/End: Complemental strand, 6019282 - 6019189
Alignment:
Q  431 ctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcat-ttttcgtcctacctcctatttt 523  Q
    ||||||||||||||| || ||| |||||| ||||||||||||  ||| || |||||||||||||||||||| |||||||||||||||| |||||    
T  6019282 ctactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcattttttcgtcctacctcccatttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 583
Target Start/End: Original strand, 28494931 - 28495029
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacc-cctatgct 583  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| |||||||||||||||||| ||||| |||||||  |||||| ||||||| ||||||||    
T  28494931 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaagtgacaattttaggtagttttagacctaccacctatgct 28495029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 32305886 - 32305977
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||| | || |||||| ||| ||||| |||| |||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  32305886 gaacaaaatcgtccctaaactatcatgttt-ttgcagttttagtcctacctcttattttcaa-ctccagaaacacagagaaatgacagttttag 32305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 491 - 558
Target Start/End: Complemental strand, 41834511 - 41834445
Alignment:
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||| |||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  41834511 tttttttgcagttttagtcctacctcctattttcaa-ctcttgaaacgcagagaaatgacagttttag 41834445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 28495288 - 28495227
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaa-ctccagaaccgcagagaaatgatagttttag 28495227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 431 - 523
Target Start/End: Complemental strand, 4624736 - 4624644
Alignment:
Q  431 ctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 523  Q
    |||||||||||| ||||| || |  |||| |||| |||||||   || |||||||||||||| ||||||||||||||||||||| || |||||    
T  4624736 ctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctaccccccatttt 4624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 502 - 558
Target Start/End: Complemental strand, 27307499 - 27307444
Alignment:
Q  502 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  27307499 ttttagtcctacctcctattttcaa-ctccagaaatgcagagaaatgacatttttag 27307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 565
Target Start/End: Complemental strand, 16753022 - 16752948
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttt 565  Q
    ||||| ||||| |||| | |||| ||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||    
T  16753022 ttttttttgcagttttagacctaactcctattttcaa-ctccagaaacgcagaaaaatggcagttttaggcagttt 16752948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 28290122 - 28290030
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  28290122 gaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28290030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 514
Target Start/End: Complemental strand, 13814190 - 13814155
Alignment:
Q  479 ttcaattatcatttttgttgcatttttcgtcctacc 514  Q
    |||||||||||||||||||||| |||||||||||||    
T  13814190 ttcaattatcatttttgttgcacttttcgtcctacc 13814155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Original strand, 16752680 - 16752741
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| ||| |||||||||||||| ||||||| ||||||| |||||||| ||||||||    
T  16752680 ttgcagtttttgtcatacctcctattttc-aactccataaacgcaaagaaatgatagttttag 16752741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 15029732 - 15029695
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| | |||||||||||||||    
T  15029732 tttcaaactccagaaacgcacataaatgacagttttag 15029695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 19291424 - 19291517
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || |||   |||| ||||| |||| ||| || |||||  |||| ||||||| ||||||| |||||||||||||||||    
T  19291424 gaacaaaatcgtccttaaactatatgtttttttgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttag 19291517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 28289807 - 28289844
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  28289807 tttccaactccagaaacgcacagaaatgacagttttag 28289844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 557
Target Start/End: Complemental strand, 8419098 - 8419008
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    ||||||||| |||||| || ||| |||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||| |||||    
T  8419098 gaacaaaatcgtccttaaactat-attttt-ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaatttta 8419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 558
Target Start/End: Complemental strand, 14340849 - 14340793
Alignment:
Q  502 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| |||||| |||||  |||| ||||||| ||||| |||||||||||||||||||    
T  14340849 ttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 1e-85; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 391 - 583
Target Start/End: Complemental strand, 19591076 - 19590884
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||||||||||||||||||||||  | |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  19591076 attttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 19590977  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19590976 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 19590884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 389 - 583
Target Start/End: Original strand, 32004606 - 32004800
Alignment:
Q  389 aaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatc 488  Q
    ||||| |||||||||||||||||||  |||||||| ||||| |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||    
T  32004606 aaattataggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatc 32004705  T
Q  489 atttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  32004706 atttttgttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacccctatgct 32004800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 391 - 583
Target Start/End: Complemental strand, 38859192 - 38859000
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||||||||||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  38859192 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcat 38859093  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  38859092 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 38859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 386 - 583
Target Start/End: Original strand, 2658828 - 2659025
Alignment:
Q  386 attaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaatt 485  Q
    ||||| || |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  2658828 attaatttctaggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaatt 2658927  T
Q  486 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| |||||| ||||||||    
T  2658928 atcatttttgttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctacacctatgct 2659025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 391 - 583
Target Start/End: Complemental strand, 37787318 - 37787126
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||||||||||||||| ||||||  |||||||| ||||| |||||||||||||||||||||| |||||| | |||||||||| ||| |||||||||||||    
T  37787318 attttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcat 37787219  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  37787218 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacccctatgct 37787126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 397 - 583
Target Start/End: Original strand, 35288903 - 35289089
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  || ||||  ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacccctatgct 35289089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 395 - 583
Target Start/End: Original strand, 34533789 - 34533977
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||| |||||| ||||||| ||||||||| ||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacccctatgct 34533977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 19830965 - 19830779
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| |||||||| |||||||||||| ||||||| |||| ||||||| ||| ||||||||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacccctatgct 19830779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 394 - 580
Target Start/End: Original strand, 23952727 - 23952914
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtc-tactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    ||||||||||||||||||||  |||||||| ||||  | ||||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctat 580  Q
    | ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  23952827 tggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttaggcagttttaaacctacccctat 23952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 416 - 583
Target Start/End: Original strand, 29099869 - 29100036
Alignment:
Q  416 tcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacct 515  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29099869 tcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacct 29099968  T
Q  516 cctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||  |||||| ||||||| |||||||    
T  29099969 cctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacctctatgct 29100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 400 - 583
Target Start/End: Complemental strand, 4641983 - 4641803
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||| ||||||||   |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||| |||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacatacctctatgct 4641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 19830418 - 19830580
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 19830580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 37786766 - 37786927
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  37786866 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 37786927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 397 - 558
Target Start/End: Original strand, 19590525 - 19590685
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||| ||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccatttt-attctccaaaaacccagagaaatgacagttttag 19590685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 35289448 - 35289286
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| |||| || ||||| |  ||| | |||||||||||||| | ||||||||    
T  35289348 gttgcatttttcgtcataccccccatttt-attctctaaaaacgcagagaaataatagttttag 35289286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 400 - 558
Target Start/End: Complemental strand, 29100393 - 29100236
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| |||||||||||||| ||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| |||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  29100293 attttttgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 29100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 38858642 - 38858803
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||| ||||||||  |||||||| |||||  ||||||||||||||||||||| |||||| |||||||||||| |||| |||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||| |||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  38858742 ttgcatttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 38858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 34534338 - 34534176
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||| ||||||  | |||||| ||||| ||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| |||  ||||||||||||||||||||    
T  34534238 gttgcatttttcgtcctaccccccatttt-attctccaaaaaaacagagaaatgacagttttag 34534176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 32005159 - 32004999
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  ||||| || |||||  ||||||||||||||||| |||||||||| || ||||||||| ||||||| |||||||||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||  || ||||| |  ||||| |||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttag 32004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 394 - 558
Target Start/End: Complemental strand, 2659388 - 2659225
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||| ||||  |||||| | ||||| ||| ||| |||||||||| |||||||||| |||||||||||| |||| |||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||| ||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  2659288 tgttgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 2659225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 4478247 - 4478085
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| |||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| || | |||  ||| |  ||||| |||||||||||||| ||||||||||    
T  4478147 gttgcatttttcgtcttatc-cctcattttattctccaaaaacgcagagaaataacagttttag 4478085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 403 - 558
Target Start/End: Complemental strand, 23953268 - 23953114
Alignment:
Q  403 attacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatt 502  Q
    |||||| ||||  |||||||| |||| |||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  503 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||| |||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  23953168 tttcgtcataccccccatttt-attctccaaaaacgcagagaaataacagttttag 23953114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 400 - 558
Target Start/End: Original strand, 4641443 - 4641600
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| |||||  ||||||||||||||||||||| |||||  |||| ||||||| |||| |||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| || ||||| |  ||||| ||| |||||||||||| ||||||||    
T  4641543 atttttcgtcctaccccccatttt-attctccaaaaatgcagagaaatgatagttttag 4641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 393 - 513
Target Start/End: Original strand, 38160947 - 38161067
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||||||||||  |||||| | ||||| |||||||||||| |  ||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  38160947 tttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattattt 38161046  T
Q  493 ttgttgcatttttcgtcctac 513  Q
    |||||||||||||||||||||    
T  38161047 ttgttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 398 - 523
Target Start/End: Complemental strand, 28584466 - 28584341
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||||||||  |||||||| ||||| ||| |||||||| ||||| || ||||||| ||||||||||||| |||||||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  498 gcatttttcgtcctacctcctatttt 523  Q
    | |||||||||| |||| || |||||    
T  28584366 gtatttttcgtcttaccccccatttt 28584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 395 - 523
Target Start/End: Original strand, 28583437 - 28583565
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| ||||||| || | |||| ||||||||||| |||| || ||||  ||||||||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  495 gttgcatttttcgtcctacctcctatttt 523  Q
     ||||||||||||||||||| || |||||    
T  28583537 attgcatttttcgtcctaccccccatttt 28583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 496 - 583
Target Start/End: Original strand, 4477800 - 4477887
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||| |||||||||||||||    
T  4477800 ttgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacccctatgct 4477887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 9181600 - 9181692
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || ||| |||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  9181600 gaacaaaatcgtccttaaactat-attttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 9181692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 558
Target Start/End: Original strand, 35578986 - 35579058
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| ||| ||||| ||||  |||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  35578986 tatcatgttttttgcagttttaatcctacatcctattttcaa-ctccagaaacgcagagaaatgacatttttag 35579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 557
Target Start/End: Original strand, 9393823 - 9393894
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    |||||| ||| ||||  |||| |||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  9393823 tatcatgttttttgctgttttagtcctacctcctattttcaa-ctccagaaacacagtgaaatgacagtttta 9393894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 558
Target Start/End: Complemental strand, 34595324 - 34595158
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc-cttttacaacagaacaaaatggtccttcaattatca 489  Q
    |||| ||||||||||||||||||  |||||    ||||  | |||||||||| |||||||||  |||||| | | ||||||||| |||| | || |||||    
T  34595324 atttaaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatc-gaacaaaatcgtccctaaactatca 34595226  T
Q  490 tttttgttgcatttttcgtcctacctcct-attttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    | ||| ||||| |||| || ||||| ||| |||||||| ||||||||||||| |||||||||||||||||    
T  34595225 tgttt-ttgcagttttagtgctacccccttattttcaa-ctccagaaacgcacagaaatgacagttttag 34595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 558
Target Start/End: Original strand, 7732483 - 7732648
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc-cttttacaacagaacaaaatggtccttcaattatcat 490  Q
    ||||||||||||||||| ||||  |||| |   |||| || |||||||||| ||||||| || |||||| | | ||||||||| |||||| || ||| ||    
T  7732483 ttttaggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccttaaactat-at 7732580  T
Q  491 ttttgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
     ||| ||||| |||| |||||| |||| ||||||||| ||||| ||||||| | |||||||||||||||    
T  7732581 gttttttgcagttttagtcctatctccctattttcaa-ctccataaacgcacataaatgacagttttag 7732648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 558
Target Start/End: Complemental strand, 32427461 - 32427406
Alignment:
Q  502 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||| |||||||||||||| ||| | |||||||||||||||||||||||||    
T  32427461 ttttagtccttcctcctattttcaa-ctctaaaaacgcagagaaatgacagttttag 32427406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 558
Target Start/End: Original strand, 27245297 - 27245364
Alignment:
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||| |||| |||||| |||||  |||| ||||||||||||||| |||||||| ||||||||    
T  27245297 tttttttgcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttag 27245364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 558
Target Start/End: Complemental strand, 48248148 - 48247977
Alignment:
Q  387 ttaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaatta 486  Q
    |||||||||||||||||||||||||||  ||||     ||||  | |||||| ||| |||||||  | ||||  ||  ||||||||| |||||| || ||    
T  48248148 ttaaattttaggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 48248049  T
Q  487 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |   |||| ||||| |||| |||| | ||||   |||| ||||||||||||||| |||||||||||||||||    
T  48248048 tatgtttttttgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttag 48247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 26026437 - 26026478
Alignment:
Q  516 cctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  26026437 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 26026478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 25637676 - 25637584
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| |||||| ||||   |||| |||||||||||| || |||||||||||||||||    
