View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12913_low_32 (Length: 336)
Name: NF12913_low_32
Description: NF12913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12913_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 7246219 - 7246474
Alignment:
| Q |
1 |
ctaaagtcctggtcataatgagaataagatgttgagtcaaaaaagaggtgatgagtattagcatcttgagtttgaaaatgagaatgatcaaggggtttag |
100 |
Q |
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| T |
7246219 |
ctaaagtccttgtcatcctgagaataagatgttgagtccaaaaagaggtgatgagtagtagcatcttgagtttgaaaatgagaatgatcaagtgggttag |
7246318 |
T |
|
| Q |
101 |
aagaggtaattgattgagagtaatagtaagggtttaaagaagagttttgataggattgtgaaaaagattgtgactgatcatgacaagccatggatgaagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7246319 |
tagaggtaattgattgagagtaatagtaagggtttaaagaagagttttggtaggattgtgaaaaagattgtgactgatcatgacaagccatggatgaagt |
7246418 |
T |
|
| Q |
201 |
agagaaagggaaagaagaaggtgagtttatgctgctgctgttgttgttcaaggaga |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7246419 |
agagaaagggaaagaagaaggtgagtttatgctgctgctgttgttgttcaaggaga |
7246474 |
T |
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