View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12910_high_10 (Length: 267)
Name: NF12910_high_10
Description: NF12910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12910_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 21484016 - 21483764
Alignment:
| Q |
1 |
tgtaagtgatgaaatgagtatggttttcttggagtggcttaaatcgaacaaagacagtgtctccgcgaatgatttgaggaatgtgaagcttaagaaatcg |
100 |
Q |
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| T |
21484016 |
tgtaagtgatgaaatgagtatggttttcttggagtggcttaaatcgaacaaagacagtgtctccgcgaatgatttgaggaatgtgaagcttaagaaatca |
21483917 |
T |
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| Q |
101 |
acgatcgaaagtgctgctaggagattaggtggtggaaaagaagggatgaaacaattgttgaagctcattcttgaatgggttcaaactagtcatcttcaca |
200 |
Q |
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| T |
21483916 |
acgattgaaagtgctgctaggagattaggtggtggaaaagaagggatgaaacaattgttgaagctcattcttgaatgggttcaaactagtcatcttcata |
21483817 |
T |
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| Q |
201 |
acaaaagactcaaagaaaacgccaacacgaacacaataataccttcaaatatt |
253 |
Q |
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| T |
21483816 |
acaaaagactcaaagaaaacgccaacacgaacacaataataccttcaaatatt |
21483764 |
T |
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