T  25637676 gaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 25637584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 26048071 - 26048108
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  26048071 tttccaactccagaaacgcacagaaatgacagttttag 26048108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 28687922 - 28687885
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  28687922 tttccaactccagaaacgcacagaaatgacagttttag 28687885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 558
Target Start/End: Complemental strand, 35579344 - 35579272
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| ||| ||||| |||| ||| |||||||||||||| ||||| | |||||||| ||||| ||||||||||    
T  35579344 tatcatgttttttgcagttttagtcatacctcctattttc-aactctaaaaacgcagggaaataacagttttag 35579272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 558
Target Start/End: Complemental strand, 24929757 - 24929689
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||| ||||||| |||||||||||||||||    
T  24929757 ttttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttag 24929689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 558
Target Start/End: Complemental strand, 33881038 - 33880971
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| ||| || | ||||||||||| ||||||||||||| | |||||||||||||||    
T  33881038 ttttttttgcagttttagtcttatcccctattttcaa-ctccagaaacgcacataaatgacagttttag 33880971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 9e-84; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 386 - 583
Target Start/End: Original strand, 22434168 - 22434365
Alignment:
Q  386 attaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaatt 485  Q
    |||||||||| |||||||||||||||||  |||||||| |||||  |||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  22434168 attaaatttttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 22434267  T
Q  486 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22434268 atcatttttgttgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 22434365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 397 - 583
Target Start/End: Complemental strand, 45082969 - 45082783
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| |||||  ||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 45082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 397 - 583
Target Start/End: Original strand, 46193405 - 46193591
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 46193591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 395 - 583
Target Start/End: Original strand, 15523233 - 15523421
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 15523421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 394 - 583
Target Start/End: Complemental strand, 20471059 - 20470870
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  |||||||| ||||| ||||| |||||||||||| | |||||||| |||||||||||| |||| |||||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttt 20470960  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  20470959 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatgct 20470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 397 - 583
Target Start/End: Original strand, 25447247 - 25447433
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctacccatatgct 25447433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 394 - 583
Target Start/End: Complemental strand, 23494991 - 23494802
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| | ||||||| || ||||||||||||||| |||||||||||||||    
T  23494891 tgttgcatttttcgtcctacatcctattctcaaactccagaaacgtaaagaaatggcaattttaggcggttttagacctacccctatgct 23494802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 391 - 583
Target Start/End: Complemental strand, 4220110 - 4219918
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||||||| ||||||||||||||  |||||||| ||||| ||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||||    
T  4220110 attttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcat 4220011  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  4220010 ttttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacccacccctatgct 4219918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 395 - 583
Target Start/End: Complemental strand, 51021342 - 51021155
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||| |||| ||||||| ||||||| ||||||||||||     
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt- 51021244  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacccctatgct 51021155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 397 - 583
Target Start/End: Complemental strand, 12234874 - 12234688
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||| ||||||  |||||||| ||||| ||||||||||||||| || |||||||||| |||||||||||| |||||||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacccctatgct 12234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 400 - 578
Target Start/End: Complemental strand, 48526723 - 48526545
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||| ||||||  |||||||| |||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccct 578  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctacccct 48526545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 395 - 583
Target Start/End: Original strand, 54995067 - 54995255
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||||||||  ||||||||  |||| |||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| ||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctacccttatgct 54995255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 396 - 583
Target Start/End: Original strand, 11153145 - 11153332
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||| ||||||  |||||||| ||||| |||||||| ||| ||||| |||||||||| || |||| |||| ||||||||||||||||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 11153332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 399 - 583
Target Start/End: Original strand, 2118295 - 2118480
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||| ||| ||||| |||||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctac-ccctatgct 583  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||| |||||| |||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctactccctatgct 2118480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 383 - 583
Target Start/End: Complemental strand, 25938230 - 25938030
Alignment:
Q  383 accattaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttca 482  Q
    ||||||||| |  ||||||||||||||||||  |||| ||| ||||| |||||||||||| |||||||||||||||| ||||||||||||  ||||||||    
T  25938230 accattaaaataaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttca 25938131  T
Q  483 attatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgc 582  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||| ||||||| ||||||    
T  25938130 attatcatttttgttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgc 25938031  T
Q  583 t 583  Q
    |    
T  25938030 t 25938030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 400 - 583
Target Start/End: Original strand, 18751602 - 18751785
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||| |||||||  ||||||||| |||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacccctatgct 18751785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 432 - 583
Target Start/End: Original strand, 12503471 - 12503622
Alignment:
Q  432 tactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcc 531  Q
    |||||||||||||| ||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12503471 tactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcc 12503570  T
Q  532 agaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  12503571 agaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 12503622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 15523780 - 15523619
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  || ||||| ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||| |||||||||||||||||    
T  15523680 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttag 15523619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 25447783 - 25447621
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  || ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||  | ||||| |  ||||| |||||||||||||| ||||||||||    
T  25447683 gttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaattacagttttag 25447621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 391 - 558
Target Start/End: Original strand, 25937664 - 25937830
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||||||||||||||||| ||||  |||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  25937664 attttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 25937763  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| |||||  | || ||||| |  ||||| |||||||||||||||||||||||||    
T  25937764 ttttgttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 25937830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 399 - 558
Target Start/End: Original strand, 33109686 - 33109844
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||| ||||  |||||||| |||||  ||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  33109786 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 33109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 399 - 558
Target Start/End: Complemental strand, 38962362 - 38962204
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||| ||||  |||||||| ||||||||| ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || ||||| |  || || |||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccatttt-attcttcaaaaacgcagagaaatgacagttttag 38962204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 11153697 - 11153532
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||    
T  11153697 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatt 11153598  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||||  | ||||| |  ||||| |||||||||||||| ||||||||||    
T  11153597 tttgttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaataacagttttag 11153532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 394 - 557
Target Start/End: Original strand, 12234326 - 12234488
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  ||||| || |||||  || ||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 12234425  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  12234426 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 399 - 558
Target Start/End: Complemental strand, 46193948 - 46193790
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || ||||| |  ||||| ||||| |||||| ||||||||||||    
T  46193848 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaattgacagttttag 46193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 393 - 558
Target Start/End: Complemental strand, 22434725 - 22434563
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||| ||||||||| ||||  |||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||||    
T  22434725 tttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttta-aacagaacaaaacggtcattcaattatcattt 22434627  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  22434626 ttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 22434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 395 - 523
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  ||||| || ||||| || ||||||||| |||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  495 gttgcatttttcgtcctacctcctatttt 523  Q
    |||||||||||||||||||||||||||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 399 - 558
Target Start/End: Original strand, 23494445 - 23494603
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||| ||||  |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || ||||| |  ||||| | |||||||||||||||||||||||    
T  23494545 catttttcgtcctaccccccatttt-attctccaaacacgcagagaaatgacagttttag 23494603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 399 - 557
Target Start/End: Original strand, 4219559 - 4219716
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||| ||||  |||||||| ||||| ||||||||||||||||||||||| ||||| || | |||||||  ||||||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  4219659 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 392 - 558
Target Start/End: Original strand, 51020792 - 51020957
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    |||||||||||||||||||||| |||||| || |||||   | |||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  51020792 ttttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatt 51020891  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||||| || ||||| |  || || ||||| |||||||||||||||||||    
T  51020892 tttgttgcatttttcgtcctaccccccatttt-attcttcaaaaacgtagagaaatgacagttttag 51020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 48526195 - 48526355
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  | |||||| ||||  ||||||| ||||||||  ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  48526295 ttgcatttttcgtcctacc-cccatttt-attctccaaaaatgcagagaaatgacagttttag 48526355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 22170482 - 22170322
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||  ||||| |||||| || ||||||| ||||| |||| ||||||| |||| |||||||||||||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  22170383 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 22170322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 394 - 511
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    |||| |||||||||||||||  |||||||| ||||| |||||||||||||||||| || ||||||| ||||||||||||||||| ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  494 tgttgcatttttcgtcct 511  Q
    ||||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 393 - 514
Target Start/End: Complemental strand, 20958408 - 20958288
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||| ||||||||||||||||| |||||||  ||||| |||||||||||| |||||||||||||||| |||||||||||   ||||||||||||||||||    
T  20958408 tttacgcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcattt 20958309  T
Q  493 ttgttgcatttttcgtcctacc 514  Q
    ||||||||||||| ||||||||    
T  20958308 ttgttgcattttt-gtcctacc 20958288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 394 - 558
Target Start/End: Original strand, 45082429 - 45082590
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||| |||||||| |||||  || ||||| ||||||||||||||||| |||||  |||||||||| || ||||||||| ||||||||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||| ||||||    
T  45082528 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacacagagaaatgacaattttag 45082590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 48713893 - 48713777
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||||||||||| |||||| ||| | ||||||| |||| ||||| ||| |||||| ||||||||||||| ||||||||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  495 gttgcatttttcgtcct 511  Q
    |||||||||||||||||    
T  48713793 gttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 54995614 - 54995453
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||||||||  |||||||| ||||| ||||||||||||||| || |||||||||| || ||||||||| |||||||||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||| | || ||||| |  ||| | ||||||| |||||||| ||||||||    
T  54995515 gttgcatttttcgtcctaacccccatttt-attctctaaaaacgcaaagaaatgatagttttag 54995453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 558
Target Start/End: Complemental strand, 2118837 - 2118681
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  || ||||| ||||| || |||| ||||||||||||  ||||||| |||| ||||||| |||| |||||||||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  2118737 atttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaataatagttttag 2118681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 514
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccctttt-acaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||| ||||| | || | ||||||| |||| |||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  496 ttgcatttttcgtcctacc 514  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 514
Target Start/End: Complemental strand, 43243806 - 43243708
Alignment:
Q  416 tcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacc 514  Q
    |||||||| ||||| |||||||||||| ||||| |||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  43243806 tcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 400 - 523
Target Start/End: Original strand, 16690939 - 16691062
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||| ||||  |||| ||| |||| ||||||||||||| ||||||||||  |||| |||| ||||||||  ||||||||||||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  500 atttttcgtcctacctcctatttt 523  Q
    ||||||||||||||| || |||||    
T  16691039 atttttcgtcctacccccgatttt 16691062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 525
Target Start/End: Complemental strand, 10258433 - 10258304
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| | ||| ||||||| |||| |||||||||||||||| ||||||  ||||| ||  |||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  496 ttgcatttttcgtcctacctcctattttca 525  Q
    ||||| |||| ||| |||| ||||||||||    
T  10258333 ttgcagttttagtcttaccccctattttca 10258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 16691616 - 16691491
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    ||||||||||||||||| ||||  ||| ||||  |||||||||||| ||||||||||  |||| |||| |||||||| |||||| |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctcttta-aacataacaaaattgtcctttaattattatttttgt 16691518  T
Q  497 tgcatttttcgtcctacctcctatttt 523  Q
    ||||||||||||| ||||||| |||||    
T  16691517 tgcatttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 48293592 - 48293708
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| |||||  ||||||||||| || ||||| |  |||| |||| |||||||| || |||||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  495 gttgcatttttcgtcct 511  Q
    |||||||||||| ||||    
T  48293692 gttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 416 - 523
Target Start/End: Complemental strand, 43281316 - 43281210
Alignment:
Q  416 tcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacct 515  Q
    |||||||| ||||| |||||||||||| ||||| |||| ||||| ||||||||||||  || |||||||||| ||||||||||||||||||||||||||     
T  43281316 tcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctaccc 43281218  T
Q  516 cctatttt 523  Q
    || |||||    
T  43281217 cccatttt 43281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 48295088 - 48294961
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||| ||||  || ||||| |||| ||||||||||||| ||||| ||||  |||| |||| |||||||| ||| ||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  497 tgcattttt-cgtcctacctcctatttt 523  Q
    ||||||||| ||||||||| || |||||    
T  48294988 tgcatttttccgtcctaccccccatttt 48294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 12503913 - 12503821
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 12503821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 398 - 514
Target Start/End: Complemental strand, 44892692 - 44892576
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||| | ||||  |||||||| ||||  |||||||||||| |||| ||||| ||||| ||||||||||||  ||| |||||||||  ||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  498 gcatttttcgtcctacc 514  Q
    |||||||||||||||||    
