View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12910_low_14 (Length: 282)
Name: NF12910_low_14
Description: NF12910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12910_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 9 - 266
Target Start/End: Original strand, 39711080 - 39711338
Alignment:
| Q |
9 |
catcatcacctaccaaaattaaaaacactagcatacaattaacaacaatacataattgatggaaacatgtgttgccaaccccatcacccttagtcatcta |
108 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39711080 |
catcaccacctaccaaaattaaaaacactagcatacaattaacaacaatacataattgatggaaacatgtgttgccaaccccatcacccttagtcatcta |
39711179 |
T |
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| Q |
109 |
cgaaacggacacaaaactaaaagcatccctctttcatgctctttcattttcttattactt-ataaaaacctaaataatacaatcatgcaccacacctacc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
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| T |
39711180 |
cgaaacggacacaaaactaaaagcatccctctttcatgctctttcattttcttattacttaaaaaaaacctaaataatacaatcatgcaccacacctacc |
39711279 |
T |
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| Q |
208 |
acacattaacatcaagccgcaatatcatgacgaatgtgtttgagtatcaccggaataac |
266 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39711280 |
acacattaacatcaagccgcaatatcatgacgaatgtgtttgagtatcaccggaataac |
39711338 |
T |
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