View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1291-Insertion-4 (Length: 413)
Name: NF1291-Insertion-4
Description: NF1291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1291-Insertion-4 |
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Alignment Details
Target: chr1 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 8 - 382
Target Start/End: Original strand, 45767307 - 45767682
Alignment:
| Q |
8 |
tcttggacatctccaaatagtgagtaata----gtacactgactttaaacaaatgttctgtttatgattaatagttataatcctggtagtgttagttact |
103 |
Q |
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| T |
45767307 |
tcttggacatctccaaatagtgagtaataaatagtacactgactttaaacaaatgttctgtttatgattaatagttataatcctggtagtgttagttact |
45767406 |
T |
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| Q |
104 |
ctattagtcgagttaggactcaggactaatgtgtacacatttcatatttcagaattaatagaatgaagaagttgatatatacaatgattgtagaatccac |
203 |
Q |
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| T |
45767407 |
ctattagtcgagttaggactcaggactaatgtgtacacatttcatatttcagaattaatagaatgaagaagttg----atacaatgattgtagaatacac |
45767502 |
T |
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| Q |
204 |
tatatataacttctcactgatcataactaacttagcaatcataaacaatattgaattaattctaattattatccaactatatctat-caagcatacaagc |
302 |
Q |
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| T |
45767503 |
tatatataacttctcactgatcataactaacttagcaatcattaacaatattgtattaattctaattattatccaactatatctatccaagcatacaagc |
45767602 |
T |
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| Q |
303 |
atggatctcaaacaacaaattattactttggtccatcatgaataatatatttccatataaagtgaaaaacaataatttta |
382 |
Q |
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| T |
45767603 |
atggatctcaaacaacaaattattactttggtccatcatgaataatatatttacatataaagtgaaaagaaataatttta |
45767682 |
T |
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