T  44892592 gcatttttcgtcctacc 44892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 395 - 503
Target Start/End: Original strand, 48708293 - 48708401
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||  ||| ||||| |||  ||||||| || ||||||||||||| |||| |||||||  ||||||||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  495 gttgcattt 503  Q
    |||||||||    
T  48708393 gttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 455 - 523
Target Start/End: Original strand, 43242328 - 43242396
Alignment:
Q  455 ttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 523  Q
    ||||| |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 558
Target Start/End: Original strand, 17504061 - 17504133
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  17504061 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttag 17504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 432 - 509
Target Start/End: Original strand, 20957224 - 20957301
Alignment:
Q  432 tactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtc 509  Q
    ||||||||||| ||||| | | |||||| |||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  20957224 tactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcatttttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaa 467  Q
    ||||||||||||||||||  |||||||| ||||| |||||||| |||||| ||||||||||||| |||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 523
Target Start/End: Original strand, 44890518 - 44890643
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||| ||||  |||| ||| ||||  ||| |||||||| ||||| |||||||||| ||||||||||||   ||||| ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  498 gcatttttcgtcctacctcctatttt 523  Q
    ||||||||| || |||| || |||||    
T  44890618 gcatttttcatcataccccccatttt 44890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 17504407 - 17504345
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| || ||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  17504407 ttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagttttag 17504345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 558
Target Start/End: Original strand, 35193406 - 35193467
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaa-cttcagaaacgcagagaaatgacagttttag 35193467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 514
Target Start/End: Complemental strand, 44220858 - 44220805
Alignment:
Q  461 aacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacc 514  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||| |||||    
T  44220858 aacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacc 44220805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 505
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||| | |||| ||||||||| ||||  ||| |||  ||| ||||  |||||||||| || |||||||||| ||| |||||||||||||||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  497 tgcattttt 505  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 567
Target Start/End: Complemental strand, 40160549 - 40160468
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggtttta 567  Q
    |||||| ||| ||||| |||| ||| |||||||||||||||| ||||||||||| |||||||   ||||||||||| ||||||    
T  40160549 tatcatgttttttgcagttttagtcttacctcctattttcaa-ctccagaaacgtagagaaaatgcagttttaggcagtttta 40160468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 539 - 577
Target Start/End: Complemental strand, 10795730 - 10795692
Alignment:
Q  539 cagagaaatgacagttttaggcggttttaaacctacccc 577  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  10795730 cagagaaatgacagttttaggcagttttagacctacccc 10795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 12593143 - 12593184
Alignment:
Q  516 cctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  12593143 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 12593184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Original strand, 14439926 - 14439988
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  14439926 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 14439988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 18965208 - 18965300
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcct-attttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || |||||| ||| ||||| |||| || ||||||||| |||||||| ||| ||||||||| | |||||||||||||||    
T  18965208 gaacaaaatcgtccttaaactatcatgttt-ttgcagttttagttctacctccttattttcaa-ctctagaaacgcatataaatgacagttttag 18965300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 46736774 - 46736815
Alignment:
Q  516 cctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  46736774 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 46736815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 558
Target Start/End: Complemental strand, 229636 - 229545
Alignment:
Q  466 aacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcct-attttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||| |||||| || |||||| ||| ||||| ||||  ||||||||||| |||||||| ||||||||||||| |||| ||||| ||||||    
T  229636 aacaaaatcgtccttaaactatcatgttt-ttgcagttttaatcctacctccttattttcaa-ctccagaaacgcacagaagtgacaattttag 229545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 26974407 - 26974444
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  26974407 tttccaactccagaaacgcacagaaatgacagttttag 26974444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 34789450 - 34789542
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| |||||| ||||   |||||||||||||||||||| | |||||||| ||||||    
T  34789450 gaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttag 34789542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 45838970 - 45838933
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  45838970 tttccaactccagaaacgcacagaaatgacagttttag 45838933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 558
Target Start/End: Complemental strand, 46737073 - 46737041
Alignment:
Q  526 aactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| |||||||||||||||||    
T  46737073 aactccagaaacgcacagaaatgacagttttag 46737041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 5e-82; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 393 - 583
Target Start/End: Complemental strand, 22219902 - 22219712
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  22219902 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 22219803  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  22219802 ttgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacccctatgct 22219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 388 - 583
Target Start/End: Complemental strand, 11445541 - 11445346
Alignment:
Q  388 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattat 487  Q
    |||| |||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  11445541 taaaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattat 11445442  T
Q  488 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  11445441 catttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacccacccctatgct 11445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 394 - 583
Target Start/End: Original strand, 12935154 - 12935343
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagatatacccctatgct 12935343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 396 - 583
Target Start/End: Original strand, 31470314 - 31470501
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||| |||||| ||||||||||||  ||| ||||||||| |||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacccctatgct 31470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 20741650 - 20741460
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||| ||  |||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||     
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  496 tt---gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 20741460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 395 - 583
Target Start/End: Complemental strand, 23075675 - 23075487
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||| |||||||| ||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctacccttatgct 23075487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 400 - 558
Target Start/End: Original strand, 10899942 - 10900100
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  || ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 10900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 400 - 583
Target Start/End: Original strand, 18504922 - 18505105
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| ||||| |||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttaggcgattttagacctacccctatgct 18505105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 394 - 583
Target Start/End: Original strand, 2319669 - 2319857
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||| ||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||| || ||||| |  |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  2319769 tgttgcatttttcgtcctaccccccatttt-attctccagaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 2319857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 397 - 583
Target Start/End: Complemental strand, 18257682 - 18257496
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||| ||||||  |||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    | |||||||||||||||||| ||||||| ||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttaggcggttttagacctacccctatgct 18257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 396 - 560
Target Start/End: Original strand, 11276589 - 11276753
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    |||||||||||||| |||| ||| |||| ||||||||||||| ||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggc 560  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggc 11276753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 20741098 - 20741260
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 20741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 398 - 577
Target Start/End: Original strand, 15827639 - 15827819
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaat--ggtccttcaattatcatttttg 495  Q
    ||||||||||||||||  |||||||| |||||  |||||||||||||||| ||| ||||||| |||| |||||| |  |||||||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccc 577  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || ||||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca-ttttaggcggttttagacttacccc 15827819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 18257135 - 18257297
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  18257235 gttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 18257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 10900480 - 10900315
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    |||| |||||||||||||||||  |||||||  ||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||    
T  10900480 tttttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatt 10900381  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  10900380 tttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 10900315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 397 - 583
Target Start/End: Complemental strand, 4811801 - 4811616
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||| |||||| ||||||||| ||||| ||||||| ||||||| || |||  ||||| |||||||||||| |||||||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||| || |||||||||||||||||| ||| ||||||||| ||||| || |||||||  |||||| |||||||||||||||    
T  4811701 tgcatttttcatcatacctcctattttcaaaccccataaacgcaga-aaatggcaattttaggtagttttagacctacccctatgct 4811616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 388 - 558
Target Start/End: Original strand, 11444978 - 11445147
Alignment:
Q  388 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattat 487  Q
    ||||||||||||||||||||||||||  |||||||| ||||| ||||||||||| |||||||||||| |||| ||||||| |||||||||||||||||||    
T  11444978 taaattttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattat 11445077  T
Q  488 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||||||||  | ||||| |  ||| | |||| ||||||||||||||||||||    
T  11445078 catttttgttgcatttttcgtcctaccctccatttt-attctctaaaaacacagagaaatgacagttttag 11445147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 11277127 - 11276967
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| |||||  |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccatttt-attctccaaaaacgaagagaaatgacagttttag 11276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 393 - 558
Target Start/End: Original strand, 28472633 - 28472796
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||||||||||  |||||||| ||||| | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  28472633 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattt 28472732  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  28472733 ttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 28472796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 393 - 558
Target Start/End: Original strand, 29859822 - 29859985
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||||||||||  |||||||| ||||| | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  29859822 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattt 29859921  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  29859922 ttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 29859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 15828187 - 15828026
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||| | |||||||| |||| ||||||| ||||||||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  15828087 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 15828026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 393 - 558
Target Start/End: Complemental strand, 31470865 - 31470701
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||| ||||||||||||||||  |||| ||| ||| | ||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcattt 31470766  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  31470765 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacaattttag 31470701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 12935704 - 12935542
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| || || |||||||||||| |||||||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||| |||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccatttt-attctccataaacacagagaaatgacagttttag 12935542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 398 - 557
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||| ||||||  |||||||| ||||||||||||||||||||| ||||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  498 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    ||||||||||||||||| || ||||| |  |||||  |||| ||||||||||||||||||    
T  18505363 gcatttttcgtcctaccccccatttt-attctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 1149977 - 1149816
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||| | ||||||| |||||||||| |||||||||| || ||||||||| ||||||||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  497 tgcatttttcgtcctacctcctattttcaaactcc-agaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||| || ||||| |  |||| | |||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatgacagttttag 1149816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 400 - 558
Target Start/End: Complemental strand, 2322760 - 2322604
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  || ||||| |||||||||||||||||||| ||| |||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| |||  ||| |  ||||| |||| ||||||||||||||||||||    
T  2322660 atttttcgtcctacc-cctcattttattctcca-aaacacagagaaatgacagttttag 2322604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaatt 485  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 396 - 494
Target Start/End: Original strand, 23073998 - 23074096
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 397 - 558
Target Start/End: Original strand, 4811372 - 4811532
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||  ||  |||||||||||||||||||||||| |||||||||| || |||| |||| |||||||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    | ||||||||||| |||| || ||||| |  || || ||||||||| |||| ||||||||||    
T  4811472 ttcatttttcgtcttaccccccatttt-attcttcaaaaacgcagataaataacagttttag 4811532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 399 - 510
Target Start/End: Complemental strand, 29035180 - 29035069
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| ||| | |||||||||||| ||||  |||||||||| ||||||||||||| |||||| | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  499 catttttcgtcc 510  Q
    ||||||||||||    
T  29035080 catttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 29033436 - 29033560
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||  ||||| || ||||||||| |||||||||||||||| ||||||||||||  |||||||| |||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  499 catttttcgtcctacctcctatttt 523  Q
    ||  |||| ||||||| || |||||    
T  29033536 cacatttcatcctaccccccatttt 29033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 523
Target Start/End: Complemental strand, 3835268 - 3835145
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||  ||| ||||  |||||||||||| ||||||||||  |||| ||||||||||||| |||||| ||||||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  500 atttttcgtcctacctcctatttt 523  Q
    ||||||||||||||| || |||||    
T  3835168 atttttcgtcctaccccccatttt 3835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 392 - 514
Target Start/End: Original strand, 18296140 - 18296262
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||| | ||||| |||||||| ||||   ||||||| ||| || |  |||||||||| ||||||||||||  |||||||| ||||||||    
T  18296140 ttttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatt 18296239  T
Q  492 tttgttgcatttttcgtcctacc 514  Q
    |||||||||||||||||||||||    
T  18296240 tttgttgcatttttcgtcctacc 18296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 560
Target Start/End: Complemental strand, 35163639 - 35163570
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggc 560  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacacagagaaatgacagttttaggc 35163570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 583
Target Start/End: Original strand, 1149558 - 1149614
Alignment:
Q  527 actccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||| |||||||||  |||||||||||| ||||| |||||||||||||||    
T  1149558 actccagaaacacagagaaatagcagttttaggcgattttagacctacccctatgct 1149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 576
Target Start/End: Original strand, 32836114 - 32836179
Alignment:
Q  510 ctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctaccc 576  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||| |  ||||| ||||||||    
T  32836114 ctacctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctaccc 32836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 558
Target Start/End: Original strand, 31573817 - 31573885
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  31573817 ttttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttag 31573885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 5114467 - 5114628
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||| |||| |||||     |||| || |||||||||| |||||||  | ||||  ||  ||||||||| |||||| || ||| || |||     
T  5114467 aggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 5114565  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||   |||| |||||||||||| || |||||||||||||||||    
T  5114566 ttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 5114628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 25472491 - 25472398
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || |||   |||| ||||| |||| |||||| ||||   |||| | ||||||||||||| |||||||||||||||||    
T  25472491 gaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttag 25472398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 28636619 - 28636582
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  28636619 tttccaactccagaaacgcacagaaatgacagttttag 28636582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 29891558 - 29891466
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||| ||||||||    
T  29891558 gaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttag 29891466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 31073565 - 31073528
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  31073565 tttccaactccagaaacgcacagaaatgacagttttag 31073528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 25468943 - 25469010
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    ||||| ||||| |||| |||||| |||| |||||| ||| |||||||||||| ||||||||||||||||    
T  25468943 tttttcttgcagttttagtcctatctccctatttt-aaattccagaaacgcacagaaatgacagtttta 25469010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 539 - 583
Target Start/End: Complemental strand, 28473041 - 28472997
Alignment:
Q  539 cagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||| |||||||||||||||| ||||||| |||||||| ||||||    
T  28473041 cagaaaaatgacagttttagggggttttagacctacccatatgct 28472997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 5e-82; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 393 - 583
Target Start/End: Complemental strand, 43058881 - 43058692
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  43058881 tttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcattt 43058782  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  43058781 t-gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 43058692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 396 - 583
Target Start/End: Original strand, 18450829 - 18451016
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||     
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 18451016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 392 - 583
Target Start/End: Complemental strand, 7446896 - 7446705
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||| |||| ||||||||| ||||   |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  7446896 ttttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 7446797  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  7446796 tttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctactcatatgct 7446705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 395 - 583
Target Start/End: Complemental strand, 22374872 - 22374684
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagaccttcccctatgct 22374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 399 - 583
Target Start/End: Original strand, 40815347 - 40815531
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||| ||||||| ||| |||||||||||||||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 40815531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 28617160 - 28616973
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattttagacctacccctatgct 28616973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 398 - 583
Target Start/End: Complemental strand, 239896 - 239711
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||| ||||||||||  |||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  498 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| | |||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctaactctatgct 239711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 395 - 583
Target Start/End: Complemental strand, 11091067 - 11090879
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctacccatatgct 11090879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 400 - 581
Target Start/End: Complemental strand, 40027682 - 40027501
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 581  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||| |||||||| ||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctacccatatg 40027501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 390 - 558
Target Start/End: Complemental strand, 26538631 - 26538463
Alignment:
Q  390 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatca 489  Q
    ||||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  26538631 aattttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatca 26538532  T
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||    
T  26538531 tttttgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttag 26538463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 395 - 583
Target Start/End: Complemental strand, 1978656 - 1978468
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||| ||| ||||| |||||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||| |||||||||||||||||||||||| |||||| || ||||||| |||||||| ||||||||| ||||||| |||||||    
T  1978556 gttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 1978468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 392 - 583
Target Start/End: Complemental strand, 14432691 - 14432500
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    |||||| |||||||||| ||||  |||||||| ||||| ||||||| |||||||||| |||| ||||| ||||||| |||||||| |||||||||| |||    
T  14432691 ttttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatt 14432592  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  14432591 tttgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcgaatttagacctacccttatgct 14432500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 392 - 583
Target Start/End: Complemental strand, 3026011 - 3025822
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    |||| |||||||||||| ||||  |||||||| |||||  ||||||||||| |||| ||||||||||| |||| ||||||| |||||||||||||| |||    
T  3026011 tttttggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatt 3025914  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| |||||||| ||||||    
T  3025913 tttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctacccatatgct 3025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 400 - 576
Target Start/End: Original strand, 8425358 - 8425533
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||| ||| ||||| |||||||||||| ||||| | || ||||| |||||||||||| |||| |||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctaccc 576  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctaccc 8425533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 11090519 - 11090681
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||||||||  |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 11090681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 18451381 - 18451216
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  18451381 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatt 18451282  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| ||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  18451281 tttgttgcatttttcttcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 18451216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 394 - 558
Target Start/End: Original strand, 239350 - 239512
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  || ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  239449 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 239512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 22374318 - 22374480
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||| |||||||| ||||||||    
T  22374418 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgatagttttag 22374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 40815895 - 40815730
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||| ||||||||||||||  |||||||| ||||| |||||||||||||||||  |||||||||| |||||||||||| || |||||||||||||||    
T  40815895 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatt 40815796  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  40815795 tttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 40815730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 391 - 558
Target Start/End: Original strand, 40027134 - 40027300
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||| ||||||||||||||||||  || ||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||    
T  40027134 atttaaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 40027233  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| ||||||||  | ||||| |  ||||| |||||||||||||||||||||||||    
T  40027234 ttttgttgcattttttgtcctaccctccatttt-attctccaaaaacgcagagaaatgacagttttag 40027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 397 - 558
Target Start/End: Original strand, 43058333 - 43058493
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    ||||||||||||||||| ||||||||| ||||| | |||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||| ||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 43058493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 1978106 - 1978268
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||| ||||  |||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||| |||||  | || ||||| |  ||||| |||||||||||||||||||||||||    
T  1978206 gttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 1978268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 396 - 554
Target Start/End: Original strand, 7446341 - 7446497
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||| |||| ||||||||||||||||     
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 554  Q
    |||||||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||    
T  7446441 ttgcatttttcgtcatacc-cccatttt-attctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 26538096 - 26538257
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| |||||  |||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| ||||||||| ||||||||||    
T  26538196 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaataacagttttag 26538257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 391 - 523
Target Start/End: Original strand, 28616607 - 28616739
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    ||||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||    
T  28616607 atttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcat 28616706  T
Q  491 ttttgttgcatttttcgtcctacctcctatttt 523  Q
    |||||||||| ||||||||||||| || |||||    
T  28616707 ttttgttgcaattttcgtcctaccccccatttt 28616739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 395 - 515
Target Start/End: Complemental strand, 28847242 - 28847122
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||| ||||  |||||||| |||||||||||||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  495 gttgcatttttcgtcctacct 515  Q
    |||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 400 - 558
Target Start/End: Complemental strand, 8425902 - 8425745
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  | || ||| |||||||||||||||||| |||||||||||||||| || |||||||||  |||||||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaatttt-attctccaaaaacgcagagaaatgacagttttag 8425745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 396 - 523
Target Start/End: Original strand, 20444748 - 20444875
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  496 ttgcatttttcgtcctacctcctatttt 523  Q
    ||||| ||||||||||||| || |||||    
T  20444848 ttgcagttttcgtcctaccccccatttt 20444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 400 - 558
Target Start/End: Original strand, 14432145 - 14432302
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||| ||||||| |||||||||| |||||||||| || | ||||||| |||||||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| |||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 14432302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 394 - 558
Target Start/End: Original strand, 3025463 - 3025625
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||| || |||||| ||||  |||||||| ||||| |||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||| || ||||| |  ||| | ||||||| |||||||||||||||||    
T  3025563 tgttgcatttttcgtcctacc-cccatttt-attctcaaaaaacgcaaagaaatgacagttttag 3025625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 20440581 - 20440461
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||||||||  |||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||    
T  20440581 ttttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatt 20440482  T
Q  492 tttgttgcatttttcgtccta 512  Q
    ||||||||| |||||||||||    
T  20440481 tttgttgcagttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 398 - 512
Target Start/End: Complemental strand, 35781207 - 35781093
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||| ||||| |||||||||| ||||||||||||   ||||||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  498 gcatttttcgtccta 512  Q
    |||||||||||||||    
T  35781107 gcatttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 35779708 - 35779834
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||   ||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  497 tgcatttttcgtcctacctcctatttt 523  Q
    ||||||||| |||||||| || |||||    
T  35779808 tgcattttttgtcctaccccccatttt 35779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 8972239 - 8972363
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| |||||  | ||||||||| ||||| |||||||| | ||||||||||||| ||| ||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  499 catttttcgtcctacctcctatttt 523  Q
    |||||||||| ||||| ||||||||    
T  8972339 catttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 399 - 510
Target Start/End: Original strand, 15551501 - 15551612
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| |||||| ||||||||||| ||||| |||| ||||| |||| |||||||  |||||||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  499 catttttcgtcc 510  Q
    ||||||||||||    
T  15551601 catttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 399 - 514
Target Start/End: Complemental strand, 15552596 - 15552482
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  || |  || ||||| |||||||||||| || ||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  499 catttttcgtcctacc 514  Q
     |||||||||||||||    
T  15552497 tatttttcgtcctacc 15552482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 434 - 558
Target Start/End: Complemental strand, 28143538 - 28143416
Alignment:
Q  434 ctcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccag 533  Q
    ||||||||| ||||||||||  |||  ||  ||||||||| |||| | || |||||| ||| ||||| |||| ||||||| |||||||||||| ||||||    
T  28143538 ctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt-ttgcagttttagtcctacgtcctattttcaa-ctccag 28143441  T
Q  534 aaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||||||    
T  28143440 aaacgcagagaaatgacagttttag 28143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 496 - 556
Target Start/End: Complemental strand, 31797225 - 31797166
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 556  Q
    ||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31797225 ttgcagttttagtcctacctcctattttcaa-ctctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 44219712 - 44219804
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| |||||| || ||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  44219712 gaacaaaattgtccttaaattat-atgttttttgcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttag 44219804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 14942324 - 14942230
Alignment:
Q  465 gaacaaaatggtccttcaattatcat--ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||| | |||||||||  |||| ||||| |||| ||||||| |||||||||||| ||||||||| ||||||||||  |||||||||    
T  14942324 gaacaaaattgtccataaattatcatgttttttttgcagttttagtcctacatcctattttcaa-ctccagaaatgcagagaaatcgcagttttag 14942230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 433 - 558
Target Start/End: Original strand, 62993 - 63117
Alignment:
Q  433 actcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcca 532  Q
    |||||||||| ||||||| || ||||| ||  ||||||||| |||||| || ||| || ||| ||||| |||| |||||| ||||   |||| ||||| |    
T  62993 actcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactcaa 63091  T
Q  533 gaaacgcagagaaatgacagttttag 558  Q
    |||||||| | |||||||||||||||    
T  63092 gaaacgcacataaatgacagttttag 63117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 20128288 - 20128123
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc-cttttacaacagaacaaaatggtccttcaattatcat 490  Q
    ||||||||||||||||||||||  |||| |   |||   | |||||||||| ||||||| || |||||| | || |||||||| |||||| || ||| ||    
T  20128288 ttttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatca-aacaaaatcgtccttaaactat-at 20128191  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
     ||| ||||| |||| |||||| ||||   |||| ||||||||||||||| | |||||||||||||||    
T  20128190 gttttttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 20128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 496 - 558
Target Start/End: Original strand, 33920710 - 33920772
Alignment:
Q  496 ttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| |||| ||||||||| ||||||||||||| |||||||||||||||||    
T  33920710 ttgcagttttagtcctatctccctattttcaa-ctccagaaacgcatagaaatgacagttttag 33920772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 5560998 - 5560936
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  5560998 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 5560936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Original strand, 13399520 - 13399582
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  13399520 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 13399582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 15550793 - 15550834
Alignment:
Q  516 cctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  15550793 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 15550834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 43160463 - 43160397
Alignment:
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  43160463 tttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 43160397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 4356179 - 4356142
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  4356179 tttccaactccagaaacgcacagaaatgacagttttag 4356142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 4809002 - 4809039
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  4809002 tttccaactccagaaacgcacagaaatgacagttttag 4809039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 6949519 - 6949612
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || |||   |||| ||||| |||| |||||| ||||   |||| ||||||| ||||||| |||||||||||||||||    
T  6949519 gaacaaaatcgtcctttaactatatgtttttttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttag 6949612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 11539705 - 11539798
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || |||   |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| | |||||||||||||||    
T  11539705 gaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttag 11539798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 11540061 - 11540024
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  11540061 tttccaactccagaaacgcacagaaatgacagttttag 11540024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 16175828 - 16175735
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || |||   |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| | |||||||||||||||    
T  16175828 gaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttag 16175735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 42192665 - 42192628
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  42192665 tttccaactccagaaacgcacagaaatgacagttttag 42192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 558
Target Start/End: Complemental strand, 43216261 - 43216095
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc-cttttacaacagaacaaaatggtccttcaattatca 489  Q
    |||| ||||||||||||||||||| |||| | | ||||  | |||||||||| ||||||| || |||||| ||  ||||||||| |||| | || ||| |    
T  43216261 atttcaggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctctttta-aatcgaacaaaatcgtccctaaactat-a 43216164  T
Q  490 tttttgttgcatttttcgtcctacctc-ctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    | ||| ||||| |||| |||||| ||| ||| |||| ||||||||||| ||| |||||||||| ||||||    
T  43216163 tattttttgcagttttagtcctatctctcta-tttccaactccagaaatgcacagaaatgacaattttag 43216095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 558
Target Start/End: Original strand, 43160103 - 43160170
Alignment:
Q  491 ttttgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||| |||| |||||| |||| ||||||||| ||||||||||||| | |||||||||||||||    
T  43160103 tttttttgcagttttagtcctatctccctattttcaa-ctccagaaacgcacataaatgacagttttag 43160170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 3e-80; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 13225185 - 13224998
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 13224998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 388 - 583
Target Start/End: Original strand, 19176281 - 19176476
Alignment:
Q  388 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattat 487  Q
    ||||| ||||||||||||||||||||  |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  19176281 taaatattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattat 19176380  T
Q  488 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  19176381 catttttgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccatatgct 19176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 400 - 583
Target Start/End: Original strand, 9928912 - 9929095
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctacccttatgct 9929095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 11657003 - 11656816
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || || |||||||||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattgtagacctacccctatgct 11656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 397 - 583
Target Start/End: Complemental strand, 41681679 - 41681493
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| ||| |||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacccctatgct 41681493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 400 - 583
Target Start/End: Complemental strand, 12572393 - 12572210
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| |||||||||||||||||||| ||| ||| |||||| |||||||||||| ||||||||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttaggcggttttagatctacccctatgct 12572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 396 - 583
Target Start/End: Original strand, 44831246 - 44831433
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  ||||| || ||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 44831433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 393 - 583
Target Start/End: Original strand, 33742918 - 33743107
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||||||||||  |||||||| ||||  |||||||||||||||||| |||||||||| |||||||||||  |||| ||||||||||||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaac-ggtctttcaattatcattt 33743016  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  33743017 ttgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 33743107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 398 - 583
Target Start/End: Complemental strand, 31133764 - 31133579
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  498 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||| | |||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggttttatgcggttttagacctatctctatgct 31133579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 399 - 583
Target Start/End: Complemental strand, 33328683 - 33328499
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||| ||||||  |||||||| ||| | |||||||||||||| ||| ||| |||||| |||| ||||||| |||||||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaaacctacccctatgct 33328499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 392 - 556
Target Start/End: Complemental strand, 34541098 - 34540934
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  34541098 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatt 34540999  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 556  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  34540998 tttgttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 395 - 557
Target Start/End: Original strand, 41681132 - 41681292
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  41681232 gttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 395 - 552
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    ||||||||||| |||||||||| |||||| |||||  || ||||||||||||||||||||||||| || ||||||||| |||| ||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacag 552  Q
     |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 393 - 558
Target Start/End: Complemental strand, 19176839 - 19176675
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||||||||||  |||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  19176839 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 19176740  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||| || ||||| |  ||||| ||||||||| |||||||||||||||    
T  19176739 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagacaaatgacagttttag 19176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 9930203 - 9930042
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||  ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| || ||||||||||||| ||||||||    
T  9930103 ttgcatttttcgtcctaccccccatttt-attctccaaaagcgcagagaaatgatagttttag 9930042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 393 - 558
Target Start/End: Original strand, 12571859 - 12572024
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||||||||||  |||||||| ||||| ||||||||||||||||| || |||||||| |||||||||||| |||| ||||||||||||||    
T  12571859 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcattt 12571958  T
Q  493 ttgttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || || ||||| |  ||||| |||||||||||||||||||||||||    
T  12571959 ttgttgcatttttcgtcctaaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 12572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 391 - 558
Target Start/End: Original strand, 11656449 - 11656616
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| ||| |||||||| ||||||||||||| |||    
T  11656449 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccat 11656548  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactcc-agaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||||| || ||||| |  |||| | ||||||||||||||| |||||||||    
T  11656549 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatggcagttttag 11656616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 31133218 - 31133380
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||  ||||||||||||||||||| ||||||||| |||| |||||||  ||||||||| ||||||||||    
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  31133318 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 31133380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 400 - 558
Target Start/End: Original strand, 33328161 - 33328318
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||| || |||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||  | ||||| |  ||||| ||||||| |||||||||||||||||    
T  33328261 atttttcgtcctaccctcgatttt-attctccaaaaacgcaaagaaatgacagttttag 33328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 394 - 558
Target Start/End: Complemental strand, 44831793 - 44831630
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||| ||||||||  |||||||| |||||  ||||||||||||||||||||| |||||| |||||||||||| |||  |||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttt 44831694  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||| |||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  44831693 tgttgcatttttggtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 44831630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 401 - 558
Target Start/End: Original strand, 13224645 - 13224800
Alignment:
Q  401 taattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgca 500  Q
    |||||||||||||  || ||||| ||||| |||||||||||||||||| |||||||||| ||||||||||||   ||||||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  501 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 13224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 391 - 558
Target Start/End: Complemental strand, 9178186 - 9178021
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    ||||| |||||||||||||||||  |||||||| ||||| ||||||||||||||| || |||||| ||| |||||||||||| |||||||||| ||||||    
T  9178186 atttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcat 9178087  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || |||| || ||||| |  ||| | |||||||||||||||||| ||||||    
T  9178086 ttttgttgcatttttcatcttacc-cccatttt-attctcaaaaaacgcagagaaatgacaattttag 9178021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 9177724 - 9177818
Alignment:
Q  489 atttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacccctatgct 9177818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 395 - 505
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  || ||||| |||||  ||||||||||| |||||| ||||||||| ||||||| |||| |||| ||||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  495 gttgcattttt 505  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 444 - 558
Target Start/End: Complemental strand, 33743417 - 33743304
Alignment:
Q  444 tggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagag 543  Q
    |||| ||||| ||||| |||||||||||| |||  |||||||||||||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagag 33743319  T
Q  544 aaatgacagttttag 558  Q
    |||| ||||||||||    
T  33743318 aaataacagttttag 33743304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 390 - 523
Target Start/End: Original strand, 10918119 - 10918252
Alignment:
Q  390 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatca 489  Q
    ||||||||| ||||||||| ||||  |||||||| |||| ||||||||||||| ||||| ||||   ||| |||||| |||||| ||||||||| |||||    
T  10918119 aattttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatca 10918218  T
Q  490 tttttgttgcatttttcgtcctacctcctatttt 523  Q
    ||||||||||||||||| || |||| || |||||    
T  10918219 tttttgttgcatttttcatcataccccccatttt 10918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 400 - 558
Target Start/End: Complemental strand, 4630328 - 4630177
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    |||||||||||||| ||| ||||| ||||| |||||||||||| |||||||||  ||||| ||||||| | || |||||||||||||      |||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||| ||||||| || ||||| |  ||||| ||||||||| |||||||||||||||    
T  4630234 atttttcatcctaccccccatttt-attctccaaaaacgcagaaaaatgacagttttag 4630177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 509
Target Start/End: Complemental strand, 8074097 - 8073985
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||| ||| ||||||  |||||||| ||||| ||| |||||||| || || || ||||||| |||||||||||||  |||||||||||||| |||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttg 8073999  T
Q  496 ttgcatttttcgtc 509  Q
    ||||||||| ||||    
T  8073998 ttgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 523
Target Start/End: Original strand, 43958264 - 43958311
Alignment:
Q  476 tccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 523  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctatttt 43958311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 558
Target Start/End: Complemental strand, 35427369 - 35427198
Alignment:
Q  386 attaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc-cttttacaacagaacaaaatggtccttcaat 484  Q
    ||||||| ||||||||||||||||||||  ||||||   ||||  | |||||||||| |||| || || |||||| ||| ||||||||| |||| | |||    
T  35427369 attaaatattaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctctttta-aaccgaacaaaatcgtccctaaat 35427271  T
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||| || ||| ||||| |||| |||| | ||||   |||| ||||||| ||||||| |||||||||||||||||    
T  35427270 tat-atattttttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttag 35427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 502 - 558
Target Start/End: Original strand, 18805267 - 18805322
Alignment:
Q  502 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| |||||||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  18805267 ttttagtcctacctcctatcttcaa-ctccagaaacacagagaaatgacagttttag 18805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 557
Target Start/End: Original strand, 18049658 - 18049750
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    ||||||||| |||||| || |||   |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  18049658 gaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 18049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 28254874 - 28254812
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  28254874 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28254812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 28254493 - 28254586
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || |||   |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||| ||||||    
T  28254493 gaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttag 28254586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 3e-80; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 392 - 583
Target Start/End: Complemental strand, 37727480 - 37727289
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    |||| |||||||||||||||||  ||||| || ||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  37727480 tttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatt 37727381  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37727380 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 37727289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 396 - 576
Target Start/End: Original strand, 39555577 - 39555757
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctaccc 576  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 396 - 583
Target Start/End: Original strand, 31778652 - 31778839
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccgtatgct 31778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 391 - 583
Target Start/End: Complemental strand, 43973991 - 43973799
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||    
T  43973991 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcat 43973892  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  43973891 ttttgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 43973799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 393 - 583
Target Start/End: Complemental strand, 29801965 - 29801775
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    ||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  29801965 tttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattt 29801866  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||| |||||||    
T  29801865 ttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacctctatgct 29801775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 394 - 583
Target Start/End: Complemental strand, 5137529 - 5137340
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccccatgct 5137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 395 - 583
Target Start/End: Complemental strand, 4275911 - 4275723
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||| |||||| |||||||||||| ||||||| |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 4275723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 394 - 583
Target Start/End: Original strand, 17464488 - 17464677
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  |||||||| ||||| ||| || ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacccctatgct 17464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 391 - 583
Target Start/End: Original strand, 22424808 - 22425000
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    |||||||||||||||||||||||  | |||||| ||  | ||||| ||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||    
T  22424808 attttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcat 22424907  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  22424908 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 22425000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 20841107 - 20840920
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  | |||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |  ||||||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagatatacccctatgct 20840920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 396 - 583
Target Start/End: Original strand, 27393660 - 27393847
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||  |||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 27393847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 397 - 583
Target Start/End: Original strand, 25853234 - 25853420
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||| ||||| |||||||||| || ||||||||| |||||||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagacctatccctatgct 25853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 30098309 - 30098138
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||   ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggtttta 567  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttaggcggtttta 30098138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 400 - 583
Target Start/End: Original strand, 32534962 - 32535145
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| |||||  ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| |||| ||||||||||    
T  32535062 atttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttaggcggttttataccttcccctatgct 32535145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 392 - 583
Target Start/End: Complemental strand, 23645015 - 23644823
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    |||| |||||||||| ||||||  |||||||| ||||| |||||||||||| ||||||| |||||||| |||||||||||| |||| |||||||||||||    
T  23645015 ttttcggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatt 23644916  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacct-acccctatgct 583  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  23644915 tttgttgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttagacctaacccctatgct 23644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 395 - 575
Target Start/End: Original strand, 26837358 - 26837538
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||| ||||  |||| ||  ||||| |||||||||||| |||||||||||||||| |||| ||| ||| |||||||||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacc 575  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 400 - 583
Target Start/End: Original strand, 26274570 - 26274753
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||| |||| ||||| ||  ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||| |||||| ||||||  |||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctacgtctatgct 26274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 418 - 583
Target Start/End: Original strand, 24300577 - 24300742
Alignment:
Q  418 ctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcc 517  Q
    |||||| |||||  || ||||||||||||||||| ||||||| ||||||| |||| ||| ||||||||||||||||||||||| ||||||||| ||||||    
T  24300577 ctcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgcaattttcgtcccacctcc 24300676  T
Q  518 tattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  24300677 tattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 24300742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 425 - 581
Target Start/End: Complemental strand, 41047215 - 41047060
Alignment:
Q  425 tttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttc 524  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41047215 tttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgcatttttcgtcctacctcctattttc 41047117  T
Q  525 aaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 581  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||    
T  41047116 aaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccatatg 41047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 39556122 - 39555962
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 39555962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 31779199 - 31779037
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| ||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  31779099 gttgcatttttcgtcccaccccccatttt-attctccaaaaacgcagagaaatgtcagttttag 31779037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 394 - 558
Target Start/End: Original strand, 20840557 - 20840720
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttt 20840656  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||| || ||||| |  ||||  |||||||||||||||||||||||||    
T  20840657 tgttgcatttttcgtcctaccccccatttt-attctccttaaacgcagagaaatgacagttttag 20840720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 399 - 558
Target Start/End: Complemental strand, 25853770 - 25853612
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||||| || | ||||| ||||||||||||||||||||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  25853670 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 25853612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 37726928 - 37727089
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| |||||||| || ||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  37727028 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 37727089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 5136978 - 5137140
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||| ||||||||||||||  |||||||| ||||| | |||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5137140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 394 - 553
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    |||||||| |||||||||||  || ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagt 553  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||    
T  48453086 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 24301106 - 24300941
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||||||| |||||||||| ||||| |||| ||||||| |||||||| | |||||||    
T  24301106 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatt 24301007  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  24301006 tttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 24300941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 400 - 558
Target Start/End: Original strand, 41046703 - 41046860
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||| ||| | |||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 41046860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 32535513 - 32535344
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatc--- 488  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||       
T  32535513 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 32535414  T
Q  489 --atttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
      |||||||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  32535413 aaatttttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgatagttttag 32535344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 23644461 - 23644622
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||  ||||| |||||||||||| |||||||||| ||||| ||||||||||||  |||||||||||||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||| | ||||||||    
T  23644561 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 23644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 27394123 - 27393962
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||  ||||||||| ||||| |||||||||||| | ||||||||||||||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| | ||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  27394023 ttgcattttccatcctacccccaatttt-attctccaaaaacgcagagaaataacagttttag 27393962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 392 - 558
Target Start/End: Original strand, 30104477 - 30104641
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||||||||  |||||||| ||||  |||||||||||| |||||||||||||||| |||| || | || ||||||||||||||||||    
T  30104477 ttttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatt 30104576  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||||| || ||||| |   || | |||||||||||||||||||||||||    
T  30104577 tttgttgcatttttcgtcctacc-cccatttt-attatctaaaaacgcagagaaatgacagttttag 30104641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 558
Target Start/End: Original strand, 43973441 - 43973601
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||  |||||||||||| || |  |||||||||| |||||||||||| |||||||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||| |||| ||||||||||    
T  43973541 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagataaataacagttttag 43973601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 26837905 - 26837741
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||| |||||| |||| || ||||||||| |||| ||||| |||||||    
T  26837905 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc-tttaaaatagaacaaaacggtcattcaagtatcatt 26837807  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  26837806 tttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 26837741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 401 - 547
Target Start/End: Complemental strand, 22425354 - 22425209
Alignment:
Q  401 taattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgca 500  Q
    |||||||||||||  |||||||| || || ||||||||||| |||||| ||||||| || |||||||||||| ||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  501 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 547  Q
    |||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 22425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 514
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  || ||||| |||||  ||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  497 tgcatttttcgtcctacc 514  Q
    ||||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 23228552 - 23228427
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  ||| |||| ||||| |||||||||||| || || |||||||||| ||| ||||||||| |||||||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  497 tgcatttttcgtcctacctcctatttt 523  Q
    ||||||||||||||||||||| |||||    
T  23228453 tgcatttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 398 - 511
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||||||||  |||||||| ||||||||| |||||||| |||||||||||||||| ||||||||||||| |||||||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  498 gcatttttcgtcct 511  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 17465038 - 17464876
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||| ||||  |||||||| ||||| |||| || ||||||||||   |||||||| || ||||||||| ||||||||||||||||||||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  496 ttgcat-ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| |||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  17464938 ttgcatttttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 17464876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 523
Target Start/End: Complemental strand, 25612519 - 25612396
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||  |||||||||||| |||||||||||||||| || |||||||||  ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  500 atttttcgtcctacctcctatttt 523  Q
    ||||||||||||||| || |||||    
T  25612419 atttttcgtcctaccccccatttt 25612396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 431 - 558
Target Start/End: Complemental strand, 26275077 - 26274952
Alignment:
Q  431 ctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactc 530  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||||| |||||||||||||||||||| |||||||||||||| || ||||| |  |||    
T  26275077 ctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt-attctc 26274980  T
Q  531 cagaaacgcagagaaatgacagttttag 558  Q
    || || ||||||||||||||||||||||    
T  26274979 caaaaccgcagagaaatgacagttttag 26274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 523
Target Start/End: Complemental strand, 51474884 - 51474753
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||||||||  | | |||| |||||  ||||||||||| ||||| |||||||||| |||| |||||||| |||||| | ||||||||    
T  51474884 ttttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatt 51474785  T
Q  492 tttgttgcatttttcgtcctacctcctatttt 523  Q
    ||||||||||||||||||||||| || |||||    
T  51474784 tttgttgcatttttcgtcctacccccaatttt 51474753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 50116954 - 50116828
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    ||||||||||||||||| ||||||||| ||||   ||||||||||| ||||| |||||||||  || ||||||||| |||| |||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  497 tgcatttttcgtcctacctcctatttt 523  Q
    |||| ||||||||||||| || |||||    
T  50116854 tgcaattttcgtcctaccccccatttt 50116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 398 - 514
Target Start/End: Complemental strand, 32697244 - 32697128
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||| | ||||  |||||||| ||| | |||||||||||| | |||  ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  498 gcatttttcgtcctacc 514  Q
    |||||||||||||||||    
T  32697144 gcatttttcgtcctacc 32697128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 511
Target Start/End: Complemental strand, 18010272 - 18010176
Alignment:
Q  415 atcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcct 511  Q
    |||||| || ||| |||||||||||||| |||| | ||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  18010272 atcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 523
Target Start/End: Complemental strand, 25420684 - 25420560
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    ||||||||||||||| ||| ||||  ||||  |||||||||||| || ||  ||||||||| || |||| ||||| ||||||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  499 catttttcgtcctacctcctatttt 523  Q
    ||||||||||| |||| || |||||    
T  25420584 catttttcgtcataccccccatttt 25420560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 514
Target Start/End: Original strand, 37220555 - 37220674
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||  ||||| |||||||| | |  | || ||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  495 gttgcatttttcgtcctacc 514  Q
    |||||| |||||||||||||    
T  37220655 gttgcacttttcgtcctacc 37220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 508
Target Start/End: Original strand, 45965936 - 45966049
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| |||||  ||||||||||  |  |||||| |||||| |||| |||||||  ||||||| |||||||||| |    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  495 gttgcatttttcgt 508  Q
    ||||||||||||||    
T  45966036 gttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 502 - 558
Target Start/End: Original strand, 55192222 - 55192277
Alignment:
Q  502 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaa-ctccagaaacgcagagaaatgacagttttag 55192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 577
Target Start/End: Original strand, 8873784 - 8873869
Alignment:
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccc 577  Q
    |||| ||||| |||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||||  ||||  |||||||||    
T  8873784 tttttttgcagttttagtcttacctcctattttcaa-cttcagaaacgcagagaaatgacagttttaggcaattttggacctacccc 8873869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 485 - 558
Target Start/End: Complemental strand, 27200150 - 27200078
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| ||| ||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  27200150 tatcatgttttttgcagttttagtcatacctcctattttcaa-ctccagaaacgcagagaaatgacaggtttag 27200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 37222118 - 37222041
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaa 472  Q
    |||||||||||||||||||  |||||||| ||||  |||||||| ||| |||||||||| ||||| ||||||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaa 37222041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 485 - 573
Target Start/End: Original strand, 2323466 - 2323553
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaaccta 573  Q
    |||||| ||| ||||| |||| |||||||||||||||||| |||||||||||| | || |||||||||||||||||  ||||| |||||    
T  2323466 tatcatgttttttgcaattttagtcctacctcctattttc-aactccagaaacacggataaatgacagttttaggcaattttagaccta 2323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 558
Target Start/End: Original strand, 37075781 - 37075848
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| |||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaa-ctccagaaacgcagagaaatgaccgttttag 37075848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 50900637 - 50900710
Alignment:
Q  502 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctaccc 576  Q
    |||| ||||||||| |||||||||| ||| ||||||  ||||||||||||||||||||| |||||| ||||||||    
T  50900637 ttttagtcctaccttctattttcaa-ctctagaaacatagagaaatgacagttttaggcagttttagacctaccc 50900710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 558
Target Start/End: Original strand, 55389641 - 55389765
Alignment:
Q  433 actcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcca 532  Q
    |||||||||| ||||||| || ||||  ||  ||||||||| |||||| || ||| || ||| ||||| |||| |||||| ||||   |||| |||||||    
T  55389641 actcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactcca 55389739  T
Q  533 gaaacgcagagaaatgacagttttag 558  Q
    |||||||| |||||||||||||||||    
T  55389740 gaaacgcacagaaatgacagttttag 55389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 583
Target Start/End: Complemental strand, 37076133 - 37076034
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaaccta-cccctatgct 583  Q
    |||||| ||| || ||||||| ||| ||||| |||||||  ||||| ||||||| ||||||||| ||||||||||| |||||| || || ||||||||||    
T  37076133 tatcatgttttttacatttttagtcttaccttctattttttaactctagaaacgtagagaaatggcagttttaggcagttttagacttatcccctatgct 37076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 511
Target Start/End: Original strand, 23227320 - 23227370
Alignment:
Q  461 aacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcct 511  Q
    ||||||||||| | ||||| ||||| |||||||||||||||||||||||||    
T  23227320 aacagaacaaatttgtcctccaattttcatttttgttgcatttttcgtcct 23227370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 50662890 - 50662798
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| |||||| |||| ||||||||| ||||||||||||| |||||||||||||||||    
T  50662890 gaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctagctccctattttcaa-ctccagaaacgcacagaaatgacagttttag 50662798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 494
Target Start/End: Original strand, 25419133 - 25419242
Alignment:
Q  386 attaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtcc-ttcaat 484  Q
    |||| |||||| |||| |||| ||||||  || ||||| ||| |  ||||||||||| | || ||||||||||| ||||||||||||  |||| ||||||    
T  25419133 attagattttaagcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaat 25419232  T
Q  485 tatcattttt 494  Q
    ||||||||||    
T  25419233 tatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 32730812 - 32730775
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| |||||||||||||||||    
T  32730812 tttcaaactccagaaacgcacagaaatgacagttttag 32730775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 485 - 558
Target Start/End: Complemental strand, 36701554 - 36701482
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| ||| ||||| |||| ||| |||||||||||||| |||||||||||| || ||||||| |||||||||    
T  36701554 tatcatgttttttgcagttttagtcatacctcctattttc-aactccagaaacacatagaaatggcagttttag 36701482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 51828436 - 51828343
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || |||   |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  51828436 gaacaaaattgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttag 51828343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 558
Target Start/End: Complemental strand, 8874138 - 8874072
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| || |||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  8874138 ttttttttgcagttttagttctaccttctattttcaa-ctccagaaacgca-agaaatgacagttttag 8874072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 558
Target Start/End: Original strand, 40275187 - 40275255
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  40275187 ttttttttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttag 40275255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 558
Target Start/End: Original strand, 49407900 - 49407955
Alignment:
Q  502 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||| |||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  49407900 ttttagtcatacctcctattttcaa-ctccaaaaacgcagagaaatgacaattttag 49407955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 49720369 - 49720531
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc-cttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||| ||||| |   ||||  | |||||||||| ||||||| || |||||| | | ||||||||| |||| | || |||   |||    
T  49720369 taggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccctaaagtatacgttt 49720467  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    | ||||| |||| |||||| |||||  |||| ||||||||||||||| | |||||||||||||||    
T  49720468 t-ttgcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttag 49720531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 51827956 - 51828117
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcct-gcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    ||||||||||||||||||  |||| |   ||||  | |||||||||| ||||||| || |||||| | | ||||||||| |||| | || ||| || |||    
T  51827956 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgttt 51828053  T
Q  495 gttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
     |||||||||| |||||| |||| ||||||||| ||||||||||||| | |||||||||||||||    
T  51828054 tttgcatttttagtcctatctccctattttcaa-ctccagaaacgcacataaatgacagttttag 51828117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 558
Target Start/End: Complemental strand, 43222842 - 43222775
Alignment:
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||| |||| |||| ||| ||||||||  ||||||||||||||| | |||||||||||||||    
T  43222842 tttttttgcagttttagtcccaccccctatttttcaactccagaaacgcacaaaaatgacagttttag 43222775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 558
Target Start/End: Original strand, 47431790 - 47431857
Alignment:
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  47431790 tttttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 47431857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 14654639 - 14654577
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| |||||  |||| ||||||||||||||| | |||||||||||||||    
T  14654639 ttgcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttag 14654577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 558
Target Start/End: Original strand, 22370599 - 22370757
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  ||||||   ||||  | |||||||||| ||||||| || ||||  |||  |||||||| |||| | || |||   |||| ||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    | |||| |||||| |||||  | || ||||||||||||||| |||||| ||||||||||    
T  22370699 agttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttag 22370757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 37847267 - 37847206
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||||||||||| || |||||| |||||||||||||| ||||||    
T  37847267 ttgcagttttagtcctatctcctattttcaa-cttcagaaatgcagagaaatgacaattttag 37847206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 40839100 - 40839038
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  40839100 ttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 40839038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Original strand, 43222488 - 43222550
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||  ||||||| ||||||||  ||||||||||||| | | |||||||||||||||    
T  43222488 ttgcatttttaatcctaccccctatttttcaactccagaaacgtacaaaaatgacagttttag 43222550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 44676950 - 44676858
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctc-ctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| |||||| ||| |||||||||| ||||||||||||| | |||||||||||||||    
T  44676950 gaacaaaatcgtccttaaactat-atgttttttgcaattttagtcctatctctctattttcaa-ctccagaaacgcacataaatgacagttttag 44676858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 50900975 - 50900914
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||||||||||||||| ||||||| ||||||| ||||||  |||||||||    
T  50900975 ttgcagtttttgtcctacctcctattttc-aactccataaacgcaaagaaattgcagttttag 50900914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 52236935 - 52236976
Alignment:
Q  516 cctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  52236935 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 52236976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 558
Target Start/End: Complemental strand, 52237327 - 52237203
Alignment:
Q  433 actcacgaaactggtcctgcc-cttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcc 531  Q
    |||||||||| ||||||| || |||||| | | ||||||||| |||| | |||||| || ||| ||||| |||| |||||| ||||   |||| ||||||    
T  52237327 actcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccctaaattat-atgttttttgcagttttagtcctatctccctatttctaactcc 52237230  T
Q  532 agaaacgcagagaaatgacagttttag 558  Q
     |||||||| |||||||||||||||||    
T  52237229 ggaaacgcacagaaatgacagttttag 52237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 558
Target Start/End: Original strand, 36701224 - 36701268
Alignment:
Q  513 cctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||    
T  36701224 cctcctattttcaa-ctccagaaacgcagataaatgacaattttag 36701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 40838775 - 40838812
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  40838775 tttccaactccagaaacgcacagaaatgacagttttag 40838812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 46013901 - 46013808
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || |||   |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| | |||||||||||||||    
T  46013901 gaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttag 46013808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 52375450 - 52375487
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  52375450 tttctaactccagaaacgcatagaaatgacagttttag 52375487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 52375754 - 52375717
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  52375754 tttccaactccagaaacgcacagaaatgacagttttag 52375717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 511
Target Start/End: Original strand, 32695761 - 32695817
Alignment:
Q  455 ttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcct 511  Q
    ||||| ||||||||||||| ||||| | ||||| |||||||||||| |||| |||||    
T  32695761 ttttaaaacagaacaaaattgtcctacgattattatttttgttgcaattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 558
Target Start/End: Complemental strand, 34105102 - 34105034
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| |||| | |||||  |||| |||| |||||||||| |||||||||||||||||    
T  34105102 ttttttttgcagttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttag 34105034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 558
Target Start/End: Complemental strand, 49408233 - 49408169
Alignment:
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||| |||| ||||||||||  |||||||| ||||||||||||| ||||||| |||||||||    
T  49408233 tttttttgcagttttagtcctacctc--attttcaa-ctccagaaacgcaaagaaatggcagttttag 49408169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 558
Target Start/End: Complemental strand, 55390039 - 55389983
Alignment:
Q  502 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| |||||||||||   |||| ||||||| ||||||| |||||||||||||||||    
T  55390039 ttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttag 55389983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 1e-79; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 393 - 583
Target Start/End: Original strand, 21856038 - 21856228
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    ||||| |||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21856038 tttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 21856137  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21856138 ttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 21856228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 39154566 - 39154379
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 39154379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 395 - 583
Target Start/End: Complemental strand, 15173640 - 15173453
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 395 - 583
Target Start/End: Original strand, 50970276 - 50970464
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacccctatgct 50970464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 390 - 584
Target Start/End: Original strand, 15646185 - 15646379
Alignment:
Q  390 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatca 489  Q
    |||| |||||||||||| ||||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  15646185 aattctaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatca 15646284  T
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgcta 584  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  15646285 tttttgttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacccctatgcta 15646379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 399 - 583
Target Start/End: Complemental strand, 17433758 - 17433574
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| | ||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacccctatgct 17433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 392 - 583
Target Start/End: Complemental strand, 29870169 - 29869978
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  29870169 tttttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatt 29870070  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  29870069 tttgttgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 405 - 583
Target Start/End: Original strand, 33143925 - 33144103
Alignment:
Q  405 tacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttt 504  Q
    |||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  505 tcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 33144103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 398 - 583
Target Start/End: Original strand, 5539817 - 5540002
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  498 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    | ||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacccctatgct 5540002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 398 - 583
Target Start/End: Original strand, 8678542 - 8678727
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  498 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttaggcggttttagacatacccctatgct 8678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 396 - 583
Target Start/End: Complemental strand, 18984665 - 18984478
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||| ||| ||||| |||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  18984565 ttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttaggcggttttagaccttcccctatgct 18984478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 398 - 583
Target Start/End: Complemental strand, 4636515 - 4636330
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  498 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacccctatgct 4636330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 29307487 - 29307326
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    ||||||||| |||||||  |||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 29307326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 398 - 581
Target Start/End: Original strand, 5962579 - 5962762
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    ||||||||||| ||||  |||||||| | ||||||| ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  498 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 581  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttaggcggttttaaacttacccctatg 5962762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 391 - 567
Target Start/End: Original strand, 26859053 - 26859229
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    ||||| |||||||||||||||||  |||| ||| ||||| ||||| ||||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  26859053 atttttggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcat 26859152  T
Q  491 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggtttta 567  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | | |||||||||||||||||    
T  26859153 ttttgttgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttaggcggtttta 26859229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 387 - 558
Target Start/End: Complemental strand, 9019518 - 9019347
Alignment:
Q  387 ttaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaatta 486  Q
    ||||| |||||||||||||||||||||  |||||||| ||||  |||||||| |||||||| ||||| ||||| |||||||||||| |||| ||||||||    
T  9019518 ttaaagtttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaatta 9019419  T
Q  487 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  9019418 tcatttttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttag 9019347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 18984117 - 18984279
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  18984217 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgatagttttag 18984279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 397 - 583
Target Start/End: Original strand, 17112282 - 17112467
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  | ||| || |||| |||||||| |||| ||||   ||||||||| || |||| ||||| |||||||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttaggcggttttagacctacccctatgct 17112467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 50970824 - 50970663
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  50970724 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 50970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 397 - 558
Target Start/End: Original strand, 29306953 - 29307113
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||||||| || ||||||| |||||||||||| |||||||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 29307113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 399 - 558
Target Start/End: Complemental strand, 33144462 - 33144304
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  33144362 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 33144304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 5540364 - 5540203
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5540203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 15646741 - 15646580
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||| |||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacccccaatttt-attctccaaaaacgcagagaaatgacagttttag 15646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 8679086 - 8678927
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||| ||||| |  ||||| ||| |||||||||||||||||||||    
T  8678986 tgcatttttcgtcctacctcc-atttt-attctccaaaaatgcagagaaatgacagttttag 8678927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 29869619 - 29869780
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| |||||  ||||||||||||||||| |||||||||| |||||||||||| |||||||||||||| |||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||  || ||||| |  ||||| |||||||||||||||||||||||||    
T  29869719 ttgcatttttcgtcctacaccccatttt-attctccaaaaacgcagagaaatgacagttttag 29869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 26859606 - 26859445
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||  ||||||||||||| |||||||||| | |||||||||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||  |  ||||| |||||||||||||| | ||||||||    
T  26859506 gttgcatttttcgtcctaccccccattt--attctccaaaaacgcagagaaataatagttttag 26859445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 400 - 558
Target Start/End: Original strand, 15173099 - 15173256
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||| |||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 15173256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 388 - 547
Target Start/End: Original strand, 9018964 - 9019122
Alignment:
Q  388 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattat 487  Q
    |||| |||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||| ||||||||||| |||||||||||| |||| ||||| |||    
T  9018964 taaactttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactat 9019063  T
Q  488 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 547  Q
    ||||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  9019064 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 9019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 400 - 558
Target Start/End: Complemental strand, 5963120 - 5962963
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||| || |||||||||| || |||||||||  ||| |||||||||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  5963020 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5962963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 21856588 - 21856428
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| ||||||| ||||||| ||||||| ||||| |||||||||||| |||||||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||  || ||||| |  ||||| |||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttag 21856428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 558
Target Start/End: Original strand, 17433216 - 17433376
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  ||||| || ||||| ||||||| |||||||  | |||||||||| |||||||||||| |||||||||| ||||||||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||| ||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  17433316 tgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 17433376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 399 - 558
Target Start/End: Original strand, 39154021 - 39154179
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  || || || |||||  |||||||||||||| || |||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || ||| | |  ||||| ||||||| |||||||||||||||||    
T  39154121 catttttcgtcctaccccccattct-attctccaaaaacgcatagaaatgacagttttag 39154179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 523
Target Start/End: Original strand, 52268289 - 52268416
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||  ||||| || ||||||||| |||||||||||||||| ||||||||||||  ||| |||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  496 ttgcatttttcgtcctacctcctatttt 523  Q
    ||||| ||||||||||||| || |||||    
T  52268389 ttgcacttttcgtcctaccccccatttt 52268416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 483
Target Start/End: Complemental strand, 2733511 - 2733416
Alignment:
Q  388 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaa 483  Q
    ||||||||||||||||||| ||||||  |||| ||| ||||| ||| || ||||| |||||||||||||||| |||||||||||| ||||||||||    
T  2733511 taaattttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 387 - 497
Target Start/End: Complemental strand, 47827141 - 47827033
Alignment:
Q  387 ttaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaatta 486  Q
    ||||||||| |||||||| |||||||| |||  | || ||||| |||||||||||| ||||| |||||||||| ||||||||||||| |||||| |||||    
T  47827141 ttaaatttt-ggcttaat-acacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaatta 47827044  T
Q  487 tcatttttgtt 497  Q
    |||||||||||    
T  47827043 tcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 513
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| ||||   |||||| ||||  ||| ||||||||||| ||||||||||||  ||| |||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  499 catttttcgtcctac 513  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 392 - 558
Target Start/End: Complemental strand, 44802722 - 44802557
Alignment:
Q  392 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatt 491  Q
    ||||||||||||||||||||||  |||| |   ||||  |  ||||||||| ||||| ||||  |||  ||| ||||||||| |||| | || ||||||     
T  44802722 ttttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatg 44802623  T
Q  492 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||| ||||| |||| || ||||||||||||||| |||||||||||| |||| |||||||| ||||||    
T  44802622 ttttttgcagttttagttctacctcctattttc-aactccagaaacacagaaaaatgacaattttag 44802557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 461 - 558
Target Start/End: Original strand, 4636037 - 4636132
Alignment:
Q  461 aacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||  |||||||||| ||||||||||||||||||||| || ||||| || ||||| |  || || |||||||||||||||||||||||||    
T  4636037 aacagaacaaac-ggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt-attcttcaaaaacgcagagaaatgacagttttag 4636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 472
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaa 472  Q
    |||||||||||||||  |||||||| |||||||||||||||||| ||||| |||||||||| || | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 17088587 - 17088526
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| || |||||||||||||||||| || |||||||||||||||||||||||||||    
T  17088587 ttgcagttttagttctacctcctattttcaaa-tctagaaacgcagagaaatgacagttttag 17088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 45048594 - 45048533
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 547  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  45048594 tatcatgttttttgcagttttagtcctacctcctattttc-aactccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 558
Target Start/End: Original strand, 17088243 - 17088310
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| |||||||||||||||||| |||| |||||| ||||||||||| |||||||||    
T  17088243 ttttttttgcaattttagtcctacctcctattttc-aacttcagaaatgcagagaaatggcagttttag 17088310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 496 - 558
Target Start/End: Original strand, 45048253 - 45048314
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||||||| ||||||||| ||||||||||||| |||||| ||||||||||    
T  45048253 ttgcagttttagtcctacctcatattttcaa-ctccagaaacgcatagaaataacagttttag 45048314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 9833630 - 9833538
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||| | || ||| || ||| ||||| |||| |||||||| ||||||||| ||||||||||||||| |||||| ||| ||||||    
T  9833630 gaacaaaatcgtccctaaaatattatgttttttgcagttttagtcctaccccctattttc-aactccagaaacgcacagaaataacatttttag 9833538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 9992223 - 9992315
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || ||| || ||| ||||| |||| |||||| ||||   |||| |||||||||||| || |||||||||||||||||    
T  9992223 gaacaaaatggtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 9992315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 558
Target Start/End: Original strand, 8229732 - 8229800
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  8229732 ttttttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 8229800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 558
Target Start/End: Complemental strand, 17641818 - 17641750
Alignment:
Q  490 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  17641818 ttttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 17641750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Original strand, 39485163 - 39485224
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||||||||||| || ||||||| |||||| |||||||||||||    
T  39485163 ttgcagttttagtcctatctcctattttcaa-cttcagaaacacagagagatgacagttttag 39485224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 44954674 - 44954612
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||||||||||    
T  44954674 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 44954612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 8230064 - 8230027
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  8230064 tttccaactccagaaacgcacagaaatgacagttttag 8230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 558
Target Start/End: Complemental strand, 16299160 - 16299068
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| |||||| ||||   |||| ||||||||||||||| |||||||||| ||||||    
T  16299160 gaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttag 16299068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 34555803 - 34555766
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  34555803 tttccaactccagaaacgcacagaaatgacagttttag 34555766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 554
Target Start/End: Complemental strand, 44291769 - 44291701
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 554  Q
    |||||| ||| ||||| |||| |||||||| ||||||||| |||||||||||| || ||||||| |||||    
T  44291769 tatcatgttttttgcagttttagtcctaccccctattttc-aactccagaaacacatagaaatggcagtt 44291701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 44954349 - 44954386
Alignment:
Q  521 tttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  44954349 tttccaactccagaaacgcacagaaatgacagttttag 44954386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 556
Target Start/End: Complemental strand, 29021311 - 29021252
Alignment:
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 556  Q
    ||||| |||| ||| |||| ||||||||||| ||||||||||||| | |||||||||||||    
T  29021311 ttgcagttttagtcttaccccctattttcaa-ctccagaaacgcacataaatgacagtttt 29021252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 148; Significance: 8e-78; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 394 - 581
Target Start/End: Complemental strand, 2215 - 2028
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2116  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatg 581  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  2115 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatg 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 1665 - 1827
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  ||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 132; Significance: 3e-68; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 397 - 576
Target Start/End: Complemental strand, 11168 - 10989
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctaccc 576  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctaccc 10989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 416 - 558
Target Start/End: Original strand, 10640 - 10781
Alignment:
Q  416 tcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacct 515  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||     
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  516 cctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
     | ||||| |  ||||| ||| |||||||||||||||||||||    
T  10740 tccatttt-attctccaaaaatgcagagaaatgacagttttag 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 1286 - 1125
Alignment:
Q  397 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgt 496  Q
    |||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  497 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttag 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 399 - 558
Target Start/End: Original strand, 755 - 912
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  || ||||| ||||| |||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  854 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 120; Significance: 4e-61; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 432 - 583
Target Start/End: Complemental strand, 17006 - 16855
Alignment:
Q  432 tactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcc 531  Q
    |||||||||||||| ||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17006 tactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcc 16907  T
Q  532 agaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  16906 agaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 465 - 558
Target Start/End: Original strand, 16564 - 16656
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 120; Significance: 4e-61; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 400 - 583
Target Start/End: Complemental strand, 64847 - 64664
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| |||||  |||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    ||||||||||||| || |||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||| |||||||    
T  64747 atttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttaggcggttttagacctacctctatgct 64664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 64301 - 64462
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    ||||||||||||||||||  |||||||| ||||   |||||||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  64401 ttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 64462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 558
Target Start/End: Complemental strand, 205911 - 205754
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||| |||||    ||||  | |||||||||| ||||||||||  |||  ||  ||||||||  |||| | || |||||| ||| |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    || |||| ||||||| |||||||||||| ||||| ||||||||||||||| |||||||||    
T  205812 cagttttagtcctacgtcctattttcaa-ctccaaaaacgcagagaaatggcagttttag 205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 485 - 558
Target Start/End: Original strand, 205038 - 205110
Alignment:
Q  485 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||| |||||| ||||||||||  ||||||||    
T  205038 tatcatgttttttgcagttttagtcctacctcctattttc-aactctagaaacacagagaaatggaagttttag 205110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 116; Significance: 1e-58; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 436 - 583
Target Start/End: Original strand, 4242 - 4389
Alignment:
Q  436 cacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaa 535  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  536 acgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||    
T  4342 atgcagagaaatgacagttttaggcggttttagacctacccctatgct 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 395 - 558
Target Start/End: Complemental strand, 4754 - 4592
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattttt 494  Q
    |||||||||||||||||||  || ||||| |||||  |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  495 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 111; Significance: 1e-55; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 400 - 558
Target Start/End: Original strand, 42172 - 42330
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||| | |||||| ||||||||| ||||||||||| ||||||| ||||| |||||||||||| |||| |||||||||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttag 42330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 393 - 558
Target Start/End: Complemental strand, 42707 - 42544
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||| ||||||   ||||||| ||||||||||||| ||||||| | ||||||||||| |||||||||||| ||||||||| |||||||||    
T  42707 tttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcattt 42608  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||| |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  42607 ttgtttcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 42544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 105; Significance: 4e-52; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 394 - 558
Target Start/End: Original strand, 4790 - 4953
Alignment:
Q  394 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttt 493  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  494 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  4890 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 399 - 577
Target Start/End: Complemental strand, 5334 - 5160
Alignment:
Q  399 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttg 498  Q
    |||||||||||||||  |||||||| ||||| ||| |||||||||||||| || ||||||| ||||||| |||| |||  ||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  499 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccc 577  Q
    ||||||||||    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||    
T  5234 catttttcgt----cctcctattttcaaactccagaaacgcagaaaaatgacagttttaggcggttttagacttacccc 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 96; Significance: 9e-47; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 400 - 583
Target Start/End: Original strand, 9935 - 10116
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||| ||||  |||||||| ||| | ||| ||||||||||| || ||||||||||  | |||||||||||||||||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttaaacctacccctatgct 583  Q
    | ||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  10035 a-ttttcatcctacctcctattttcaaactcaagaaacg-agagaaatgacaattttaggcggttttaaacatacccctatgct 10116  T

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Target: scaffold0432; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 400 - 557
Target Start/End: Complemental strand, 10414 - 10259
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||  | |||||||| |||||||||||| ||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  500 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    ||||||||||||||| || ||||| |  ||||| |||  |||||||||||||||||||    
T  10314 atttttcgtcctacc-cccatttt-attctccaaaaattcagagaaatgacagtttta 10259  T

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Target: scaffold0019 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 393 - 558
Target Start/End: Complemental strand, 134222 - 134058
Alignment:
Q  393 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcattt 492  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||||||| ||| ||||||||||  ||||||||||| | ||||||||||| |||||    
T  134222 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacattt 134123  T
Q  493 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  134122 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 134058  T

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Target: scaffold0176 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 18834 - 18994
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    |||||| |||||||||||  ||||  || ||||| |||||||||||||||||| |||||||||| |||| ||||||| ||| ||||||||||||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  496 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||| ||||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  18934 ttgcatttttcatcctacc-cccatttt-attctccaaaaacgcagagaaataacagttttag 18994  T

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Target: scaffold0176; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 391 - 494
Target Start/End: Complemental strand, 19172 - 19069
Alignment:
Q  391 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcat 490  Q
    ||||| |||||||||||||||||  |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  19172 atttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 19073  T
Q  491 tttt 494  Q
    ||||    
T  19072 tttt 19069  T

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Target: scaffold1585 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 398 - 522
Target Start/End: Original strand, 568 - 692
Alignment:
Q  398 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgtt 497  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||| || || |||||||||| ||||||||||||  |||||||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  498 gcatttttcgtcctacctcctattt 522  Q
    | ||||||||||  |||||| ||||    
T  668 gtatttttcgtctcacctcccattt 692  T

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Target: scaffold0113 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 511
Target Start/End: Complemental strand, 28789 - 28674
Alignment:
Q  396 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttg 495  Q
    |||| |||||||||||||  || ||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  496 ttgcatttttcgtcct 511  Q
    ||||| ||||||||||    
T  28689 ttgcagttttcgtcct 28674  T

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Target: scaffold0057 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 523
Target Start/End: Complemental strand, 62000 - 61877
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||| || ||||||||||  || ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  500 atttttcgtcctacctcctatttt 523  Q
    ||||||||||||||| || |||||    
T  61900 atttttcgtcctaccccccatttt 61877  T

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Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 471
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  395 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaa 471  Q
    ||||||||| ||||||||| ||||||||| ||||| |||||||||||| || ||||||| ||||| || ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold0076 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 400 - 500
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  400 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgc 499  Q
    ||||||||||||||  || || || ||||||||||| |||||||||||||| |||||||| |||| | ||||| ||||||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  500 a 500  Q
    |    
T  8451 a 8451  T

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Target: scaffold1696 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 419 - 513
Target Start/End: Original strand, 471 - 565
Alignment:
Q  419 tcgtgatttggtctactcacgaaactggtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctac 513  Q
    ||||| ||||| |||||||||||| ||||| ||  |||||| |||| |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  471 tcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgcatttttcgtcctac 565  T

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Target: scaffold0168 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 7784 - 7707
Alignment:
Q  446 gtcctgcccttttacaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 523  Q
    ||||| |||||||| ||||||||||||  ||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt 7707  T

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Target: scaffold0712 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Complemental strand, 6818 - 6777
Alignment:
Q  516 cctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  6818 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 6777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 557
Target Start/End: Original strand, 6460 - 6551
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    ||||||||| |||||| |||||| || ||| ||||| |||| |||||| || ||||||| ||| || |||||||||| ||||||||||||||||    
T  6460 gaacaaaatcgtccttaaattat-atgttttttgcagttttagtcctatcttcctatttccaa-cttcagaaacgcacagaaatgacagtttta 6551  T

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Target: scaffold0709 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 558
Target Start/End: Complemental strand, 6836 - 6795
Alignment:
Q  516 cctattttcaaactccagaaacgcagagaaatgacagttttag 558  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  6836 cctattttcaa-ctccagaaacgcacagaaatgacagttttag 6795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 557
Target Start/End: Original strand, 6478 - 6569
Alignment:
Q  465 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatgacagtttta 557  Q
    ||||||||| |||||| |||||| || ||| ||||| |||| |||||| || ||||||| ||| || |||||||||| ||||||||||||||||    
T  6478 gaacaaaatcgtccttaaattat-atgttttttgcagttttagtcctatcttcctatttccaa-cttcagaaacgcacagaaatgacagtttta 6569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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